442 Commits

Author SHA1 Message Date
91fa59e397 Enable nosv system feature 2025-10-02 15:57:13 +02:00
f3bfe89f27 Fetch website from its own git repository
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-02 15:45:21 +02:00
ee6f981006 Add script to trim the repository
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-02 15:44:56 +02:00
b040bebd1d Add acinca user
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-01 12:27:43 +02:00
f69629d2da Restart slurmd on failure
A failure to reach the control node can cause slurmd to fail and the
unit remains in the failed state until is manually restarted. Instead,
try to restart the service every 30 seconds, forever:

    owl1% systemctl show slurmd | grep -E 'Restart=|RestartUSec='
    Restart=on-failure
    RestartUSec=30s
    owl1% pgrep slurmd
    5903
    owl1% sudo kill -SEGV 5903
    owl1% pgrep slurmd
    6137

Fixes: #177
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-30 17:20:39 +02:00
0668f0db74 Lower connect timeout when using hut substituter
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-09-29 18:44:48 +02:00
5fcd57a061 Use hut substituter in all nodes
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-09-29 18:44:38 +02:00
ad1544759f Remove machine access for user csiringo
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-09-29 18:23:24 +02:00
e1c950a530 Mount apex /home via NFS in raccoon
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-26 12:28:53 +02:00
f9632c37f8 Remove extra SSH jump configuration
We now have direct visibility among nodes so we don't need any extra
SSH configuration to reach them.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-26 12:28:51 +02:00
1f0cb4ae76 Add raccoon peer to wireguard
It routes traffic from fox, apex and the compute nodes so that we can
reach the git servers and tent.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-26 12:28:48 +02:00
d49d078bed Add raccoon host key
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-26 12:28:46 +02:00
e98fdb89ab Restrict fox peer to a single IP
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-26 12:28:43 +02:00
6afe05b5fd Use lowercase peer hostnames
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-26 12:28:25 +02:00
7d5aebf882 Share a public folder for documents
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:59:40 +02:00
94cbfd38a6 Fix AMDuProfPcm so it finds libnuma.so
We change the search procedure so it detects NixOS from /etc/os-release
and uses "libnuma.so" when calling dlopen, instead of harcoding a full
path to /usr. The full patch of libnuma is stored in the runpath, so
dlopen can find it.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
Tested-by: Vincent Arcila <vincent.arcila@bsc.es>
2025-09-19 10:54:36 +02:00
4da7780472 Add amd_hsmp module in fox for AMD uProf
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:54:24 +02:00
a6dfc267fd Fix hidden dependencies for AMDuProfSys
It tries to dlopen libcrypt.so.1 and libstdc++.so.6, so we make sure
they are available by adding them to the runpath.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:54:19 +02:00
d6126501ba Disable NMI watchdog in fox
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:54:17 +02:00
ac0deb47b6 Fix amd-uprof dependencies with patchelf
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:54:15 +02:00
f7d676de77 Fix hrtimer new interface
The hrtimer_init() is now done via hrtimer_setup() with the callback
function as argument.

See: https://lwn.net/Articles/996598/
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:54:09 +02:00
cf1db201b2 Use CFLAGS_MODULE instead of EXTRA_CFLAGS
Fixes the build in Linux 6.15.6, as it was not able to find the include
files.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:54:07 +02:00
e6e4846529 Add AMD uProf module and enable it in fox
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:54:05 +02:00
084d556c56 Add AMD uProf package and driver
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-09-19 10:53:49 +02:00
ff0fc18d0a Mount home via NFS from apex in fox
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 15:34:02 +02:00
19c7e32678 Allow access to NFS via wireguard subnet
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 15:33:47 +02:00
017c19e7d0 Use 10.106.0.0/24 subnet to avoid collisions
The 106 byte is the code for 'j' (jungle) in ASCII:

	% printf j | od -t d
	0000000         106
	0000001

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:03:13 +02:00
a36eff8749 Revert "Remove pam_slurm_adopt from fox"
This reverts commit 1eac0fcad8.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:03:06 +02:00
df17b11458 Enable fail2ban in fox
Protect fox against ssh bruteforce attacks:

fox% sudo lastb | head
root     ssh:notty    200.124.28.102   Mon Sep  1 11:25 - 11:25  (00:00)
root     ssh:notty    200.124.28.102   Mon Sep  1 11:25 - 11:25  (00:00)
root     ssh:notty    200.124.28.102   Mon Sep  1 11:25 - 11:25  (00:00)
root     ssh:notty    200.124.28.102   Mon Sep  1 11:25 - 11:25  (00:00)
root     ssh:notty    200.124.28.102   Mon Sep  1 11:25 - 11:25  (00:00)
root     ssh:notty    200.124.28.102   Mon Sep  1 11:25 - 11:25  (00:00)
root     ssh:notty    200.124.28.102   Mon Sep  1 11:25 - 11:25  (00:00)
root     ssh:notty    200.124.28.102   Mon Sep  1 11:25 - 11:25  (00:00)
root     ssh:notty    200.124.28.102   Mon Sep  1 11:24 - 11:24  (00:00)
root     ssh:notty    200.124.28.102   Mon Sep  1 11:24 - 11:24  (00:00)

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:03:02 +02:00
0dc7b7eb3d Accept connections from apex to fox slurmd
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:03:00 +02:00
dff6eaf587 Accept fox connection to slurm controller
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:02:59 +02:00
4b6b67b587 Add fox machine to SLURM
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:02:57 +02:00
20e7d244d1 Rekey secrets with trusted fox key
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:02:55 +02:00
c5d3b8e7f0 Trust fox for compute node secrets
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:02:52 +02:00
6bbfb0d124 Make apex host specific to each machine
Allows direct contact via the VPN when accessing from fox, but use
Internet when using the rest of the machines.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:02:49 +02:00
46d03d5ca7 Add local host fox in apex
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:02:46 +02:00
e366e6ce87 Enable wireguard in apex
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:02:43 +02:00
e415f70bbb Add wireguard server in fox
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-09-03 12:02:38 +02:00
200c727bbf Use writeShellScript for suspend.sh and resume.sh
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-08-29 12:35:28 +02:00
7413021440 Add firewall rules to slurm server
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-08-29 12:35:26 +02:00
20b4805335 Remove hut from slurm
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-08-29 12:35:24 +02:00
f7dff9deab Only configure apex as slurm server
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-08-29 12:35:22 +02:00
f569933732 Split slurm configuration for client and server
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-08-29 12:35:20 +02:00
ee895d2e4f Move slurm control server to apex
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-08-29 12:35:16 +02:00
5ee8623af2 Fix typo in csiringo ssh key
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-08-27 17:44:20 +02:00
a0e4b209b0 Enable nix-ld in weasel
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-08-27 16:19:34 +02:00
ce25867421 Add csiringo user with access to apex and weasel
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-08-27 16:02:26 +02:00
f89bba35a6 Access gitlab via raccoon in fox
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-08-27 15:27:38 +02:00
d591721a61 Move StartLimit* options to unit section
The StartLimitBurst and StartLimitIntervalSec options belong to the
[Unit] section, otherwise they are ignored in [Service]:

> Unknown key 'StartLimitIntervalSec' in section [Service], ignoring.

When using [Unit], the limits are properly set:

  apex% systemctl show power-policy.service | grep StartLimit
  StartLimitIntervalUSec=10min
  StartLimitBurst=10
  StartLimitAction=none

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-24 14:32:46 +02:00
343b4f155e Set power policy to always turn on
In all machines, as soon as we recover the power, turn the machine back
on. We cannot rely on the previous state as we will shut them down
before the power is cut to prevent damage on the power supply
monitoring circuit.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-24 11:22:38 +02:00
39a211a846 Add NixOS module to control power policy
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-24 11:22:36 +02:00
142985c505 Move August shutdown to 3rd at 22h
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-24 11:22:33 +02:00
3f3dc2d037 Disable automatic August shutdown for Fox
The UPC has different dates for the yearly power cut, and Fox can
recover properly from a power loss, so we don't need to have it turned
off before the power cut. Simply disabling the timer is enough.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-24 11:22:10 +02:00
3269d763aa Add cudainfo program to test CUDA
The cudainfo program checks that we can initialize the CUDA RT library
and communicate with the driver. It can be used as standalone program or
built with cudainfo.gpuCheck so it is executed inside the build sandbox
to see if it also works fine. It uses the autoAddDriverRunpath hook to
inject in the runpath the location of the library directory for CUDA
libraries.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-23 11:52:09 +02:00
f2d8ee8552 Add missing symlink in cuda sandbox
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-23 11:51:47 +02:00
8d984a0672 Enable cuda systemFeature in raccoon and fox
This allows running derivations which depend on cuda runtime without
breaking the sandbox. We only need to add `requiredSystemFeatures = [ "cuda" ];`
to the derivation.

Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-07-22 17:07:13 +02:00
f3733418b2 Move shared nvidia settings to a separate module
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-07-22 17:06:45 +02:00
ce8b05b142 Replace xeon07 by hut in ssh config
The xeon07 machine has been renamed to hut.

Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-07-21 18:10:08 +02:00
4a5787e0c6 Enable automatic Nix GC in raccoon
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-21 17:58:26 +02:00
6c11093033 Select proprietary NVIDIA driver in raccoon
The NVIDIA GTX 960 from 2016 has the Maxwell architecture, and NixOS
suggests using the proprietary driver for older than Turing:

> It is suggested to use the open source kernel modules on Turing or
> later GPUs (RTX series, GTX 16xx), and the closed source modules
> otherwise.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-21 17:58:21 +02:00
750504744f Enable open source NVidia driver in fox
It is recommended for newer versions.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-18 09:57:38 +02:00
c26ec1b6f1 Remove option allowUnfree from fox and raccoon
It is already set to true for all machines.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-18 09:57:21 +02:00
2ef32f773c Ban another scanner trying to connect via SSH
It is constantly spamming out logs:

apex# journalctl | grep 'Connection closed by 84.88.52.176' | wc -l
2255

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-18 09:51:49 +02:00
fc9fcd602a Update weasel IPMI hostname for monitoring
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-18 09:51:21 +02:00
0e37ab5fe1 Remove merged MPICH patch
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-07-16 13:07:12 +02:00
a1b387e454 Remove package ix as it is gone
Fails with: "error: ix has been removed from Nixpkgs, as the ix.io
pastebin has been offline since Dec. 2023".

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-07-16 13:07:06 +02:00
380abe9957 flake.lock: Update
Flake lock file updates:

• Updated input 'agenix':
    'github:ryantm/agenix/f6291c5935fdc4e0bef208cfc0dcab7e3f7a1c41?narHash=sha256-b%2Buqzj%2BWa6xgMS9aNbX4I%2BsXeb5biPDi39VgvSFqFvU%3D' (2024-08-10)
  → 'github:ryantm/agenix/531beac616433bac6f9e2a19feb8e99a22a66baf?narHash=sha256-9P1FziAwl5%2B3edkfFcr5HeGtQUtrSdk/MksX39GieoA%3D' (2025-06-17)
• Updated input 'agenix/darwin':
    'github:lnl7/nix-darwin/4b9b83d5a92e8c1fbfd8eb27eda375908c11ec4d?narHash=sha256-gzGLZSiOhf155FW7262kdHo2YDeugp3VuIFb4/GGng0%3D' (2023-11-24)
  → 'github:lnl7/nix-darwin/43975d782b418ebf4969e9ccba82466728c2851b?narHash=sha256-dyN%2BteG9G82G%2Bm%2BPX/aSAagkC%2BvUv0SgUw3XkPhQodQ%3D' (2025-04-12)
• Updated input 'agenix/home-manager':
    'github:nix-community/home-manager/3bfaacf46133c037bb356193bd2f1765d9dc82c1?narHash=sha256-7ulcXOk63TIT2lVDSExj7XzFx09LpdSAPtvgtM7yQPE%3D' (2023-12-20)
  → 'github:nix-community/home-manager/abfad3d2958c9e6300a883bd443512c55dfeb1be?narHash=sha256-YZCh2o9Ua1n9uCvrvi5pRxtuVNml8X2a03qIFfRKpFs%3D' (2025-04-24)
• Updated input 'bscpkgs':
    'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=6782fc6c5b5a29e84a7f2c2d1064f4bcb1288c0f' (2024-11-29)
  → 'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=9d1944c658929b6f98b3f3803fead4d1b91c4405' (2025-06-11)
• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/9c6b49aeac36e2ed73a8c472f1546f6d9cf1addc?narHash=sha256-i/UJ5I7HoqmFMwZEH6vAvBxOrjjOJNU739lnZnhUln8%3D' (2025-01-14)
  → 'github:NixOS/nixpkgs/dfcd5b901dbab46c9c6e80b265648481aafb01f8?narHash=sha256-Kt1UIPi7kZqkSc5HVj6UY5YLHHEzPBkgpNUByuyxtlw%3D' (2025-07-13)

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-07-16 13:07:01 +02:00
37c12783bb Upgrade nixpkgs to nixos 25.05
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-07-16 13:06:40 +02:00
7379e84e79 Silently ban OpenVAS BSC scanner from apex
It is spamming our logs with refused connection lines:

apex% sudo journalctl -b0 | grep 'refused connection.*SRC=192.168.8.16' | wc -l
13945

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 17:40:41 +02:00
b802f88df9 Rotate anavarro password and SSH key
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 17:24:41 +02:00
bd94c4ad00 Add weasel machine configuration
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 17:24:38 +02:00
570c6e175d Remove extra flush commands on firewall stop
They are not needed as they are already flushed when the firewall
starts or stops.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:45 +02:00
96661dd0d4 Prevent accidental use of nftables
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:42 +02:00
28db7799ea Add proxy configuration for internal hosts
Access internal hosts via apex proxy. From the compute nodes we first
open an SSH connection to apex, and then tunnel it through the HTTP
proxy with netcat.

