14f2393d30
Update website
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Add apex page and replace bscpkgs references for jungle after the merge.
See: rarias/jungle-website#1
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-22 15:48:13 +02:00
f115d611e7
Add aaguirre user
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-22 15:28:29 +02:00
4261d327c6
Include agenix module and package directly
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Avoids adding an extra flake input only to fetch a single module and
package.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-14 09:37:47 +02:00
4685c36e2f
Add brief documentation on maintainer roles
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-10 16:37:00 +02:00
c6c788f1e2
Add meta to packages
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-10 16:36:56 +02:00
606386d006
Add maintainers
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-10 16:36:38 +02:00
1fba0a14a8
Enable ovni for cross compilation
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-10 12:08:28 +02:00
d6621e939a
Add RISC-V cross-compilation target for CI
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-10 12:08:24 +02:00
67726c1d44
Fix nanos6 cross-compilation for riscv
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-09 15:49:01 +02:00
a971ed6a54
Fix cross compilation for lmbench
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-09 15:49:01 +02:00
06581e455c
Disable papi when cross compiling
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Even if we do an override to papi get the proper configure flags for
cross-compiling, the memory fences are not defined for risc-v:
mb.h:67:2: error: #error Need to define rmb for this architecture!
See: #184
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-09 15:48:45 +02:00
dd7f24f455
Replace __noChroot with requiredSystemFeatures
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-09 11:41:18 +02:00
64e2c39582
Add hwloc test with sys-devices feature
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-09 11:41:06 +02:00
98d17b19d3
Enable custom sys-devices system feature
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-09 11:40:44 +02:00
44cc60fcd8
Update license year range to 2025
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:32 +02:00
ca48ce556c
Update gitlab CI after merge
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:30 +02:00
e8ac9dfb64
Upgrade README after bscpkgs merge
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:28 +02:00
188ba6df0a
Remove bscpkgs input
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:26 +02:00
b1a37ae1fe
Enable unfree packages in nixpkgs config
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:24 +02:00
63822bb054
Move the rest of packages to main overlay
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:23 +02:00
b94a1493d5
Merge flake.nix with bscpkgs
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:21 +02:00
826d6a28ef
Move slurm to pkgs/
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:19 +02:00
ae6b0ae161
Move MPICH to pkgs/mpich and set as default
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:01 +02:00
01986c376b
Merge remote-tracking branch 'bscpkgs/master' into merge-bscpkgs
2025-10-03 13:47:04 +02:00
e42058f08b
Allow access to hut from fox
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-02 17:03:21 +02:00
f3bfe89f27
Fetch website from its own git repository
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-02 15:45:21 +02:00
ee6f981006
Add script to trim the repository
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-02 15:44:56 +02:00
92ee4a09d7
Rename test to tests and tests to testList
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:53:09 +02:00
34f4b6aa37
Move bsc-ci test into let
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:33 +02:00
2f2d6cbea8
Rework bsc-ci
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:31 +02:00
69b09b6dda
Add riscv64 cross compilation to bsc-ci and hydra
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:29 +02:00
a737d725ed
Put helper attrs of ompss2 drv to passthru
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:28 +02:00
6c1d1f3b2b
Remove gcc from tampi *buildInputs
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:26 +02:00
f338ef47d5
Fix strictDeps ovni
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:25 +02:00
239e84c40c
Fix strictDeps osu
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:23 +02:00
ed820e79f8
Fix strictDeps mercurium
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:22 +02:00
afeb415c98
Fix strictDeps tampi
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:20 +02:00
256b24b97b
Fix strictDeps sonar
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:18 +02:00
492f73b600
Fix strictDeps nanos6
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:17 +02:00
76ddd85afe
Fix strictDeps paraver
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:15 +02:00
7affb8ef4b
Fix strictDeps ompss2
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:13 +02:00
4ba823e5b7
Fix strictDeps intel 2023
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:11 +02:00
51eecde59e
Fix strictDeps bench6
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:08 +02:00
9eb5c486ba
Fix strictDeps bigotes
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:43:58 +02:00
5df49dcfab
Add gitea CI configuration
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Builds the .#bsc-ci.all target on each PR. Causes all packages to be
built in hut, populating the nix cache.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 14:59:25 +02:00
b040bebd1d
Add acinca user
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-01 12:27:43 +02:00
f69629d2da
Restart slurmd on failure
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A failure to reach the control node can cause slurmd to fail and the
unit remains in the failed state until is manually restarted. Instead,
try to restart the service every 30 seconds, forever:
owl1% systemctl show slurmd | grep -E 'Restart=|RestartUSec='
Restart=on-failure
RestartUSec=30s
owl1% pgrep slurmd
5903
owl1% sudo kill -SEGV 5903
owl1% pgrep slurmd
6137
Fixes: #177
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-30 17:20:39 +02:00
0668f0db74
Lower connect timeout when using hut substituter
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-09-29 18:44:48 +02:00
5fcd57a061
Use hut substituter in all nodes
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-09-29 18:44:38 +02:00
ad1544759f
Remove machine access for user csiringo
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-09-29 18:23:24 +02:00
2ffdd53d86
Add hydraJobs with tests and packages
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-09-26 16:12:46 +02:00
e1c950a530
Mount apex /home via NFS in raccoon
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-26 12:28:53 +02:00
f9632c37f8
Remove extra SSH jump configuration
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We now have direct visibility among nodes so we don't need any extra
SSH configuration to reach them.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-26 12:28:51 +02:00
1f0cb4ae76
Add raccoon peer to wireguard
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It routes traffic from fox, apex and the compute nodes so that we can
reach the git servers and tent.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-26 12:28:48 +02:00
d49d078bed
Add raccoon host key
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-26 12:28:46 +02:00
e98fdb89ab
Restrict fox peer to a single IP
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-26 12:28:43 +02:00
6afe05b5fd
Use lowercase peer hostnames
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-26 12:28:25 +02:00
7d5aebf882
Share a public folder for documents
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:59:40 +02:00
94cbfd38a6
Fix AMDuProfPcm so it finds libnuma.so
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We change the search procedure so it detects NixOS from /etc/os-release
and uses "libnuma.so" when calling dlopen, instead of harcoding a full
path to /usr. The full patch of libnuma is stored in the runpath, so
dlopen can find it.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Tested-by: Vincent Arcila <vincent.arcila@bsc.es>
2025-09-19 10:54:36 +02:00
4da7780472
Add amd_hsmp module in fox for AMD uProf
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:54:24 +02:00
a6dfc267fd
Fix hidden dependencies for AMDuProfSys
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It tries to dlopen libcrypt.so.1 and libstdc++.so.6, so we make sure
they are available by adding them to the runpath.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:54:19 +02:00
d6126501ba
Disable NMI watchdog in fox
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:54:17 +02:00
ac0deb47b6
Fix amd-uprof dependencies with patchelf
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:54:15 +02:00
f7d676de77
Fix hrtimer new interface
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The hrtimer_init() is now done via hrtimer_setup() with the callback
function as argument.
See: https://lwn.net/Articles/996598/
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:54:09 +02:00
cf1db201b2
Use CFLAGS_MODULE instead of EXTRA_CFLAGS
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Fixes the build in Linux 6.15.6, as it was not able to find the include
files.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:54:07 +02:00
e6e4846529
Add AMD uProf module and enable it in fox
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:54:05 +02:00
084d556c56
Add AMD uProf package and driver
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:53:49 +02:00
c7b5ec13b8
Provide nixpkgs.lib in bscpkgs outputs
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Currently, we can use bscpkgs similarly to nixpkgs either through
the flake outputs or with import bscpkgs:
```nix
# currently supported:
bscpkgs.legacyPackages.x86_64-linux.hello
let pkgs = import bscpkgs { system = "x86_64-linux"; }; in pkgs.hello
```
The missing piece is nixpkgs.lib (not pkgs.lib, the system agnostic
one). The workaround is to do bscpkgs.inputs.nixpkgs.lib instead. We can
simplify this by forwarding the lib to our outputs.
This enables us to use bscpkgs as a drop-in
replacing the inputs to our flake from nixpkgs to bscpkgs.
(inputs.nixpkgs.url = "<*BSC*pkgs url>").
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Aleix Boné <abonerib@bsc.es>
2025-09-12 14:28:42 +02:00
00dfe801f4
Fix GPI-2 and enable TAGASPI
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The rdma-core driver.h include is no longer installed:
56dd87acd2
So ibv_read_sysfs_file() is not defined. As the symbols is still
distributed, we simply add the missing prototype manually.
Similarly, the gaspi_get_system_mem() function is not available from the
gaspi public headers, so we define it in the max_mem.c test.
Fixes: rarias/bscpkgs#7
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-09-12 14:21:00 +02:00
ff0fc18d0a
Mount home via NFS from apex in fox
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Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 15:34:02 +02:00
19c7e32678
Allow access to NFS via wireguard subnet
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Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 15:33:47 +02:00
017c19e7d0
Use 10.106.0.0/24 subnet to avoid collisions
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The 106 byte is the code for 'j' (jungle) in ASCII:
% printf j | od -t d
0000000 106
0000001
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:03:13 +02:00
a36eff8749
Revert "Remove pam_slurm_adopt from fox"
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This reverts commit 1eac0fcad8211195499bc566e6c70312b31af700.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:03:06 +02:00
df17b11458
Enable fail2ban in fox
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Protect fox against ssh bruteforce attacks:
fox% sudo lastb | head
root ssh:notty 200.124.28.102 Mon Sep 1 11:25 - 11:25 (00:00)
root ssh:notty 200.124.28.102 Mon Sep 1 11:25 - 11:25 (00:00)
root ssh:notty 200.124.28.102 Mon Sep 1 11:25 - 11:25 (00:00)
root ssh:notty 200.124.28.102 Mon Sep 1 11:25 - 11:25 (00:00)
root ssh:notty 200.124.28.102 Mon Sep 1 11:25 - 11:25 (00:00)
root ssh:notty 200.124.28.102 Mon Sep 1 11:25 - 11:25 (00:00)
root ssh:notty 200.124.28.102 Mon Sep 1 11:25 - 11:25 (00:00)
root ssh:notty 200.124.28.102 Mon Sep 1 11:25 - 11:25 (00:00)
root ssh:notty 200.124.28.102 Mon Sep 1 11:24 - 11:24 (00:00)
root ssh:notty 200.124.28.102 Mon Sep 1 11:24 - 11:24 (00:00)
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:03:02 +02:00
0dc7b7eb3d
Accept connections from apex to fox slurmd
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Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:03:00 +02:00
dff6eaf587
Accept fox connection to slurm controller
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Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:02:59 +02:00
4b6b67b587
Add fox machine to SLURM
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Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:02:57 +02:00
20e7d244d1
Rekey secrets with trusted fox key
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Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:02:55 +02:00
c5d3b8e7f0
Trust fox for compute node secrets
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Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:02:52 +02:00
6bbfb0d124
Make apex host specific to each machine
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Allows direct contact via the VPN when accessing from fox, but use
Internet when using the rest of the machines.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:02:49 +02:00
46d03d5ca7
Add local host fox in apex
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Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:02:46 +02:00
e366e6ce87
Enable wireguard in apex
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Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:02:43 +02:00
e415f70bbb
Add wireguard server in fox
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Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:02:38 +02:00
200c727bbf
Use writeShellScript for suspend.sh and resume.sh
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-08-29 12:35:28 +02:00
7413021440
Add firewall rules to slurm server
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-08-29 12:35:26 +02:00
20b4805335
Remove hut from slurm
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-08-29 12:35:24 +02:00
f7dff9deab
Only configure apex as slurm server
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-08-29 12:35:22 +02:00
f569933732
Split slurm configuration for client and server
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-08-29 12:35:20 +02:00
ee895d2e4f
Move slurm control server to apex
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-08-29 12:35:16 +02:00
5ee8623af2
Fix typo in csiringo ssh key
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-08-27 17:44:20 +02:00
a0e4b209b0
Enable nix-ld in weasel
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-08-27 16:19:34 +02:00
ce25867421
Add csiringo user with access to apex and weasel
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-08-27 16:02:26 +02:00
f89bba35a6
Access gitlab via raccoon in fox
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Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-08-27 15:27:38 +02:00
2c8d7ed855
Build nOS-V with PAPI support
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To support the new instrumentation for HWC it would be useful to already
build nOS-V with PAPI support enabled. The enablePapi switch allows it
to be disabled with `nosv.override { enablePapi = false; }`.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-08-01 13:12:48 +02:00
d591721a61
Move StartLimit* options to unit section
...
The StartLimitBurst and StartLimitIntervalSec options belong to the
[Unit] section, otherwise they are ignored in [Service]:
> Unknown key 'StartLimitIntervalSec' in section [Service], ignoring.
When using [Unit], the limits are properly set:
apex% systemctl show power-policy.service | grep StartLimit
StartLimitIntervalUSec=10min
StartLimitBurst=10
StartLimitAction=none
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-24 14:32:46 +02:00
343b4f155e
Set power policy to always turn on
...
In all machines, as soon as we recover the power, turn the machine back
on. We cannot rely on the previous state as we will shut them down
before the power is cut to prevent damage on the power supply
monitoring circuit.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-24 11:22:38 +02:00
39a211a846
Add NixOS module to control power policy
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-24 11:22:36 +02:00
142985c505
Move August shutdown to 3rd at 22h
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-24 11:22:33 +02:00
3f3dc2d037
Disable automatic August shutdown for Fox
...
The UPC has different dates for the yearly power cut, and Fox can
recover properly from a power loss, so we don't need to have it turned
off before the power cut. Simply disabling the timer is enough.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-24 11:22:10 +02:00
3269d763aa
Add cudainfo program to test CUDA
...
The cudainfo program checks that we can initialize the CUDA RT library
and communicate with the driver. It can be used as standalone program or
built with cudainfo.gpuCheck so it is executed inside the build sandbox
to see if it also works fine. It uses the autoAddDriverRunpath hook to
inject in the runpath the location of the library directory for CUDA
libraries.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-23 11:52:09 +02:00
f2d8ee8552
Add missing symlink in cuda sandbox
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-23 11:51:47 +02:00
8d984a0672
Enable cuda systemFeature in raccoon and fox
...
This allows running derivations which depend on cuda runtime without
breaking the sandbox. We only need to add `requiredSystemFeatures = [ "cuda" ];`
to the derivation.
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-07-22 17:07:13 +02:00
f3733418b2
Move shared nvidia settings to a separate module
...
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-07-22 17:06:45 +02:00
1666c14a35
Remove dependency on wx from paraver kernel
...
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-07-22 13:00:23 +02:00
b29f03ba6e
Fix boost >=1.87 in wxparaver
...
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-07-22 12:59:53 +02:00
ae2ef1d2df
Add patch to paraver to prevent focus stealing
...
See: https://github.com/bsc-performance-tools/wxparaver/issues/18
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-07-22 12:59:39 +02:00
9a48ae45bb
Update paraver to 4.12.0
...
Adds a new patch to fix libxml2: the m4 AM_PATH_XML2 macro has been
deprecated and is no longer included in the latest nixpkgs unstable.
Upstream recommends using `PKG_CHECK_MODULES` instead.
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-07-22 12:57:33 +02:00
ce8b05b142
Replace xeon07 by hut in ssh config
...
The xeon07 machine has been renamed to hut.
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-07-21 18:10:08 +02:00
974bb56dc3
Fix lmbench build issues with GCC 14
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-07-21 18:01:36 +02:00
88d4d8e317
Drop tagaspi from bench6
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-21 18:01:20 +02:00
885e04e446
Remove unused inputs from intel compiler 2023
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-21 18:00:39 +02:00
4a5787e0c6
Enable automatic Nix GC in raccoon
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-21 17:58:26 +02:00
6c11093033
Select proprietary NVIDIA driver in raccoon
...
The NVIDIA GTX 960 from 2016 has the Maxwell architecture, and NixOS
suggests using the proprietary driver for older than Turing:
> It is suggested to use the open source kernel modules on Turing or
> later GPUs (RTX series, GTX 16xx), and the closed source modules
> otherwise.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-21 17:58:21 +02:00
26f52aa27d
Use gcc 13 for intel compiler 2023
...
Intel compiler for C++ (icpc) is not able to parse the location of C++
headers from the output of gcc 14, but works fine for gcc 13.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-21 17:23:30 +02:00
52fe43bfe1
Fix PATH in intel compiler wrapper
...
We need to add the gcc in the PATH, but adding it directly to $PATH
doesn't work, as it will be restored to $path_backup before icc runs. So
for now we simply inject it to path_backup, but ideally we should find a
more robust solution.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-21 17:23:30 +02:00
f0637b4569
Drop GPI-2 and TAGASPI
...
GPI-2 fails to build, which is needed for TAGASPI.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-21 17:23:30 +02:00
6ddfea0a3a
Use boost 1.86 for paraver
...
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-07-21 17:23:30 +02:00
e7adef1ffa
Fix intel-compiler by ignoring broken symlinks
...
In the future, we may want to look if those symlinks are needed.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-21 17:23:30 +02:00
e82d3c3b9f
Upgrade OmpSs-2 LLVM to 2025.06
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-21 17:23:30 +02:00
4442b6a706
Update TAMPI to 4.1
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-21 17:23:30 +02:00
2d0b014dc7
Update Nanos6 to 4.3
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-21 17:23:30 +02:00
867ba3ec5a
Update nOS-V to 3.2.0
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-21 17:23:30 +02:00
2cacc2b265
Update ovni to 1.12.0
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-21 17:23:30 +02:00
e4abd8d8f6
flake.lock: Update
...
Flake lock file updates:
• Updated input 'nixpkgs':
'path:/nix/store/2csx2kkb2hxyxhhmg2xs9jfyypikwwk6-source?lastModified=1736867362&narHash=sha256-i/UJ5I7HoqmFMwZEH6vAvBxOrjjOJNU739lnZnhUln8%3D&rev=9c6b49aeac36e2ed73a8c472f1546f6d9cf1addc' (2025-01-14)
→ 'path:/nix/store/zk8v61cpk1wprp9ld5ayc1g5fq4pdkwv-source?lastModified=1752436162&narHash=sha256-Kt1UIPi7kZqkSc5HVj6UY5YLHHEzPBkgpNUByuyxtlw%3D&rev=dfcd5b901dbab46c9c6e80b265648481aafb01f8' (2025-07-13)
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-21 17:23:30 +02:00
750504744f
Enable open source NVidia driver in fox
...
It is recommended for newer versions.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-18 09:57:38 +02:00
c26ec1b6f1
Remove option allowUnfree from fox and raccoon
...
It is already set to true for all machines.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-18 09:57:21 +02:00
2ef32f773c
Ban another scanner trying to connect via SSH
...
It is constantly spamming out logs:
apex# journalctl | grep 'Connection closed by 84.88.52.176' | wc -l
2255
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-18 09:51:49 +02:00
fc9fcd602a
Update weasel IPMI hostname for monitoring
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-18 09:51:21 +02:00
0e37ab5fe1
Remove merged MPICH patch
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-07-16 13:07:12 +02:00
a1b387e454
Remove package ix as it is gone
...
Fails with: "error: ix has been removed from Nixpkgs, as the ix.io
pastebin has been offline since Dec. 2023".
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-07-16 13:07:06 +02:00
380abe9957
flake.lock: Update
...
Flake lock file updates:
• Updated input 'agenix':
'github:ryantm/agenix/f6291c5935fdc4e0bef208cfc0dcab7e3f7a1c41?narHash=sha256-b%2Buqzj%2BWa6xgMS9aNbX4I%2BsXeb5biPDi39VgvSFqFvU%3D' (2024-08-10)
→ 'github:ryantm/agenix/531beac616433bac6f9e2a19feb8e99a22a66baf?narHash=sha256-9P1FziAwl5%2B3edkfFcr5HeGtQUtrSdk/MksX39GieoA%3D' (2025-06-17)
• Updated input 'agenix/darwin':
'github:lnl7/nix-darwin/4b9b83d5a92e8c1fbfd8eb27eda375908c11ec4d?narHash=sha256-gzGLZSiOhf155FW7262kdHo2YDeugp3VuIFb4/GGng0%3D' (2023-11-24)
→ 'github:lnl7/nix-darwin/43975d782b418ebf4969e9ccba82466728c2851b?narHash=sha256-dyN%2BteG9G82G%2Bm%2BPX/aSAagkC%2BvUv0SgUw3XkPhQodQ%3D' (2025-04-12)
• Updated input 'agenix/home-manager':
'github:nix-community/home-manager/3bfaacf46133c037bb356193bd2f1765d9dc82c1?narHash=sha256-7ulcXOk63TIT2lVDSExj7XzFx09LpdSAPtvgtM7yQPE%3D' (2023-12-20)
→ 'github:nix-community/home-manager/abfad3d2958c9e6300a883bd443512c55dfeb1be?narHash=sha256-YZCh2o9Ua1n9uCvrvi5pRxtuVNml8X2a03qIFfRKpFs%3D' (2025-04-24)
• Updated input 'bscpkgs':
'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=6782fc6c5b5a29e84a7f2c2d1064f4bcb1288c0f ' (2024-11-29)
→ 'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=9d1944c658929b6f98b3f3803fead4d1b91c4405 ' (2025-06-11)
• Updated input 'nixpkgs':
'github:NixOS/nixpkgs/9c6b49aeac36e2ed73a8c472f1546f6d9cf1addc?narHash=sha256-i/UJ5I7HoqmFMwZEH6vAvBxOrjjOJNU739lnZnhUln8%3D' (2025-01-14)
→ 'github:NixOS/nixpkgs/dfcd5b901dbab46c9c6e80b265648481aafb01f8?narHash=sha256-Kt1UIPi7kZqkSc5HVj6UY5YLHHEzPBkgpNUByuyxtlw%3D' (2025-07-13)
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-07-16 13:07:01 +02:00
37c12783bb
Upgrade nixpkgs to nixos 25.05
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-07-16 13:06:40 +02:00
7379e84e79
Silently ban OpenVAS BSC scanner from apex
...
It is spamming our logs with refused connection lines:
apex% sudo journalctl -b0 | grep 'refused connection.*SRC=192.168.8.16' | wc -l
13945
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 17:40:41 +02:00
b802f88df9
Rotate anavarro password and SSH key
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 17:24:41 +02:00
bd94c4ad00
Add weasel machine configuration
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 17:24:38 +02:00
570c6e175d
Remove extra flush commands on firewall stop
...
They are not needed as they are already flushed when the firewall
starts or stops.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:45 +02:00
96661dd0d4
Prevent accidental use of nftables
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:42 +02:00
28db7799ea
Add proxy configuration for internal hosts
...
Access internal hosts via apex proxy. From the compute nodes we first
open an SSH connection to apex, and then tunnel it through the HTTP
proxy with netcat.
This way we allow reaching internal GitLab repositories without
requiring the user to have credentials in the remote host, while we can
use multiple remotes to provide redundancy.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:36 +02:00
508059c99e
Remove unused blackbox configuration modules
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:30 +02:00
b9f9cc7d7a
Use IPv4 in blackbox probes
...
Otherwise they simply fail as IPv6 doesn't work.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:26 +02:00
eae0c7cb59
Make NFS mount async to improve latency
...
Don't wait to flush writes, as we don't care about consistency on a
crash:
> This option allows the NFS server to violate the NFS protocol and
> reply to requests before any changes made by that request have been
> committed to stable storage (e.g. disc drive).
>
> Using this option usually improves performance, but at the cost that
> an unclean server restart (i.e. a crash) can cause data to be lost or
> corrupted.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:20 +02:00
2280635cd6
Disable root_squash from NFS
...
Allows root to read files in the NFS export, so we can directly run
`nixos-rebuild switch` from /home.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:16 +02:00
16ada09600
Remove SSH proxy to access BSC clusters
...
We now have direct connection to them.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:13 +02:00
0d291d715c
Add users to apex machine
...
They need to be able to login to apex to access any other machine from
the SSF rack.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:09 +02:00
66001f76f7
Remove proxy from hut HTTP probes
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:04 +02:00
1e3b85067d
Remove proxy configuration from environment
...
All machines have now direct connection with the outside world.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:00 +02:00
36ee1f3adc
Add storcli utility to apex
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:17:57 +02:00
25e9c071b0
Add new configuration for apex
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:17:43 +02:00
80cee2dbd0
Add pmartin1 user with access to fox
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-03 11:16:43 +02:00
ee92934c74
Add access to fox for rpenacob user
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 16:58:53 +02:00
db0f3fed91
Revert "Only allow Vincent to access fox for now"
...
This reverts commit e9e3704b677baed1649583f25e4e1bc050a9534e.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 16:58:49 +02:00
adeaa0484d
Add all terminfo files in environment
...
Fixes problems with the kitty terminal when opening vim or kakoune.
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-07-02 16:02:45 +02:00
815810830e
Monitor Fox BMC with ICMP probes too
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:51:22 +02:00
7a52e1907c
Restrict DAC VPN to fox-ipmi machine only
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:51:19 +02:00
22a2e1b9e8
Monitor fox via VPN
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:51:16 +02:00
f29461ae32
Add OpenVPN service to connect to fox BMC
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:51:13 +02:00
208197f099
Add ac.upc.edu as name search server
...
Allows referring to fox.ac.upc.edu directly as fox.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:51:09 +02:00
479ca1b671
Disable kptr_restrict in fox
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:08:42 +02:00
40529fbdcb
Disable NUMA balancing in fox
...
See: https://www.kernel.org/doc/html/latest/admin-guide/sysctl/kernel.html#numa-balancing
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:08:02 +02:00
9b0d3fb21e
Load amd_uncore module in fox
...
Needed for L3 events in perf.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:07:58 +02:00
d8444131d8
Enable SSH X11 forwarding
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:07:54 +02:00
af540456a6
Disable registration in Gitea
...
Get rid of all the spam accounts they are trying to register.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:18 +02:00
42d6734da8
Enable msmtp configuration in tent
...
Allows gitea to send notifications via email.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:15 +02:00
071a8084a0
Add GitLab runner with debian docker for PM
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:13 +02:00
24a0c58592
Monitor nix-daemon in tent
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:11 +02:00
810a6dfcec
Move nix-daemon exporter to modules
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:09 +02:00
47ad89dee1
Add p service for pastes
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:07 +02:00
8af1b259f5
Enable public-inbox service in tent
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:06 +02:00
560003d4fd
Enable gitea in tent
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:04 +02:00
68ff45075c
Add bsc.es to resolve domain names
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:02 +02:00
fc68d16197
Monitor AXLE machine too
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:00 +02:00
f6ec1293f4
Use IPv4 for blackbox exporter
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:59 +02:00
4feeff978c
Add public html files to tent
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:57 +02:00
7b19292912
Add docker GitLab runner for BSC GitLab
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:55 +02:00
0627db0eb9
Add GitLab shell runner in tent for PM
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:54 +02:00
ae2f6dde41
Enable jungle robot emails for Grafana in tent
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:52 +02:00
3bf70656dc
Add tent key for nix-serve
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:50 +02:00
1cf989d727
Remove jungle nix cache from tent
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:48 +02:00
19f734e622
Enable nix cache
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:47 +02:00
d6e3d9626c
Serve Grafana from subpath
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:45 +02:00
9c32e42dcc
Add nginx server in tent
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:43 +02:00
61e6d3232b
Add monitoring in tent
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:00 +02:00
a87b99d0a4
Update bench6 package to bf29a531
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-16 15:34:35 +02:00
43d32ac16d
Use nixpkgs from flake.lock and support attrs when importing bscpkgs
...
This makes `nix-build` and friends use the current flake lock instead of
the outdated pinned version we had in `./nixpkgs.nix`
With this, `nix-build -A ovni` and `nix build .#ovni` should produce the
same result.
This will fail if the flake nixpkgs input does not come from NixOS/nixpkgs.
We could use edolstra/flake-compat instead, but it's overkill imho.
Additionally, I made default.nix behave like nixpkgs, so that we can
import bscpkgs à la nixpkgs (Apply overlays and other options that nixpkgs
accepts):
```nix
let pkgs = import bscpkgs { inherit system; }; in <...>
```
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-06-16 12:29:55 +02:00
d0fd8cde46
Disable nix garbage collector in tent
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-06-11 16:05:05 +02:00
5223ea53f6
Rekey secrets with tent keys
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:04:20 +02:00
253426ce00
Add tent host key and admin keys
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:04:16 +02:00
df67b6cd26
Create directories in /vault/home for tent users
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:04:12 +02:00
766da21097
Add software RAID in tent using 3 disks
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:04:10 +02:00
18461c0d59
Add access to tent to all hut users too
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:04:06 +02:00
028b151c78
Add hut SSH configuration from outside SSF LAN
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:04:04 +02:00
7176b066bb
Don't use proxy in base preset
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:04:00 +02:00
c3c3614f63
Add tent machine from xeon04
...
We moved the tent machine to the server room in the BSC building and is
now directly connected to the raccoon via NAT.
Fixes: #106
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:03:54 +02:00
e13288fc29
Create specific SSF rack configuration
...
Allow xeon machines to optionally inherit SSF configuration such as the
NFS mount point and the network configuration.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:03:49 +02:00
9d1944c658
Upgrade and fix lmbench package
...
Now it needs libtirpc to provide rpc/rpc.h, as it seems it is gone from
libc. We also fix the install target so it installs the additional
benchmarks.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Tested-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:01:40 +02:00
e9e3704b67
Only allow Vincent to access fox for now
...
Needed to run benchmarks without interference.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 12:08:57 +02:00
7d3c7342ae
Use performance governor in fox
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 12:08:55 +02:00
8f80ed2cce
Add hut as nix cache in fox
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 12:08:51 +02:00
d00f996f59
Use extra- for substituters and trusted-public-keys
...
From the nix manual:
> A configuration setting usually overrides any previous value. However,
> for settings that take a list of items, you can prefix the name of the
> setting by extra- to append to the previous value.
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-06-11 11:27:37 +02:00
e40fd24f26
Use DHCP for Ethernet in fox
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 10:24:53 +02:00
83efd6c876
Use UPC time servers as others are blocked
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 10:24:47 +02:00
f0c4206ab8
Create tracing group and add arocanon in raccoon
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 11:09:41 +02:00
8b43a6ffb6
Extend perf support in raccoon
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 11:09:30 +02:00
2bca10b0e4
Enable nixdebuginfod in raccoon
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:50:01 +02:00
eec3e27d66
Make raccoon use performance governor
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:45:35 +02:00
e51ef52721
Enable binfmt emulation in raccoon
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:45:33 +02:00
9dc67d402f
Disable nix garbage collector in raccoon
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:45:31 +02:00
62ec4e014a
Add dbautist user to raccoon machine
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:45:28 +02:00
4d03842f7c
Add node exporter monitoring in raccoon
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:45:26 +02:00
8fedc5518e
Allow X11 forwarding via SSH
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:45:23 +02:00
43dc336638
Enable linger for user rarias
...
Allows services to run without a login session.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:45:19 +02:00
2b08fcd21a
Only proxy SSH git remotes via hut in xeon
...
Other machines like raccoon have direct access.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:44:31 +02:00
557618d43f
Add machine map file
...
Documents the location, board and serial numbers so we can track the
machines if they move around. Some information is unkown.
Using the Nix language to encode the machines location and properties
allows us to later use that information in the configuration of the
machines themselves.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 14:55:58 +02:00
e8ac6cf0f3
Remove fox monitoring via IPMI
...
We will need to setup an VPN to be able to access fox in its new
location, so for now we simply remove the IPMI monitoring.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:53 +02:00
f8fc391cae
Monitor fox, gateway and UPC anella via ICMP
...
Fox should reply once the machine is connected to the UPC network.
Monitoring also the gateway and UPC anella allows us to estimate if the
whole network is down or just fox.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:51 +02:00
6c1afa3fd8
Update configuration for UPC network
...
The fox machine will be placed in the UPC network, so we update the
configuration with the new IP and gateway. We won't be able to reach hut
directly so we also remove the host entry and proxy.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:48 +02:00
008584b465
Disable home via NFS in fox
...
It won't be accesible anymore as we won't be in the same LAN.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:46 +02:00
a22c862192
Rekey all secrets
...
Fox is no longer able to use munge or ceph, so we remove the key and
rekey them.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:44 +02:00
cd0c070439
Rotate fox SSH host key
...
Prevent decrypting old secrets by reading the git history.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:42 +02:00
201ff64b25
Distrust fox SSH key
...
We no longer will share secrets with fox until we can regain our trust.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:38 +02:00
9bee145e25
Remove Ceph module from fox
...
It will no longer be accesible from the UPC.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:36 +02:00
4528b7c2a6
Remove fox from SLURM
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:20 +02:00
1eac0fcad8
Remove pam_slurm_adopt from fox
...
We no longer will be able to use SLURM from jungle.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:02 +02:00
8e5b2dc5cc
Fix C runtime objects path in OmpSs-2 LLVM
...
Some gcc versions append an extension to the patch version number, but
this extension is not part of the installation path. This patch removes
the extension to the patch version.
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-06-02 08:58:19 +02:00
f89cd4d7e2
Remove dangling libomp.so symlink
...
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-06-02 08:57:23 +02:00
dd15f9c943
Add UPC temperature sensor monitoring
...
These sensors are part of their air quality measurements, which just
happen to be very close to our server room.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-05-29 13:01:37 +02:00
4048b3327a
Add meteocat exporter
...
Allows us to track ambient temperature changes and estimate the
temperature delta between the server room and exterior temperature.
We should be able to predict when we would need to stop the machines due
to excesive temperature as summer approaches.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-05-29 13:01:29 +02:00
f4229e34f6
Add custom nix-daemon exporter
...
Allows us to see which derivations are being built in realtime. It is a
bit of a hack, but it seems to work. We simply look at the environment
of the child processes of nix-daemon (usually bash) and then look for
the $name variable which should hold the current derivation being
built. Needs root to be able to read the environ file of the different
nix-daemon processes as they are owned by the nixbld* users.
See: https://discourse.nixos.org/t/query-ongoing-builds/23486
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-05-29 12:57:07 +02:00
5208a3483b
Set keep-outputs to true in all machines
...
From the documentation of keep-outputs, setting it to true would prevent
the GC from removing build time dependencies:
If true, the garbage collector will keep the outputs of non-garbage
derivations. If false (default), outputs will be deleted unless they are
GC roots themselves (or reachable from other roots).
In general, outputs must be registered as roots separately. However,
even if the output of a derivation is registered as a root, the
collector will still delete store paths that are used only at build time
(e.g., the C compiler, or source tarballs downloaded from the network).
To prevent it from doing so, set this option to true.
See: https://nix.dev/manual/nix/2.24/command-ref/conf-file.html#conf-keep-outputs
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-04-22 17:27:37 +02:00
92eacfad20
Add raccoon node exporter monitoring
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-22 14:50:08 +02:00
80309d107b
Increase data retention to 5 years
...
Now that we have more space, we can extend the retention time to 5 years
to hold the monitoring metrics. For a year we have:
# du -sh /var/lib/prometheus2
13G /var/lib/prometheus2
So we can expect it to increase to about 65 GiB. In the future we may
want to reduce some adquisition frequency.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-22 14:50:03 +02:00
d0f151595f
Don't forward any docker traffic
...
Access to the 23080 local port will be done by applying the INPUT rules,
which pass through nixos-fw.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-15 14:16:15 +02:00
93f8d3aa89
Allow traffic from docker to enter port 23080
...
Before:
hut% sudo docker run -it --rm alpine /bin/ash -xc 'true | nc -w 3 -v 10.0.40.7 23080'
+ true
+ nc -w 3 -v 10.0.40.7 23080
nc: 10.0.40.7 (10.0.40.7:23080): Operation timed out
After:
hut% sudo docker run -it --rm alpine /bin/ash -xc 'true | nc -w 3 -v 10.0.40.7 23080'
+ true
+ nc -w 3 -v 10.0.40.7 23080
10.0.40.7 (10.0.40.7:23080) open
Fixes: #94
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-15 14:16:10 +02:00
d84645f3e1
Add bscpm04.bsc.es SSH host and public key
...
Allows fetching repositories from hut and other machines in jungle
without the need to do any extra configuration.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-15 14:15:45 +02:00
55b71d6901
Use hut nix cache in owl1, owl2 and raccoon
...
For owl1 and owl2 directly connect to hut via LAN with HTTP, but for
raccoon pass via the proxy using jungle.bsc.es with HTTPS. There is no
risk of tampering as packages are signed.
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-04-15 14:08:17 +02:00
89c65ea578
Clean all iptables rules on stop
...
Prevents the "iptables: Chain already exists." error by making sure that
we don't leave any chain on start. The ideal solution is to use
iptables-restore instead, which will do the right job. But this needs to
be changed in NixOS entirely.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-15 14:08:14 +02:00
129273e8d8
Make nginx listen on all interfaces
...
Needed for local hosts to contact the nix cache via HTTP directly.
We also allow the incoming traffic on port 80.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-15 14:08:07 +02:00
fdac196c6c
Fix nginx /cache regex
...
`nix-serve` does not handle duplicates in the path:
```
hut$ curl http://127.0.0.1:5000/nix-cache-info
StoreDir: /nix/store
WantMassQuery: 1
Priority: 30
hut$ curl http://127.0.0.1:5000//nix-cache-info
File not found.
```
This meant that the cache was not accessible via:
`curl https://jungle.bsc.es/cache/nix-cache-info ` but
`curl https://jungle.bsc.es/cachenix-cache-info ` worked.
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-04-15 14:08:04 +02:00
3f4b4fb810
Add new GitLab runner for gitlab.bsc.es
...
It uses docker based on alpine and the host nix store, so we can perform
builds but isolate them from the system.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:41:18 +02:00
2c7211ffa3
Remove SLURM partition all
...
We no longer have homogeneous nodes so it doesn't make much sense to
allocate a mix of them.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:27 +02:00
18f25307ab
Add varcila user to hut and fox
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:25 +02:00
7c55d10ceb
Adjust fox slurm config after disabling SMT
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:23 +02:00
5c549faaa8
Add abonerib user to fox
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:21 +02:00
9fd35a9ce4
Don't move doc in web output
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:19 +02:00
5487a93972
Reject SSH connections without SLURM allocation
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:15 +02:00
fe16ea373f
Add users to fox
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:13 +02:00
163434af09
Add dalvare1 user
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:11 +02:00
71164400d4
Mount NVME disks in /nvme{0,1}
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:06 +02:00
f887dacdea
Exclude fox from being suspended by slurm
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:04 +02:00
4f5c8dbbaf
Use IPMI host names instead of IP addresses
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:01 +02:00
14b192b1d9
Add fox IPMI monitoring
...
Use agenix to store the credentials safely.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:14:59 +02:00
2b04812320
Add new fox machine
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:14:42 +02:00
f962816eab
Update PM gitlab URL to new server bscpm04.bsc.es
...
The old server has died, so we move to the new URL at bscpm04.bsc.es.
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-03-07 15:21:11 +01:00
c4583f787d
Fix Nanos6 build from git
...
The src.rev attribute is not available as it comes from source before
the recursive operator. Instead, simply get it from the function inputs.
Cc: Aleix Boné <aleix.boneribo@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-02-28 13:36:00 +01:00
22e40db034
Add explicit zlib dependency
...
The stdenv no longer provides it by default.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-01-22 16:05:52 +01:00
501f11a8e5
Merge outputs of MPI in a single directory
...
Some MPI implementations now have their headers in the dev output as
well as the mpicc wrappers.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-22 16:03:08 +01:00
505f101e00
Update wxGTK30 to wxGTK32 in paraver kernel
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-22 16:03:06 +01:00
f44eebc133
flake.lock: Update
...
Flake lock file updates:
• Updated input 'nixpkgs':
'path:/nix/store/z7y28qzhk7driiwcw78k0mb24laknm0f-source?lastModified=1700390070&narHash=sha256-de9KYi8rSJpqvBfNwscWdalIJXPo8NjdIZcEJum1mH0%3D&rev=e4ad989506ec7d71f7302cc3067abd82730a4beb' (2023-11-19)
→ 'path:/nix/store/2csx2kkb2hxyxhhmg2xs9jfyypikwwk6-source?lastModified=1736867362&narHash=sha256-i/UJ5I7HoqmFMwZEH6vAvBxOrjjOJNU739lnZnhUln8%3D&rev=9c6b49aeac36e2ed73a8c472f1546f6d9cf1addc' (2025-01-14)
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-22 16:02:49 +01:00
2f6f6ba703
Update PM GitLab tokens to new URL
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 15:43:13 +01:00
371b0c7e76
Fix MPICH build by fetching upstream patches too
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 15:43:13 +01:00
ae34eacf4a
flake.lock: Update
...
Flake lock file updates:
• Updated input 'agenix':
'github:ryantm/agenix/de96bd907d5fbc3b14fc33ad37d1b9a3cb15edc6' (2024-07-09)
→ 'github:ryantm/agenix/f6291c5935fdc4e0bef208cfc0dcab7e3f7a1c41' (2024-08-10)
• Updated input 'bscpkgs':
'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=de89197a4a7b162db7df9d41c9d07759d87c5709 ' (2024-04-24)
→ 'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=6782fc6c5b5a29e84a7f2c2d1064f4bcb1288c0f ' (2024-11-29)
• Updated input 'nixpkgs':
'github:NixOS/nixpkgs/693bc46d169f5af9c992095736e82c3488bf7dbb' (2024-07-14)
→ 'github:NixOS/nixpkgs/9c6b49aeac36e2ed73a8c472f1546f6d9cf1addc' (2025-01-14)
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 15:43:13 +01:00
dab6f08d89
Set nixpkgs to track nixos-24.11
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 15:43:13 +01:00
8190523c30
Add script to monitor GPFS
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 15:43:07 +01:00
d335d69ba6
Add BSC machines to ssh config
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:51 +01:00
cec49eb5fc
Collect statistics from logged users
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:48 +01:00
22db38c98f
Add custom GPFS exporter for MN5
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:46 +01:00
0d4eebbb59
Remove exception to fetch task endpoint
...
It causes the request to go to the website rather than the Gitea
service.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:43 +01:00
025f6a0c0c
Use SSD for boot, then switch to NVME
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:40 +01:00
abc74c5445
Use NVME as root
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:37 +01:00
6942f09f69
Keep host header for Grafana requests
...
This was breaking requests due to CSRF check.
See: https://github.com/grafana/grafana/issues/45117#issuecomment-1033842787
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:32 +01:00
56f6855af7
Ignore logging requests from the gitea runner
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:28 +01:00
81c822e68e
Log the client IP not the proxy
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:22 +01:00
53e80b1f19
Ignore misc directory
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:19 +01:00
21feb01e7b
Create paste directories in /ceph/p
...
Ensure that all hut users have a paste directory in /ceph/p owned by
themselves. We need to wait for the ceph mount point to create them, so
we use a systemd service that waits for the remote-fs.target.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:16 +01:00
9ea7b2b475
Add p command to paste files
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:10 +01:00
fce4d89e1d
Use nginx to serve website and other services
...
Instead of using multiple tunels to forward all our services to the VM
that serves jungle.bsc.es, just use nginx to redirect the traffic from
hut. This allows adding custom rules for paths that are not posible
otherwise.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:07 +01:00
6b282375f8
Mount the NVME disk in /nvme
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:22:58 +01:00
6782fc6c5b
Add cacheline parameter to nOS-V
...
By default it is set to 64 bits. The cacheline parameter is required
when cross-compiling nOS-V, as it cannot be read from the build machine.
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-11-29 09:16:03 +01:00
73550ad5a9
Remove unneeded NODES dependencies
...
The autoreconfHook helper already provides autotools binaries. Also NODES
no longer uses papi.
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-11-29 09:16:03 +01:00
48d67ef6c2
Fix NODES native dependencies
...
Move NODES build tools to nativeBuildInputs. This is needed for
cross-compilation, given that build tools must much the build system.
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-11-29 09:16:03 +01:00
Raúl Peñacoba
73e30d20e9
Python is needed in openmp now
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-11-29 09:09:27 +01:00
5f85082553
Update sonar to 1.0.1
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-11-27 16:10:55 +01:00
46f15ac201
Update LLVM to 2024.11
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-11-27 16:10:52 +01:00
b442ddf1a4
Update Nanos6 to 4.2
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-11-27 16:10:50 +01:00
b006538147
Update TAMPI to 4.0
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-11-27 16:09:15 +01:00
995aa0b2e2
Update NODES to 1.3
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-11-27 16:09:12 +01:00
896ec0ad0f
Update nOS-V to 3.1.0
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-11-27 16:09:09 +01:00
2d9d2701a9
Update ovni to 1.11.0
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-11-27 16:08:50 +01:00
74e11db8b6
Only enable MPI in ovni on native builds
...
Tested with:
hut% nix build .#bsc-ci.all
hut% nix build .#pkgsCross.riscv64.ovni
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Reviewed-by: Aleix Boné <aleix.boneribo@bsc.es>
2024-10-28 13:42:19 +01:00
e046363e52
nos-v: fix cross compilation
...
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-10-28 13:40:35 +01:00
aa3f816388
ovni: fix cross compilation
...
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-10-28 13:40:33 +01:00
3eff2662bb
paraver: install manpages
...
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-10-28 13:39:52 +01:00
260986b9f2
Delay nix-gc until /home is mounted
...
Prevents starting the garbage collector before the remote FS are
mounted, in particular /home. Otherwise, all the gcroots which have
symlinks in /home will be considered stale and they will be removed.
See: #79
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-09-20 09:45:30 +02:00
15afbe94bd
Add dbautist user with access to hut
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-09-20 09:42:02 +02:00
efd35a9cd1
Set the serial console to ttyS1 in raccoon
...
Apparently the ttyS0 console doesn't exist but ttyS1 does:
raccoon% sudo stty -F /dev/ttyS0
stty: /dev/ttyS0: Input/output error
raccoon% sudo stty -F /dev/ttyS1
speed 9600 baud; line = 0;
-brkint -imaxbel
The dmesg line agrees:
00:03: ttyS1 at I/O 0x2f8 (irq = 3, base_baud = 115200) is a 16550A
The console configuration is then moved from base to xeon to allow
changing it for the raccoon machine.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:56 +02:00
50ad1d637c
Remove setLdLibraryPath and driSupport options
...
They have been removed from NixOS. The "hardware.opengl" group is now
renamed to "hardware.graphics".