This way we allow reaching internal GitLab repositories without
requiring the user to have credentials in the remote host, while we can
use multiple remotes to provide redundancy.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:36 +02:00
508059c99e Remove unused blackbox configuration modules
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:30 +02:00
b9f9cc7d7a Use IPv4 in blackbox probes
Otherwise they simply fail as IPv6 doesn't work.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:26 +02:00
eae0c7cb59 Make NFS mount async to improve latency
Don't wait to flush writes, as we don't care about consistency on a
crash:

> This option allows the NFS server to violate the NFS protocol and
> reply to requests before any changes made by that request have been
> committed to stable storage (e.g. disc drive).
>
> Using this option usually improves performance, but at the cost that
> an unclean server restart (i.e. a crash) can cause data to be lost or
> corrupted.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:20 +02:00
2280635cd6 Disable root_squash from NFS
Allows root to read files in the NFS export, so we can directly run
`nixos-rebuild switch` from /home.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:16 +02:00
16ada09600 Remove SSH proxy to access BSC clusters
We now have direct connection to them.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:13 +02:00
0d291d715c Add users to apex machine
They need to be able to login to apex to access any other machine from
the SSF rack.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:09 +02:00
66001f76f7 Remove proxy from hut HTTP probes
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:04 +02:00
1e3b85067d Remove proxy configuration from environment
All machines have now direct connection with the outside world.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:18:00 +02:00
36ee1f3adc Add storcli utility to apex
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:17:57 +02:00
25e9c071b0 Add new configuration for apex
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-15 11:17:43 +02:00
80cee2dbd0 Add pmartin1 user with access to fox
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-03 11:16:43 +02:00
ee92934c74 Add access to fox for rpenacob user
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 16:58:53 +02:00
db0f3fed91 Revert "Only allow Vincent to access fox for now"
This reverts commit e9e3704b67.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 16:58:49 +02:00
adeaa0484d Add all terminfo files in environment
Fixes problems with the kitty terminal when opening vim or kakoune.

Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-07-02 16:02:45 +02:00
815810830e Monitor Fox BMC with ICMP probes too
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:51:22 +02:00
7a52e1907c Restrict DAC VPN to fox-ipmi machine only
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:51:19 +02:00
22a2e1b9e8 Monitor fox via VPN
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:51:16 +02:00
f29461ae32 Add OpenVPN service to connect to fox BMC
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:51:13 +02:00
208197f099 Add ac.upc.edu as name search server
Allows referring to fox.ac.upc.edu directly as fox.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:51:09 +02:00
479ca1b671 Disable kptr_restrict in fox
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:08:42 +02:00
40529fbdcb Disable NUMA balancing in fox
See: https://www.kernel.org/doc/html/latest/admin-guide/sysctl/kernel.html#numa-balancing

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:08:02 +02:00
9b0d3fb21e Load amd_uncore module in fox
Needed for L3 events in perf.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:07:58 +02:00
d8444131d8 Enable SSH X11 forwarding
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-07-02 15:07:54 +02:00
af540456a6 Disable registration in Gitea
Get rid of all the spam accounts they are trying to register.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:18 +02:00
42d6734da8 Enable msmtp configuration in tent
Allows gitea to send notifications via email.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:15 +02:00
071a8084a0 Add GitLab runner with debian docker for PM
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:13 +02:00
24a0c58592 Monitor nix-daemon in tent
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:11 +02:00
810a6dfcec Move nix-daemon exporter to modules
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:09 +02:00
47ad89dee1 Add p service for pastes
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:07 +02:00
8af1b259f5 Enable public-inbox service in tent
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:06 +02:00
560003d4fd Enable gitea in tent
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:04 +02:00
68ff45075c Add bsc.es to resolve domain names
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:02 +02:00
fc68d16197 Monitor AXLE machine too
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:36:00 +02:00
f6ec1293f4 Use IPv4 for blackbox exporter
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:59 +02:00
4feeff978c Add public html files to tent
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:57 +02:00
7b19292912 Add docker GitLab runner for BSC GitLab
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:55 +02:00
0627db0eb9 Add GitLab shell runner in tent for PM
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:54 +02:00
ae2f6dde41 Enable jungle robot emails for Grafana in tent
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:52 +02:00
3bf70656dc Add tent key for nix-serve
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:50 +02:00
1cf989d727 Remove jungle nix cache from tent
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:48 +02:00
19f734e622 Enable nix cache
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:47 +02:00
d6e3d9626c Serve Grafana from subpath
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:45 +02:00
9c32e42dcc Add nginx server in tent
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:43 +02:00
61e6d3232b Add monitoring in tent
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-18 15:35:00 +02:00
d0fd8cde46 Disable nix garbage collector in tent
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-06-11 16:05:05 +02:00
5223ea53f6 Rekey secrets with tent keys
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:04:20 +02:00
253426ce00 Add tent host key and admin keys
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:04:16 +02:00
df67b6cd26 Create directories in /vault/home for tent users
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:04:12 +02:00
766da21097 Add software RAID in tent using 3 disks
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:04:10 +02:00
18461c0d59 Add access to tent to all hut users too
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:04:06 +02:00
028b151c78 Add hut SSH configuration from outside SSF LAN
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:04:04 +02:00
7176b066bb Don't use proxy in base preset
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:04:00 +02:00
c3c3614f63 Add tent machine from xeon04
We moved the tent machine to the server room in the BSC building and is
now directly connected to the raccoon via NAT.

Fixes: #106
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:03:54 +02:00
e13288fc29 Create specific SSF rack configuration
Allow xeon machines to optionally inherit SSF configuration such as the
NFS mount point and the network configuration.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 16:03:49 +02:00
e9e3704b67 Only allow Vincent to access fox for now
Needed to run benchmarks without interference.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 12:08:57 +02:00
7d3c7342ae Use performance governor in fox
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 12:08:55 +02:00
8f80ed2cce Add hut as nix cache in fox
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 12:08:51 +02:00
d00f996f59 Use extra- for substituters and trusted-public-keys
From the nix manual:

> A configuration setting usually overrides any previous value. However,
> for settings that take a list of items, you can prefix the name of the
> setting by extra- to append to the previous value.

Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-06-11 11:27:37 +02:00
e40fd24f26 Use DHCP for Ethernet in fox
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 10:24:53 +02:00
83efd6c876 Use UPC time servers as others are blocked
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-11 10:24:47 +02:00
f0c4206ab8 Create tracing group and add arocanon in raccoon
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 11:09:41 +02:00
8b43a6ffb6 Extend perf support in raccoon
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 11:09:30 +02:00
2bca10b0e4 Enable nixdebuginfod in raccoon
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:50:01 +02:00
eec3e27d66 Make raccoon use performance governor
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:45:35 +02:00
e51ef52721 Enable binfmt emulation in raccoon
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:45:33 +02:00
9dc67d402f Disable nix garbage collector in raccoon
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:45:31 +02:00
62ec4e014a Add dbautist user to raccoon machine
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:45:28 +02:00
4d03842f7c Add node exporter monitoring in raccoon
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:45:26 +02:00
8fedc5518e Allow X11 forwarding via SSH
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:45:23 +02:00
43dc336638 Enable linger for user rarias
Allows services to run without a login session.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:45:19 +02:00
2b08fcd21a Only proxy SSH git remotes via hut in xeon
Other machines like raccoon have direct access.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-06-03 10:44:31 +02:00
557618d43f Add machine map file
Documents the location, board and serial numbers so we can track the
machines if they move around. Some information is unkown.

Using the Nix language to encode the machines location and properties
allows us to later use that information in the configuration of the
machines themselves.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 14:55:58 +02:00
e8ac6cf0f3 Remove fox monitoring via IPMI
We will need to setup an VPN to be able to access fox in its new
location, so for now we simply remove the IPMI monitoring.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:53 +02:00
f8fc391cae Monitor fox, gateway and UPC anella via ICMP
Fox should reply once the machine is connected to the UPC network.
Monitoring also the gateway and UPC anella allows us to estimate if the
whole network is down or just fox.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:51 +02:00
6c1afa3fd8 Update configuration for UPC network
The fox machine will be placed in the UPC network, so we update the
configuration with the new IP and gateway. We won't be able to reach hut
directly so we also remove the host entry and proxy.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:48 +02:00
008584b465 Disable home via NFS in fox
It won't be accesible anymore as we won't be in the same LAN.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:46 +02:00
a22c862192 Rekey all secrets
Fox is no longer able to use munge or ceph, so we remove the key and
rekey them.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:44 +02:00
cd0c070439 Rotate fox SSH host key
Prevent decrypting old secrets by reading the git history.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:42 +02:00
201ff64b25 Distrust fox SSH key
We no longer will share secrets with fox until we can regain our trust.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:38 +02:00
9bee145e25 Remove Ceph module from fox
It will no longer be accesible from the UPC.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:36 +02:00
4528b7c2a6 Remove fox from SLURM
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:20 +02:00
1eac0fcad8 Remove pam_slurm_adopt from fox
We no longer will be able to use SLURM from jungle.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-06-02 11:26:02 +02:00
dd15f9c943 Add UPC temperature sensor monitoring
These sensors are part of their air quality measurements, which just
happen to be very close to our server room.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-05-29 13:01:37 +02:00
4048b3327a Add meteocat exporter
Allows us to track ambient temperature changes and estimate the
temperature delta between the server room and exterior temperature.
We should be able to predict when we would need to stop the machines due
to excesive temperature as summer approaches.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-05-29 13:01:29 +02:00
f4229e34f6 Add custom nix-daemon exporter
Allows us to see which derivations are being built in realtime. It is a
bit of a hack, but it seems to work. We simply look at the environment
of the child processes of nix-daemon (usually bash) and then look for
the $name variable which should hold the current derivation being
built. Needs root to be able to read the environ file of the different
nix-daemon processes as they are owned by the nixbld* users.

See: https://discourse.nixos.org/t/query-ongoing-builds/23486
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-05-29 12:57:07 +02:00
5208a3483b Set keep-outputs to true in all machines
From the documentation of keep-outputs, setting it to true would prevent
the GC from removing build time dependencies:

If true, the garbage collector will keep the outputs of non-garbage
derivations. If false (default), outputs will be deleted unless they are
GC roots themselves (or reachable from other roots).

In general, outputs must be registered as roots separately. However,
even if the output of a derivation is registered as a root, the
collector will still delete store paths that are used only at build time
(e.g., the C compiler, or source tarballs downloaded from the network).
To prevent it from doing so, set this option to true.

See: https://nix.dev/manual/nix/2.24/command-ref/conf-file.html#conf-keep-outputs
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2025-04-22 17:27:37 +02:00
92eacfad20 Add raccoon node exporter monitoring
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-22 14:50:08 +02:00
80309d107b Increase data retention to 5 years
Now that we have more space, we can extend the retention time to 5 years
to hold the monitoring metrics. For a year we have:

	# du -sh /var/lib/prometheus2
	13G     /var/lib/prometheus2

So we can expect it to increase to about 65 GiB. In the future we may
want to reduce some adquisition frequency.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-22 14:50:03 +02:00
d0f151595f Don't forward any docker traffic
Access to the 23080 local port will be done by applying the INPUT rules,
which pass through nixos-fw.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-15 14:16:15 +02:00
93f8d3aa89 Allow traffic from docker to enter port 23080
Before:

  hut% sudo docker run -it --rm alpine /bin/ash -xc 'true | nc -w 3 -v 10.0.40.7 23080'
  + true
  + nc -w 3 -v 10.0.40.7 23080
  nc: 10.0.40.7 (10.0.40.7:23080): Operation timed out

After:

  hut% sudo docker run -it --rm alpine /bin/ash -xc 'true | nc -w 3 -v 10.0.40.7 23080'
  + true
  + nc -w 3 -v 10.0.40.7 23080
  10.0.40.7 (10.0.40.7:23080) open

Fixes: #94
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-15 14:16:10 +02:00
d84645f3e1 Add bscpm04.bsc.es SSH host and public key
Allows fetching repositories from hut and other machines in jungle
without the need to do any extra configuration.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-15 14:15:45 +02:00
55b71d6901 Use hut nix cache in owl1, owl2 and raccoon
For owl1 and owl2 directly connect to hut via LAN with HTTP, but for
raccoon pass via the proxy using jungle.bsc.es with HTTPS. There is no
risk of tampering as packages are signed.

Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-04-15 14:08:17 +02:00
89c65ea578 Clean all iptables rules on stop
Prevents the "iptables: Chain already exists." error by making sure that
we don't leave any chain on start. The ideal solution is to use
iptables-restore instead, which will do the right job. But this needs to
be changed in NixOS entirely.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-15 14:08:14 +02:00
129273e8d8 Make nginx listen on all interfaces
Needed for local hosts to contact the nix cache via HTTP directly.
We also allow the incoming traffic on port 80.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-15 14:08:07 +02:00
fdac196c6c Fix nginx /cache regex
`nix-serve` does not handle duplicates in the path:
```
hut$ curl http://127.0.0.1:5000/nix-cache-info
StoreDir: /nix/store
WantMassQuery: 1
Priority: 30
hut$ curl http://127.0.0.1:5000//nix-cache-info
File not found.
```

This meant that the cache was not accessible via:
`curl https://jungle.bsc.es/cache/nix-cache-info` but
`curl https://jungle.bsc.es/cachenix-cache-info` worked.

Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-04-15 14:08:04 +02:00
3f4b4fb810 Add new GitLab runner for gitlab.bsc.es
It uses docker based on alpine and the host nix store, so we can perform
builds but isolate them from the system.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:41:18 +02:00
2c7211ffa3 Remove SLURM partition all
We no longer have homogeneous nodes so it doesn't make much sense to
allocate a mix of them.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:27 +02:00
18f25307ab Add varcila user to hut and fox
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:25 +02:00
7c55d10ceb Adjust fox slurm config after disabling SMT
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:23 +02:00
5c549faaa8 Add abonerib user to fox
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:21 +02:00
9fd35a9ce4 Don't move doc in web output
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:19 +02:00
5487a93972 Reject SSH connections without SLURM allocation
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:15 +02:00
fe16ea373f Add users to fox
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:13 +02:00
163434af09 Add dalvare1 user
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:11 +02:00
71164400d4 Mount NVME disks in /nvme{0,1}
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:06 +02:00
f887dacdea Exclude fox from being suspended by slurm
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:04 +02:00
4f5c8dbbaf Use IPMI host names instead of IP addresses
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:15:01 +02:00
14b192b1d9 Add fox IPMI monitoring
Use agenix to store the credentials safely.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:14:59 +02:00
2b04812320 Add new fox machine
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-04-08 17:14:42 +02:00
2f6f6ba703 Update PM GitLab tokens to new URL
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 15:43:13 +01:00
371b0c7e76 Fix MPICH build by fetching upstream patches too
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 15:43:13 +01:00
ae34eacf4a flake.lock: Update
Flake lock file updates:

• Updated input 'agenix':
    'github:ryantm/agenix/de96bd907d5fbc3b14fc33ad37d1b9a3cb15edc6' (2024-07-09)
  → 'github:ryantm/agenix/f6291c5935fdc4e0bef208cfc0dcab7e3f7a1c41' (2024-08-10)
• Updated input 'bscpkgs':
    'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=de89197a4a7b162db7df9d41c9d07759d87c5709' (2024-04-24)
  → 'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=6782fc6c5b5a29e84a7f2c2d1064f4bcb1288c0f' (2024-11-29)
• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/693bc46d169f5af9c992095736e82c3488bf7dbb' (2024-07-14)
  → 'github:NixOS/nixpkgs/9c6b49aeac36e2ed73a8c472f1546f6d9cf1addc' (2025-01-14)

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 15:43:13 +01:00
dab6f08d89 Set nixpkgs to track nixos-24.11
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 15:43:13 +01:00
8190523c30 Add script to monitor GPFS
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 15:43:07 +01:00
d335d69ba6 Add BSC machines to ssh config
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:51 +01:00
cec49eb5fc Collect statistics from logged users
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:48 +01:00
22db38c98f Add custom GPFS exporter for MN5
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:46 +01:00
0d4eebbb59 Remove exception to fetch task endpoint
It causes the request to go to the website rather than the Gitea
service.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:43 +01:00
025f6a0c0c Use SSD for boot, then switch to NVME
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:40 +01:00
abc74c5445 Use NVME as root
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:37 +01:00
6942f09f69 Keep host header for Grafana requests
This was breaking requests due to CSRF check.

See: https://github.com/grafana/grafana/issues/45117#issuecomment-1033842787
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:32 +01:00
56f6855af7 Ignore logging requests from the gitea runner
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:28 +01:00
81c822e68e Log the client IP not the proxy
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:22 +01:00
53e80b1f19 Ignore misc directory
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:19 +01:00
21feb01e7b Create paste directories in /ceph/p
Ensure that all hut users have a paste directory in /ceph/p owned by
themselves. We need to wait for the ceph mount point to create them, so
we use a systemd service that waits for the remote-fs.target.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:16 +01:00
9ea7b2b475 Add p command to paste files
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:10 +01:00
fce4d89e1d Use nginx to serve website and other services
Instead of using multiple tunels to forward all our services to the VM
that serves jungle.bsc.es, just use nginx to redirect the traffic from
hut. This allows adding custom rules for paths that are not posible
otherwise.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:23:07 +01:00
6b282375f8 Mount the NVME disk in /nvme
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-01-16 14:22:58 +01:00
260986b9f2 Delay nix-gc until /home is mounted
Prevents starting the garbage collector before the remote FS are
mounted, in particular /home. Otherwise, all the gcroots which have
symlinks in /home will be considered stale and they will be removed.

See: #79
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-09-20 09:45:30 +02:00
15afbe94bd Add dbautist user with access to hut
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-09-20 09:42:02 +02:00
efd35a9cd1 Set the serial console to ttyS1 in raccoon
Apparently the ttyS0 console doesn't exist but ttyS1 does:

  raccoon% sudo stty -F /dev/ttyS0
  stty: /dev/ttyS0: Input/output error
  raccoon% sudo stty -F /dev/ttyS1
  speed 9600 baud; line = 0;
  -brkint -imaxbel

The dmesg line agrees:

  00:03: ttyS1 at I/O 0x2f8 (irq = 3, base_baud = 115200) is a 16550A

The console configuration is then moved from base to xeon to allow
changing it for the raccoon machine.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:56 +02:00
50ad1d637c Remove setLdLibraryPath and driSupport options
They have been removed from NixOS. The "hardware.opengl" group is now
renamed to "hardware.graphics".

See: 98cef4c273
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:53 +02:00
c299d53146 Add documentation section about GRUB chain loading
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:47 +02:00
152b71e718 Add 10 min shutdown jitter to avoid spikes
The shutdown timer will fire at slightly different times for the
different nodes, so we slowly decrease the power consumption.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:44 +02:00
0911d5b92a Don't mount the nix store in owl nodes
Initially we planned to run jobs in those nodes by sharing the same nix
store from hut. However, these nodes are now used to build packages
which are not available in hut. Users also ssh to the nodes, which
doesn't mount the hut store, so it doesn't make much sense to keep
mounting it.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:42 +02:00
5ddae068af Emulate other architectures in owl nodes too
Allows cross-compilation of packages for RISC-V that are known to try to
run RISC-V programs in the host.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:39 +02:00
d17be714ec Program shutdown for August 2nd for all machines
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:36 +02:00
28ce15d74d Enable debuginfod daemon in owl nodes
WARNING: This will introduce noise, as the daemon wakes up from time to
time to check for new packages.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:30 +02:00
504f9bb570 Set gitea and grafana log level to warn
Prevents filling the journal logs with information messages.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:27 +02:00
f158cb63e8 Set default SLURM job time limit to one hour
Prevents enless jobs from being left forever, while allow users to
request a larger time limit.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:24 +02:00
8860f76cad Allow other jobs to run in unused cores
The current select mechanism was using the memory too as a consumable
resource, which by default only sets 1 MiB per node. As each job already
requests 1 MiB, it prevents other jobs from running.

As we are not really concerned with memory usage, we only use the unused
cores in the select criteria.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:22 +02:00
b86798cd69 Use authentication tokens for PM GitLab runner
Starting with GitLab 16, there is a new mechanism to authenticate the
runners via authentication tokens, so use it instead.  Older tokens and
runners are also removed, as they are no longer used.

With the new way of managing tokens, both the tags and the locked state
are managed from the GitLab web page.

See: https://docs.gitlab.com/ee/ci/runners/new_creation_workflow.html
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:16 +02:00
7ed74931cf flake.lock: Update
Flake lock file updates:

• Updated input 'agenix':
    'github:ryantm/agenix/1381a759b205dff7a6818733118d02253340fd5e' (2024-04-02)
  → 'github:ryantm/agenix/de96bd907d5fbc3b14fc33ad37d1b9a3cb15edc6' (2024-07-09)
• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/6143fc5eeb9c4f00163267708e26191d1e918932' (2024-04-21)
  → 'github:NixOS/nixpkgs/693bc46d169f5af9c992095736e82c3488bf7dbb' (2024-07-14)

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:13 +02:00
6e9d33b483 Allow ptrace to any process of the same user
Allows users to attach GDB to their own processes, without requiring
running the program with GDB from the start. It is only available in
compute nodes, the storage nodes continue with the restricted settings.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:09 +02:00
58abaefbc4 Add abonerib user to hut, raccon, owl1 and owl2
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:07 +02:00
5ea7827a8a Grant rpenacob access to owl1 and owl2 nodes
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:05 +02:00
b17e4a13f9 Access private repositories via hut SSH proxy
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:36:03 +02:00
9c4e60c2c2 Set the default proxy to point to hut
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:35:56 +02:00
e7376917bd Allow incoming traffic to hut proxy
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2024-09-12 08:35:23 +02:00
130e191d37 eudy: koro: fcs: Fix fcs unprotected cpuid all
smp_processor_id() was called in a preepmtible context, which could
invalidate the returned value. However, this was not harmful, because
fcs threads in nosv are pinned.

Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-07-17 11:40:20 +02:00
349f69e30a Add support for armv7 emulation in hut
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-07-17 11:12:48 +02:00
59ab6405c5 Monitor raccoon machine via IPMI
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-07-17 11:12:32 +02:00
a0dab66aa5 Move vlopez user to jungleUsers for koro host
Access to other machines can be easily added into the "hosts" attribute
without the need to replicate the configuration.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-07-16 12:35:39 +02:00
525cad4117 Add raccoon motd file
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-07-16 12:35:38 +02:00
24ee74d614 Split xeon specific configuration from base
To accomodate the raccoon knights workstation, some of the configuration
pulled by m/common/main.nix has to be removed. To solve it, the xeon
specific parts are placed into m/common/xeon.nix and only the common
configuration is at m/common/base.nix.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-07-16 12:35:37 +02:00
15b4b28d2c Control user access to each machine
The users.jungleUsers configuration option behaves like the users.users
option, but defines the list attribute `hosts` for each user, which
filters users so that only the user can only access those hosts.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-07-16 12:35:34 +02:00
b1ce302e4b Add PostgreSQL DB for performance test results
The database will hold the performance results of the execution of the
benchmarks. We follow the same setup on knights3 for now.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-07-16 12:35:24 +02:00
b8b85f55cd Enable Grafana email alerts
Allows sending Grafana alerts via email too, so we have a reduntant
mechanism in case Slack fails to deliver them.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-05-31 15:57:38 +02:00
1189626a6f Enable mail notification in Gitea
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-05-31 10:56:49 +02:00
dbd95dd7b8 Add msmtp to send notifications via email
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-05-31 10:56:20 +02:00
81b680a7d2 Allow Ceph traffic to lake2 2024-05-02 17:43:48 +02:00
ba60e121df Collect Gitea metrics in Prometheus
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-05-02 17:32:25 +02:00
432e6c8521 Add Gitea service
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-05-02 17:31:51 +02:00
c8160122b3 Add firewall rules for Ceph and monitoring
The firewall was blocking the monitoring traffic from hut and the Ceph
traffic among OSDs. The rules only allow connecting from the specific
host that they are supposed to be coming from.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-04-25 13:25:11 +02:00
3863fc25a5 Add workaround for MPICH 4.2.0
See: https://github.com/pmodels/mpich/issues/6946

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-04-25 13:25:08 +02:00
2b26cd2f46 Fix SLURM bug in rank integer sign expansion
See: https://bugs.schedmd.com/show_bug.cgi?id=19324

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-04-25 13:25:05 +02:00
30f2079f0b Merge pmix outputs for MPICH
MPICH expects headers and libraries to be present in the same directory.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-04-25 13:25:03 +02:00
366436b6d3 Remove nixseparatedebuginfod input
It has been integrated in nixpkgs, so is no longer required.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-04-25 13:24:58 +02:00
9f1cd02144 flake.lock: Update
Flake lock file updates:

• Updated input 'agenix':
    'github:ryantm/agenix/daf42cb35b2dc614d1551e37f96406e4c4a2d3e4' (2023-10-08)
  → 'github:ryantm/agenix/1381a759b205dff7a6818733118d02253340fd5e' (2024-04-02)
• Updated input 'agenix/darwin':
    'github:lnl7/nix-darwin/87b9d090ad39b25b2400029c64825fc2a8868943' (2023-01-09)
  → 'github:lnl7/nix-darwin/4b9b83d5a92e8c1fbfd8eb27eda375908c11ec4d' (2023-11-24)
• Updated input 'agenix/home-manager':
    'github:nix-community/home-manager/32d3e39c491e2f91152c84f8ad8b003420eab0a1' (2023-04-22)
  → 'github:nix-community/home-manager/3bfaacf46133c037bb356193bd2f1765d9dc82c1' (2023-12-20)
• Added input 'agenix/systems':
    'github:nix-systems/default/da67096a3b9bf56a91d16901293e51ba5b49a27e' (2023-04-09)
• Updated input 'bscpkgs':
    'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=e148de50d68b3eeafc3389b331cf042075971c4b' (2023-11-22)
  → 'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=de89197a4a7b162db7df9d41c9d07759d87c5709' (2024-04-24)
• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/e4ad989506ec7d71f7302cc3067abd82730a4beb' (2023-11-19)
  → 'github:NixOS/nixpkgs/6143fc5eeb9c4f00163267708e26191d1e918932' (2024-04-21)
• Updated input 'nixseparatedebuginfod':
    'github:symphorien/nixseparatedebuginfod/232591f5274501b76dbcd83076a57760237fcd64' (2023-11-05)
  → 'github:symphorien/nixseparatedebuginfod/98d79461660f595637fa710d59a654f242b4c3f7' (2024-03-07)
• Removed input 'nixseparatedebuginfod'
• Removed input 'nixseparatedebuginfod/flake-utils'
• Removed input 'nixseparatedebuginfod/flake-utils/systems'
• Removed input 'nixseparatedebuginfod/nixpkgs'

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-04-25 13:24:29 +02:00
82ccae1315 Use google.com probe instead of bsc.es
The main website of the BSC is failing every day around 3:00 AM for
almost one hour, so it is not a very good target. Instead, google.com is
used which should be more reliable. The same robots.txt path is fetched,
as it is smaller than the main page.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-03-05 16:52:21 +01:00
1df80460d2 Add another HTTPS probe for bsc.es
As all other HTTPS probes pass through the opsproxy01.bsc.es proxy, we
cannot detect a problem in our proxy or in the BSC one. Adding another
target like bsc.es that doesn't use the ops proxy allows us to discern
where the problem lies.

Instead of monitoring https://www.bsc.es/ directly, which will trigger
the whole Drupal server and take a whole second, we just fetch robots.txt
so the overhead on the server is minimal (and returns in less than 10 ms).

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2024-02-13 12:26:56 +01:00
7f17fe8874 Move slurm client in a separate module
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2024-02-13 11:11:17 +01:00
5880a6e5f6 Enable public-inbox at jungle.bsc.es/lists
The public-inbox service fetches emails from the sourcehut mailing lists
and displays them on the web. The idea is to reduce the dependency on
external services and add a secondary storage for the mailing lists in
case sourcehut goes down or changes the current free plans.

The service is available in https://jungle.bsc.es/lists/ and is open to
the public. It currently mirrors the bscpkgs and jungle mailing list.

We also edited the CSS to improve the readability and have larger fonts
by default.

The service for public-inbox produced by NixOS is not well configured to
fetch emails from an IMAP mail server, so we also manually edit the
service file to enable the network.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-12-15 11:18:08 +01:00
ecbb45d6ac Monitor https://pm.bsc.es/gitlab/ too
The GitLab instance is in the /gitlab endpoint and may fail
independently of https://pm.bsc.es/.

Cc: Víctor López <victor.lopez@bsc.es>
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-12-05 09:56:28 +01:00
c564d945d4 Enable nixseparatedebuginfod module
The module is only enabled on Hut and Eudy because we noticed activity
on the debuginfod service even if no debug session was active.

Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2023-12-04 11:04:52 +01:00
ed887b0412 Use tmpfs in /tmp
The /tmp directory was using the SSD disk which is not erased across
boots. Nix will use /tmp to perform the builds, so we want it to be as
fast as possible. In general, all the machines have enough space to
handle large builds like LLVM.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-28 12:25:50 +01:00
fe1d3fbb80 Enable runners for pm.bsc.es/gitlab too
The old runners for the PM gitlab were disabled in configuration in the
last outage, but they remained working until we reboot the node. With
this change we enable the runners for both PM and gitlab.bsc.es.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-24 14:45:23 +01:00
5234ca32fd Remove complete ceph package from hut
Only the ceph-client is needed.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-24 12:58:54 +01:00
cfe0c0e6e6 Fix warning in slurm exporter using vendorHash
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-24 12:58:50 +01:00
7afe7344ac Remove old Ceph package overlay
The Ceph package is now integrated in upstream nixpkgs.

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-24 12:58:47 +01:00
bd83ca53ab flake.lock: Update
Flake lock file updates:

• Updated input 'agenix':
    'github:ryantm/agenix/d8c973fd228949736dedf61b7f8cc1ece3236792' (2023-07-24)
  → 'github:ryantm/agenix/daf42cb35b2dc614d1551e37f96406e4c4a2d3e4' (2023-10-08)
• Updated input 'bscpkgs':
    'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=f605f8e5e4a1f392589f1ea2b9ffe2074f72a538' (2023-10-31)
  → 'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=e148de50d68b3eeafc3389b331cf042075971c4b' (2023-11-22)
• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/e56990880811a451abd32515698c712788be5720' (2023-09-02)
  → 'github:NixOS/nixpkgs/e4ad989506ec7d71f7302cc3067abd82730a4beb' (2023-11-19)

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-24 12:57:44 +01:00
0d9c99a24e BSC packages are no longer in bsc attribute
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-09 13:40:48 +01:00
db98b1f698 flake.lock: Update
Flake lock file updates:

• Updated input 'bscpkgs':
    'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs/heads/master&rev=3a4062ac04be6263c64a481420d8e768c2521b80' (2023-09-14)
  → 'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=f605f8e5e4a1f392589f1ea2b9ffe2074f72a538' (2023-10-31)

Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-09 13:40:48 +01:00
84c4b6b81c Switch bscpkgs URL to sourcehut
Reviewed-by: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-11-09 13:40:48 +01:00
19e195b894 Monitor anella instead of gw.bsc.es
The target gw.bsc.es doesn't reply to our ICMP probes from hut. However,
the anella hop in the tracepath is a good candidate to identify cuts
between the login and the provider and between the provider and external
hosts like Google or Cloudflare DNS.

Reviewed-By: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-10-27 12:46:08 +02:00
54c2bd119f Add ICMP probes
These probes check if we can reach several targets via ICMP, which is
not proxied, so they can be used to see if ICMP forwarding is working in
the login node.

In particular, we test if we can reach the Google (8.8.8.8) and
Cloudflare (1.1.1.1) DNS servers, the BSC gateway which responds to ping
only from the intranet and the login node (ssfhead).

Reviewed-By: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-10-25 17:13:03 +02:00
e5d85c1b38 Enable proxy for Grafana too
The alerts need to contact the slack endpoint, so we add the proxy
environment variables to the grafana systemd service.

Reviewed-By: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-10-25 16:55:56 +02:00
f1486b84c1 Make blackbox exporter use the proxy
By default it was trying to reach the targets using the default gateway,
but since the electrical cut of 2023-10-20, the login node has not
enabled forwarding again. So better if we don't rely on it.

Reviewed-By: Aleix Roca Nonell <aleix.rocanonell@bsc.es>
2023-10-25 16:55:24 +02:00
472f4b0334 Don't log SLURM connection attempts from ssfhead 2023-10-06 15:22:04 +02:00
425dca3e00 Add docker runner too 2023-10-06 15:17:07 +02:00
e4080cf931 Monitor gitlab.bsc.es too 2023-10-06 15:17:07 +02:00
fc9285f89d Monitor PM webpage via blackbox 2023-10-06 15:17:07 +02:00
fbe238f5b6 Temporarily disable pm runners 2023-10-06 15:17:07 +02:00
9874da566d Add runner for gitlab.bsc.es 2023-10-06 15:17:07 +02:00
ebc5c4d84f Allow anonymous access to grafana 2023-09-22 10:51:30 +02:00
8634a9e133 Remove user/group when using DynamicUsers 2023-09-22 10:13:06 +02:00
0ce79ed79e Set the SLURM_CONF variable 2023-09-21 22:22:00 +02:00
5f492ee1d7 Enable slurm-exporter service 2023-09-21 21:40:02 +02:00
9071a4de8b Add prometheus-slurm-exporter package 2023-09-21 21:34:18 +02:00
3040a803b2 Mount the hut nix store for SLURM jobs 2023-09-20 19:38:43 +02:00
70a9e855cf Enable direnv integration 2023-09-20 09:32:58 +02:00
aa64e9ef24 Remove bscpkgs from the registry and nixPath
This is done to prevent accidental evaluations where the nixpkgs input
of bscpkgs is still pointing to a different version that the one
specified in the jungle flake. Instead use jungle#bscpkgs.X to get a
package from bscpkgs.
2023-09-15 12:00:33 +02:00
ba2b74fd5a Add bscpkgs and nixpkgs top level attributes
Allows the evaluation of packages of the intermediate overlays.
2023-09-15 12:00:33 +02:00
1ae5d9e25e Use hut packages as the default package set
Allows the user to directly access nixpkgs and bscpkgs from the top
level as `nix build jungle#htop` and `nix build jungle#bsc.ovni`.
2023-09-15 12:00:28 +02:00
ff98ba47c4 Don't fetch registry flakes from the net 2023-09-15 12:00:28 +02:00
599b23ef52 flake.lock: Update
Flake lock file updates:

• Updated input 'bscpkgs':
    'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs/heads/master&rev=6122fef92701701e1a0622550ac0fc5c2beb5906' (2023-09-07)
  → 'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs/heads/master&rev=3a4062ac04be6263c64a481420d8e768c2521b80' (2023-09-14)
2023-09-15 11:50:47 +02:00
8dbee06d1d Revert "Update slurm to 23.02.05.1"
This reverts commit 7bfd786c01.
2023-09-14 15:46:18 +02:00
d522113cb9 Open ports in firewall of compute nodes 2023-09-14 15:45:43 +02:00
7bfd786c01 Update slurm to 23.02.05.1 2023-09-13 17:44:24 +02:00
5a5f4672cd Monitor storage nodes via IPMI too 2023-09-13 15:57:13 +02:00
2646ad4b70 Enable fstrim service 2023-09-12 16:39:45 +02:00
b120a7ca85 Serve the nix store from hut 2023-09-12 12:19:43 +02:00
2a0254b684 Add encrypted munge key with agenix 2023-09-08 19:05:45 +02:00
e3e6e7662d Remove unused large port hole in firewall 2023-09-08 18:22:48 +02:00
868f825e26 Make exporters listen in localhost only 2023-09-08 18:13:04 +02:00
f231dc81f1 Allow only some ports for srun 2023-09-08 17:51:37 +02:00
a758eef354 Block ssfhead from reaching our slurm daemon 2023-09-08 17:36:28 +02:00
9c9c41fb57 Poweroff idle slurm nodes after 1 hour 2023-09-08 16:49:53 +02:00
1a1708f16f Add IB and IPMI node host names 2023-09-08 13:21:37 +02:00
efe1b7e399 flake.lock: Update
Flake lock file updates:

• Updated input 'bscpkgs':
    'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs/heads/master&rev=ee24b910a1cb95bd222e253da43238e843816f2f' (2023-09-01)
  → 'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs/heads/master&rev=6122fef92701701e1a0622550ac0fc5c2beb5906' (2023-09-07)
2023-09-07 11:13:45 +02:00
eb9876aff6 Unlock ovni gitlab runners 2023-09-05 16:59:45 +02:00
8d31c552f5 flake.lock: Update
Flake lock file updates:

• Updated input 'bscpkgs':
    'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs/heads/master&rev=18d64c352c10f9ce74aabddeba5a5db02b74ec27' (2023-08-31)
  → 'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs/heads/master&rev=ee24b910a1cb95bd222e253da43238e843816f2f' (2023-09-01)
• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/d680ded26da5cf104dd2735a51e88d2d8f487b4d' (2023-08-19)
  → 'github:NixOS/nixpkgs/e56990880811a451abd32515698c712788be5720' (2023-09-02)
2023-09-05 15:03:26 +02:00
68f4d54dd1 Add agenix to all nodes 2023-09-04 22:10:43 +02:00
2042d58b72 Add agenix module to ceph 2023-09-04 22:07:07 +02:00
2c8c90e6e4 Remove old secrets 2023-09-04 22:04:32 +02:00
208dcb7dde Mount /ceph in owl1 and owl2 2023-09-04 22:00:36 +02:00
e2f82a6383 Warn about the owl2 omnipath device 2023-09-04 22:00:17 +02:00
d704816de9 Clean owl2 configuration 2023-09-04 21:59:56 +02:00
74ec4eb22a Move the ceph client config to an external module 2023-09-04 21:59:04 +02:00
0a5f9b55f5 Reorganize secrets and ssh keys
The agenix tools needs to read the secrets from a standalone file, but
we also need the same information for the SSH keys.
2023-09-04 21:36:31 +02:00
900de39e2f Add anavarro user 2023-09-04 16:00:01 +02:00
1e466d07df Set zsh inc_append_history option 2023-09-03 16:57:53 +02:00
13807c5e8f Set zsh shell for rarias 2023-09-03 16:46:27 +02:00
d8d6d6d421 Enable zsh and fix key bindings 2023-09-03 16:42:04 +02:00
a242ddd39c Keep a log over time with the config commits 2023-09-03 00:02:14 +02:00
a2c5fe1f5e Configure bscpkgs.nixpkgs to follow nixpkgs 2023-09-02 23:37:59 +02:00
2c52ef9ff0 Store nixos config in /etc/nixos/config.rev 2023-09-02 23:37:11 +02:00
acb91695ac Enable binary emulation for other architectures 2023-08-31 17:27:08 +02:00
9d93760e6f Enable watchdog 2023-08-30 16:32:17 +02:00
aad67b9d99 Enable all osd on boot in lake2 2023-08-30 16:32:17 +02:00
e1d406023d Scrape lake2 too 2023-08-29 12:33:26 +02:00
db6bb90af8 Also enable monitoring in lake2 2023-08-29 12:29:41 +02:00
1266c8f04e Scrape metrics from bay 2023-08-29 11:58:00 +02:00
2b7823788c Add monitoring in the bay node 2023-08-29 11:53:32 +02:00
86eacdd3e5 Add fio tool 2023-08-29 11:27:50 +02:00
4fa074f893 Add ceph tools in hut too 2023-08-28 17:58:21 +02:00
a260a1bc1b Switch ceph logs to journal 2023-08-28 17:58:08 +02:00
8912d2b9bc Update ceph to 18.2.0 in overlay 2023-08-25 18:20:21 +02:00
b4015ded86 Move pkgs overlay to overlay.nix 2023-08-25 18:12:00 +02:00
0f54d63a46 Enable ceph osd daemons in lake2 2023-08-25 14:54:51 +02:00
6c656182f1 Add the lake2 hostname to the hosts 2023-08-25 14:44:35 +02:00
be4187de3c Use the sda for lake2 2023-08-25 13:40:10 +02:00
0b22a1b8a4 Remove netboot module 2023-08-25 13:39:01 +02:00
f18f1937ae Disable pixiecore in hut for now 2023-08-25 13:21:00 +02:00
4b78ec9134 Add PXE helper 2023-08-25 12:05:33 +02:00
6c0c26b3aa Enable netboot again for PXE 2023-08-24 19:08:23 +02:00
fb1744306d Specify the disk by path 2023-08-24 15:27:37 +02:00
394c7ecd7b Prepare lake2 config after bootstrap
The disk ID is different under NixOS.
2023-08-24 13:54:53 +02:00
3276f54e86 Add lake2 bootstrap config 2023-08-24 12:30:46 +02:00
4c806b8ae9 Add section to enable serial console 2023-08-24 12:29:44 +02:00
832866cbfa Add agenix to PATH in hut 2023-08-23 17:42:50 +02:00
9fc393bb6a Store ceph secret key in age
This allows a node to mount the ceph FS without any extra ceph
configuration in /etc/ceph.
2023-08-23 17:26:44 +02:00
d81d9d58e1 Add rarias key for secrets 2023-08-23 17:15:26 +02:00
d54dcc8d8f Add ceph metrics to prometheus 2023-08-22 16:33:55 +02:00
a5fae4a289 Mount the ceph filesystem in hut 2023-08-22 16:15:46 +02:00
a355926cf0 Add ceph config in bay 2023-08-22 15:58:48 +02:00
d7a4420205 Add the bay host name 2023-08-22 15:56:09 +02:00
0b55ce3d02 Remove netboot and fixes 2023-08-22 12:12:15 +02:00
0ce574800e Add bay node 2023-08-22 12:12:15 +02:00
a7e09e55df Update flake 2023-08-22 11:28:54 +02:00
1622b3e7fc Monitor power from other nodes via LAN 2023-08-22 11:28:54 +02:00
3424cac761 Increase prometheus retention time to one year 2023-08-22 11:28:54 +02:00
f98af9aeef Don't set all_proxy 2023-08-22 11:28:54 +02:00
8c14b75e44 Update nixpkgs to fix docker problem 2023-07-28 14:24:51 +02:00
e497e1b88b Allow access to devices for node_exporter 2023-07-28 13:55:35 +02:00
07411beb49 GRUB version no longer needed 2023-07-27 17:22:20 +02:00
e8bab9928d Upgrade flake: nixpkgs, bscpkgs and agenix 2023-07-27 17:19:17 +02:00
544d5a3d69 Kill slurmd remaining processes on upgrade 2023-07-27 14:49:20 +02:00
312f2cb368 koro: Add vlopez user 2023-07-21 13:00:43 +02:00
45ac6e95e9 Add koro node 2023-07-21 13:00:08 +02:00
e6bb6e735d eudy: Add fcsv3 and intermediate versions for testing 2023-07-21 11:27:51 +02:00
cfbfcdbe8c eudy: Enable memory overcommit 2023-07-21 11:27:51 +02:00
c31bfd6b4d eudy: disable all cpu mitigations 2023-07-21 11:27:51 +02:00
d20fa359d9 Enable NTP using the BSC time server 2023-06-30 14:02:15 +02:00
9be15fdad2 Add the ssfhead node as gateway 2023-06-30 14:01:35 +02:00
13e365002c Use our host names first by default 2023-06-23 16:22:18 +02:00
a38072762f Add DNS tools to resolve hosts 2023-06-23 16:15:45 +02:00
adf1ff29a7 Lower perf_event_paranoid to -1 2023-06-23 16:01:27 +02:00
1ec8d7a625 Set perf paranoid to 0 by default 2023-06-21 16:24:19 +02:00
f78f4f5822 Add perf to packages 2023-06-21 15:41:06 +02:00
67a57cb3e5 Allow srun to specify the cpu binding
The task/affinity plugin needs to be selected.
2023-06-21 13:16:23 +02:00
85896f8546 Move authorized keys to users.nix 2023-06-20 14:08:34 +02:00
5e728773c3 Add rpenacob user 2023-06-20 12:54:26 +02:00
0a06cf564b Add osumb to the system packages 2023-06-16 19:22:41 +02:00
db26b2ae37 flake.lock: Update
Flake lock file updates:

• Updated input 'bscpkgs':
    'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs%2fheads%2fmaster&rev=c775ee4d6f76aded05b08ae13924c302f18f9b2c' (2023-04-26)
  → 'git+https://pm.bsc.es/gitlab/rarias/bscpkgs.git?ref=refs%2fheads%2fmaster&rev=cbe9af5d042e9d5585fe2acef65a1347c68b2fbd' (2023-06-16)
2023-06-16 18:33:54 +02:00
f7d00dec25 Set mpi to mpich by default in bscpkgs 2023-06-16 18:26:51 +02:00
2053ec82b7 Add missing parameter to extend 2023-06-16 18:26:51 +02:00
f2434a17c2 Use explicit order in overlays 2023-06-16 18:26:51 +02:00
1f7045fcfe Replace mpi inside bsc attribute 2023-06-16 18:26:51 +02:00
0c4a1efa27 Add mpich overlay 2023-06-16 18:26:51 +02:00
530958496b Add coments in slurm config 2023-06-16 18:26:50 +02:00
df378a2933 Add eudy host key to known hosts 2023-06-16 17:29:48 +02:00
2a0fe5a137 Rename xeon08 to eudy
From Eudyptula, a little penguin.
2023-06-16 17:16:05 +02:00
dfbeafa2b2 Update rebuild script for all nodes 2023-06-16 12:13:07 +02:00
7d4281a5c1 Add ssh host keys 2023-06-16 12:01:12 +02:00
dfea0be2d9 Set the name of the slurm cluster to jungle 2023-06-16 12:00:54 +02:00
df91da8c34 Change owl hostnames 2023-06-16 11:42:39 +02:00
30c21155af Add owl and all partition 2023-06-16 11:34:00 +02:00
a43016ebee Simplify flake and expose host pkgs
The configuration of the machines is now moved to m/
2023-06-16 11:31:31 +02:00
801bb4ba3c Rename xeon07 to hut 2023-06-14 17:28:40 +02:00
a9d740e95a Remove profiles older than 30 days with gc 2023-06-14 17:28:39 +02:00
08eaf312f2 Add ncdu to system packages 2023-06-14 17:28:39 +02:00
0b57bbc6e3 Move arocanon user from xeon08 to common 2023-06-14 16:22:43 +02:00
6558a6ab77 xeon08: Add config for kernel non-voluntary preemption 2023-06-14 16:17:33 +02:00
0d196af473 xeon08: Add perf 2023-06-14 15:42:20 +02:00
d35becb663 xeon08: Enable lttng lockdep tracepoints 2023-06-14 15:42:20 +02:00
5421eab09a xeon08: Add lttng module and tools 2023-06-14 15:42:20 +02:00
1c7de2f7c9 Serve grafana in https://jungle.bsc.es/grafana 2023-05-31 18:12:14 +02:00
c7692995f4 Add tree command 2023-05-31 18:11:34 +02:00
0af185afd8 Add file to system packages 2023-05-31 18:11:34 +02:00
470b3d2512 Add gnumake to system packages 2023-05-31 18:11:34 +02:00
1bf6747b3a Add cmake to system packages 2023-05-31 18:11:34 +02:00
59bf51dfde Add ix to common packages 2023-05-31 18:11:34 +02:00
b72d9936a2 Improve documentation 2023-05-26 11:38:27 +02:00
5ebb57deff Add gitignore 2023-05-26 11:38:27 +02:00
5b82a72647 Set intel_pstate=passive and disable frequency boost 2023-05-26 11:38:26 +02:00
a5c7205481 Add xeon08 basic config 2023-05-26 11:38:26 +02:00
fd1b467a60 Add nixos-config.nix to easily enable nix repl 2023-05-26 11:29:59 +02:00
882161b21e Automatically resume restarted nodes in SLURM 2023-05-18 12:48:04 +02:00
5e8ff50c98 Allow public dashboards in grafana 2023-05-09 18:53:31 +02:00
cdb0688ec1 Add hal ssh key 2023-05-09 18:37:38 +02:00
ebb5e94416 Increase the number of CPUs to 56 for nOS-V docker 2023-05-02 17:47:57 +02:00
89049d0b1f Allow 5 concurrent buils in the gitlab-runner 2023-05-02 17:38:10 +02:00
6d16772d07 Simplify bash prompt 2023-04-28 18:15:04 +02:00
e37f9e2b0f Roolback to bash as default shell
Zsh doesn't behave properly, it needs further configuration.
2023-04-28 17:59:19 +02:00
9767238c76 Use pmix by default in slurm 2023-04-28 17:07:48 +02:00
a5a0fd9b6f Increase locked memory to 1 GiB 2023-04-28 12:34:51 +02:00
be69070f61 Use the latest kernel 2023-04-28 11:51:38 +02:00
53f6dcec8d Disable osnoise and hwlat tracer for now
Reuse nix cache to avoid rebuilding the kernel.
2023-04-28 11:19:47 +02:00
87c4521de3 Update nixpkgs to nixos-unstable 2023-04-28 11:18:37 +02:00
461d6d2f34 Update nixpkgs 2023-04-28 11:13:46 +02:00
ef2ffa61c3 Update ib interface name in xeon02
It seems to be plugged in another PCI port
2023-04-27 18:29:32 +02:00
c0b23ad450 Add steps in install documentation 2023-04-27 17:30:53 +02:00
f12ba9f8b0 Add minimal netboot module to build kexec image 2023-04-27 16:36:15 +02:00
a211e9ebee Add xeon02 configuration 2023-04-27 16:28:12 +02:00
5dbbb27c43 Refacto slurm configuration into compute/control 2023-04-27 16:27:04 +02:00
69bb2128db Lock flakes and add inputs 2023-04-27 13:52:59 +02:00
de7cae6208 Test flakes 2023-04-26 14:27:02 +02:00
de4ac8cbd6 Enable slurm in xeon01 2023-04-26 14:10:36 +02:00
e1dcad50d0 Use xeon07 as control machine 2023-04-26 14:10:36 +02:00
0120be66fb Remove xeon07 overlay to load upstream slurm 2023-04-26 14:10:36 +02:00
6cb079a44e Add script to rebuild configuration 2023-04-26 14:09:23 +02:00
a5449067a7 Add configuration for xeon01 2023-04-26 11:44:00 +00:00
1009736d81 Load overlays from /config 2023-04-26 11:44:00 +00:00
a94765e8ae Move net.nix to common 2023-04-26 11:44:00 +00:00
9630b23ce2 Remove host specific network options from net.nix 2023-04-26 11:44:00 +00:00
ed158ee87f Move ssh.nix to common 2023-04-26 11:44:00 +00:00
480dd95d9b Move overlays.nix to common 2023-04-26 11:44:00 +00:00
f7b18098b1 Move users.nix to common 2023-04-26 11:44:00 +00:00
c580254dde Move common options from configuration.nix 2023-04-26 11:44:00 +00:00
7e6c395ff8 Move the remaining hw config to common 2023-04-26 11:44:00 +00:00
6978677cb5 Move boot config to common/boot.nix 2023-04-26 11:44:00 +00:00
f5b4580dae Move filesystems config to common/fs.nix 2023-04-26 11:44:00 +00:00
035becd018 Use partition labels for / and swap 2023-04-26 11:44:00 +00:00
a7fb69ab92 Move fs.nix to common 2023-04-26 11:44:00 +00:00
733eb93f23 Move boot.nix to common 2023-04-26 11:44:00 +00:00
b60e821eaa Move disk selection to configuration.nix 2023-04-26 11:44:00 +00:00
f43d549294 Add common directory 2023-04-26 11:44:00 +00:00
218 changed files with 1792 additions and 27042 deletions