See: 98cef4c273
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:53 +02:00
c299d53146
Add documentation section about GRUB chain loading
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:47 +02:00
152b71e718
Add 10 min shutdown jitter to avoid spikes
...
The shutdown timer will fire at slightly different times for the
different nodes, so we slowly decrease the power consumption.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:44 +02:00
0911d5b92a
Don't mount the nix store in owl nodes
...
Initially we planned to run jobs in those nodes by sharing the same nix
store from hut. However, these nodes are now used to build packages
which are not available in hut. Users also ssh to the nodes, which
doesn't mount the hut store, so it doesn't make much sense to keep
mounting it.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:42 +02:00
5ddae068af
Emulate other architectures in owl nodes too
...
Allows cross-compilation of packages for RISC-V that are known to try to
run RISC-V programs in the host.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:39 +02:00
d17be714ec
Program shutdown for August 2nd for all machines
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:36 +02:00
28ce15d74d
Enable debuginfod daemon in owl nodes
...
WARNING: This will introduce noise, as the daemon wakes up from time to
time to check for new packages.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:30 +02:00
504f9bb570
Set gitea and grafana log level to warn
...
Prevents filling the journal logs with information messages.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:27 +02:00
f158cb63e8
Set default SLURM job time limit to one hour
...
Prevents enless jobs from being left forever, while allow users to
request a larger time limit.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:24 +02:00
8860f76cad
Allow other jobs to run in unused cores
...
The current select mechanism was using the memory too as a consumable
resource, which by default only sets 1 MiB per node. As each job already
requests 1 MiB, it prevents other jobs from running.
As we are not really concerned with memory usage, we only use the unused
cores in the select criteria.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:22 +02:00
b86798cd69
Use authentication tokens for PM GitLab runner
...
Starting with GitLab 16, there is a new mechanism to authenticate the
runners via authentication tokens, so use it instead. Older tokens and
runners are also removed, as they are no longer used.
With the new way of managing tokens, both the tags and the locked state
are managed from the GitLab web page.
See: https://docs.gitlab.com/ee/ci/runners/new_creation_workflow.html
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:16 +02:00
7ed74931cf
flake.lock: Update
...
Flake lock file updates:
• Updated input 'agenix':
'github:ryantm/agenix/1381a759b205dff7a6818733118d02253340fd5e' (2024-04-02)
→ 'github:ryantm/agenix/de96bd907d5fbc3b14fc33ad37d1b9a3cb15edc6' (2024-07-09)
• Updated input 'nixpkgs':
'github:NixOS/nixpkgs/6143fc5eeb9c4f00163267708e26191d1e918932' (2024-04-21)
→ 'github:NixOS/nixpkgs/693bc46d169f5af9c992095736e82c3488bf7dbb' (2024-07-14)
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:13 +02:00
6e9d33b483
Allow ptrace to any process of the same user
...
Allows users to attach GDB to their own processes, without requiring
running the program with GDB from the start. It is only available in
compute nodes, the storage nodes continue with the restricted settings.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:09 +02:00
58abaefbc4
Add abonerib user to hut, raccon, owl1 and owl2
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:07 +02:00
5ea7827a8a
Grant rpenacob access to owl1 and owl2 nodes
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:05 +02:00
b17e4a13f9
Access private repositories via hut SSH proxy
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:03 +02:00
9c4e60c2c2
Set the default proxy to point to hut
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:35:56 +02:00
e7376917bd
Allow incoming traffic to hut proxy
...
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:35:23 +02:00
130e191d37
eudy: koro: fcs: Fix fcs unprotected cpuid all
...
smp_processor_id() was called in a preepmtible context, which could
invalidate the returned value. However, this was not harmful, because
fcs threads in nosv are pinned.
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-07-17 11:40:20 +02:00
349f69e30a
Add support for armv7 emulation in hut
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-07-17 11:12:48 +02:00
59ab6405c5
Monitor raccoon machine via IPMI
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-07-17 11:12:32 +02:00
a0dab66aa5
Move vlopez user to jungleUsers for koro host
...
Access to other machines can be easily added into the "hosts" attribute
without the need to replicate the configuration.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-07-16 12:35:39 +02:00
525cad4117
Add raccoon motd file
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-07-16 12:35:38 +02:00
24ee74d614
Split xeon specific configuration from base
...
To accomodate the raccoon knights workstation, some of the configuration
pulled by m/common/main.nix has to be removed. To solve it, the xeon
specific parts are placed into m/common/xeon.nix and only the common
configuration is at m/common/base.nix.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-07-16 12:35:37 +02:00
15b4b28d2c
Control user access to each machine
...
The users.jungleUsers configuration option behaves like the users.users
option, but defines the list attribute `hosts` for each user, which
filters users so that only the user can only access those hosts.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-07-16 12:35:34 +02:00
b1ce302e4b
Add PostgreSQL DB for performance test results
...
The database will hold the performance results of the execution of the
benchmarks. We follow the same setup on knights3 for now.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-07-16 12:35:24 +02:00
b8b85f55cd
Enable Grafana email alerts
...
Allows sending Grafana alerts via email too, so we have a reduntant
mechanism in case Slack fails to deliver them.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-05-31 15:57:38 +02:00
1189626a6f
Enable mail notification in Gitea
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-05-31 10:56:49 +02:00
dbd95dd7b8
Add msmtp to send notifications via email
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-05-31 10:56:20 +02:00
81b680a7d2
Allow Ceph traffic to lake2
2024-05-02 17:43:48 +02:00
ba60e121df
Collect Gitea metrics in Prometheus
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-05-02 17:32:25 +02:00
432e6c8521
Add Gitea service
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-05-02 17:31:51 +02:00
c8160122b3
Add firewall rules for Ceph and monitoring
...
The firewall was blocking the monitoring traffic from hut and the Ceph
traffic among OSDs. The rules only allow connecting from the specific
host that they are supposed to be coming from.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-04-25 13:25:11 +02:00
3863fc25a5
Add workaround for MPICH 4.2.0
...
See: https://github.com/pmodels/mpich/issues/6946
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-04-25 13:25:08 +02:00
2b26cd2f46
Fix SLURM bug in rank integer sign expansion
...
See: https://bugs.schedmd.com/show_bug.cgi?id=19324
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-04-25 13:25:05 +02:00
30f2079f0b
Merge pmix outputs for MPICH
...
MPICH expects headers and libraries to be present in the same directory.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-04-25 13:25:03 +02:00
366436b6d3
Remove nixseparatedebuginfod input
...
It has been integrated in nixpkgs, so is no longer required.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-04-25 13:24:58 +02:00
9f1cd02144
flake.lock: Update
...
Flake lock file updates:
• Updated input 'agenix':
'github:ryantm/agenix/daf42cb35b2dc614d1551e37f96406e4c4a2d3e4' (2023-10-08)
→ 'github:ryantm/agenix/1381a759b205dff7a6818733118d02253340fd5e' (2024-04-02)
• Updated input 'agenix/darwin':
'github:lnl7/nix-darwin/87b9d090ad39b25b2400029c64825fc2a8868943' (2023-01-09)
→ 'github:lnl7/nix-darwin/4b9b83d5a92e8c1fbfd8eb27eda375908c11ec4d' (2023-11-24)
• Updated input 'agenix/home-manager':
'github:nix-community/home-manager/32d3e39c491e2f91152c84f8ad8b003420eab0a1' (2023-04-22)
→ 'github:nix-community/home-manager/3bfaacf46133c037bb356193bd2f1765d9dc82c1' (2023-12-20)
• Added input 'agenix/systems':
'github:nix-systems/default/da67096a3b9bf56a91d16901293e51ba5b49a27e' (2023-04-09)
• Updated input 'bscpkgs':
'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=e148de50d68b3eeafc3389b331cf042075971c4b ' (2023-11-22)
→ 'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=de89197a4a7b162db7df9d41c9d07759d87c5709 ' (2024-04-24)
• Updated input 'nixpkgs':
'github:NixOS/nixpkgs/e4ad989506ec7d71f7302cc3067abd82730a4beb' (2023-11-19)
→ 'github:NixOS/nixpkgs/6143fc5eeb9c4f00163267708e26191d1e918932' (2024-04-21)
• Updated input 'nixseparatedebuginfod':
'github:symphorien/nixseparatedebuginfod/232591f5274501b76dbcd83076a57760237fcd64' (2023-11-05)
→ 'github:symphorien/nixseparatedebuginfod/98d79461660f595637fa710d59a654f242b4c3f7' (2024-03-07)
• Removed input 'nixseparatedebuginfod'
• Removed input 'nixseparatedebuginfod/flake-utils'
• Removed input 'nixseparatedebuginfod/flake-utils/systems'
• Removed input 'nixseparatedebuginfod/nixpkgs'
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-04-25 13:24:29 +02:00
de89197a4a
Add bigotes package
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-04-24 17:59:24 +02:00
5d3820631a
Fix Nanos6 4.0 build
...
It looks like after upgrading the compiler the build breaks. The patch
simply adds the missing cstdint include, until a new release is made.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-04-23 12:03:49 +02:00
9c8a077828
Enable separatedebuginfo for openmp
...
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-04-12 12:27:54 +02:00
fce556cb28
Build OmpSs-2 LLVM with commit version information
...
Allows users to see which commit (or git tag) was used in clang.
Examples for the release and git versions:
% clang --version
clang version 18.0.0 (18.0.0-ompss-2)
% clang --version
clang version 18.0.0 (0a6d6c6)
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-03-14 14:13:14 +01:00
82ccae1315
Use google.com probe instead of bsc.es
...
The main website of the BSC is failing every day around 3:00 AM for
almost one hour, so it is not a very good target. Instead, google.com is
used which should be more reliable. The same robots.txt path is fetched,
as it is smaller than the main page.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-03-05 16:52:21 +01:00
37ce5ef391
Paraver: Use wrapGApps Hook for nixos
...
Needed to fix the error on NixOS:
GLib-GIO-ERROR **: No GSettings schemas are installed on the system
See https://github.com/NixOS/nixpkgs/issues/16285
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-02-15 16:06:29 +01:00
1df80460d2
Add another HTTPS probe for bsc.es
...
As all other HTTPS probes pass through the opsproxy01.bsc.es proxy, we
cannot detect a problem in our proxy or in the BSC one. Adding another
target like bsc.es that doesn't use the ops proxy allows us to discern
where the problem lies.
Instead of monitoring https://www.bsc.es/ directly, which will trigger
the whole Drupal server and take a whole second, we just fetch robots.txt
so the overhead on the server is minimal (and returns in less than 10 ms).
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-02-13 12:26:56 +01:00
7f17fe8874
Move slurm client in a separate module
...
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-02-13 11:11:17 +01:00
Raúl Peñacoba
3b21a32d83
Add ovni to OpenMP-V
...
Allows building OpenMP-V with ovni support, which is neccessary to run
the runtime tests of OpenMP-V in ovni.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-01-15 10:20:46 +01:00
5880a6e5f6
Enable public-inbox at jungle.bsc.es/lists
...
The public-inbox service fetches emails from the sourcehut mailing lists
and displays them on the web. The idea is to reduce the dependency on
external services and add a secondary storage for the mailing lists in
case sourcehut goes down or changes the current free plans.
The service is available in https://jungle.bsc.es/lists/ and is open to
the public. It currently mirrors the bscpkgs and jungle mailing list.
We also edited the CSS to improve the readability and have larger fonts
by default.
The service for public-inbox produced by NixOS is not well configured to
fetch emails from an IMAP mail server, so we also manually edit the
service file to enable the network.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-12-15 11:18:08 +01:00
c4d5135fde
Split openmp versions in separate derivations
...
The openmp derivation provides both libomp and libompv. To avoid
accidentally linking with the wrong library and to avoid the nosv
dependency on libomp, this patch separates each version in a different
derivation.
Also, it adapts the clang wrappers and stdenvs to provide an stdenv per
openmp library where each openmp will be used by default when the
compiler flag "-fopenmp" is used. This eases linking ompv with nixpkgs
libraries, such as blis, that expect openmp to be provided with stdenv.
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-12-07 18:01:20 +01:00
3f2b9a766b
Update clang with internal bug release
...
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-12-07 18:01:08 +01:00
ecbb45d6ac
Monitor https://pm.bsc.es/gitlab/ too
...
The GitLab instance is in the /gitlab endpoint and may fail
independently of https://pm.bsc.es/ .
Cc: Víctor López <victor.lopez@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-12-05 09:56:28 +01:00
c564d945d4
Enable nixseparatedebuginfod module
...
The module is only enabled on Hut and Eudy because we noticed activity
on the debuginfod service even if no debug session was active.
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-12-04 11:04:52 +01:00
Raúl Peñacoba
3ed644b88f
Add clangNosvOpenmp-ld compiler test
...
Add a test to verify that "clang -fopenmp=libompv" links correctly with
nOS-V even though it is not placed in the buildInputs.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-12-01 16:35:24 +01:00
Raúl Peñacoba
8ceaddfea7
Split OpenMP from Clang in LLVM
...
As the OpenMP-V implementation requires to be built with nOS-V, we can
split the OpenMP package in a different derivation to prevent rebuilds
of clang. Additionally, as OpenMP-V now can be build alongside the
vanilla OpenMP runtime, we simply build a single openmp derivation with
both runtimes. Only a single build of the clang compiler is now
required.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-12-01 16:31:56 +01:00
2a953d811c
Build TAMPI with ovni support
...
By default we build TAMPI with ovni support, as it will be disabled in
runtime unless explicitly enabled by the TAMPI_INSTRUMENT=ovni
environment variable.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-29 17:49:30 +01:00
fec4ddf6ab
Merge TAMPI release and git in the same file
...
In order to reduce duplicate information we just place the two sources
in the same file.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-29 17:49:22 +01:00
9aaea0da0e
Update paraver: 4.10.6 -> 4.11.2
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-29 12:19:27 +01:00
ed887b0412
Use tmpfs in /tmp
...
The /tmp directory was using the SSD disk which is not erased across
boots. Nix will use /tmp to perform the builds, so we want it to be as
fast as possible. In general, all the machines have enough space to
handle large builds like LLVM.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-28 12:25:50 +01:00
f55b48ec86
Update ompv test with -fopenmp=libompv flag
...
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-11-24 16:48:09 +01:00
1e52075c18
TAGASPI 2023.11 update and move to public repo
...
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-11-24 16:47:52 +01:00
062b1c3c77
Mercurium 2023.11 update
...
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-11-24 16:47:42 +01:00
1520eaa64e
TAMPI 2023.11 update
...
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-11-24 16:47:38 +01:00
54b4448e4b
Ovni 2023.11 update
...
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-11-24 16:47:27 +01:00
28a7496fbd
nOS-V 2023.11 update
...
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-11-24 16:47:22 +01:00
b5dae25e7f
NODES 2023.11 update
...
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-11-24 16:47:18 +01:00
bdc3670ccc
Nanos6 2023.11 update
...
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-11-24 16:47:09 +01:00
af590d5ace
Clang 2023.11 update
...
Clang nos-v-merge branch has been merged into master.
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-11-24 16:47:02 +01:00
8a31895e48
Update nixpkgs commit in default.nix
...
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-11-24 16:46:54 +01:00
d9ae85ce4b
Add a more strict test for OpenMP+nOS-V
...
In this test we ensure that the worksharing region is running inside a
nOS-V task, so we know that we are not using the vanilla OpenMP by
accident.
We also keep the previous test test/compilers/clang-openmp.nix as-is, so
we can check that the compiler injects the nosv library dependency in
the final binary on its own.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-24 14:52:23 +01:00
20ded0c0df
Change the GPI-2 URL to a public repository
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-24 14:49:03 +01:00
fe1d3fbb80
Enable runners for pm.bsc.es/gitlab too
...
The old runners for the PM gitlab were disabled in configuration in the
last outage, but they remained working until we reboot the node. With
this change we enable the runners for both PM and gitlab.bsc.es.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-24 14:45:23 +01:00
5234ca32fd
Remove complete ceph package from hut
...
Only the ceph-client is needed.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-24 12:58:54 +01:00
cfe0c0e6e6
Fix warning in slurm exporter using vendorHash
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-24 12:58:50 +01:00
7afe7344ac
Remove old Ceph package overlay
...
The Ceph package is now integrated in upstream nixpkgs.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-24 12:58:47 +01:00
bd83ca53ab
flake.lock: Update
...
Flake lock file updates:
• Updated input 'agenix':
'github:ryantm/agenix/d8c973fd228949736dedf61b7f8cc1ece3236792' (2023-07-24)
→ 'github:ryantm/agenix/daf42cb35b2dc614d1551e37f96406e4c4a2d3e4' (2023-10-08)
• Updated input 'bscpkgs':
'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=f605f8e5e4a1f392589f1ea2b9ffe2074f72a538 ' (2023-10-31)
→ 'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=e148de50d68b3eeafc3389b331cf042075971c4b ' (2023-11-22)
• Updated input 'nixpkgs':
'github:NixOS/nixpkgs/e56990880811a451abd32515698c712788be5720' (2023-09-02)
→ 'github:NixOS/nixpkgs/e4ad989506ec7d71f7302cc3067abd82730a4beb' (2023-11-19)
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-24 12:57:44 +01:00
e148de50d6
Remove Paraver fast
...
The build is broken and the official Paraver already merged support
for fast trace loading.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-22 15:38:35 +01:00
ff34ab5732
Enable NIX_DEBUG = 1 in the clang-ompss2 test
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-22 15:38:31 +01:00
3f17a489ef
Fix clang build adding rpath to libstdc++
...
The binaries generated during the build process of clang are missing the
RPATH of the libstdc++.so library, which is provided by gcc libs.
Similarly, the clang binary itself also needs the rpath to the
libstdc++.so library path.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-22 15:38:28 +01:00
501a92376b
Fix GPI-2 using an unified rdma-core
...
The libraries and includes are no longer in the default output, so we
merge them in a single directory using symlinkJoin.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-22 15:38:17 +01:00
4033854014
Disable nix-wrap as it is broken
...
The pkgsStatic.libcap dependency fails to build.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-22 15:38:13 +01:00
e6b4af4b16
Rename pkgconfig to pkg-config
...
The alias pkgconfig has been removed.
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-22 15:38:05 +01:00
cbf6f03a84
flake.lock: Update
...
Flake lock file updates:
• Updated input 'nixpkgs':
'path:/nix/store/s4jqyj35hii03rs7j5n6vn7gpgp6ja81-source?lastModified=1692447944&narHash=sha256-fkJGNjEmTPvqBs215EQU4r9ivecV5Qge5cF/QDLVn3U%3D&rev=d680ded26da5cf104dd2735a51e88d2d8f487b4d' (2023-08-19)
→ 'path:/nix/store/z7y28qzhk7driiwcw78k0mb24laknm0f-source?lastModified=1700390070&narHash=sha256-de9KYi8rSJpqvBfNwscWdalIJXPo8NjdIZcEJum1mH0%3D&rev=e4ad989506ec7d71f7302cc3067abd82730a4beb' (2023-11-19)
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-22 15:37:46 +01:00
4316e7b12d
Enable separatedebuginfo for common BSC packages
...
For now, we keep dontStrip for packages that already had it for systems
without the separatedebuginfo support.
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-11-20 16:36:34 +01:00
e7bdc1595a
Fix openmp.nix being called with callPackage
...
callPackage was overriding the inner callPackage override, which made
overriding the clang derivation through the override function impossible.
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-11-15 16:22:53 +01:00
f0f6b7c354
Enable dontStrip on clang if enableDebug is set
...
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-11-15 16:22:13 +01:00
0086b9452a
Fix llvm postInstall
...
Some llvm versions do not generate the intel and gomp support libraries
and the post install script fails because it cannot remove them. This
patch makes removal optional.
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-11-15 16:21:47 +01:00
4111b22f57
Fix clang link flag typo
...
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-11-14 17:09:23 +01:00
Raúl Peñacoba
85c70a8d6b
Always enable assertions in OmpSs-2 LLVM
...
There are important assertions for OmpSs-2 to catch early bugs. Building
without asserts enabled causes warnings due to unused variables.
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-11-09 16:57:37 +01:00
0d9c99a24e
BSC packages are no longer in bsc attribute
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-09 13:40:48 +01:00
db98b1f698
flake.lock: Update
...
Flake lock file updates:
• Updated input 'bscpkgs':
'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs/heads/master&rev=3a4062ac04be6263c64a481420d8e768c2521b80 ' (2023-09-14)
→ 'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=f605f8e5e4a1f392589f1ea2b9ffe2074f72a538 ' (2023-10-31)
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-09 13:40:48 +01:00
84c4b6b81c
Switch bscpkgs URL to sourcehut
...
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-09 13:40:48 +01:00
f605f8e5e4
Add clang openmp test for CI
...
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-10-31 16:52:55 +01:00
8d5714c67b
Move nixpkgs reference to its own expression
...
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-10-31 16:52:55 +01:00
4727c98354
Remove jemalloc dep from NODES
...
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-10-31 16:52:55 +01:00
bb1de835f7
Add clang with nosv-powered OpenMP
...
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-10-31 16:52:55 +01:00
ebeb2ff549
Set NOSV_HOME for clang wrapped with nodes
...
This is needed since nosv must appear as a 1rst level dependency on the
final executable. Clang will add the dependency as long as it knows
where to find nosv (and nodes is used).
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-10-31 16:52:55 +01:00
9f245946d7
Build NODES with clang dependency if tests enabled
...
Reviewed-By: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-10-31 16:52:55 +01:00
19e195b894
Monitor anella instead of gw.bsc.es
...
The target gw.bsc.es doesn't reply to our ICMP probes from hut. However,
the anella hop in the tracepath is a good candidate to identify cuts
between the login and the provider and between the provider and external
hosts like Google or Cloudflare DNS.
Reviewed-By: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-10-27 12:46:08 +02:00
54c2bd119f
Add ICMP probes
...
These probes check if we can reach several targets via ICMP, which is
not proxied, so they can be used to see if ICMP forwarding is working in
the login node.
In particular, we test if we can reach the Google (8.8.8.8) and
Cloudflare (1.1.1.1) DNS servers, the BSC gateway which responds to ping
only from the intranet and the login node (ssfhead).
Reviewed-By: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-10-25 17:13:03 +02:00
e5d85c1b38
Enable proxy for Grafana too
...
The alerts need to contact the slack endpoint, so we add the proxy
environment variables to the grafana systemd service.
Reviewed-By: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-10-25 16:55:56 +02:00
f1486b84c1
Make blackbox exporter use the proxy
...
By default it was trying to reach the targets using the default gateway,
but since the electrical cut of 2023-10-20, the login node has not
enabled forwarding again. So better if we don't rely on it.
Reviewed-By: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-10-25 16:55:24 +02:00
51e331a9d9
Update sonar to 0.2.0 and use GitHub
...