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46
doc/trim.sh Executable file
View File

@@ -0,0 +1,46 @@
#!/bin/sh
# Trims the jungle repository by moving the website to its own repository and
# removing it from jungle. It also removes big pdf files and kernel
# configurations so the jungle repository is small.
set -e
if [ -e oldjungle -o -e newjungle -o -e website ]; then
echo "remove oldjungle/, newjungle/ and website/ first"
exit 1
fi
# Clone the old jungle repo
git clone gitea@tent:rarias/jungle.git oldjungle
# First split the website into a new repository
mkdir website && git -C website init -b master
git-filter-repo \
--path web \
--subdirectory-filter web \
--source oldjungle \
--target website
# Then remove the website, pdf files and big kernel configs
mkdir newjungle && git -C newjungle init -b master
git-filter-repo \
--invert-paths \
--path web \
--path-glob 'doc*.pdf' \
--path-glob '**/kernel/configs/lockdep' \
--path-glob '**/kernel/configs/defconfig' \
--source oldjungle \
--target newjungle
set -x
du -sh oldjungle newjungle website
# 57M oldjungle
# 2,3M newjungle
# 6,4M website
du -sh --exclude=.git oldjungle newjungle website
# 30M oldjungle
# 700K newjungle
# 3,5M website

34
flake.lock generated
View File

@@ -10,11 +10,11 @@
"systems": "systems"
},
"locked": {
"lastModified": 1723293904,
"narHash": "sha256-b+uqzj+Wa6xgMS9aNbX4I+sXeb5biPDi39VgvSFqFvU=",
"lastModified": 1750173260,
"narHash": "sha256-9P1FziAwl5+3edkfFcr5HeGtQUtrSdk/MksX39GieoA=",
"owner": "ryantm",
"repo": "agenix",
"rev": "f6291c5935fdc4e0bef208cfc0dcab7e3f7a1c41",
"rev": "531beac616433bac6f9e2a19feb8e99a22a66baf",
"type": "github"
},
"original": {
@@ -30,11 +30,11 @@
]
},
"locked": {
"lastModified": 1732868163,
"narHash": "sha256-qck4h298AgcNI6BnGhEwl26MTLXjumuJVr+9kak7uPo=",
"lastModified": 1749650500,
"narHash": "sha256-2MHfVPV6RA7qPSCtXh4+KK0F0UjN+J4z8//+n6NK7Xs=",
"ref": "refs/heads/master",
"rev": "6782fc6c5b5a29e84a7f2c2d1064f4bcb1288c0f",
"revCount": 952,
"rev": "9d1944c658929b6f98b3f3803fead4d1b91c4405",
"revCount": 961,
"type": "git",
"url": "https://git.sr.ht/~rodarima/bscpkgs"
},
@@ -51,11 +51,11 @@
]
},
"locked": {
"lastModified": 1700795494,
"narHash": "sha256-gzGLZSiOhf155FW7262kdHo2YDeugp3VuIFb4/GGng0=",
"lastModified": 1744478979,
"narHash": "sha256-dyN+teG9G82G+m+PX/aSAagkC+vUv0SgUw3XkPhQodQ=",
"owner": "lnl7",
"repo": "nix-darwin",
"rev": "4b9b83d5a92e8c1fbfd8eb27eda375908c11ec4d",
"rev": "43975d782b418ebf4969e9ccba82466728c2851b",
"type": "github"
},
"original": {
@@ -73,11 +73,11 @@
]
},
"locked": {
"lastModified": 1703113217,
"narHash": "sha256-7ulcXOk63TIT2lVDSExj7XzFx09LpdSAPtvgtM7yQPE=",
"lastModified": 1745494811,
"narHash": "sha256-YZCh2o9Ua1n9uCvrvi5pRxtuVNml8X2a03qIFfRKpFs=",
"owner": "nix-community",
"repo": "home-manager",
"rev": "3bfaacf46133c037bb356193bd2f1765d9dc82c1",
"rev": "abfad3d2958c9e6300a883bd443512c55dfeb1be",
"type": "github"
},
"original": {
@@ -88,16 +88,16 @@
},
"nixpkgs": {
"locked": {
"lastModified": 1736867362,
"narHash": "sha256-i/UJ5I7HoqmFMwZEH6vAvBxOrjjOJNU739lnZnhUln8=",
"lastModified": 1752436162,
"narHash": "sha256-Kt1UIPi7kZqkSc5HVj6UY5YLHHEzPBkgpNUByuyxtlw=",
"owner": "NixOS",
"repo": "nixpkgs",
"rev": "9c6b49aeac36e2ed73a8c472f1546f6d9cf1addc",
"rev": "dfcd5b901dbab46c9c6e80b265648481aafb01f8",
"type": "github"
},
"original": {
"owner": "NixOS",
"ref": "nixos-24.11",
"ref": "nixos-25.05",
"repo": "nixpkgs",
"type": "github"
}

View File

@@ -1,6 +1,6 @@
{
inputs = {
nixpkgs.url = "github:NixOS/nixpkgs/nixos-24.11";
nixpkgs.url = "github:NixOS/nixpkgs/nixos-25.05";
agenix.url = "github:ryantm/agenix";
agenix.inputs.nixpkgs.follows = "nixpkgs";
bscpkgs.url = "git+https://git.sr.ht/~rodarima/bscpkgs";
@@ -27,6 +27,8 @@ in
lake2 = mkConf "lake2";
raccoon = mkConf "raccoon";
fox = mkConf "fox";
apex = mkConf "apex";
weasel = mkConf "weasel";
};
packages.x86_64-linux = self.nixosConfigurations.hut.pkgs // {

View File

@@ -2,25 +2,28 @@
# here all the public keys
rec {
hosts = {
hut = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAICO7jIp6JRnRWTMDsTB/aiaICJCl4x8qmKMPSs4lCqP1 hut";
owl1 = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIMqMEXO0ApVsBA6yjmb0xP2kWyoPDIWxBB0Q3+QbHVhv owl1";
owl2 = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIHurEYpQzNHqWYF6B9Pd7W8UPgF3BxEg0BvSbsA7BAdK owl2";
eudy = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIL+WYPRRvZupqLAG0USKmd/juEPmisyyJaP8hAgYwXsG eudy";
koro = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIImiTFDbxyUYPumvm8C4mEnHfuvtBY1H8undtd6oDd67 koro";
bay = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAICvGBzpRQKuQYHdlUQeAk6jmdbkrhmdLwTBqf3el7IgU bay";
lake2 = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAINo66//S1yatpQHE/BuYD/Gfq64TY7ZN5XOGXmNchiO0 lake2";
fox = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIDwItIk5uOJcQEVPoy/CVGRzfmE1ojrdDcI06FrU4NFT fox";
tent = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIFAtTpHtdYoelbknD/IcfBlThwLKJv/dSmylOgpg3FRM tent";
hut = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAICO7jIp6JRnRWTMDsTB/aiaICJCl4x8qmKMPSs4lCqP1 hut";
owl1 = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIMqMEXO0ApVsBA6yjmb0xP2kWyoPDIWxBB0Q3+QbHVhv owl1";
owl2 = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIHurEYpQzNHqWYF6B9Pd7W8UPgF3BxEg0BvSbsA7BAdK owl2";
eudy = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIL+WYPRRvZupqLAG0USKmd/juEPmisyyJaP8hAgYwXsG eudy";
koro = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIImiTFDbxyUYPumvm8C4mEnHfuvtBY1H8undtd6oDd67 koro";
bay = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAICvGBzpRQKuQYHdlUQeAk6jmdbkrhmdLwTBqf3el7IgU bay";
lake2 = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAINo66//S1yatpQHE/BuYD/Gfq64TY7ZN5XOGXmNchiO0 lake2";
fox = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIDwItIk5uOJcQEVPoy/CVGRzfmE1ojrdDcI06FrU4NFT fox";
tent = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIFAtTpHtdYoelbknD/IcfBlThwLKJv/dSmylOgpg3FRM tent";
apex = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIBvUFjSfoxXnKwXhEFXx5ckRKJ0oewJ82mRitSMNMKjh apex";
weasel = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIFLJrQ8BF6KcweQV8pLkSbFT+tbDxSG9qxrdQE65zJZp weasel";
raccoon = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIGNQttFvL0dNEyy7klIhLoK4xXOeM2/K9R7lPMTG3qvK raccoon";
};
hostGroup = with hosts; rec {
untrusted = [ fox ];
compute = [ owl1 owl2 ];
playground = [ eudy koro ];
compute = [ owl1 owl2 fox raccoon ];
playground = [ eudy koro weasel ];
storage = [ bay lake2 ];
monitor = [ hut ];
login = [ apex ];
system = storage ++ monitor;
system = storage ++ monitor ++ login;
safe = system ++ compute;
all = safe ++ playground;
};
@@ -28,6 +31,7 @@ rec {
admins = {
"rarias@hut" = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIE1oZTPtlEXdGt0Ak+upeCIiBdaDQtcmuWoTUCVuSVIR rarias@hut";
"rarias@tent" = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIIwlWSBTZi74WTz5xn6gBvTmCoVltmtIAeM3RMmkh4QZ rarias@tent";
"rarias@fox" = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIDSbw3REAKECV7E2c/e2XJITudJQWq2qDSe2N1JHqHZd rarias@fox";
root = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIII/1TNArcwA6D47mgW4TArwlxQRpwmIGiZDysah40Gb root@hut";
};
}

69
m/apex/configuration.nix Normal file
View File

@@ -0,0 +1,69 @@
{ lib, config, pkgs, ... }:
{
imports = [
../common/xeon.nix
../common/ssf/hosts.nix
../module/ceph.nix
../module/hut-substituter.nix
../module/slurm-server.nix
./nfs.nix
./wireguard.nix
];
# Don't install grub MBR for now
boot.loader.grub.device = "nodev";
boot.initrd.kernelModules = [
"megaraid_sas" # For HW RAID
];
environment.systemPackages = with pkgs; [
storcli # To manage HW RAID
];
fileSystems."/home" = {
device = "/dev/disk/by-label/home";
fsType = "ext4";
};
# No swap, there is plenty of RAM
swapDevices = lib.mkForce [];
networking = {
hostName = "apex";
defaultGateway = "84.88.53.233";
nameservers = [ "8.8.8.8" ];
# Public facing interface
interfaces.eno1.ipv4.addresses = [ {
address = "84.88.53.236";
prefixLength = 29;
} ];
# Internal LAN to our Ethernet switch
interfaces.eno2.ipv4.addresses = [ {
address = "10.0.40.30";
prefixLength = 24;
} ];
# Infiniband over Omnipath switch (disconnected for now)
# interfaces.ibp5s0 = {};
nat = {
enable = true;
internalInterfaces = [ "eno2" ];
externalInterface = "eno1";
};
};
networking.firewall = {
extraCommands = ''
# Blackhole BSC vulnerability scanner (OpenVAS) as it is spamming our
# logs. Insert as first position so we also protect SSH.
iptables -I nixos-fw 1 -p tcp -s 192.168.8.16 -j nixos-fw-refuse
# Same with opsmonweb01.bsc.es which seems to be trying to access via SSH
iptables -I nixos-fw 2 -p tcp -s 84.88.52.176 -j nixos-fw-refuse
'';
};
}

48
m/apex/nfs.nix Normal file
View File

@@ -0,0 +1,48 @@
{ ... }:
{
services.nfs.server = {
enable = true;
lockdPort = 4001;
mountdPort = 4002;
statdPort = 4000;
exports = ''
/home 10.0.40.0/24(rw,async,no_subtree_check,no_root_squash)
/home 10.106.0.0/24(rw,async,no_subtree_check,no_root_squash)
'';
};
networking.firewall = {
# Check with `rpcinfo -p`
extraCommands = ''
# Accept NFS traffic from compute nodes but not from the outside
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 --dport 111 -j nixos-fw-accept
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 --dport 2049 -j nixos-fw-accept
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 --dport 4000 -j nixos-fw-accept
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 --dport 4001 -j nixos-fw-accept
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 --dport 4002 -j nixos-fw-accept
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 --dport 20048 -j nixos-fw-accept
# Same but UDP
iptables -A nixos-fw -p udp -s 10.0.40.0/24 --dport 111 -j nixos-fw-accept
iptables -A nixos-fw -p udp -s 10.0.40.0/24 --dport 2049 -j nixos-fw-accept
iptables -A nixos-fw -p udp -s 10.0.40.0/24 --dport 4000 -j nixos-fw-accept
iptables -A nixos-fw -p udp -s 10.0.40.0/24 --dport 4001 -j nixos-fw-accept
iptables -A nixos-fw -p udp -s 10.0.40.0/24 --dport 4002 -j nixos-fw-accept
iptables -A nixos-fw -p udp -s 10.0.40.0/24 --dport 20048 -j nixos-fw-accept
# Accept NFS traffic from wg0
iptables -A nixos-fw -p tcp -i wg0 -s 10.106.0.0/24 --dport 111 -j nixos-fw-accept
iptables -A nixos-fw -p tcp -i wg0 -s 10.106.0.0/24 --dport 2049 -j nixos-fw-accept
iptables -A nixos-fw -p tcp -i wg0 -s 10.106.0.0/24 --dport 4000 -j nixos-fw-accept
iptables -A nixos-fw -p tcp -i wg0 -s 10.106.0.0/24 --dport 4001 -j nixos-fw-accept
iptables -A nixos-fw -p tcp -i wg0 -s 10.106.0.0/24 --dport 4002 -j nixos-fw-accept
iptables -A nixos-fw -p tcp -i wg0 -s 10.106.0.0/24 --dport 20048 -j nixos-fw-accept
# Same but UDP
iptables -A nixos-fw -p udp -i wg0 -s 10.106.0.0/24 --dport 111 -j nixos-fw-accept
iptables -A nixos-fw -p udp -i wg0 -s 10.106.0.0/24 --dport 2049 -j nixos-fw-accept
iptables -A nixos-fw -p udp -i wg0 -s 10.106.0.0/24 --dport 4000 -j nixos-fw-accept
iptables -A nixos-fw -p udp -i wg0 -s 10.106.0.0/24 --dport 4001 -j nixos-fw-accept
iptables -A nixos-fw -p udp -i wg0 -s 10.106.0.0/24 --dport 4002 -j nixos-fw-accept
iptables -A nixos-fw -p udp -i wg0 -s 10.106.0.0/24 --dport 20048 -j nixos-fw-accept
'';
};
}

42
m/apex/wireguard.nix Normal file
View File

@@ -0,0 +1,42 @@
{ config, ... }:
{
networking.firewall = {
allowedUDPPorts = [ 666 ];
};
age.secrets.wgApex.file = ../../secrets/wg-apex.age;
# Enable WireGuard
networking.wireguard.enable = true;
networking.wireguard.interfaces = {
# "wg0" is the network interface name. You can name the interface arbitrarily.
wg0 = {
ips = [ "10.106.0.30/24" ];
listenPort = 666;
privateKeyFile = config.age.secrets.wgApex.path;
# Public key: VwhcN8vSOzdJEotQTpmPHBC52x3Hbv1lkFIyKubrnUA=
peers = [
{
name = "fox";
publicKey = "VfMPBQLQTKeyXJSwv8wBhc6OV0j2qAxUpX3kLHunK2Y=";
allowedIPs = [ "10.106.0.1/32" ];
endpoint = "fox.ac.upc.edu:666";
# Send keepalives every 25 seconds. Important to keep NAT tables alive.
persistentKeepalive = 25;
}
{
name = "raccoon";
publicKey = "QUfnGXSMEgu2bviglsaSdCjidB51oEDBFpnSFcKGfDI=";
allowedIPs = [ "10.106.0.236/32" "192.168.0.0/16" "10.0.44.0/24" ];
}
];
};
};
networking.hosts = {
"10.106.0.1" = [ "fox" ];
"10.106.0.236" = [ "raccoon" ];
"10.0.44.4" = [ "tent" ];
};
}

View File

@@ -3,6 +3,7 @@
{
imports = [
../common/ssf.nix
../module/hut-substituter.nix
../module/monitoring.nix
];

View File

@@ -3,6 +3,7 @@
# Includes the basic configuration for an Intel server.
imports = [
./base/agenix.nix
./base/always-power-on.nix
./base/august-shutdown.nix
./base/boot.nix
./base/env.nix
@@ -10,6 +11,7 @@
./base/hw.nix
./base/net.nix
./base/nix.nix
./base/nosv.nix
./base/ntp.nix
./base/rev.nix
./base/ssh.nix

View File

@@ -0,0 +1,8 @@
{
imports = [
../../module/power-policy.nix
];
# Turn on as soon as we have power
power.policy = "always-on";
}

View File

@@ -1,12 +1,12 @@
{
# Shutdown all machines on August 2nd at 11:00 AM, so we can protect the
# Shutdown all machines on August 3rd at 22:00, so we can protect the
# hardware from spurious electrical peaks on the yearly electrical cut for
# manteinance that starts on August 4th.
systemd.timers.august-shutdown = {
description = "Shutdown on August 2nd for maintenance";
description = "Shutdown on August 3rd for maintenance";
wantedBy = [ "timers.target" ];
timerConfig = {
OnCalendar = "*-08-02 11:00:00";
OnCalendar = "*-08-03 22:00:00";
RandomizedDelaySec = "10min";
Unit = "systemd-poweroff.service";
};

View File

@@ -3,8 +3,8 @@
{
environment.systemPackages = with pkgs; [
vim wget git htop tmux pciutils tcpdump ripgrep nix-index nixos-option
nix-diff ipmitool freeipmi ethtool lm_sensors ix cmake gnumake file tree
ncdu config.boot.kernelPackages.perf ldns
nix-diff ipmitool freeipmi ethtool lm_sensors cmake gnumake file tree
ncdu config.boot.kernelPackages.perf ldns pv
# From bsckgs overlay
osumb
];

View File

@@ -1,4 +1,4 @@
{ pkgs, ... }:
{ pkgs, lib, ... }:
{
networking = {
@@ -10,10 +10,14 @@
allowedTCPPorts = [ 22 ];
};
# Make sure we use iptables
nftables.enable = lib.mkForce false;
hosts = {
"84.88.53.236" = [ "ssfhead.bsc.es" "ssfhead" ];
"84.88.51.152" = [ "raccoon" ];
"84.88.51.142" = [ "raccoon-ipmi" ];
"192.168.11.12" = [ "bscpm04.bsc.es" ];
"192.168.11.15" = [ "gitlab-internal.bsc.es" ];
};
};
}

View File

@@ -6,6 +6,8 @@
(import ../../../pkgs/overlay.nix)
];
nixpkgs.config.allowUnfree = true;
nix = {
nixPath = [
"nixpkgs=${nixpkgs}"

9
m/common/base/nosv.nix Normal file
View File

@@ -0,0 +1,9 @@
{ ... }:
{
nix.settings.system-features = [ "nosv" ];
programs.nix-required-mounts.enable = true;
programs.nix-required-mounts.allowedPatterns.nosv.paths = [
"/sys/devices/system/cpu"
"/sys/devices/system/node"
];
}

View File

@@ -56,7 +56,7 @@
home = "/home/Computational/rpenacob";
description = "Raúl Peñacoba";
group = "Computational";
hosts = [ "owl1" "owl2" "hut" "tent" "fox" ];
hosts = [ "apex" "owl1" "owl2" "hut" "tent" "fox" ];
hashedPassword = "$6$TZm3bDIFyPrMhj1E$uEDXoYYd1z2Wd5mMPfh3DZAjP7ztVjJ4ezIcn82C0ImqafPA.AnTmcVftHEzLB3tbe2O4SxDyPSDEQgJ4GOtj/";
openssh.authorizedKeys.keys = [
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIFYfXg37mauGeurqsLpedgA2XQ9d4Nm0ZGo/hI1f7wwH rpenacob@bsc"
@@ -69,10 +69,10 @@
home = "/home/Computational/anavarro";
description = "Antoni Navarro";
group = "Computational";
hosts = [ "hut" "tent" "raccoon" "fox" ];
hashedPassword = "$6$QdNDsuLehoZTYZlb$CDhCouYDPrhoiB7/seu7RF.Gqg4zMQz0n5sA4U1KDgHaZOxy2as9pbIGeF8tOHJKRoZajk5GiaZv0rZMn7Oq31";
hosts = [ "apex" "hut" "tent" "raccoon" "fox" "weasel" ];
hashedPassword = "$6$EgturvVYXlKgP43g$gTN78LLHIhaF8hsrCXD.O6mKnZSASWSJmCyndTX8QBWT6wTlUhcWVAKz65lFJPXjlJA4u7G1ydYQ0GG6Wk07b1";
openssh.authorizedKeys.keys = [
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAILWjRSlKgzBPZQhIeEtk6Lvws2XNcYwHcwPv4osSgst5 anavarro@ssfhead"
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIMsbM21uepnJwPrRe6jYFz8zrZ6AYMtSEvvt4c9spmFP toni@delltoni"
];
};
@@ -82,7 +82,7 @@
home = "/home/Computational/abonerib";
description = "Aleix Boné";
group = "Computational";
hosts = [ "owl1" "owl2" "hut" "tent" "raccoon" "fox" ];
hosts = [ "apex" "owl1" "owl2" "hut" "tent" "raccoon" "fox" "weasel" ];
hashedPassword = "$6$V1EQWJr474whv7XJ$OfJ0wueM2l.dgiJiiah0Tip9ITcJ7S7qDvtSycsiQ43QBFyP4lU0e0HaXWps85nqB4TypttYR4hNLoz3bz662/";
openssh.authorizedKeys.keys = [
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIIIFiqXqt88VuUfyANkZyLJNiuroIITaGlOOTMhVDKjf abonerib@bsc"
@@ -95,7 +95,7 @@
home = "/home/Computational/vlopez";
description = "Victor López";
group = "Computational";
hosts = [ "koro" ];
hosts = [ "apex" "koro" ];
hashedPassword = "$6$0ZBkgIYE/renVqtt$1uWlJsb0FEezRVNoETTzZMx4X2SvWiOsKvi0ppWCRqI66S6TqMBXBdP4fcQyvRRBt0e4Z7opZIvvITBsEtO0f0";
openssh.authorizedKeys.keys = [
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIGMwlUZRf9jfG666Qa5Sb+KtEhXqkiMlBV2su3x/dXHq victor@arch"
@@ -108,7 +108,7 @@
home = "/home/Computational/dbautist";
description = "Dylan Bautista Cases";
group = "Computational";
hosts = [ "hut" "tent" "raccoon" ];
hosts = [ "apex" "hut" "tent" "raccoon" ];
hashedPassword = "$6$a2lpzMRVkG9nSgIm$12G6.ka0sFX1YimqJkBAjbvhRKZ.Hl090B27pdbnQOW0wzyxVWySWhyDDCILjQELky.HKYl9gqOeVXW49nW7q/";
openssh.authorizedKeys.keys = [
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIAb+EQBoS98zrCwnGKkHKwMLdYABMTqv7q9E0+T0QmkS dbautist@bsc-848818791"
@@ -121,7 +121,7 @@
home = "/home/Computational/dalvare1";
description = "David Álvarez";
group = "Computational";
hosts = [ "hut" "tent" "fox" ];
hosts = [ "apex" "hut" "tent" "fox" ];
hashedPassword = "$6$mpyIsV3mdq.rK8$FvfZdRH5OcEkUt5PnIUijWyUYZvB1SgeqxpJ2p91TTe.3eQIDTcLEQ5rxeg.e5IEXAZHHQ/aMsR5kPEujEghx0";
openssh.authorizedKeys.keys = [
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIGEfy6F4rF80r4Cpo2H5xaWqhuUZzUsVsILSKGJzt5jF dalvare1@ssfhead"
@@ -134,7 +134,7 @@
home = "/home/Computational/varcila";
description = "Vincent Arcila";
group = "Computational";
hosts = [ "hut" "tent" "fox" ];
hosts = [ "apex" "hut" "tent" "fox" ];
hashedPassword = "$6$oB0Tcn99DcM4Ch$Vn1A0ulLTn/8B2oFPi9wWl/NOsJzaFAWjqekwcuC9sMC7cgxEVb.Nk5XSzQ2xzYcNe5MLtmzkVYnRS1CqP39Y0";
openssh.authorizedKeys.keys = [
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIKGt0ESYxekBiHJQowmKpfdouw0hVm3N7tUMtAaeLejK vincent@varch"
@@ -154,6 +154,32 @@
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIIV5LEAII5rfe1hYqDYIIrhb1gOw7RcS1p2mhOTqG+zc pedro@pedro-ThinkPad-P14s-Gen-2a"
];
};
csiringo = {
uid = 9653;
isNormalUser = true;
home = "/home/Computational/csiringo";
description = "Cesare Siringo";
group = "Computational";
hosts = [ ];
hashedPassword = "$6$0IsZlju8jFukLlAw$VKm0FUXbS.mVmPm3rcJeizTNU4IM5Nmmy21BvzFL.cQwvlGwFI1YWRQm6gsbd4nbg47mPDvYkr/ar0SlgF6GO1";
openssh.authorizedKeys.keys = [
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIHA65zvvG50iuFEMf+guRwZB65jlGXfGLF4HO+THFaed csiringo@bsc.es"
];
};
acinca = {
uid = 9654;
isNormalUser = true;
home = "/home/Computational/acinca";
description = "Arnau Cinca";
group = "Computational";
hosts = [ "apex" "hut" "fox" "owl1" "owl2" ];
hashedPassword = "$6$S6PUeRpdzYlidxzI$szyvWejQ4hEN76yBYhp1diVO5ew1FFg.cz4lKiXt2Idy4XdpifwrFTCIzLTs5dvYlR62m7ekA5MrhcVxR5F/q/";
openssh.authorizedKeys.keys = [
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIFmMqKqPg4uocNOr3O41kLbZMOMJn3m2ZdN1JvTR96z3 bsccns@arnau-bsc"
];
};
};
groups = {