Reviewed-By: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-10-25 16:06:25 +02:00
472f4b0334
Don't log SLURM connection attempts from ssfhead
2023-10-06 15:22:04 +02:00
425dca3e00
Add docker runner too
2023-10-06 15:17:07 +02:00
e4080cf931
Monitor gitlab.bsc.es too
2023-10-06 15:17:07 +02:00
fc9285f89d
Monitor PM webpage via blackbox
2023-10-06 15:17:07 +02:00
fbe238f5b6
Temporarily disable pm runners
2023-10-06 15:17:07 +02:00
9874da566d
Add runner for gitlab.bsc.es
2023-10-06 15:17:07 +02:00
91cdc91738
Fetch sonar tag from refs/tags
2023-10-06 14:52:12 +02:00
db391ee9c2
Enable verbose output in nix build for CI
2023-10-06 14:39:47 +02:00
bab7a45587
Fix commit for GPI-2 and tagaspi
2023-10-06 14:34:03 +02:00
8731a4797d
Enable packages served by PM gitlab
2023-10-06 14:24:57 +02:00
9e889884c9
Don't build ovni in verbose mode
2023-10-05 08:01:43 +02:00
5412e14dba
Patch shebangs in ovni runners
2023-10-04 13:44:03 +02:00
41a93cd176
Enable verbose build and tests for ovni
2023-10-04 13:40:02 +02:00
873d2f1abc
Enable tests in ovni
2023-10-04 13:31:55 +02:00
867e61acde
Remove --rebuild flag
2023-10-04 12:45:51 +02:00
7ace376e4e
Also define no RT clang stdenv
2023-10-04 12:43:47 +02:00
ce4b196010
Remove CONTRIBUTING file
2023-10-03 12:26:26 +02:00
f9c832654e
Remove NOISE file
2023-10-03 12:25:45 +02:00
4533c94b4f
Remove garlic from bscpkgs
2023-10-03 12:24:58 +02:00
7b72b38023
Remove garlic from README
2023-10-03 12:23:01 +02:00
779247691f
Add metadata for Nanos6
2023-10-03 10:00:34 +02:00
c724ad2ad3
Remove old CI derivation
2023-10-02 11:17:01 +02:00
2a3b269b9c
Mark packages affected by PM GitLab
2023-10-02 11:05:55 +02:00
7f3d3b953d
Always rebuild CI target
2023-10-02 10:57:53 +02:00
0184f5e382
Print list of CI paths when building
2023-10-02 10:57:53 +02:00
916e4f49a6
Move packages from bsc/ to pkgs/
2023-10-02 10:57:53 +02:00
8fe7458969
Remove deprecated pkgs and improve CI
2023-10-02 10:57:53 +02:00
be25283da5
Update mcxx to 2023.05
2023-10-02 10:57:53 +02:00
1864c08c95
Disable packages from PM GitLab while is down
2023-10-02 10:57:53 +02:00
bead8aea0a
Run the tests from the jungle flake
2023-09-28 11:28:00 +02:00
dd802e2ec9
Use flakes for the CI build command
2023-09-28 09:16:04 +02:00
8dbd1a3c34
Port clang and intel packages and enable tests
2023-09-28 09:15:34 +02:00
ce7238c780
Remove tracing output from intel packages
2023-09-28 09:15:09 +02:00
552ebdbede
Export the runtime home for clang if given
2023-09-28 09:14:36 +02:00
ebc5c4d84f
Allow anonymous access to grafana
2023-09-22 10:51:30 +02:00
8634a9e133
Remove user/group when using DynamicUsers
2023-09-22 10:13:06 +02:00
0ce79ed79e
Set the SLURM_CONF variable
2023-09-21 22:22:00 +02:00
5f492ee1d7
Enable slurm-exporter service
2023-09-21 21:40:02 +02:00
9071a4de8b
Add prometheus-slurm-exporter package
2023-09-21 21:34:18 +02:00
3040a803b2
Mount the hut nix store for SLURM jobs
2023-09-20 19:38:43 +02:00
70a9e855cf
Enable direnv integration
2023-09-20 09:32:58 +02:00
51dcc6896e
Begin moving bsc packages to root attribute
2023-09-19 10:33:32 +02:00
fd766d8ff8
Don't build nanos6 with debug symbols by default
2023-09-15 19:05:55 +02:00
aa64e9ef24
Remove bscpkgs from the registry and nixPath
...
This is done to prevent accidental evaluations where the nixpkgs input
of bscpkgs is still pointing to a different version that the one
specified in the jungle flake. Instead use jungle#bscpkgs.X to get a
package from bscpkgs.
2023-09-15 12:00:33 +02:00
ba2b74fd5a
Add bscpkgs and nixpkgs top level attributes
...
Allows the evaluation of packages of the intermediate overlays.
2023-09-15 12:00:33 +02:00
1ae5d9e25e
Use hut packages as the default package set
...
Allows the user to directly access nixpkgs and bscpkgs from the top
level as `nix build jungle#htop` and `nix build jungle#bsc.ovni`.
2023-09-15 12:00:28 +02:00
ff98ba47c4
Don't fetch registry flakes from the net
2023-09-15 12:00:28 +02:00
599b23ef52
flake.lock: Update
...
Flake lock file updates:
• Updated input 'bscpkgs':
'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs/heads/master&rev=6122fef92701701e1a0622550ac0fc5c2beb5906 ' (2023-09-07)
→ 'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs/heads/master&rev=3a4062ac04be6263c64a481420d8e768c2521b80 ' (2023-09-14)
2023-09-15 11:50:47 +02:00
3a4062ac04
Revert "Remove flake-lock file"
...
This reverts commit a3e1047f515e90292eadbe9dbc5f3aa00ba87730.
2023-09-14 18:21:50 +02:00
a3e1047f51
Remove flake-lock file
2023-09-14 17:54:32 +02:00
8dbee06d1d
Revert "Update slurm to 23.02.05.1"
...
This reverts commit 7bfd786c01c36131cd00b90fc6a9503fd1226578.
2023-09-14 15:46:18 +02:00
d522113cb9
Open ports in firewall of compute nodes
2023-09-14 15:45:43 +02:00
7bfd786c01
Update slurm to 23.02.05.1
2023-09-13 17:44:24 +02:00
5a5f4672cd
Monitor storage nodes via IPMI too
2023-09-13 15:57:13 +02:00
2646ad4b70
Enable fstrim service
2023-09-12 16:39:45 +02:00
b120a7ca85
Serve the nix store from hut
2023-09-12 12:19:43 +02:00
2a0254b684
Add encrypted munge key with agenix
2023-09-08 19:05:45 +02:00
e3e6e7662d
Remove unused large port hole in firewall
2023-09-08 18:22:48 +02:00
868f825e26
Make exporters listen in localhost only
2023-09-08 18:13:04 +02:00
f231dc81f1
Allow only some ports for srun
2023-09-08 17:51:37 +02:00
a758eef354
Block ssfhead from reaching our slurm daemon
2023-09-08 17:36:28 +02:00
9c9c41fb57
Poweroff idle slurm nodes after 1 hour
2023-09-08 16:49:53 +02:00
1a1708f16f
Add IB and IPMI node host names
2023-09-08 13:21:37 +02:00
efe1b7e399
flake.lock: Update
...
Flake lock file updates:
• Updated input 'bscpkgs':
'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs/heads/master&rev=ee24b910a1cb95bd222e253da43238e843816f2f ' (2023-09-01)
→ 'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs/heads/master&rev=6122fef92701701e1a0622550ac0fc5c2beb5906 ' (2023-09-07)
2023-09-07 11:13:45 +02:00
6122fef927
Don't replace the shebang in nix-wrap
2023-09-07 09:07:25 +00:00
Raúl Peñacoba
8597bb97ab
Add nix-wrap, which enables isolated environment in clusters
2023-09-07 09:07:25 +00:00
7d4c9a57c6
Update ovni to 1.3.0
2023-09-07 10:54:15 +02:00
3efc10e57d
Use version tag for sonar
2023-09-07 10:50:15 +02:00
065ab83083
Use release for bench6 dependencies
2023-09-07 09:13:12 +02:00
4883b750bd
Fix bench6 commit
2023-09-07 09:08:36 +02:00
ee5cbd08dd
Update sonar commit
2023-09-06 17:57:18 +02:00
61bd7ee947
Fix ovni gitUrl input parameter
2023-09-06 16:20:59 +02:00
abfd8484ee
Add sonar library
2023-09-06 15:33:55 +02:00
a63f578c99
Update clangOmpss2 to 2023.05.1
2023-09-06 15:12:51 +02:00
01e07d559c
Link clang with the dynamic llvm library
...
It dramatically reduces the size of the installation to 250 MiB. We also
need to inject the rpath of the libraries during the build phase with
CMAKE_BUILD_RPATH as well as zlib. The CMAKE_BUILD_WITH_INSTALL_PATH
option is disabled, as it contradicts the former.
2023-09-06 14:14:40 +02:00
4b06175b42
Only build clangOmpss2 to target the host
2023-09-05 17:55:38 +02:00
eb9876aff6
Unlock ovni gitlab runners
2023-09-05 16:59:45 +02:00
8d31c552f5
flake.lock: Update
...
Flake lock file updates:
• Updated input 'bscpkgs':
'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs/heads/master&rev=18d64c352c10f9ce74aabddeba5a5db02b74ec27 ' (2023-08-31)
→ 'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs/heads/master&rev=ee24b910a1cb95bd222e253da43238e843816f2f ' (2023-09-01)
• Updated input 'nixpkgs':
'github:NixOS/nixpkgs/d680ded26da5cf104dd2735a51e88d2d8f487b4d' (2023-08-19)
→ 'github:NixOS/nixpkgs/e56990880811a451abd32515698c712788be5720' (2023-09-02)
2023-09-05 15:03:26 +02:00
68f4d54dd1
Add agenix to all nodes
2023-09-04 22:10:43 +02:00
2042d58b72
Add agenix module to ceph
2023-09-04 22:07:07 +02:00
2c8c90e6e4
Remove old secrets
2023-09-04 22:04:32 +02:00
208dcb7dde
Mount /ceph in owl1 and owl2
2023-09-04 22:00:36 +02:00
e2f82a6383
Warn about the owl2 omnipath device
2023-09-04 22:00:17 +02:00
d704816de9
Clean owl2 configuration
2023-09-04 21:59:56 +02:00
74ec4eb22a
Move the ceph client config to an external module
2023-09-04 21:59:04 +02:00
0a5f9b55f5
Reorganize secrets and ssh keys
...
The agenix tools needs to read the secrets from a standalone file, but
we also need the same information for the SSH keys.
2023-09-04 21:36:31 +02:00
900de39e2f
Add anavarro user
2023-09-04 16:00:01 +02:00
1e466d07df
Set zsh inc_append_history option
2023-09-03 16:57:53 +02:00
13807c5e8f
Set zsh shell for rarias
2023-09-03 16:46:27 +02:00
d8d6d6d421
Enable zsh and fix key bindings
2023-09-03 16:42:04 +02:00
a242ddd39c
Keep a log over time with the config commits
2023-09-03 00:02:14 +02:00
a2c5fe1f5e
Configure bscpkgs.nixpkgs to follow nixpkgs
2023-09-02 23:37:59 +02:00
2c52ef9ff0
Store nixos config in /etc/nixos/config.rev
2023-09-02 23:37:11 +02:00
ee24b910a1
Use clang++ for C++ tests
2023-09-01 16:51:32 +02:00
4b1d4c18af
Set the host triple in clang
...
Fixes the problem where the triple used by newer versions of
config.guess don't match due to a change in x86 from
x86_64-unknown-linux-gnu to x86_64-pc-linux-gnu.
2023-09-01 16:50:44 +02:00
fd5fb5c055
Add asan test for clangOmpss2
2023-09-01 16:43:49 +02:00
acb91695ac
Enable binary emulation for other architectures
2023-08-31 17:27:08 +02:00
18d64c352c
Add pkg-config dependency for paraverKernel
2023-08-31 12:56:35 +02:00
124cb6a4c3
Update nixpkgs in default.nix too
2023-08-31 12:43:07 +02:00
bcf2df64c8
Add initial flake.lock
2023-08-31 12:41:15 +02:00
c30851d6e9
Add packages to flake.nix
2023-08-31 12:40:54 +02:00
9d93760e6f
Enable watchdog
2023-08-30 16:32:17 +02:00
aad67b9d99
Enable all osd on boot in lake2
2023-08-30 16:32:17 +02:00
e1d406023d
Scrape lake2 too
2023-08-29 12:33:26 +02:00
db6bb90af8
Also enable monitoring in lake2
2023-08-29 12:29:41 +02:00
1266c8f04e
Scrape metrics from bay
2023-08-29 11:58:00 +02:00
2b7823788c
Add monitoring in the bay node
2023-08-29 11:53:32 +02:00
86eacdd3e5
Add fio tool
2023-08-29 11:27:50 +02:00
4fa074f893
Add ceph tools in hut too
2023-08-28 17:58:21 +02:00
a260a1bc1b
Switch ceph logs to journal
2023-08-28 17:58:08 +02:00
8912d2b9bc
Update ceph to 18.2.0 in overlay
2023-08-25 18:20:21 +02:00
b4015ded86
Move pkgs overlay to overlay.nix
2023-08-25 18:12:00 +02:00
0f54d63a46
Enable ceph osd daemons in lake2
2023-08-25 14:54:51 +02:00
6c656182f1
Add the lake2 hostname to the hosts
2023-08-25 14:44:35 +02:00
be4187de3c
Use the sda for lake2
2023-08-25 13:40:10 +02:00
0b22a1b8a4
Remove netboot module
2023-08-25 13:39:01 +02:00
f18f1937ae
Disable pixiecore in hut for now
2023-08-25 13:21:00 +02:00
4b78ec9134
Add PXE helper
2023-08-25 12:05:33 +02:00
6c0c26b3aa
Enable netboot again for PXE
2023-08-24 19:08:23 +02:00
fb1744306d
Specify the disk by path
2023-08-24 15:27:37 +02:00
394c7ecd7b
Prepare lake2 config after bootstrap
...
The disk ID is different under NixOS.
2023-08-24 13:54:53 +02:00
3276f54e86
Add lake2 bootstrap config
2023-08-24 12:30:46 +02:00
4c806b8ae9
Add section to enable serial console
2023-08-24 12:29:44 +02:00
832866cbfa
Add agenix to PATH in hut
2023-08-23 17:42:50 +02:00
9fc393bb6a
Store ceph secret key in age
...
This allows a node to mount the ceph FS without any extra ceph
configuration in /etc/ceph.
2023-08-23 17:26:44 +02:00
d81d9d58e1
Add rarias key for secrets
2023-08-23 17:15:26 +02:00
d54dcc8d8f
Add ceph metrics to prometheus
2023-08-22 16:33:55 +02:00
a5fae4a289
Mount the ceph filesystem in hut
2023-08-22 16:15:46 +02:00
a355926cf0
Add ceph config in bay
2023-08-22 15:58:48 +02:00
d7a4420205
Add the bay host name
2023-08-22 15:56:09 +02:00
0b55ce3d02
Remove netboot and fixes
2023-08-22 12:12:15 +02:00
0ce574800e
Add bay node
2023-08-22 12:12:15 +02:00
a7e09e55df
Update flake
2023-08-22 11:28:54 +02:00
1622b3e7fc
Monitor power from other nodes via LAN
2023-08-22 11:28:54 +02:00
3424cac761
Increase prometheus retention time to one year
2023-08-22 11:28:54 +02:00
f98af9aeef
Don't set all_proxy
2023-08-22 11:28:54 +02:00
b4a20d7c3a
Update NODES to 1.0.1
2023-07-28 18:00:45 +02:00
8c14b75e44
Update nixpkgs to fix docker problem
2023-07-28 14:24:51 +02:00
e497e1b88b
Allow access to devices for node_exporter
2023-07-28 13:55:35 +02:00
07411beb49
GRUB version no longer needed
2023-07-27 17:22:20 +02:00
e8bab9928d
Upgrade flake: nixpkgs, bscpkgs and agenix
2023-07-27 17:19:17 +02:00
544d5a3d69
Kill slurmd remaining processes on upgrade
2023-07-27 14:49:20 +02:00
976cdd5a4d
Update ovni to 1.2.2
2023-07-26 16:00:02 +02:00
312f2cb368
koro: Add vlopez user
2023-07-21 13:00:43 +02:00
45ac6e95e9
Add koro node
2023-07-21 13:00:08 +02:00
e6bb6e735d
eudy: Add fcsv3 and intermediate versions for testing
2023-07-21 11:27:51 +02:00
cfbfcdbe8c
eudy: Enable memory overcommit
2023-07-21 11:27:51 +02:00
c31bfd6b4d
eudy: disable all cpu mitigations
2023-07-21 11:27:51 +02:00
f015e5f71c
Use builtin.fetchurl to see the progress
2023-07-17 10:52:28 +02:00
534c5dd261
Cache intel oneAPI package list
2023-07-17 10:52:03 +02:00
caf0e9545a
Fix gitUrl input name
2023-07-14 16:44:24 +02:00
d20fa359d9
Enable NTP using the BSC time server
2023-06-30 14:02:15 +02:00
9be15fdad2
Add the ssfhead node as gateway
2023-06-30 14:01:35 +02:00
f2f024b82d
Add zlib to the rpath
...
Instead of using LD_LIBRARY_PATH we provide the rpath from cmake, as
otherwise the clang compiler is also missing the dependency.
2023-06-28 11:18:35 +02:00
932d273ec7
Build OmpSs-2 llvm with zlib
...
The zlib is required by the lld linker to work with zlib compressed
sections in the ELF header. We also set the LD_LIBRARY_PATH during the
build, as otherwise the llvm-tblgen binary is unable to find the zlib
library, as its missing the directory in the rpath.
2023-06-28 10:45:03 +02:00
13e365002c
Use our host names first by default
2023-06-23 16:22:18 +02:00
a38072762f
Add DNS tools to resolve hosts
2023-06-23 16:15:45 +02:00
adf1ff29a7
Lower perf_event_paranoid to -1
2023-06-23 16:01:27 +02:00
1ec8d7a625
Set perf paranoid to 0 by default
2023-06-21 16:24:19 +02:00
f78f4f5822
Add perf to packages
2023-06-21 15:41:06 +02:00
67a57cb3e5
Allow srun to specify the cpu binding
...
The task/affinity plugin needs to be selected.
2023-06-21 13:16:23 +02:00
85896f8546
Move authorized keys to users.nix
2023-06-20 14:08:34 +02:00
5e728773c3
Add rpenacob user
2023-06-20 12:54:26 +02:00
0a06cf564b
Add osumb to the system packages
2023-06-16 19:22:41 +02:00
db26b2ae37
flake.lock: Update
...
Flake lock file updates:
• Updated input 'bscpkgs':
'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs%2fheads%2fmaster&rev=c775ee4d6f76aded05b08ae13924c302f18f9b2c ' (2023-04-26)
→ 'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs%2fheads%2fmaster&rev=cbe9af5d042e9d5585fe2acef65a1347c68b2fbd ' (2023-06-16)
2023-06-16 18:33:54 +02:00
f7d00dec25
Set mpi to mpich by default in bscpkgs
2023-06-16 18:26:51 +02:00
2053ec82b7
Add missing parameter to extend
2023-06-16 18:26:51 +02:00
f2434a17c2
Use explicit order in overlays
2023-06-16 18:26:51 +02:00
1f7045fcfe
Replace mpi inside bsc attribute
2023-06-16 18:26:51 +02:00
0c4a1efa27
Add mpich overlay
2023-06-16 18:26:51 +02:00
530958496b
Add coments in slurm config
2023-06-16 18:26:50 +02:00
df378a2933
Add eudy host key to known hosts
2023-06-16 17:29:48 +02:00
2a0fe5a137
Rename xeon08 to eudy
...
From Eudyptula, a little penguin.
2023-06-16 17:16:05 +02:00
cbe9af5d04
Update TAMPI to 2.0
2023-06-16 17:05:36 +02:00
b2283efd46
Install the Intel MPI libmpi.so into lib/
2023-06-16 17:05:09 +02:00
7f18deaf69
Update nixpkgs to d6b863fd to match nixos
2023-06-16 16:36:16 +02:00
b953fd4b2f
Update osu benchmarks to 7.1-1
2023-06-16 16:27:47 +02:00
080811fe9d
Add missing lib in osu benchmarks
2023-06-16 15:50:39 +02:00
e7647f1d99
Add pmix 4
2023-06-16 15:33:39 +02:00
aad2c276aa
Update intel mpi to 2021.9
2023-06-16 15:32:49 +02:00
ce5577f14e
Export intel-mpi from oneapi
2023-06-16 15:32:17 +02:00
e23392fccd
Set install dir variable for Intel MPI
2023-06-16 15:31:58 +02:00
dfbeafa2b2
Update rebuild script for all nodes
2023-06-16 12:13:07 +02:00
7d4281a5c1
Add ssh host keys
2023-06-16 12:01:12 +02:00
dfea0be2d9
Set the name of the slurm cluster to jungle
2023-06-16 12:00:54 +02:00
df91da8c34
Change owl hostnames
2023-06-16 11:42:39 +02:00
30c21155af
Add owl and all partition
2023-06-16 11:34:00 +02:00
a43016ebee
Simplify flake and expose host pkgs
...
The configuration of the machines is now moved to m/
2023-06-16 11:31:31 +02:00
801bb4ba3c
Rename xeon07 to hut
2023-06-14 17:28:40 +02:00
a9d740e95a
Remove profiles older than 30 days with gc
2023-06-14 17:28:39 +02:00
08eaf312f2
Add ncdu to system packages
2023-06-14 17:28:39 +02:00
0b57bbc6e3
Move arocanon user from xeon08 to common
2023-06-14 16:22:43 +02:00
6558a6ab77
xeon08: Add config for kernel non-voluntary preemption
2023-06-14 16:17:33 +02:00
0d196af473
xeon08: Add perf
2023-06-14 15:42:20 +02:00
d35becb663
xeon08: Enable lttng lockdep tracepoints
2023-06-14 15:42:20 +02:00
5421eab09a
xeon08: Add lttng module and tools
2023-06-14 15:42:20 +02:00
1c7de2f7c9
Serve grafana in https://jungle.bsc.es/grafana
2023-05-31 18:12:14 +02:00
c7692995f4
Add tree command
2023-05-31 18:11:34 +02:00
0af185afd8
Add file to system packages
2023-05-31 18:11:34 +02:00
470b3d2512
Add gnumake to system packages
2023-05-31 18:11:34 +02:00
1bf6747b3a
Add cmake to system packages
2023-05-31 18:11:34 +02:00
59bf51dfde
Add ix to common packages
2023-05-31 18:11:34 +02:00
f5dcaf831b
Update ovni to release and add useGit option
2023-05-30 16:44:39 +02:00
feb39f404a
Remove git attributes from derivation in nosv
2023-05-30 16:23:39 +02:00
11e897c10a
Always build nodes with ovni
2023-05-30 16:14:04 +02:00
1da216bab5
Add nodes release and git version
2023-05-30 15:31:56 +02:00
d8c19eb4b4
Add nos-v release by default
2023-05-30 15:31:12 +02:00
0e176cb2a9
Update OmpSs-2 clang to 2023.05
2023-05-30 14:52:42 +02:00
3a249c5d88
Update nanos6 and merge release with git
2023-05-30 14:51:36 +02:00
df32aa62d0
Update nanos6 to last release
2023-05-30 09:41:17 +02:00
b72d9936a2
Improve documentation
2023-05-26 11:38:27 +02:00
5ebb57deff
Add gitignore
2023-05-26 11:38:27 +02:00
5b82a72647
Set intel_pstate=passive and disable frequency boost
2023-05-26 11:38:26 +02:00
a5c7205481
Add xeon08 basic config
2023-05-26 11:38:26 +02:00
fd1b467a60
Add nixos-config.nix to easily enable nix repl
2023-05-26 11:29:59 +02:00
933cd1e3c7
Show commands being executed in clang test
2023-05-22 19:30:40 +02:00
5553ee79a9
Populate OMPSS2_RUNTIME in clang
2023-05-22 19:30:15 +02:00
bb6129a77e
Reduce ompss2 test verbosity
2023-05-22 13:55:23 +02:00
b8f7c16d1c
Use clang from git for NODES
2023-05-22 13:54:41 +02:00
3f4f3e1105
Export proper OmpSs-2 runtime home variable
2023-05-22 13:54:29 +02:00
a34e619333
Update Intel oneAPI
2023-05-19 18:52:32 +02:00
46a3465e78
Build clang with a new LLVM
...
Older LLVM 11 version produces a broken compiler, see:
https://pm.bsc.es/gitlab/llvm-ompss/llvm-mono/-/issues/183
2023-05-19 18:34:11 +02:00
1d788aeff2
Update bench6 to use cmake
2023-05-19 18:33:37 +02:00
9a500dd3d6
Update Nanos6 git with ./autogen.sh
2023-05-19 18:32:35 +02:00
0605bc4ceb
Add bench6 new dependencies
2023-05-18 20:40:29 +02:00
882161b21e
Automatically resume restarted nodes in SLURM
2023-05-18 12:48:04 +02:00
5e8ff50c98
Allow public dashboards in grafana
2023-05-09 18:53:31 +02:00
cdb0688ec1
Add hal ssh key
2023-05-09 18:37:38 +02:00
ebb5e94416
Increase the number of CPUs to 56 for nOS-V docker
2023-05-02 17:47:57 +02:00
89049d0b1f
Allow 5 concurrent buils in the gitlab-runner
2023-05-02 17:38:10 +02:00
6d16772d07
Simplify bash prompt
2023-04-28 18:15:04 +02:00
e37f9e2b0f
Roolback to bash as default shell
...
Zsh doesn't behave properly, it needs further configuration.
2023-04-28 17:59:19 +02:00
9767238c76
Use pmix by default in slurm
2023-04-28 17:07:48 +02:00
a5a0fd9b6f
Increase locked memory to 1 GiB
2023-04-28 12:34:51 +02:00
be69070f61
Use the latest kernel
2023-04-28 11:51:38 +02:00
53f6dcec8d
Disable osnoise and hwlat tracer for now
...
Reuse nix cache to avoid rebuilding the kernel.
2023-04-28 11:19:47 +02:00
87c4521de3
Update nixpkgs to nixos-unstable
2023-04-28 11:18:37 +02:00
461d6d2f34
Update nixpkgs
2023-04-28 11:13:46 +02:00
ef2ffa61c3
Update ib interface name in xeon02
...
It seems to be plugged in another PCI port
2023-04-27 18:29:32 +02:00
c0b23ad450
Add steps in install documentation
2023-04-27 17:30:53 +02:00
f12ba9f8b0
Add minimal netboot module to build kexec image
2023-04-27 16:36:15 +02:00
a211e9ebee
Add xeon02 configuration
2023-04-27 16:28:12 +02:00
5dbbb27c43
Refacto slurm configuration into compute/control
2023-04-27 16:27:04 +02:00
69bb2128db
Lock flakes and add inputs
2023-04-27 13:52:59 +02:00
c775ee4d6f
Add flakes support
2023-04-26 17:07:08 +02:00
de7cae6208
Test flakes
2023-04-26 14:27:02 +02:00
de4ac8cbd6
Enable slurm in xeon01
2023-04-26 14:10:36 +02:00
e1dcad50d0
Use xeon07 as control machine
2023-04-26 14:10:36 +02:00
0120be66fb
Remove xeon07 overlay to load upstream slurm
2023-04-26 14:10:36 +02:00
6cb079a44e
Add script to rebuild configuration
2023-04-26 14:09:23 +02:00
a5449067a7
Add configuration for xeon01
2023-04-26 11:44:00 +00:00
1009736d81
Load overlays from /config
2023-04-26 11:44:00 +00:00
a94765e8ae
Move net.nix to common
2023-04-26 11:44:00 +00:00
9630b23ce2
Remove host specific network options from net.nix
2023-04-26 11:44:00 +00:00
ed158ee87f
Move ssh.nix to common
2023-04-26 11:44:00 +00:00
480dd95d9b
Move overlays.nix to common
2023-04-26 11:44:00 +00:00
f7b18098b1
Move users.nix to common
2023-04-26 11:44:00 +00:00
c580254dde
Move common options from configuration.nix
2023-04-26 11:44:00 +00:00
7e6c395ff8
Move the remaining hw config to common
2023-04-26 11:44:00 +00:00
6978677cb5
Move boot config to common/boot.nix
2023-04-26 11:44:00 +00:00
f5b4580dae
Move filesystems config to common/fs.nix
2023-04-26 11:44:00 +00:00
035becd018
Use partition labels for / and swap
2023-04-26 11:44:00 +00:00
a7fb69ab92
Move fs.nix to common
2023-04-26 11:44:00 +00:00
733eb93f23
Move boot.nix to common
2023-04-26 11:44:00 +00:00
b60e821eaa
Move disk selection to configuration.nix
2023-04-26 11:44:00 +00:00
f43d549294
Add common directory
2023-04-26 11:44:00 +00:00
ef2631b699
Build paraver with wxGTK32
2023-04-11 20:34:11 +02:00
9d2de00b0c
Update Intel OneAPI package list
2023-04-11 20:33:50 +02:00
2627552a0f
Use python 3
2023-04-11 20:33:35 +02:00
03c7256767
Disable extrae as is broken
2023-04-11 20:32:49 +02:00
a46a2ee794
Update nixpkgs commit to match xeon07
2023-04-11 20:31:54 +02:00
94fa0de4fc
Add slurm 16.05.8.1 and hwloc 1.11.6
2023-04-02 21:39:30 +02:00
054d70d23b
Add bench6 package
2023-03-14 14:58:42 +01:00
91a5bdb344
Add comment about __noChroot in OmpSs-2 test
2023-03-14 10:32:59 +01:00
f148a71c6c
Print buildInputs in CI test derivation
2023-03-13 16:17:02 +01:00
243ed2331a
Add new package NODES
2023-03-13 16:16:34 +01:00
9fae434553
Enable -fPIC in Nanos6 loader
2023-03-13 16:08:38 +01:00
898534ee52
bsc: add nosv package
2023-03-13 14:58:59 +01:00
bf28263cc5
Add OmpSs-2 test with tasks
2023-03-13 14:54:40 +01:00
84623ea9d0
Use lld linker for clangOmpss2 for LTO
2023-03-06 11:47:01 +01:00
5753f0c312
Remove old files
2023-03-03 18:28:44 +01:00
b57a17dd52
Remove alya
2023-03-03 18:25:06 +01:00
115e9beb59
Add Intel oneAPI 2023 with compilation tests
2023-03-03 18:18:51 +01:00
fd84af45f0
Add Intel OneAPI 2022
2023-03-02 19:03:58 +01:00
833d58a875
intel: add libstdc++ as dependency for patchelf
2023-03-02 18:46:52 +01:00
Raúl Peñacoba
5789b4a77a
icc2021: added stdc++ includes
2023-03-02 18:46:52 +01:00
ef5e98e06d
icc2021: fix wrapper names and ldflags
2023-03-02 18:46:52 +01:00
a6549c1908
intel: add intel compiler 2021.2.0
2023-03-02 18:46:52 +01:00
180fa4c992
intel: remove unused nanos6 dependency
2023-03-02 18:46:52 +01:00
4cfad119ce
Update OmpSs-2 clang to 2022.11
2023-03-02 18:41:02 +01:00
a2e02bb136
Update mcxx to 2022.11
2023-03-02 18:40:57 +01:00
246aa8e7d1
Update Nanos6 to 2.8
2023-03-02 18:10:06 +01:00
f28817c3bf
Build wxparaver and paraver-kernel from github
2023-03-02 17:58:53 +01:00
bff0395872
Update mpich to follow upstream
2023-03-02 13:08:01 +01:00
d18a95f8ed
Update paraver to 4.10.6
...
Dropping wxpropgrid. Now it needs to link with openssl.
2023-03-02 12:47:25 +01:00
1a99a7eb73
Add more packages to CI
2023-03-02 12:08:02 +01:00
4b5a948918
Add PTR patch to Extrae
2023-03-02 12:03:12 +01:00
7ef24b88e4
Allow insecure packages
2023-03-02 11:46:27 +01:00
c28618b95c
Update extrae to 4.0.1
2023-03-02 11:43:35 +01:00
20c5446743
CI build with verbose flag
2023-03-02 11:17:39 +01:00
38220140ec
Update nixpkgs to release 22.11
2023-03-02 11:16:54 +01:00
f5987a0094
Add ci derivation
2023-03-02 11:15:25 +01:00
60b2f9f6cc
Enable CI builds
2023-03-02 11:14:47 +01:00
b60698b791
pkgs: update nixpkgs to 1614b96a
2023-03-02 10:38:43 +01:00
e57107024e
ovni: Update repository URL and unset commit
2022-07-25 14:50:34 +02:00
1ffca6c9e0
bsc: add ovni package
2022-07-25 14:50:18 +02:00
7d5e3f1845
nanos6: don't strip debug symbols
2022-04-05 15:40:08 +01:00
df7c79f34b
clangOmpss2: merge both nix files into one
...
Add clangOmpss2Git to the overlay overriding the src attribute of the
release nix derivation, so we only keep one derivation for both
variants.
2022-04-05 15:40:08 +01:00
a2195aef43
clangOmpss2: use relative path for BINDIR
...
Absolute paths are not supported and cause a silent error when
installing the clang++ and other symlinks. See:
d93a11c138
58580e922a
2022-04-05 15:40:08 +01:00
6e7a7febd4
clangOmpss2: wrap clang++ too
2022-04-05 15:40:08 +01:00
0b319b8a63
clangOmpss2: 2021.06 -> 2021.11
...
libelf is now replaced by elfutils
2022-04-05 15:40:08 +01:00
315cf1d0de
mcxx: update 2021.06 -> 2021.11
2022-04-05 15:40:08 +01:00
3e3ce35237
nanos6: update 2.6 -> 2.7
2022-04-05 15:40:08 +01:00
2227f08814
gpi-2 and tagaspi: enable parallel build
2022-04-05 15:34:10 +01:00
f74446b225
gpi-2: use last tagaspi tag
2022-04-05 15:33:30 +01:00
a5af7890b8
bsc: add GPI-2 and TAGASPI
2022-04-05 15:25:25 +01:00
Raúl Peñacoba
d2834624c2
paraver: enable OpenMP
2021-11-10 15:25:14 +01:00
35d19c262c
garlic: add tool to query experiments
2021-11-03 16:19:49 +01:00
c0362b6639
paraver: add fast version for ordered traces
2021-11-02 16:18:52 +01:00
08aabfa657
icc: renew license until 2026-12-31
2021-07-14 15:29:55 +02:00
762fe8b82c
wxpropgrid: disable parallel build
...
The parallel build fails with high probability due to incorrect
dependencies in the Makefile, which lead to an attemp to link too soon.
2021-07-12 18:38:10 +02:00
53d99d41cf
mcxx: use git tag for the 2021.06 release
2021-06-30 19:24:56 +02:00
9eb5c74cd6
mcxx: update 2.2.98 -> 2.2.98+da8945d0
2021-06-30 17:19:39 +02:00
aa083b1b66
clangOmpss2: update 2020.11 -> 2021.06
2021-06-30 16:44:30 +02:00
58fab3b87e
tampi: update 1.0.2 -> 1.1
2021-06-30 16:34:39 +02:00
f2c6a3cb15
nanos6: update 2.5.1 -> 2.6
2021-06-30 16:33:51 +02:00
b6d742380b
cn6: test slow converter
2021-06-30 15:54:31 +02:00
c083d96b79
cn6: add experiment with nbody
2021-06-28 11:50:53 +02:00
1a9b8470bb
cn6: add clock sync experiment
2021-06-22 15:36:49 +02:00
f9581cfb59
cn6: enable extra test utils
2021-06-22 15:36:49 +02:00
3be896d90d
mcxx: add mcxx from the git repo
2021-06-02 14:08:16 +02:00
4125e39ce0
nanos6: don't strip symbols
2021-06-02 12:41:47 +02:00
11a521ff51
nanos6: allow the git url and branch to be specified
2021-06-02 11:35:30 +02:00
fb2b3cbe06
sh: add garlic-add-copyright tool
2021-05-11 12:25:15 +02:00
776a6ca1e4
sh: add commit propagator tool
2021-05-10 17:01:54 +02:00
83921d1788
creams: increase granularity with size
2021-05-09 11:37:53 +02:00
b6f563f621
creams: add granularity experiment with 16 nodes
2021-05-09 11:36:43 +02:00
5d6f691045
creams: add size experiment
2021-05-03 15:02:57 +02:00
3892167e7d
creams: use python script to generate the input
2021-05-03 15:02:57 +02:00
6937ffcfe9
ds: link the resultTree in the dataset
2021-05-03 12:48:49 +02:00
760787858a
bsc: disable hardening in some packages
2021-04-22 12:07:15 +02:00
a4b8f8e94b
apps: disable hardening in all garlic apps
2021-04-21 18:23:27 +02:00
df62451fcd
sh: add helper script to fix the figure subtitle
2021-04-21 17:58:59 +02:00
a9e1579242
osu: remove gsub hack
2021-04-21 17:54:08 +02:00
d5626851de
osu: remove gsub hack and clean bw figure
2021-04-21 17:51:05 +02:00
5de45cb247
rplot: patch generated PDFs to use hyphen
...
The ISOLatin1 encoding uses /minus as char 45, while the (-) symbol used
in the paths is a /hyphen. This hack allows the paths in the generated
PDFs to be copied directly into a terminal.
2021-04-21 17:42:40 +02:00
92cd88e365
fig: use the $out path in the subtitle
...
The input dataset is not enough to determine which script produced a
given plot.
2021-04-21 13:40:25 +02:00
5a49611bf6
fwi: add gitTable to params
2021-04-20 18:51:36 +02:00
9fc2a2025c
lulesh: add gitTable
2021-04-20 18:42:19 +02:00
2cc0c85635
ifsker: remove preferLocalBuild
2021-04-20 18:20:59 +02:00
c075498f71
ifsker: add gitTable
2021-04-20 18:20:27 +02:00
Kevin Sala
e0197950a6
ifsker: update app
2021-04-20 18:15:56 +02:00
cafc67d107
hpcg: add gitTable
2021-04-20 18:12:17 +02:00
c0a0eeec7f
hpccg: fix indentation
2021-04-20 18:09:24 +02:00
fb1d50e9dd
hpccg: update app and add gitTable
2021-04-20 18:02:53 +02:00
a359cc9d32
nbody: add gitTable
2021-04-20 17:47:49 +02:00
1402111e40
saiph: add gitTable
2021-04-20 17:36:33 +02:00
9377adf787
fwi: add gitTable
2021-04-20 17:36:33 +02:00
20e99f122f
creams: use gitTable for all branches
2021-04-20 17:36:33 +02:00
53c098d921
heat: split the git table and use fetchGarlicApp
2021-04-20 17:36:33 +02:00
d2222f6868
sh: Format the git table in a single attribute set
2021-04-20 17:36:33 +02:00
dbdcfea019
tools: add fetchGarlicApp helper
...
Allows easy migration of the git server for all the apps and
reduces the boiler plate in the derivations.
2021-04-20 17:36:33 +02:00
375a79d27a
heat: pin commits using gitTable
2021-04-20 17:36:33 +02:00
2aa099f0e2
sh: add script to build the gitTable
2021-04-20 17:36:33 +02:00
600e1b9987
tools: add helper function to find the git commit
2021-04-20 17:36:33 +02:00
a4752603e9
cn6: pin commit
2021-04-20 17:34:53 +02:00
5b4bb30e55
nbody: update and simplify figures
2021-04-20 17:16:17 +02:00
e1433fedb8
nbody: refactor experiments into common.nix
2021-04-20 17:13:29 +02:00
f729fc4006
nbody: rename granularity experiment file
2021-04-19 17:27:52 +02:00
Antoni Navarro
03298228e4
nbody: add strong scaling experiment
2021-04-19 17:27:52 +02:00
Antoni Navarro
58294d4467
nbody: add "nodes or sockets" experiment
2021-04-19 17:27:52 +02:00
Antoni Navarro
48a61dc292
nbody: update indexes
2021-04-19 17:27:52 +02:00
Antoni Navarro
5815a9af09
nbody: move "old" experiments to another folder
2021-04-19 17:27:52 +02:00
Antoni Navarro
ea66d7e4e0
nbody: update granularity tests
2021-04-19 17:27:52 +02:00
3e197da8a3
hpcg: update figures and remove old ones
2021-04-19 16:05:10 +02:00
866d4561d3
hpcg: remove old experiments
2021-04-19 16:01:11 +02:00
9a88319153
hpcg: add granularity experiment
2021-04-19 16:00:55 +02:00
a96839d11a
hpcg: merge weak scaling and add size experiment
...
The scaling.nix file defines both the strong and weak experiments by
using the parameter "enableStrong".
2021-04-19 15:57:31 +02:00
a71ae9c2c6
hpcg: avoid mismatching names for gen units
2021-04-16 16:15:16 +02:00
d490ef2694
hpcg: remove unused extrae.xml file
2021-04-16 16:14:48 +02:00
b4e37a15a9
hpcg: refactor ss and gen using a common file
...
- The file gen.nix now provides an experiment for each unit, to reduce
the evaluation time.
- The pipeline is specified in the common.nix file only.
- The input dataset path is no longer symlinked, but is specified in the
"--load" argument.
- The size is renamed to "sizePerTask" instead of "n".
2021-04-16 11:51:34 +02:00
9bb570af7f
tools: add floatTruncate function
2021-04-16 11:49:37 +02:00
Raúl Peñacoba
4d629fe8f7
hpcg: remove old comments
2021-04-16 09:32:28 +02:00
Raúl Peñacoba
f5c8d0cb88
hpcg: choose a smaller strong scaling problem size
2021-04-16 09:32:28 +02:00
Raúl Peñacoba
cb6577b439
hpcg: add strongscaling
...
HPCG rounds problem size axis when its value is < 16
2021-04-16 09:32:28 +02:00
Raúl Peñacoba
b60a46b683
hpcg: add weakscaling over some nblocks to check which axis is better
2021-04-16 09:32:28 +02:00
Raúl Peñacoba
1a6075a2b1
hpcg: add first granularity/scalability exps for tampi+isend+oss+task
...
- oss.nix runs valid hpcg layouts whereas slices.nix does not
2021-04-16 09:32:28 +02:00
12ff1fd506
garlicd: send logs to the builder
2021-04-16 09:29:33 +02:00
732b0c0e9c
garlic tool: improve unit status information
2021-04-16 09:29:33 +02:00
64f077c4f6
stages: prepend the stage name to messages
2021-04-16 09:29:33 +02:00
7c94997023
control: add trap for bad exit
2021-04-16 09:29:33 +02:00
fb0dee4b61
exp: move exit1 experiment to slurm
2021-04-16 09:29:33 +02:00
bde54c69c5
sbatch: store queued status
2021-04-16 09:29:33 +02:00
2151e20bd6
exp: add exit1 experiment
...
Tests unit bad exits
2021-04-16 09:29:33 +02:00
886d16bcc6
garlic tool: add jq as dependency
...
So we can parse the experiment configuration in JSON
2021-04-16 09:29:33 +02:00
5c0f179830
stdexp: rename "name" to "clusterName"
2021-04-16 09:29:33 +02:00
422d359b48
script: stop on error by default
2021-04-16 09:29:33 +02:00
60248ab06b
article: remove not used figures
2021-04-16 09:29:33 +02:00
1cb63b464d
osu: adjust figures for publication
2021-04-16 09:29:33 +02:00
821b4f0d15
rplot: patch scales and fontconfig
2021-04-16 09:29:33 +02:00
0cf35decc5
osu: add mtu and eager experiments
2021-04-16 09:29:33 +02:00
26e3a86c78
garlic tool: check the presence of all the units
...
This check prevents a user from removing units between the
execution of the experiment and the fetch.
2021-04-16 09:29:33 +02:00
b96c39e0ba
noise: add srun signal bug to the list
2021-04-16 09:29:33 +02:00
f842f1e01d
slurm: add sigsegv experiment
...
Ensure that we can catch a sigsegv signal before and after the
MPI_Finalize call.
2021-04-16 09:29:33 +02:00
71c06d02da
stages: add baywatch stage to check the exit code
...
This workaround stage prevents srun from returning 0 to the upper stages
when a signal happens after MPI_Finalize. It writes the return code to a
file named .srun.rc.$rank and later checks that exists and contains a 0.
When the program is killed, exits with non-zero and the error is
propagated to the baywatch stage, which aborts immediately without
creating the rc file.
2021-04-16 09:29:26 +02:00
604cfd90a3
test: add sigsegv after MPI_Finalize test
...
The current srun version used in MN4 returns 0 if the program crashes
after MPI_Finalize, as shown by this test.
2021-04-16 09:28:02 +02:00
07253c3fa0
fwi: update figure index
2021-04-14 17:18:46 +02:00
eab323a13a
fwi: update io figure
2021-04-14 17:18:24 +02:00
8ce2a68cd7
fwi: update strong scaling figure script
2021-04-14 17:16:12 +02:00
99c6196734
fwi: update granularity figure
2021-04-14 17:05:09 +02:00
dd75a840ce
fwi: use enableIO instead of ioFreq
2021-04-12 20:09:17 +02:00
e49e3b087f
fwi: rename big io experiment
2021-04-12 19:49:31 +02:00
59040d9355
fwi: fix inverted resources
2021-04-12 19:31:35 +02:00
6422741cb7
fwi: merge io experiments into one file
...
The enableExtended parameter control if the experiment runs with
multiple nodes or only one.
2021-04-12 19:27:45 +02:00
99beac9b23
fwi: generate the model in every node
...
As we are using local storage, we need a copy of the input in every
node. The current method is to run the generator only in the rank which
has assigned the cpu 0 in the mask.
2021-04-12 19:01:10 +02:00
58dc277d3d
fwi: refactor ss-io with common.nix
...
Also, keep the names short and consistent.
2021-04-12 17:57:46 +02:00
47b326c646
fwi: generate the input at runtime
2021-04-12 17:46:07 +02:00
419e7f95cc
fwi: avoid input generation
...
The ModelGenerator is now included in the fwi-params, so that the input
can be generated at runtime.
2021-04-12 17:43:30 +02:00
b0af9b8608
srun: add postSrun hook
2021-04-12 17:41:59 +02:00
4afda7dbfb
fwi: use common.nix in sync_io experiment
2021-04-12 16:27:18 +02:00
02a103565c
fwi: use common.nix in reuse experiment
2021-04-12 15:48:59 +02:00
788dd13ebd
fwi: merge mpi pure experiment
...
The getResources function is used to assign the proper cpu binding
depending on the version. However, additional contraints are required to
ensure that we have enough points in Y.
By default the mpi+send+seq branch is disabled.
2021-04-12 15:37:39 +02:00
41665bc6fc
fwi: refactor config generation into common.nix
2021-04-12 15:01:25 +02:00
9aa07993b2
fwi: refactor ss and granularity experiments
...
A common.nix file contains the shared stages
2021-04-12 14:41:26 +02:00
e0a68c077c
fwi: merge forkjoin ss experiment into one file
...
Additional options are only active with enableExtended = true
2021-04-12 12:51:10 +02:00
989f6ee018
fwi: adjust input size to meet timing constraints
...
The previous iniput size for both granularity and strong scaling tests
where too big to meet the timing constrains needed for garlic. This
patch sets a new, smaller, input size.
Also, a minor cleanup is applied to the rest of the fwi experiments
and figures.
2021-04-07 12:44:14 +02:00
3e5a56ebdb
fwi: add tampi non-blocking variant
2021-04-07 12:44:14 +02:00
3ef4a505d3
fwi: add strong scalability tests
2021-04-07 12:44:14 +02:00
aadce016e1
fwi: add granularity and data reuse experiments
...
The data reuse experiment shows the effect of poor data locality versus
task granularity.
2021-04-07 12:44:14 +02:00
1d9a5c4721
fwi: fix input derivation
...
The fwiInput derivation must be the same used when compiled the fwi app
as the fwi-input used in the experiment.
2021-04-07 12:44:14 +02:00
11e400abb5
fwi: remove old experiment
2021-04-07 12:44:14 +02:00
a8477b1b05
fwi: add test figure with the time
2021-04-07 12:44:14 +02:00
7a6cbd3a9e
fwi: update test experiment
2021-04-07 12:44:14 +02:00
3de7b5a0b6
fwi: save the params and frequencies files
2021-04-07 12:44:14 +02:00
485b9150e5
fwi: add problem size parameters
2021-04-07 12:44:14 +02:00
fa0e9f591f
fwi: update repo url to PM server
2021-04-07 12:44:13 +02:00
de175b2380
fwi: fix input name
2021-04-07 12:44:13 +02:00
bfbbc294ae
fwi: split into input and solver
...
All branches compile with several hacks.
2021-04-07 12:44:13 +02:00
9bea3cc264
fwi: add oss experiment
2021-04-07 12:44:13 +02:00
f10f8472ac
fwi: add seq test experiment
2021-04-07 12:44:13 +02:00
26ad3e49f7
fwi: add gitBranch and copy params
2021-04-07 12:44:13 +02:00
312656ce54
heat: rename granul -> granularity experiment
2021-04-06 18:42:49 +02:00
63aa07dad5
heat: update granularity plot with modern ggplot
2021-04-06 18:40:19 +02:00
d1c32869c1
heat: split granularity with extended mode
...
The HWC version is not yet complete.
2021-04-06 18:38:15 +02:00
3566cf0152
develop: add paraver package
2021-04-06 11:14:30 +02:00
0b7e92b6f9
heat: add bar plot with time distribution
2021-04-06 11:05:56 +02:00
f8122f3c8b
heat: use the hcut tool to limit the cpus
2021-04-06 11:05:56 +02:00
699404bafe
bsc: add cpuid program
2021-04-06 11:05:56 +02:00
d68ce914ba
heat: use cut to partition the trace
...
The awk script doesn't take in consideration the events close to the cut
points, which are significative with low parallelism.
2021-04-06 11:05:51 +02:00
cb482fa3ea
heat: remove perf from the ctf experiment
...
As we would be extracting perf stats from the trace processing steps.
2021-04-06 11:05:10 +02:00
3c150d3910
doc: add contributing file
2021-04-06 10:50:39 +02:00
8a97fefafa
saiph: simplify and update figure scripts
2021-04-01 19:25:38 +02:00
10b1ff8f7a
saiph: simplify granularity and ss experiments
2021-04-01 19:25:38 +02:00
0e0f1b265f
saiph: add extra parameters for the app
2021-04-01 19:25:38 +02:00
5ea9ff5ad8
machines: add cache sizes
2021-04-01 19:25:38 +02:00
Sandra
2b36e33b7e
saiph: modify apps parameters
2021-04-01 19:25:37 +02:00
Sandra
b64b864194
saiph: clean exps and figs
2021-04-01 19:25:37 +02:00
Sandra
72e7a8dab7
shell: add clangOmpss2 and gdb
2021-04-01 19:25:24 +02:00
Sandra
46536548ca
saiph: update scaling exp and figures
2021-04-01 19:24:38 +02:00
Sandra
8406c1c4e5
saiph: add total number of local blocks (#tasks) parameter
2021-04-01 19:24:38 +02:00
Sandra
bc912162a0
index: add vtk and boost
2021-04-01 19:24:38 +02:00
Sandra
4e727bf632
shell: add nix-diff
2021-04-01 19:24:38 +02:00
Sandra
5c7af00dfa
saiph: add debug/asan flags parameters
2021-04-01 19:24:38 +02:00
Sandra
5caf2f79f3
saiph: change scaling R script
2021-04-01 19:24:38 +02:00
Sandra
a90c044c3e
saiph: add manual global blocking
...
Ensure cuts in a single dimension
2021-04-01 19:24:38 +02:00
Sandra
99532c9c60
saiph: add manual distribution and nbl/nbg
2021-04-01 19:24:34 +02:00
Sandra
ddef901e2f
saiph: add nsteps parameter to experiments
2021-03-30 18:54:35 +02:00
Sandra
1ae5acfe6a
saiph: add nsteps in saiph app
2021-03-30 18:54:35 +02:00
d108306a29
saiph: add blocking experiments to index
...
Remove unused environment variables as well.
2021-03-30 18:54:35 +02:00
e0fbbe32a6
saiph: update granularity experiment and R script
2021-03-30 18:54:35 +02:00
Sandra
37e11c749f
saiph: add cacheline compilation parameter
2021-03-30 18:54:35 +02:00
Sandra
02a62c18ac
saiph: add strong scaling experiment
2021-03-30 18:54:35 +02:00
Sandra
0ac0205366
saiph: add figures for blocking experiment
2021-03-30 18:54:35 +02:00
Sandra
a2306eb941
saiph: add some blocking experiments
2021-03-30 18:54:35 +02:00
Sandra
38d4d0b48c
saiph: delete extrae XML configuration files
2021-03-30 18:54:35 +02:00
63b08fa4e8
saiph: use nby for granularity plot
2021-03-30 18:54:35 +02:00
992af14c7f
saiph: add scaling experiment
2021-03-30 18:54:35 +02:00
99f3326609
saiph: allow custom gitCommit
2021-03-30 18:54:35 +02:00
a4b2dfddb4
saiph: update granularity experiment
2021-03-30 18:54:35 +02:00
830d648925
saiph: reduce the number of loops
...
The current app Heat3D_vect has a long initialization time
2021-03-30 18:54:16 +02:00
e4ab177d6c
saiph: remove dangerous Intel MPI envvar
...
It is no longer used, as we have moved to the release library version.
2021-03-30 17:56:26 +02:00
b7dcf7bc69
rplot: add support for gziped datasets
2021-03-30 16:35:47 +02:00
5ac581b573
creams: remove pure mpi from granularity
2021-03-30 16:14:32 +02:00
b900cb95f0
creams: make configurations unique
2021-03-30 16:14:11 +02:00
389d3f6310
creams: simplify granularity figure
2021-03-30 16:07:14 +02:00
76deac0a63
creams: update figures using one single pipeline
2021-03-30 15:59:52 +02:00
87f751185c
creams: merge similar experiments together
...
Large experiments have the enableExtended parameter disabled by default,
which enables more tests.
2021-03-30 15:55:57 +02:00
ec056d97e5
rplot: add total job time in the plots
2021-03-30 15:49:40 +02:00
872ad1a289
stdexp: allow preSrun attribute in the srun stage
...
This option allows an experiment to inject commands before srun starts,
while keeping the standard srun stage options.
2021-03-29 17:46:19 +02:00
Pedro Martinez
617ef21d38
creams: redefine granularity figures
2021-03-24 13:52:26 +01:00
Pedro Martinez
5cd9894636
creams: redefine granularity experiments
2021-03-24 13:52:26 +01:00
Pedro Martinez
bfc32ef4b7
creams: readjust granularity for strong scalability
2021-03-24 13:52:26 +01:00
Pedro Martinez
cb4d27aefb
creams: bugfix in granularity values
2021-03-24 13:52:26 +01:00
Pedro Martinez
d27c696259
creams: reduce granularity combinations to 8
2021-03-24 13:52:26 +01:00
Pedro Martinez
a55019c6ef
creams: add more nodes for granularity experiments
2021-03-24 13:52:26 +01:00
8a81c6bfba
creams: add granularity figure
...
Only the hybrid experiment is used by now
2021-03-24 13:52:26 +01:00
c59f298ae2
creams: reduce granularity experiment units
2021-03-24 13:52:26 +01:00
6818b29d02
creams: fix outdated nanos6.toml
...
This temporal fix allows the experiment to ignore the nanos6.toml in the
git repository, and only set version.dependencies variable.
2021-03-24 13:52:26 +01:00
Pedro Martinez
8445fb0928
creams: run the cp command in one process only
2021-03-24 13:52:26 +01:00
Pedro Martinez
1aa0e77157
creams: avoid race condition
...
Ensure only one Slurm process performs environment operations
2021-03-24 13:52:26 +01:00
Pedro Martinez
938246322f
creams: add OpenMP branches
2021-03-24 13:52:26 +01:00
Pedro Martinez
6c0f4ec1b3
creams: add granularity experiments
2021-03-24 13:52:26 +01:00
46f7add84c
garlicd: use head instead of the read builtin
...
It seems that bash is unable to propagate the SIGINT while
reading from the FIFO. This fixes the anoying ^C^C^C problems
found when running garlicd.
2021-03-22 18:43:01 +01:00
87fa3bb336
sbatch: assert types to avoid silent parse errors
2021-03-19 16:37:31 +01:00
9c8282362a
cn6: use install target from the Makefile
...
The PREFIX must be set both at build and install time.
2021-03-19 11:39:58 +01:00
74cd3d4fbc
rplot: fix fontconfig warning
2021-03-12 19:53:24 +01:00
c41456412c
examples: Add granularity examples
2021-03-12 19:33:40 +01:00
f0ae0df341
Add MIT license
2021-03-12 13:57:22 +01:00
9d38a37787
doc: link to the user guide in the readme
2021-03-12 13:28:05 +01:00
7d66b34140
nbody: fix converter rename in nanos6 CTF options
2021-03-12 12:58:41 +01:00
0781e8b28e
nbody: remove jemalloc experiments
...
Nanos6 has jemalloc enabled by default
2021-03-12 12:58:41 +01:00
88087bb4b7
nbody: add time-node plot
2021-03-12 12:58:41 +01:00
637c57b388
nbody: improve unit name
2021-03-12 12:58:41 +01:00
26ab2d9bbd
nbody: fix indentation in baseline R script
2021-03-12 12:58:41 +01:00
133ef50bb4
nbody: show time points
2021-03-12 12:58:41 +01:00
3a2694ad36
nbody: add mpi branch in scaling experiment
2021-03-12 12:58:37 +01:00
5804b167db
nbody: add scaling figure
2021-03-12 12:57:01 +01:00
425479c9fc
nbody: add scaling experiment
2021-03-12 12:57:01 +01:00
a286488979
rplot: add egg package for ggarange function
2021-03-12 12:56:58 +01:00
d70adae9ec
heat: add figure for the mode experiment
2021-03-12 12:14:51 +01:00
854707103c
heat: add ctf stage to analyze mode times
2021-03-12 12:13:10 +01:00
972be56eed
heat: patch to print the start and end time
...
It will be used to cut the CTF traces to take only the computation part
in cosideration.
2021-03-12 12:11:24 +01:00
56c625bfe4
ds: add ctf mode analysis
2021-03-12 12:10:18 +01:00
968accd552
cn6: install dur utility for extracting statistics
2021-03-12 12:09:02 +01:00
3445a72686
garlic tool: copy recursively from .garlic/
...
It allows an experiment to store a CTF trace in the resultTree (which is
not recommended for large traces).
2021-03-12 11:13:35 +01:00
f68564efe6
nanos6: add debug version for for libstdc++
2021-03-11 17:57:50 +01:00
4780a81d70
nanos6: add patch to use CLOCK_MONOTONIC in CTF
2021-03-11 17:57:50 +01:00
b192fc44f5
heat: refactor cache into granul experiment
2021-03-09 18:45:33 +01:00
7b4da07dbf
heat: add more figures from perf counters
2021-03-09 18:21:59 +01:00
3bcbc62a98
fig: add fig.heat.cache to fig.article
2021-03-09 18:21:22 +01:00
52360c9459
rplot: add viridis R package
2021-03-09 18:20:40 +01:00
71a1396955
ds: parse time with perf generator
2021-03-09 11:07:19 +01:00
b600f64fcc
heat: add cache miss experiment and figure
2021-03-05 18:31:31 +01:00
14fbb1499b
ds: add perf stat parser
...
We can only read one output file by now, located at:
.garlic/perf.csv
2021-03-05 18:29:43 +01:00
c1efba1e65
heat: rename test -> granul experiment
2021-03-05 18:28:32 +01:00
29d7245135
heat: add figure with heatmap
2021-03-05 16:21:13 +01:00
363700eb9a
heat: update test experiment
2021-03-05 16:18:51 +01:00
7e10a43b40
heat: update new app version
...
The blocksize is now specified at runtime
2021-03-05 16:16:06 +01:00
c4e49ea249
llvm-ompss2: update to last commit d2d451fb
2021-03-04 12:43:17 +01:00
d4ca58db2c
mcxx: update to tag 2.2.98
2021-03-04 12:42:44 +01:00
d5912c3889
tampi: update to last commit
2021-03-03 19:06:25 +01:00
cb12aa2d94
nanos6: enable jemalloc by default
2021-03-03 19:05:33 +01:00
5fae560ce9
nanos6: update 2.5 -> 2.5.1
2021-03-03 19:05:03 +01:00
6b6b54f757
timetable: add total_time column
2021-03-03 19:00:36 +01:00
b79951c9fe
bsc: add new package lmbench
2021-03-03 17:43:09 +01:00
c684b1870a
osu: update 5.6.3 -> 5.7
2021-03-03 17:41:05 +01:00
5afe819724
osu: add impi figure
2021-03-03 12:42:19 +01:00
651d91ef79
fig: improve indentation
2021-03-03 12:42:19 +01:00
14211c9895
osu: use ggsave and reduce verbosity
2021-03-03 12:42:19 +01:00
6973f48638
osu: add an experiment for Intel MPI tunning
2021-03-03 12:42:19 +01:00
4786953eeb
garlic: fix self/super with correct scope
...
The callPackage function was trying to find packages in bsc.self before
the self of the input parameters.
2021-03-03 12:42:19 +01:00
a6815dc7cf
fig: add article figure directory
2021-03-03 12:41:31 +01:00
6f2375804d
nixtools: pin commit
2021-03-03 11:53:12 +01:00
4ffb609261
osu: add figures using the fast generators
2021-03-01 12:21:10 +01:00
1d015c7e1e
ds: add osu fast generators
2021-03-01 12:00:58 +01:00
ed932c9921
osu: add bw test
2021-03-01 11:58:23 +01:00
a36d912022
osu: add multithread benchmark
2021-03-01 11:55:13 +01:00
8373751f67
rplot: remove suffix from input link
...
We may have compressed input datasets
2021-03-01 11:41:28 +01:00
2f7032aca6
pp: remove unused derivations and helpers
2021-03-01 11:40:56 +01:00
6dd41fd96f
fig: use the fast timetable generator by default
2021-03-01 11:38:28 +01:00
09a0348b0e
ds: add fast timetable generator
2021-03-01 11:16:03 +01:00
051a74b85d
srun: allow commands to run before srun
2021-02-26 17:00:09 +01:00
8a77900201
srun: don't expand variables on install
2021-02-26 16:59:29 +01:00
1291b90b7f
user guide: correct typo
2021-02-26 12:18:50 +01:00
8e130604aa
machines: set the hardware revision for MN4
...
This change will cause a rebuild of all experiments.
2021-02-25 20:45:20 +01:00
0015c7e4cd
pp: remove launcher
...
It has now been integrated with resultTree in pp/store.nix
2021-02-25 12:29:12 +01:00
9612c69aec
doc: add garlic configuration section
...
Update the garlicd usage as well.
2021-02-25 11:38:29 +01:00
6e0e2f0bf6
garlicd: drop bscpkgs argument requirement
...
The bscpkgs/default.nix is not longer read, as the garlic tool only
needs it for the fetching (-F), when it runs nix-build.
2021-02-25 11:38:29 +01:00
48820ee2d3
resultTree: garlic must be used from the nix shell
2021-02-25 11:38:29 +01:00
9277e60079
timetable: enable verbose processing
2021-02-25 11:38:29 +01:00
c869b6e3b4
garlic: enable verbose rsync fetch
2021-02-25 11:38:29 +01:00
0b95ea20b7
garlicd: allow manual experiment executions
2021-02-25 11:37:58 +01:00
ceb25e5d18
osu: add figure for latency tests
2021-02-23 17:52:48 +01:00
0c9e89dcc0
osu: update experiments using stdexp
2021-02-23 15:22:56 +01:00
ebcbf91fbe
exec: allow manual specification of program path
2021-02-23 15:22:18 +01:00
3e2b369e3e
garlicd: allow nix builders write to the pipes
2021-02-17 10:28:34 +01:00
d4947a40b9
Fix ssh missing shell
2021-02-17 10:28:11 +01:00
243d022620
cn6: update name and add to the shell
2021-02-15 17:44:20 +01:00
0ee2747215
garlicd: avoid no match fail
...
We check the result in the next if.
2021-02-15 16:32:06 +01:00
5fd2a62684
doc: update garlicd usage from the nix-shell
2021-02-15 16:22:45 +01:00
0e0bf9e7a7
garlic: add shell with the garlic tools
2021-02-15 16:22:06 +01:00
cb5bcd7097
garlicd: add to index and check for error
...
The garlicd is now available under garlic.garlid and it requires the
extra-sandbox-path option to be properly set.
2021-02-15 16:20:06 +01:00
d51fe5db48
garlic tool: ensure the mountpoint is enabled
2021-02-15 16:18:21 +01:00
c36b724e9a
Add experimental garlicd doc
2021-02-15 13:00:19 +01:00
cdf48181e5
user guide: add time measurement sections
2021-02-08 19:05:46 +01:00
a6b7b14d5e
user guide: add initialization time limit
2021-02-08 19:05:46 +01:00
2ca58c46b4
user guide: Add postprocessing section
2021-02-08 19:05:46 +01:00
25208a8158
user guide: add tar.gz target for the web
2021-02-08 19:05:19 +01:00
c46feb4bf2
user guide: use ms macros
...
Added HTML output
2021-02-08 19:05:19 +01:00
4d626bff97
user guide: test ms macros
2021-02-08 19:05:19 +01:00
042876a287
user guide: generate html with css
2021-02-08 19:05:19 +01:00
edd71815eb
pp: fix code block for html
2021-02-08 19:05:19 +01:00
39c360b413
user guide: add readme and branch name conventions
2021-02-08 19:04:51 +01:00
3ce0d3934b
user guide: reorder development
2021-02-08 19:04:45 +01:00
60cab85fc4
user guide: expand the develop section
2021-02-08 19:04:36 +01:00
95809bd2bf
user guide: add stub with mm macro
2021-02-08 19:04:30 +01:00
e5561b8735
control: save total execution time
2021-02-08 14:14:08 +01:00
ed1cd75d56
impi: update 2019.9.304 -> 2019.10.317
2021-02-05 10:16:57 +01:00
d4dfbb7501
Remove garlic.ds attribute
...
Datasets are now handled directly when creating the figures, via the
timetable attribute.
2021-02-03 15:34:25 +01:00
b65a442cb0
fig: use timetable attribute in other plots
2021-02-03 15:34:10 +01:00
9c6b7a9f87
timetable: missing quote
2021-02-03 13:51:24 +01:00
d84ccf566b
launcher: fix typo
2021-02-03 13:51:04 +01:00
0faf22a43f
fig: add nbody example using timetable attribute
2021-02-03 13:07:55 +01:00
e89139284a
stdexp: add result and timetable targets
...
These targets allow one experiment to directly refer to another
experiment results, thus a dependency chain can be formed to ensure
execution order.
It also simplifies the dataset definition, as they can be automatically
fetched from the experiment directly.
2021-02-03 12:37:54 +01:00
b453c12253
pp: Add automatic launcher
2021-02-03 12:36:59 +01:00
32d8636ae1
timetable: prevent empty time lines
2021-02-03 12:27:23 +01:00
e4e427b7f6
garlicd: add daemon to launch experiments
2021-02-03 12:08:25 +01:00
fe760c0023
garlic: sent trebuchet output to stderr
2021-02-03 11:50:31 +01:00
4591eca1fd
garlic: Add blackbox diagram
2021-02-01 11:11:54 +01:00
9beda65778
lulesh: add experiment with all variants
2021-01-28 15:27:21 +01:00
0f62151dcf
lulesh: follow garlic git branches
2021-01-28 15:27:21 +01:00
0bc81c8943
tools: add range2 function
2021-01-28 15:00:43 +01:00
a3804e31f2
develop: Simplify packages
2021-01-26 14:59:57 +01:00
ed4a9e1bc3
Add branch diagram
2021-01-25 17:54:24 +01:00
57c60821ce
icc: Update url
...
Fixes #87
2021-01-25 15:25:42 +01:00
1e84dc196a
ctfast: Add experimental ctf conversor
2021-01-18 18:43:26 +01:00
3d0e93b4d3
Add slides pdf
2021-01-14 13:06:20 +01:00
8262fd3104
Add slides for meeting 3
2021-01-13 20:19:28 +01:00
2b9c3da911
Add script stage
2021-01-12 18:19:49 +01:00
aeac1a6068
exec: Force newlines
...
Allow single line commands like pre="true"
2021-01-11 19:15:37 +01:00
130fe39c8e
exec: Abort on error
...
We need exit on the first error, as otherwise we cannot track a bad
execution when no exec is done (when post is not empty).
2021-01-11 18:29:30 +01:00
5c2bd13c3d
Add unstable nix for MN4
...
Fixes the fallocate problem
2021-01-11 16:42:30 +01:00
140598a28b
Pin nixpkgs
2021-01-11 16:41:56 +01:00
892fb35d27
nbody: Fix infinite recursion
...
We want to override the previous layer (super), not the last one (self).
2021-01-11 14:30:12 +01:00
afd333adef
creams: fix indentation
2020-12-18 12:43:06 +01:00
76f2ef4b95
creams: add figures for scalability
2020-12-18 12:26:40 +01:00
ed5f6bc22b
nanos6Git: Correct typo
2020-12-17 15:27:50 +01:00
3b80c2fcb9
creams: Merge hybrid and pure datasets into ss.all
2020-12-17 15:26:25 +01:00
b5cadefca9
Allow a space before time tag
...
This matches the fortran format for creams
2020-12-17 15:24:23 +01:00
Pedro Martinez
203dc9f295
Configure the nanos6 environment and get the right hardware attributes
2020-12-15 19:34:49 +01:00
Pedro Martinez
2e18761b48
Use the 'hw' attributes
2020-12-15 19:11:29 +01:00
Pedro Martinez
748d335a39
Define variables 'ntasksPerNode' and 'cpusPerTask' for each experiment and other minor changes
2020-12-15 19:11:29 +01:00
9646a1298d
Fix propagation of bsc.extend
...
Fixes #82
2020-12-11 17:15:05 +01:00
5a8cc1e514
stdexp: Run python snippets and import the result
2020-12-10 15:41:49 +01:00
7d4db6b6de
control: Exit on error
...
This prevents srun from silently returning with an error, without
actually queueing the job of a run.
2020-12-07 16:33:40 +01:00
756c5dff92
Update PM git server
2020-12-07 13:47:17 +01:00
9a0ea08d72
Reorganization
...
- All garlic stuff is moved into garlic/
- Group the overlay index by sections
- Add a garlic/default.nix link to the main default.nix, so we can
build derivations at garlic/
2020-12-07 13:33:42 +01:00
a8db596b35
Add lulesh and hpccg again
2020-12-04 11:26:18 +01:00
90d7c83261
Add a hwloc test
2020-12-04 11:18:44 +01:00
d70316a25a
fwi: disable nanos6 in ModelGenerator
2020-12-04 11:17:15 +01:00
eb4adf9520
ifsker: initial version
2020-12-03 18:49:28 +01:00
266fffdb5f
miniamr: initial version for OmpSs-2
2020-12-03 18:09:47 +01:00
f65e4d01c3
Simplify compiler name variables
2020-12-03 18:06:51 +01:00
53d8e535b5
clang: Use llvm 11 by default
2020-12-03 16:59:51 +01:00
1bdeca9e7d
unit: Remove dangerous slash from index names
2020-12-03 16:33:48 +01:00
5e9adf3fe6
nbody: Fix x label
2020-12-03 13:22:48 +01:00
c858f521bf
isolate: add $TMPDIR in the namespace
2020-12-03 13:22:10 +01:00
bdaadd4ef7
nbody: add ctf tests
2020-12-03 13:20:40 +01:00
b8a1ea3f72
develop: Fix inputrc missing key codes
2020-12-03 13:09:42 +01:00
eea9539258
develop: Set shell and hisfile
2020-12-03 12:14:04 +01:00
3dbb24dd9e
develop: add more tools
2020-12-03 12:05:24 +01:00
da4bbf8533
isolate: only load some files from /etc
2020-12-03 12:04:51 +01:00
df1f22c122
develop: support for srun
2020-12-02 13:38:43 +01:00
f87d830218
isolate: preserve TERM
2020-12-02 13:06:55 +01:00
3d352fee19
isolate: allow argument passing
2020-12-02 13:06:35 +01:00
284662d6cd
develop: fix bash PS1
2020-12-02 12:22:20 +01:00
84a8060bc5
intel: Upgrade expired license
2020-12-02 12:13:34 +01:00
1340d1d2e8
develop: Experimental interactive support
2020-12-02 11:58:00 +01:00
1f841649f8
exec: add support for nixPrefix
2020-12-02 11:57:40 +01:00
8d5853bba9
Add vite and otf packages
2020-11-30 20:23:44 +01:00
dd5832b39d
Fix nanos6 jemalloc typo
2020-11-30 20:08:59 +01:00
ad7c04845b
Add paraverExtra with some patches
2020-11-30 20:07:59 +01:00
6483d645d1
babeltrace2: enable parallel build
2020-11-27 20:13:11 +01:00
4000dbd0b8
Rename slides and generalize makefile
2020-11-24 18:05:16 +01:00
6fa3facfb1
Preliminar version for the slides
2020-11-24 17:58:14 +01:00
ed95cb0a04
Add wip presentation
2020-11-23 19:06:15 +01:00
aca7e36fc7
bigsort: add experiment with input generation
2020-11-20 15:41:27 +01:00
0bb5c76aad
bigsort: add extra programs
2020-11-20 15:40:17 +01:00
2153e58baf
bigsort: add the shuffle program
2020-11-20 15:39:34 +01:00
ceeb0f7f41
bigsort: add genseq program
2020-11-20 15:38:26 +01:00
a147a396d9
trebuchet: add the experiment as attribute
2020-11-20 15:35:36 +01:00
8bc5656461
tools: recursive getExperiment
...
It allows getExperimentStage to be called from any stage above the
experiment.
2020-11-20 15:34:14 +01:00
d192a59fdc
control: Export the run iteration
2020-11-20 15:32:41 +01:00
734d494d96
stdexp: Allow extra mounts
2020-11-20 15:30:47 +01:00
2863ab6ae1
machines: Use fs topology
2020-11-20 15:29:03 +01:00
4f0da10321
bigsort: Use cpusPerTask instead of cpuBind
2020-11-20 13:57:12 +01:00
David Alvarez
0c438d4dac
Setup for test experiment
2020-11-20 13:57:12 +01:00
David Alvarez
a0dac209e3
First test experiment
2020-11-20 13:57:12 +01:00
David Alvarez
37bd4c33f2
Add BigSort MPI+OpenMP
2020-11-20 13:57:12 +01:00
e8f649327a
exec: Avoid variable expansion at build
...
All bash variables passed in env, pre or post are now expanded at
execution time..
2020-11-20 13:54:45 +01:00
daadcc93d0
ompss2: fix to the last release
2020-11-19 18:50:30 +01:00
e65c801a20
paraver: Downgrade wx to 2.8 and add wxpropgrid
...
Fixes a problem with i3 when opening a new timeline view, which caused a
rapid switch between paraver main window and the timeline.
2020-11-19 16:36:47 +01:00
a076d7d3d0
Add paraver with some patches for tiling WM
2020-11-18 14:00:19 +01:00
d2d3ccf332
Idea for FS naming convention
2020-11-17 18:33:57 +01:00
e1e34ddf75
exec: add pre and post code to allow cleanup tasks
2020-11-17 16:09:38 +01:00
33f6ae7e55
Add bundled report example
2020-11-17 15:51:09 +01:00
fe0bd8b200
creams: fix pure experiment
...
Use machine agnostic specification for resources
2020-11-17 12:31:03 +01:00
bcb9cf31a3
Add datasets for creams experiments
2020-11-17 11:42:34 +01:00
dcb56643d5
nbody: add a small experiment
2020-11-17 11:36:42 +01:00
ef4bb13a7d
Add all experiments in one dummy target
2020-11-17 11:32:06 +01:00
69af473241
Disable old hpcg experiments
2020-11-17 11:31:34 +01:00
016422cede
Update nbody experiment
...
Generate the input based on the target machine description.
2020-11-17 11:26:35 +01:00
5e50ef19fe
Update experiments with cpusPerTask
...
Try to avoid manually setting the hardware specs and rather use
the hw attrset.
2020-11-17 11:17:57 +01:00
641e752bd5
Add a trace message at unit evaluation
2020-11-17 11:12:12 +01:00
74537e682c
Use divisors in the slurm cpu experiment
2020-11-17 11:01:34 +01:00
433c8864ea
Add divisor generator
2020-11-17 11:01:34 +01:00
e0ca33569b
garlic tools: rename divList -> halfList
2020-11-17 11:01:34 +01:00
65918bca21
dummy: Set the programPath for experiments
2020-11-17 11:01:34 +01:00
dea523460a
Add slurm affinity experiment
2020-11-17 11:01:34 +01:00
b4a3bb0ede
New stdexp resource specification
...
Now the options cpusPerTask ntasksPerNode nodes and jobName are required
for the sbatch stage. Also cpuBind has been removed and is always set to
"cores,verbose" in the srun stage.
2020-11-17 11:01:34 +01:00
dabc6be640
Add more helper functions
2020-11-17 11:01:34 +01:00
2a42c1e53e
Fix aliases
2020-11-17 10:57:17 +01:00
18afcb1f44
Avoid nixpkgs reevaluation
...
The bsc attrset is now extensible: replacing a few bsc packages is very
fast. Also we allow the complete bscpkgs to be within other custom
overlays (not tested yet).
2020-11-17 10:49:45 +01:00
3372f94855
noise: cut long lines and move vim line to bottom
2020-11-13 10:38:33 +01:00
288318b556
Merge branch 'saiph' into 'master'
...
Saiph
See merge request rarias/bscpkgs!6
2020-11-13 10:25:47 +01:00
42f2227a9f
sbatch: Use experiment reservation if given
2020-11-13 10:17:54 +01:00
Sandra
4ae66adb9a
Saiph: adding granularity experiment and figures
2020-11-13 09:56:40 +01:00
Sandra
86d1d426ec
Saiph: Removing devMode parameter
2020-11-12 19:10:43 +01:00
5333058741
report: build only required figures
...
Introduces a intermediate derivation that can be imported into the
report derivation, which contains a string cmd that expands the fig
variable as needed.
2020-11-11 19:03:02 +01:00
9a7e59a076
nanos6: fix the git commit
...
Until nanos6 release is complete, we don't want frequent large rebuilds
2020-11-11 19:00:33 +01:00
0b0f6ac9f0
rplot: Add a reference to the dataset
2020-11-11 18:59:57 +01:00
74ce07b193
rdma-core: use upstream by default
...
The systemd dependency is pulled anyway
2020-11-11 17:31:41 +01:00
f2610361a7
icc: fix hash and internal version number
2020-11-11 17:06:36 +01:00
acc3390b6b
WIP: icc update
2020-11-11 17:06:36 +01:00
9faa4ef101
rdma-core: only remove binaries
2020-11-11 17:06:03 +01:00
cd3afe4ad6
rdma-core: drop systemd dependency
2020-11-11 14:45:02 +01:00
4111535a9d
clangOmpss2: Remove clang from the inputs
...
Is already provided in stdenv as we use llvm10, and otherwise it
will pull clang 7 as dependency.
2020-11-11 13:17:31 +01:00
09361fae77
extrae: use pname to get the version
2020-11-11 13:17:03 +01:00
dc3e84a148
tampi: use the last release by default
2020-11-11 12:25:21 +01:00
1838178761
tampi: Update to 1.0.2 and use fetchFromGitHub
...
The configure flags are no longer required.
2020-11-11 12:24:41 +01:00
63f966e3c1
extrae: Add patch to follow upstream
2020-11-11 12:19:07 +01:00
966606b62d
hpcg: precompute the input
2020-11-09 17:48:46 +01:00
5763b91d39
Use the trebuchet only to specify an experiment
2020-11-09 17:46:11 +01:00
47f67dcd85
Extend abstract
2020-11-09 12:16:56 +01:00
48869d6e4a
Clarify some sections
2020-11-09 12:09:54 +01:00
92f58651b8
Increase margins and enable utf8 targets
2020-11-09 12:09:22 +01:00
c0669d7dc8
Update Intel MPI: 2019.8.254 -> 2019.9.304
2020-11-06 15:45:00 +01:00
31f7d17a41
Add manual diagram for nroff
2020-11-06 14:26:11 +01:00
538d595d30
Add MN4 ssh key section
2020-11-06 14:23:55 +01:00
dec183b221
Fix execution out path
2020-11-06 12:31:39 +01:00
92eee2ede8
Use target machine notation
2020-11-06 12:31:31 +01:00
a8208480c1
Add a nix shell for playing with plots
2020-11-05 20:01:26 +01:00
dd0823876a
hpcg: add plot for oss experiment
2020-11-05 19:59:47 +01:00
9d878eeb4a
saiph: add dataset for numcomm
2020-11-05 19:58:01 +01:00
11ac02da08
heat: Add test experiment and plot
2020-11-05 19:56:26 +01:00
074a75facb
saiph: name the experiment and units in numcomm
2020-11-05 19:53:38 +01:00
7a80d1ca98
heat: Use clang by default
2020-11-05 19:52:37 +01:00
9e477a2313
hpcg: smaller input size
2020-11-05 19:46:34 +01:00
5bd042ef67
nbody: mark the points with bad std
2020-11-05 19:43:39 +01:00
d7be13f88d
Update garlic options in store stage
2020-11-05 19:38:45 +01:00
476c2f20f0
Add manual and update the garlic tool
2020-11-05 19:31:21 +01:00
de6b4864ee
Add garlic tool manual
2020-11-05 19:29:40 +01:00
33682ef48d
Document the results and pp stages
2020-11-05 14:52:57 +01:00
634d2040b5
Add reference index
2020-11-04 13:00:42 +01:00
df4d908f1c
Add more rendered files to ignore
2020-11-04 12:57:22 +01:00
f0122d557f
WIP: postprocessing doc
2020-11-04 12:56:35 +01:00
62c9da2474
Add hpcg oss experiment dataset
2020-11-03 19:10:00 +01:00
0c58bb63b5
hpcg: add exp and unit name
2020-11-03 19:10:00 +01:00
de46366985
nbody: plot nb/cpu rather than nb
2020-11-03 19:10:00 +01:00
376ab9b32a
nbody: Remove test and use baseline
2020-11-03 19:10:00 +01:00
5eea48c5b0
Add exp and unit name to nbody tampi experiment
2020-11-03 19:10:00 +01:00
f1f75c1c11
Rearrange experiment datasets
2020-11-03 19:10:00 +01:00
c3988dacd2
WIP: documentation for the pp pipeline
2020-11-03 19:10:00 +01:00
e778ad75b3
Reorder garlic sets
2020-11-03 19:10:00 +01:00
317409f6ac
Move index and out inside the user directory
2020-11-03 19:10:00 +01:00
3eae92bdc4
Remove old pp stages
2020-11-03 19:10:00 +01:00
8bc0dc202d
New fetching mechanism with garlic tool
2020-11-03 19:10:00 +01:00
6b40e6f9e9
Experimental garlic tool
2020-11-03 19:10:00 +01:00
d5d42b3c09
Add unit and exp name to nbody test
2020-11-03 19:10:00 +01:00
0bcfe5d25b
Add new store pp stage
2020-11-03 19:10:00 +01:00
5e2797bcde
Create index files for the experiments
2020-11-03 19:10:00 +01:00
efd7df068e
Print full experiment path
2020-11-03 19:10:00 +01:00
7c5345f4bc
report: Idea to reduce build time
2020-11-03 19:10:00 +01:00
43991e9173
nbody: plot nblocks in test
2020-11-03 19:10:00 +01:00
7b26b59988
Use rsync to fetch only the logs
2020-11-03 19:10:00 +01:00
a66cdb52fb
nbody: Fix test experiment
2020-11-03 19:10:00 +01:00
3bd4e61f3f
WIP: Testing with automatic fetching
2020-11-03 19:09:59 +01:00
59346fa97e
control: Add status file
2020-11-03 19:09:59 +01:00
fd1229ddc0
nbody: add simple test figure
2020-11-03 19:09:59 +01:00
8ce88ef046
Add dataset attrset in garlic
...
Modify nbody to evenly distribute blocks per cpu
2020-11-03 19:09:59 +01:00
06c29b573f
Add exp.nbody.tampi variants
2020-11-03 19:09:59 +01:00
7852d86a3f
Fix plot details
2020-11-03 19:09:59 +01:00
4beb069627
WIP: postprocessing pipeline
...
Now each run is executed in a independent folder
2020-11-03 19:09:59 +01:00
1321b6a888
Add experiments with jemalloc and CPU affinity
2020-11-03 19:09:59 +01:00
ed8a6416a0
Add support for nanos6 with jemalloc
2020-11-03 19:09:59 +01:00
81d144d716
Remove exp attrset from report
...
Fixes #43
2020-11-03 19:09:59 +01:00
30ad4219d9
Add example report
2020-11-03 19:09:59 +01:00
067fb0c0a2
Add R shell for quick plots
2020-11-03 19:09:59 +01:00
308673f7f6
Increase nbody test cases
2020-11-03 19:09:59 +01:00
1bd9cb6c0f
Move the plot script to R
2020-11-03 19:09:59 +01:00
ede25b6736
Use the stage names as inputs
2020-11-03 19:09:59 +01:00
2680dcb66f
Don't nest the unit results
...
The experiment directory now contains symlinks to the units, keeping the
old structure. The unit results are directly placed in the garlic out
directory.
2020-11-03 19:09:58 +01:00
be0506bc21
Remove unused test for exec stage
2020-11-03 19:09:58 +01:00
f33137a55e
WIP: Add experimental figure pipeline
2020-11-03 19:09:58 +01:00
65745e0aaf
WIP: Add another nbody experiment
2020-11-03 19:09:58 +01:00
c3659d316d
Add perf stage
2020-11-03 19:09:58 +01:00
4f901c1b9c
WIP: add postprocessing stages
2020-11-03 19:09:58 +01:00
74f83b5c11
WIP: manual plot
2020-11-03 19:09:58 +01:00
11601703ce
Fix shebang in nanos6 master
...
Also perl is a new dependency now
2020-11-03 19:08:19 +01:00
6f60e3cab2
Fix groff PDF engine
...
Fixes issue #51
2020-11-03 11:16:58 +01:00
72ba080db1
Merge branch 'nbody' into 'master'
...
NBody Experiments
See merge request rarias/bscpkgs!5
2020-10-30 16:25:27 +01:00
dad70761ad
Merge branch 'hpcg' into 'master'
...
Hpcg
See merge request rarias/bscpkgs!4
2020-10-30 16:24:24 +01:00
Raúl Peñacoba
9c20537f91
Since mpi+omp version uses 6 threads, change nblocks values
2020-10-30 15:11:23 +01:00
Raúl Peñacoba
56584c9e97
Remove the osu set of tests
2020-10-30 15:01:50 +01:00
Raúl Peñacoba
6a1375726f
Fix problem sizes to be equivalent between versions
2020-10-30 14:44:33 +01:00
Raúl Peñacoba
d757332448
Remove extrae home
2020-10-30 14:35:09 +01:00
Raúl Peñacoba
58e3d48a16
Use mask_cpu and n.x n.y n.z instead of n
2020-10-30 14:08:56 +01:00
Raúl Peñacoba
b856e2147a
Use discrete deps in nanos6. Pass nblocks to omp version and use the same experiments as oss
2020-10-30 14:08:56 +01:00
Raúl Peñacoba
22a294f9cc
Forgot to set one task per node
2020-10-30 14:08:55 +01:00
Raúl Peñacoba
ea0272c212
Add OmpSs-2 (no mpi) version
2020-10-30 14:08:55 +01:00
Raúl Peñacoba
e20061254b
WIP: Add mpi, omp and mpi+omp experiments. See more.
...
Seems that gcc compilation with OpenMP throws an error. Investigate.
I think I've forgot to add an override of mpicxx compiler backend
2020-10-30 14:08:55 +01:00
01b2584688
Update hpcg experiments
2020-10-30 14:08:55 +01:00
Raúl Peñacoba
7bf3e81233
WIP: trying to make mpi branch working
2020-10-30 14:08:55 +01:00
Raúl Peñacoba
6bd7e12cff
WIP: forgot to add the folder
2020-10-30 14:08:55 +01:00
Raúl Peñacoba
b5fb3730ac
WIP: first serial experiment. Don't know how to add gcc to compile
2020-10-30 14:08:55 +01:00
Raúl Peñacoba
a44042615a
WIP
2020-10-30 14:08:55 +01:00
Antoni Navarro
05ce36e158
Add the MPI-weak scaling experiment and strong scaling experiments
2020-10-29 16:31:21 +01:00
Antoni Navarro
6ccc159487
Fix one of the CPU Masks in the weak scaling experiment
2020-10-29 16:30:55 +01:00
Antoni Navarro
8b985de65d
Add a few scalability experiments for some variants
2020-10-28 15:35:09 +01:00
ae6a3f9206
Enable python bindings in babeltrace 1
2020-10-16 19:31:43 +02:00
327a155907
Add babeltrace2 for nanos6
2020-10-16 18:18:31 +02:00
80ccd1240a
Less verbose execution
2020-10-14 16:29:22 +02:00
9d8f7d9074
Print the experiment being run
2020-10-14 16:28:27 +02:00
c7d2e2d866
Write the unit config in a file
2020-10-14 16:27:47 +02:00
148c614540
Add MN4 hw description
2020-10-14 16:24:56 +02:00
478535b4d1
Define CC and CXX for gcc
2020-10-13 17:43:23 +02:00
7a37913b4e
Set the ssh host from the machine config
2020-10-13 14:30:03 +02:00
05b37aa11d
Remove cluster scripts from nixtools
2020-10-13 14:17:23 +02:00
04328d81ff
Add runexp stage documentation
2020-10-13 14:07:34 +02:00
a38ff31cca
Introduce the runexp stage
2020-10-13 13:00:59 +02:00
d0a259f15d
Ignore generated doc
2020-10-13 12:17:14 +02:00
f2b39decba
Update execution doc with isolation
2020-10-13 12:16:48 +02:00
251103ffd3
Fix tbl preprocessor option
2020-10-13 12:16:46 +02:00
6ab448b10a
Fix trebuchet description
2020-10-09 20:28:00 +02:00
aa1ffa5208
Remove unused experiments
2020-10-09 20:17:35 +02:00
4de20d3aa5
Remove old stages and update some
2020-10-09 20:12:52 +02:00
27bc977590
Remove strace from isolate stage
2020-10-09 19:50:28 +02:00
1b703bd431
Fix saiph numcomm experiment
2020-10-09 19:40:49 +02:00
298c7362b3
New config design
2020-10-09 19:33:06 +02:00
9020f87765
Simplify saiph numcomm experiment
2020-10-09 17:20:50 +02:00
53dca32469
Simplify experiment
2020-10-09 17:19:00 +02:00
9d2ce2a1c2
Remove old experiments
2020-10-09 16:43:00 +02:00
e6e42dcec9
Remove old apps
2020-10-09 16:42:06 +02:00
332b738889
Move apps into garlic/apps
2020-10-09 16:42:06 +02:00
a576be8031
WIP stage redesign
2020-10-09 16:42:06 +02:00
654e243735
Include an index in the trebuchet
2020-10-09 16:42:06 +02:00
45afe7d391
Simplify experiment stage
2020-10-09 16:42:06 +02:00
d599b8c52f
New naming convention
2020-10-09 16:42:06 +02:00
697d4e652e
Ignore pdf and generated txt
2020-10-09 16:42:06 +02:00
26ea326ded
Group stages
2020-10-09 16:42:06 +02:00
66a5e06ada
Generate trebuchet from nix
2020-10-09 16:42:06 +02:00
e8d884a627
Document the execution pipeline
2020-10-09 16:42:06 +02:00
81004b5ee6
control: Fix bashism
2020-10-09 16:42:06 +02:00
4ea0d16926
WIP isolation
2020-10-09 16:42:06 +02:00
ba221c5200
Add rw test
2020-10-09 16:42:06 +02:00
effcc2d20b
Working isolated environment
2020-10-09 16:42:06 +02:00
2a01ee7f24
WIP isolate execution
2020-10-09 16:42:06 +02:00
896ebd4ace
WIP nix-isolate
2020-10-09 16:42:06 +02:00
0a26c72440
extrae: Remove dangerous home
2020-10-08 18:34:20 +02:00
4ce514de9b
Merge branch 'saiph' into 'master'
...
Saiph
See merge request rarias/bscpkgs!3
2020-10-07 14:56:33 +02:00
Sandra
c36fc8a08b
NOISE verbose fixes
2020-10-07 14:53:06 +02:00
Sandra
ec555e59e7
Setting a developer mode and its implication
2020-10-07 11:53:47 +02:00
Sandra
8f65030161
Saiph: numcomm experiment changes
2020-10-07 11:38:57 +02:00
Sandra
30630a74be
Saiph: Vectorisation compiler info flags
2020-10-07 11:38:02 +02:00
6d413c946c
nbody: Remove libtampi-c patch
...
See #37
2020-10-05 12:39:34 +02:00
533d8e9768
Fix tampi experiment to use multiple CPUs per task
2020-10-05 10:47:16 +02:00
d4ea0fe607
tampi: remove hacks from configure flags
...
The verbose make flag is added to ensure the log contains the complete
compilation line.
2020-10-05 10:45:11 +02:00
2f56488197
Merge branch 'master' of bscpm02.bsc.es:rarias/bscpkgs
2020-10-05 10:31:15 +02:00
3dd609f7db
Switch to TAMPI from gitlab as default
2020-10-05 10:31:09 +02:00
368aa57cb7
nbody: Remove OpenMPI dirty hack
...
Was fixed in 7e1a5128b6
2020-10-05 10:28:38 +02:00
18081b3485
Merge branch 'creams' into 'master'
...
Creams
See merge request rarias/bscpkgs!2
2020-10-02 18:40:45 +02:00
Pedro Martinez
231672a222
Rename files to improve consistency
2020-10-02 18:28:13 +02:00
Pedro Martinez
b403fbefe1
Add hybrid strong scalability experiments
2020-10-02 17:48:00 +02:00
Pedro Martinez
c85b2976ef
Fix non-hybrid strong scalability experiments
2020-10-02 16:47:45 +02:00
Pedro Martinez
6ae71cc5e9
Improvement the experiment based on CREAMS
2020-10-02 16:40:43 +02:00
Pedro Martinez
5cbc8e4fbb
First attempt to create an experiment with CREAMS: strong scaling from 1 to 16 nodes using the pure MPI version
2020-10-02 16:40:43 +02:00
50eeca2257
hist: Add -S option and allow joined plots
2020-10-02 15:30:55 +02:00
61a2db03dc
Add postprocessing hist tool
2020-10-02 11:58:04 +02:00
fd47044bfb
Merge branch 'saiph' into 'master'
...
Saiph changes
- nix-shell changes
- useless exports avoided
See merge request rarias/bscpkgs!1
2020-10-02 10:52:12 +02:00
Sandra
79a4a4d16b
saiph: removing home paths
2020-10-02 10:46:56 +02:00
Sandra
cec7a280c0
saiph: removing nix-shell to avoid its use!!
2020-10-01 17:52:50 +02:00
Sandra
dcf64bd1f6
adding NOISE point
2020-10-01 17:52:50 +02:00
Sandra
ce7566cf7a
saiph: removing useless exports
2020-10-01 17:52:50 +02:00
Sandra
78b96c1bc6
saiph: including reservation option
2020-10-01 17:52:50 +02:00
Sandra
6a2d865225
saiph: adding ministat app to saiph shell
2020-10-01 17:52:50 +02:00
Sandra
8f5c5146b3
Saiph: update branchname according to garlic nomenclature
2020-10-01 17:52:50 +02:00
Sandra
e3349bb864
saiph: exp: adding extrae config files
2020-10-01 17:52:50 +02:00
Sandra
ef592c060f
Saiph: saiph shell
2020-10-01 17:52:50 +02:00
d210e96d18
Mark the launcher for upload
2020-10-01 10:48:54 +02:00
35f4ba545a
Experimental GDB stage
2020-09-30 16:00:34 +02:00
a227084e39
tampi: add gitlab repo in tampiGit
2020-09-30 09:35:23 +02:00
ec21ba98b5
nbody: Allow custom reservation
2020-09-30 09:32:25 +02:00
69b1dcf08a
nbody: forgot nixsetup attr
2020-09-30 09:24:14 +02:00
eb46e8f41b
tampi: Disable the C++ MPI interface for OpenMPI
...
Fixes #30
2020-09-29 16:55:14 +02:00
fa734deaca
extrae: remove home path from the xml
2020-09-28 14:11:14 +02:00
f72a4e9bc8
Enable symbolizer for asan
2020-09-28 13:07:07 +02:00
ae2cdf8790
numcomm: disable extrae
2020-09-28 13:06:35 +02:00
dadc02ca99
Update libpsm2: disabled by now
2020-09-28 13:01:31 +02:00
ff4d39233a
Add valgrind stage
2020-09-28 13:00:59 +02:00
985091130d
clang: use the commit hash as version
2020-09-28 12:56:13 +02:00
724b8f232a
Intel MPI: release_mt -> release
...
Fixes issue #28
2020-09-28 12:21:41 +02:00
sandra
c1b64e8897
saiph: if extrae add some env var
2020-09-23 13:13:51 +02:00
sandra
c8915dfc89
saiph: cc is a experiment parameter
2020-09-23 13:10:12 +02:00
sandra
3419db1fc6
saiph: nixsetup to re-enter nix after the new added stage
2020-09-23 13:06:16 +02:00
sandra
32ac89b97f
Saiph: cc is a parameter of the app, not defined at stdenv anymore
...
[its default value is clangOmpss2]
2020-09-23 12:58:51 +02:00
79fae204c2
Typo
2020-09-22 18:39:29 +02:00
ed7f6e3e97
nbody: Clean environment
2020-09-22 18:39:11 +02:00
1d5b528cd0
Change output log files
2020-09-22 18:38:37 +02:00
e3623b05fd
Print the env via stderr
2020-09-22 18:38:25 +02:00
ebd947c544
Set default mpi implementation to Intel MPI
2020-09-22 18:02:32 +02:00
e044ce918e
Add OpenMP noise section
2020-09-22 18:01:42 +02:00
7de0593e4b
nanos6: Use git commit hash as version only
2020-09-22 17:42:36 +02:00
58e6c76349
Move apps to garlic
2020-09-22 17:41:40 +02:00
c5e225c778
saiph:Remove old experiments
2020-09-22 17:40:26 +02:00
edf429c932
Avoid loading .bashrc
2020-09-22 17:39:26 +02:00
cd37d513e8
saiph: Extrae with the correct MPI
2020-09-22 14:26:01 +02:00
ad4df5e05d
saiph: Up to 4 numcomm experiment
2020-09-21 19:54:12 +02:00
5920c964d2
saiph: fix hardening and affinity
2020-09-21 19:23:17 +02:00
cc101ad1d3
Add saiph experiments
2020-09-21 17:30:24 +02:00
126f05e92c
Simplify paths
2020-09-21 14:34:08 +02:00
dba1cc22bc
New design with overlays
2020-09-16 12:22:55 +02:00
847b5b3e0a
Add noise experiment with nbody
2020-09-03 16:19:52 +02:00
c4dc42c2a4
Add acctg-freq to sbatch stage
2020-09-03 16:19:19 +02:00
be95827927
Add loops param to control stage
2020-09-03 16:18:50 +02:00
bdc221ba81
Add perf for linux 4.9
2020-09-02 17:07:34 +02:00
8110bc2976
New stage design
2020-09-02 17:07:09 +02:00
d469ccd59d
Add extrae and perf stages
2020-09-02 10:44:13 +02:00
d05d32edbf
Fix repo path and bashrc
2020-08-31 17:56:58 +02:00
68c8691916
Update title
2020-08-31 17:34:37 +02:00
4fa8d8f683
Remove duplicated section
2020-08-31 17:33:37 +02:00
8613253395
Add MN4 section and rename
2020-08-31 17:29:32 +02:00
0cc5fe92e5
Add documentation on sources of variability
2020-08-28 20:01:58 +02:00
196b681586
mpich: add enableDebug option
2020-08-26 19:21:14 +02:00
87809ef903
Update extrae and enable man pages
2020-08-26 19:20:17 +02:00
09c2b9005a
Testing nbody blocksize with impi
...
Weird run times with srun: Two exceed 20%. Relative times:
0.998649 0.998936 0.999409 1.00018 1.00191
0.998684 0.998936 0.999432 1.00041 1.00222
0.998776 0.999065 0.999527 1.00126 1.0024
0.998786 0.999084 0.999558 1.00138 1.00242
0.998856 0.999102 0.999727 1.00155 1.25585
0.998895 0.9992 0.999849 1.0018 1.27138
2020-08-25 18:39:31 +02:00
cfa5187988
nbody: use intel cc and mpi by default
2020-08-25 18:38:31 +02:00
27fbecf970
nbody: Use garlic git URL
2020-08-25 18:37:50 +02:00
839489d20f
Remove nix-setup verbose info
2020-08-25 18:36:33 +02:00
d1e152a917
Exit on error in control script
2020-08-25 18:35:58 +02:00
f44f5b4338
Merge branch 'master' of bscpm02.bsc.es:rarias/bsc-nixpkgs
2020-08-25 15:16:51 +02:00
fa1f06ce31
Use nix copy to upload to mn4, fixes #15
2020-08-25 15:16:19 +02:00
cff653d164
Simplify dummy
2020-08-25 14:52:18 +02:00
67ac951289
Merge branch 'master' of bscpm02.bsc.es:rarias/bsc-nixpkgs into master
2020-08-25 13:00:10 +02:00
5b1a296640
Add build debug section
2020-08-25 12:59:44 +02:00
76b0a239e3
sbatch: Add reservation flag
2020-08-24 18:07:09 +02:00
1473874563
Use relative path in sbatch
2020-08-24 18:06:47 +02:00
4b27ceec6d
Add clsync tool
2020-08-21 19:49:23 +02:00
5314f343b6
Add static nix with shell set to /bin/sh
2020-08-19 18:16:00 +02:00
14684040a5
Intra/inter node latency tests
2020-08-19 11:07:21 +02:00
c70d35cd50
Add MPICH with libfabric enabled
2020-08-19 11:06:23 +02:00
1e07be863a
Add OSU test benchmarks
2020-08-18 18:28:30 +02:00
ecc01e4314
Add old SLURM, pmix and pmi2 versions
2020-08-17 18:55:01 +02:00
23fa7d8654
Update and fix Intel MPI, fixes #9
2020-08-17 18:51:51 +02:00
01295487d8
Add srun wrapper and use pmi2
2020-08-17 18:50:18 +02:00
df18435dfc
Provide argvWrapper
2020-08-12 14:00:04 +02:00
338736d257
Add control and nix-setup layers
2020-08-11 12:05:43 +02:00
ef1aeb2cfa
Run each experiment in a unique directory
2020-08-10 18:25:53 +02:00
8db4ef2594
Tidy nbody experiment
2020-08-10 16:06:42 +02:00
b777fbc6d5
Merge branch 'master' of bscpm02.bsc.es:rarias/bsc-nixpkgs
2020-08-10 14:15:07 +02:00
b9e9409a59
Success sbatch launch in MN4 with nbody seq
2020-08-10 14:13:28 +02:00
f4cbd654e2
slurm17: Add pmix library
2020-08-05 17:44:03 +02:00
9631f4c223
Add slurm 17.11.9-2, builds ok.
2020-08-05 10:57:05 +02:00
bab4c696d8
First successful execution with SLURM
2020-08-04 18:38:33 +02:00
39a639ac10
Testing SLURM jobs with ppong
2020-08-04 11:51:09 +02:00
85c15e9f3f
Testing sbatch job
2020-07-31 18:47:33 +02:00
c7c8d858f4
Test runner script WIP
2020-07-29 18:38:39 +02:00
7c92f713cd
Add ParaStation MPI implementation
2020-07-29 18:38:27 +02:00
5df174f24e
Print the app being run
2020-07-29 18:36:35 +02:00
272511f058
Use local build for experiments
2020-07-27 19:14:29 +02:00
f1e891b6bf
Show loop optimization problems
2020-07-27 19:13:21 +02:00
f6137a7bc0
Allow multiple space-separated flags
2020-07-27 19:13:11 +02:00
b93851ba93
Testing experiments with nbody
2020-07-27 17:55:56 +02:00
b042e783e5
Add CC and CXX names to compilers passthru
2020-07-27 17:55:35 +02:00
ea81c34f31
Merge branch 'master' of bscpm02.bsc.es:rarias/bsc-nixpkgs
2020-07-27 15:24:26 +02:00
97d69d25ee
Fix Intel URLs
...
Fixes #5
2020-07-27 15:23:42 +02:00
0eec726335
Merge branch 'master' of bscpm02.bsc.es:rarias/bsc-nixpkgs
2020-07-27 13:18:18 +02:00
76ec5d5f16
Add dummy app
2020-07-27 13:17:52 +02:00
11901e77de
Rename gauss-seidel to heat
2020-07-27 13:17:08 +02:00
979888eede
Add generators for experiments
2020-07-27 11:14:33 +02:00
bbc851db78
Add config generation
2020-07-24 18:34:18 +02:00
9cba2d609c
Working proof of concept for garlic experiments
2020-07-24 15:30:28 +02:00
bad6f3c761
Add garlic group
2020-07-24 13:24:30 +02:00
ac1523d946
Merge branch 'master' of bscpm02.bsc.es:rarias/bsc-nixpkgs
2020-07-24 11:33:44 +02:00
cf72d526ee
Add mpptest
2020-07-24 11:33:05 +02:00
419418781f
Revert "icc: use fetchTarball"
...
This reverts commit 215b104174e7bdcf9dfe6727683261eea54d036f.
2020-07-23 19:10:37 +02:00
f842b22330
Merge branch 'master' of bscpm02.bsc.es:rarias/bsc-nixpkgs
2020-07-23 19:00:09 +02:00
215b104174
icc: use fetchTarball
2020-07-23 19:00:03 +02:00
0a09affbc4
impi: use fetchTarball
2020-07-23 18:47:20 +02:00
1e54fbdc43
Fix libcxx include path
2020-07-21 16:31:31 +02:00
10b061aa96
icc: Fix updated url
2020-07-21 09:33:41 +02:00
ab0aa74590
Add garlic group with all apps
2020-07-20 17:31:17 +02:00
f07d87e97e
impi: fix sed path and add link to intel64
2020-07-20 17:06:14 +02:00
ca0c1445ba
Add custom mcxx version
2020-07-20 16:08:15 +02:00
b8d15e7d84
Ignore source folder
2020-07-20 16:07:26 +02:00
f20ef93c56
impi: allow echo as compiler for mpitool
2020-07-20 16:06:00 +02:00
ba13d37694
Remove custom nanos6
2020-07-20 16:05:32 +02:00
528cd7d205
hpcg: Missing TAMPI patch
2020-07-20 15:58:06 +02:00
60fdba40ae
fwi: Use 4_MPI_ompss variant.
...
The -D_GNU_SOURCE define is required before mcc includes nanos6.h
2020-07-20 15:32:00 +02:00
c50158e3be
Add fwi app
2020-07-20 12:58:54 +02:00
81bcf20419
hpccg: Copy binaries to output
2020-07-20 12:39:39 +02:00
321bfa290c
Set serial compiler to Intel
2020-07-20 12:06:22 +02:00
3b23b230ed
Add hpccg app
2020-07-20 12:04:15 +02:00
11b1652617
Unify package versions
2020-07-20 11:59:58 +02:00
d634538223
Use upstream nanos6 from git and disable hardening
...
The bindnow hardening option is incompatible with the ifunc symbol
resolution mechanism. All hardening is disabled as well.
2020-07-15 12:21:48 +02:00
cd409677b0
Add hpcg app
2020-07-13 16:46:44 +02:00
0b2f9df3ea
lulesh: Use nanos6 from git
2020-07-13 16:45:36 +02:00
3298c5442c
Add lulesh app
2020-07-13 14:09:20 +02:00
99b716db87
icc: Propagate gcc as is required to build
2020-07-13 14:07:24 +02:00
a78f0caec9
intel: Enable ifort compiler
2020-07-10 17:04:21 +02:00
dc12cbe045
creams: Cleaning unused dependencies
2020-07-10 17:02:33 +02:00
577a7c3190
Add CREAMS app
2020-07-10 16:49:39 +02:00
7c68efe743
mcxx: remove build dependency with icc
2020-07-10 16:42:33 +02:00
261d304961
Add ifort to intel compilers
2020-07-10 13:42:55 +02:00
0daa0b9c35
Remove patch phase for gauss seidel app
2020-07-10 13:19:48 +02:00
114a6b081f
Add icc in mcxx to enable imc* wrappers
2020-07-10 13:17:45 +02:00
fdc8b68d9a
Disable libstdcxxHook
2020-07-08 15:00:39 +02:00
5df94bfc66
Use current gcc version with mcxx
2020-07-08 14:59:19 +02:00
Kevin Sala
7b2c88be78
Adding Gauss-Seidel benchmark.
...
It does not work yet due to a gcc compilation issue.
2020-07-08 13:35:46 +02:00
Rodrigo
6f06022aa5
Typo in git repo
2020-07-08 12:16:59 +02:00
599e504f1a
Remove libgomp and libiomp from clang
2020-07-06 15:58:09 +02:00
c03ac6d05a
Remove unused clang nix file
2020-07-06 15:32:55 +02:00
a95f7fa35e
Add details for xeon07
2020-07-06 11:19:20 +02:00
018bebc264
Disable debug in clang+ompss2 compiler
2020-07-06 11:15:55 +02:00
ee5964a984
Disable assertions in clang
2020-07-03 18:34:57 +02:00
0f2b4754fd
Add a dummy bin for the examples
2020-07-03 18:26:04 +02:00
91c38d70a8
Add README
2020-07-03 18:25:22 +02:00
0663895b3f
Ignore vim swap files
2020-07-03 15:14:08 +02:00
bdfcb65b7e
Delete .swp file
2020-07-03 15:12:57 +02:00
7d8f86eaad
saiph: sanitize address and compile for avx2
2020-07-03 11:13:41 +02:00
1e02ac9023
Enable compiler-rt for asan and update clang-ompss2
2020-07-02 21:10:44 +02:00
e0c5a3ebca
Prefer makeFlags and use local directory
2020-07-02 15:54:41 +02:00
940c494d8e
Use last intel compiler 2020 version
2020-07-02 15:32:52 +02:00
sandra
8032825765
Merge branch 'master' of bscpm02.bsc.es:rarias/bsc-nixpkgs
2020-07-02 14:47:28 +02:00
sandra
2189436619
Saiph compilation details
2020-07-02 14:47:10 +02:00
61f055e258
Remove nix debug from nbody
2020-07-02 12:59:37 +02:00
9662ff4138
Test nbody with icc
2020-07-02 12:36:38 +02:00
1f36743459
Add intel compiler
2020-07-02 12:36:22 +02:00
9ca29d5cf8
Use autoPatchelfHook for Intel MPI
2020-07-01 17:57:31 +02:00
9d65f2ae2c
Add icc bin to out dir
2020-07-01 13:08:05 +02:00
Rodrigo
61c799e7e4
Intel compiler stub
2020-07-01 10:25:33 +02:00
33a46f41ce
Add support for mcc and clang in Intel mpicc
2020-06-30 15:41:18 +02:00
a1f33444b5
Testing saiph app
2020-06-30 12:19:36 +02:00
74222706bf
Add Intel MPI
2020-06-29 20:46:30 +02:00
5064170b31
Add mcxx to nbody: now builds
2020-06-29 17:40:25 +02:00
3ddd1721f4
Use gcc9 to compile mcxx
2020-06-29 17:39:12 +02:00
71430b3552
Add mercurium mcxx compiler
2020-06-29 17:32:30 +02:00
19c18627be
Update nanos6 to last release (not working)
2020-06-29 16:53:57 +02:00
d6093681cc
Move cpic to apps directory
2020-06-29 16:53:37 +02:00
08a3512bf1
Add nbody package (not working yet)
2020-06-29 16:42:25 +02:00
9a5759c45e
Update nanos6-git version
2020-06-29 16:41:17 +02:00
Rodrigo Arias
a4d20edd8b
Update nanos6 git
2020-06-29 14:44:17 +02:00
Rodrigo Arias
bd9788961b
Use autoreconfHook for TAMPI
2020-06-26 10:16:41 +02:00
Rodrigo Arias
67c692b648
Add test subset
2020-06-25 21:02:49 +02:00
Rodrigo Arias
a83627890e
Place packages together
2020-06-25 20:43:35 +02:00
Rodrigo Arias
53aebe5846
Use new format for urls
2020-06-25 20:05:12 +02:00
Rodrigo Arias
6b5e5aafa9
Add patched nix for BeeGFS
2020-06-25 15:13:20 +02:00
Rodrigo Arias
6dc2f8045d
Update nanos6
2020-06-17 17:10:41 +02:00
Rodrigo Arias
040f205538
Use cpic from git
2020-06-17 16:39:04 +02:00
Rodrigo Arias
210e705653
Quiet cpic compilation
2020-06-17 16:31:05 +02:00
Rodrigo Arias
f5484cf5c3
Clean unused derivations
2020-06-17 13:26:14 +02:00
Rodrigo Arias
57f09c1967
Ignore result build folder
2020-06-17 13:23:59 +02:00
Rodrigo Arias
86b4b016b2
Remove unused helpers
2020-06-17 13:23:29 +02:00
Rodrigo Arias
ed829aace0
Clean cpic dependencies
2020-06-17 13:22:06 +02:00
Rodrigo Arias
d9ec42614c
Fix libstdc++.so path
2020-06-17 13:21:44 +02:00
Rodrigo Arias
19e4e12126
Working stdenv with clang+ompss2
2020-06-17 13:00:49 +02:00
Rodrigo Arias
a8523c4b4e
Add sandbox build test
2020-06-16 15:39:11 +02:00
Rodrigo Arias
63c78f50de
Fix OpenMPI and Extrae clash
2020-06-15 17:19:36 +02:00
Rodrigo Arias
cae91fdcc0
Dont strip cpic symbols
2020-06-15 12:58:27 +02:00
Rodrigo Arias
fbbdf0740a
Fix TAMPI derivation
2020-06-15 12:45:16 +02:00
Rodrigo Arias
98b51cfa6d
Update nanos6-git from upstream
2020-06-15 12:04:05 +02:00
Rodrigo Arias
5cec4b02de
Merge branch 'master' of https://github.com/rodarima/bsc-nixpkgs
2020-06-15 12:03:19 +02:00
Rodrigo Arias
ebea6f1e81
Use nanos6 from git for cpic
2020-06-15 12:03:11 +02:00
rodarima
2feaafb104
Delete .git.nix.swp
2020-06-15 11:56:44 +02:00
Rodrigo Arias
3c2b7c163f
cpic: Compilation ok but fails to run
2020-06-15 11:54:22 +02:00
Rodrigo Arias
a331ec5f14
Add mode packages and cpic app
2020-06-11 19:04:16 +02:00
Rodrigo
ceaf273219
Proper install phase for llvm-ompss2
2020-06-11 11:33:29 +02:00
Rodrigo
3805eb0ceb
Experimental llvm derivation
2020-06-10 19:35:11 +02:00
Rodrigo
37b49e1dd3
Add nanos6 git version
2020-06-10 18:55:30 +02:00
Rodrigo
b600bb77d4
Compile extrae with clang
2020-06-10 14:28:10 +02:00
Rodrigo
20e3f4d4f0
Add compilers
2020-06-09 18:21:02 +02:00
Rodrigo
5a4068b497
Enable extrae mpi implementation input
2020-06-08 18:31:23 +02:00
Rodrigo
83770803e5
Initial test packages
2020-06-08 18:01:33 +02:00