View File

@@ -3,7 +3,8 @@
imports = [
./xeon.nix
./ssf/fs.nix
./ssf/hosts.nix
./ssf/hosts-remote.nix
./ssf/net.nix
./ssf/ssh.nix
];
}

View File

@@ -0,0 +1,9 @@
{ pkgs, ... }:
{
networking.hosts = {
# Remote hosts visible from compute nodes
"10.106.0.236" = [ "raccoon" ];
"10.0.44.4" = [ "tent" ];
};
}

23
m/common/ssf/hosts.nix Normal file
View File

@@ -0,0 +1,23 @@
{ pkgs, ... }:
{
networking.hosts = {
# Login
"10.0.40.30" = [ "apex" ];
# Storage
"10.0.40.40" = [ "bay" ]; "10.0.42.40" = [ "bay-ib" ]; "10.0.40.141" = [ "bay-ipmi" ];
"10.0.40.41" = [ "oss01" ]; "10.0.42.41" = [ "oss01-ib0" ]; "10.0.40.142" = [ "oss01-ipmi" ];
"10.0.40.42" = [ "lake2" ]; "10.0.42.42" = [ "lake2-ib" ]; "10.0.40.143" = [ "lake2-ipmi" ];
# Xeon compute
"10.0.40.1" = [ "owl1" ]; "10.0.42.1" = [ "owl1-ib" ]; "10.0.40.101" = [ "owl1-ipmi" ];
"10.0.40.2" = [ "owl2" ]; "10.0.42.2" = [ "owl2-ib" ]; "10.0.40.102" = [ "owl2-ipmi" ];
"10.0.40.3" = [ "xeon03" ]; "10.0.42.3" = [ "xeon03-ib" ]; "10.0.40.103" = [ "xeon03-ipmi" ];
#"10.0.40.4" = [ "tent" ]; "10.0.42.4" = [ "tent-ib" ]; "10.0.40.104" = [ "tent-ipmi" ];
"10.0.40.5" = [ "koro" ]; "10.0.42.5" = [ "koro-ib" ]; "10.0.40.105" = [ "koro-ipmi" ];
"10.0.40.6" = [ "weasel" ]; "10.0.42.6" = [ "weasel-ib" ]; "10.0.40.106" = [ "weasel-ipmi" ];
"10.0.40.7" = [ "hut" ]; "10.0.42.7" = [ "hut-ib" ]; "10.0.40.107" = [ "hut-ipmi" ];
"10.0.40.8" = [ "eudy" ]; "10.0.42.8" = [ "eudy-ib" ]; "10.0.40.108" = [ "eudy-ipmi" ];
};
}

View File

@@ -9,14 +9,6 @@
defaultGateway = "10.0.40.30";
nameservers = ["8.8.8.8"];
proxy = {
default = "http://hut:23080/";
noProxy = "127.0.0.1,localhost,internal.domain,10.0.40.40,hut";
# Don't set all_proxy as go complains and breaks the gitlab runner, see:
# https://github.com/golang/go/issues/16715
allProxy = null;
};
firewall = {
extraCommands = ''
# Prevent ssfhead from contacting our slurmd daemon
@@ -27,64 +19,5 @@
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 --dport 60000:61000 -j nixos-fw-accept
'';
};
extraHosts = ''
10.0.40.30 ssfhead
# Node Entry for node: mds01 (ID=72)
10.0.40.40 bay mds01 mds01-eth0
10.0.42.40 bay-ib mds01-ib0
10.0.40.141 bay-ipmi mds01-ipmi0 mds01-ipmi
# Node Entry for node: oss01 (ID=73)
10.0.40.41 oss01 oss01-eth0
10.0.42.41 oss01-ib0
10.0.40.142 oss01-ipmi0 oss01-ipmi
# Node Entry for node: oss02 (ID=74)
10.0.40.42 lake2 oss02 oss02-eth0
10.0.42.42 lake2-ib oss02-ib0
10.0.40.143 lake2-ipmi oss02-ipmi0 oss02-ipmi
# Node Entry for node: xeon01 (ID=15)
10.0.40.1 owl1 xeon01 xeon01-eth0
10.0.42.1 owl1-ib xeon01-ib0
10.0.40.101 owl1-ipmi xeon01-ipmi0 xeon01-ipmi
# Node Entry for node: xeon02 (ID=16)
10.0.40.2 owl2 xeon02 xeon02-eth0
10.0.42.2 owl2-ib xeon02-ib0
10.0.40.102 owl2-ipmi xeon02-ipmi0 xeon02-ipmi
# Node Entry for node: xeon03 (ID=17)
10.0.40.3 xeon03 xeon03-eth0
10.0.42.3 xeon03-ib0
10.0.40.103 xeon03-ipmi0 xeon03-ipmi
# Node Entry for node: xeon04 (ID=18)
10.0.40.4 xeon04 xeon04-eth0
10.0.42.4 xeon04-ib0
10.0.40.104 xeon04-ipmi0 xeon04-ipmi
# Node Entry for node: xeon05 (ID=19)
10.0.40.5 koro xeon05 xeon05-eth0
10.0.42.5 koro-ib xeon05-ib0
10.0.40.105 koro-ipmi xeon05-ipmi0
# Node Entry for node: xeon06 (ID=20)
10.0.40.6 xeon06 xeon06-eth0
10.0.42.6 xeon06-ib0
10.0.40.106 xeon06-ipmi0 xeon06-ipmi
# Node Entry for node: xeon07 (ID=21)
10.0.40.7 hut xeon07 xeon07-eth0
10.0.42.7 hut-ib xeon07-ib0
10.0.40.107 hut-ipmi xeon07-ipmi0 xeon07-ipmi
# Node Entry for node: xeon08 (ID=22)
10.0.40.8 eudy xeon08 xeon08-eth0
10.0.42.8 eudy-ib xeon08-ib0
10.0.40.108 eudy-ipmi xeon08-ipmi0 xeon08-ipmi
'';
};
}

View File

@@ -1,8 +0,0 @@
{
# Connect to intranet git hosts via proxy
programs.ssh.extraConfig = ''
# Connect to BSC machines via hut proxy too
Host amdlogin1.bsc.es armlogin1.bsc.es hualogin1.bsc.es glogin1.bsc.es glogin2.bsc.es fpgalogin1.bsc.es
ProxyCommand nc -X connect -x hut:23080 %h %p
'';
}

View File

@@ -9,6 +9,7 @@
./cpufreq.nix
./fs.nix
./users.nix
../module/hut-substituter.nix
../module/debuginfod.nix
];

File diff suppressed because it is too large Load Diff

File diff suppressed because it is too large Load Diff

View File

@@ -4,9 +4,18 @@
imports = [
../common/base.nix
../common/xeon/console.nix
../module/amd-uprof.nix
../module/emulation.nix
../module/nvidia.nix
../module/slurm-client.nix
../module/hut-substituter.nix
./wireguard.nix
];
# Don't turn off on August as UPC has different dates.
# Fox works fine on power cuts.
systemd.timers.august-shutdown.enable = false;
# Select the this using the ID to avoid mismatches
boot.loader.grub.device = "/dev/disk/by-id/wwn-0x500a07514b0c1103";
@@ -14,7 +23,7 @@
swapDevices = lib.mkForce [];
boot.initrd.availableKernelModules = [ "xhci_pci" "ahci" "nvme" "usbhid" "usb_storage" "sd_mod" ];
boot.kernelModules = [ "kvm-amd" "amd_uncore" ];
boot.kernelModules = [ "kvm-amd" "amd_uncore" "amd_hsmp" ];
hardware.cpu.amd.updateMicrocode = lib.mkDefault config.hardware.enableRedistributableFirmware;
hardware.cpu.intel.updateMicrocode = lib.mkForce false;
@@ -22,14 +31,21 @@
# Use performance for benchmarks
powerManagement.cpuFreqGovernor = "performance";
services.amd-uprof.enable = true;
# Disable NUMA balancing
boot.kernel.sysctl."kernel.numa_balancing" = 0;
# Expose kernel addresses
boot.kernel.sysctl."kernel.kptr_restrict" = 0;
# Disable NMI watchdog to save one hw counter (for AMD uProf)
boot.kernel.sysctl."kernel.nmi_watchdog" = 0;
services.openssh.settings.X11Forwarding = true;
services.fail2ban.enable = true;
networking = {
timeServers = [ "ntp1.upc.edu" "ntp2.upc.edu" ];
hostName = "fox";
@@ -47,23 +63,20 @@
interfaces.enp1s0f0np0.useDHCP = true;
};
# Use hut for cache
nix.settings = {
extra-substituters = [ "https://jungle.bsc.es/cache" ];
extra-trusted-public-keys = [ "jungle.bsc.es:pEc7MlAT0HEwLQYPtpkPLwRsGf80ZI26aj29zMw/HH0=" ];
};
# Configure Nvidia driver to use with CUDA
hardware.nvidia.package = config.boot.kernelPackages.nvidiaPackages.production;
hardware.graphics.enable = true;
nixpkgs.config.allowUnfree = true;
nixpkgs.config.nvidia.acceptLicense = true;
services.xserver.videoDrivers = [ "nvidia" ];
# Recommended for new graphics cards
hardware.nvidia.open = true;
# Mount NVME disks
fileSystems."/nvme0" = { device = "/dev/disk/by-label/nvme0"; fsType = "ext4"; };
fileSystems."/nvme1" = { device = "/dev/disk/by-label/nvme1"; fsType = "ext4"; };
# Mount the NFS home
fileSystems."/nfs/home" = {
device = "10.106.0.30:/home";
fsType = "nfs";
options = [ "nfsvers=3" "rsize=1024" "wsize=1024" "cto" "nofail" ];
};
# Make a /nvme{0,1}/$USER directory for each user.
systemd.services.create-nvme-dirs = let
# Take only normal users in fox
@@ -80,4 +93,20 @@
wantedBy = [ "multi-user.target" ];
serviceConfig.ExecStart = script;
};
# Only allow SSH connections from users who have a SLURM allocation
# See: https://slurm.schedmd.com/pam_slurm_adopt.html
security.pam.services.sshd.rules.account.slurm = {
control = "required";
enable = true;
modulePath = "${pkgs.slurm}/lib/security/pam_slurm_adopt.so";
args = [ "log_level=debug5" ];
order = 999999; # Make it last one
};
# Disable systemd session (pam_systemd.so) as it will conflict with the
# pam_slurm_adopt.so module. What happens is that the shell is first adopted
# into the slurmstepd task and then into the systemd session, which is not
# what we want, otherwise it will linger even if all jobs are gone.
security.pam.services.sshd.startSession = lib.mkForce false;
}

53
m/fox/wireguard.nix Normal file
View File

@@ -0,0 +1,53 @@
{ config, ... }:
{
networking.firewall = {
allowedUDPPorts = [ 666 ];
};
age.secrets.wgFox.file = ../../secrets/wg-fox.age;
networking.wireguard.enable = true;
networking.wireguard.interfaces = {
# "wg0" is the network interface name. You can name the interface arbitrarily.
wg0 = {
# Determines the IP address and subnet of the server's end of the tunnel interface.
ips = [ "10.106.0.1/24" ];
# The port that WireGuard listens to. Must be accessible by the client.
listenPort = 666;
# Path to the private key file.
privateKeyFile = config.age.secrets.wgFox.path;
# Public key: VfMPBQLQTKeyXJSwv8wBhc6OV0j2qAxUpX3kLHunK2Y=
peers = [
# List of allowed peers.
{
name = "apex";
publicKey = "VwhcN8vSOzdJEotQTpmPHBC52x3Hbv1lkFIyKubrnUA=";
# List of IPs assigned to this peer within the tunnel subnet. Used to configure routing.
allowedIPs = [ "10.106.0.30/32" ];
}
{
name = "raccoon";
publicKey = "QUfnGXSMEgu2bviglsaSdCjidB51oEDBFpnSFcKGfDI=";
allowedIPs = [ "10.106.0.236/32" "192.168.0.0/16" "10.0.44.0/24" ];
}
];
};
};
networking.hosts = {
"10.106.0.30" = [ "apex" ];
"10.106.0.236" = [ "raccoon" ];
"10.0.44.4" = [ "tent" ];
};
networking.firewall = {
extraCommands = ''
# Accept slurm connections to slurmd from apex (via wireguard)
iptables -A nixos-fw -p tcp -i wg0 -s 10.106.0.30/32 -d 10.106.0.1/32 --dport 6818 -j nixos-fw-accept
'';
};
}

View File

@@ -3,160 +3,12 @@ modules:
prober: http
timeout: 5s
http:
proxy_url: "http://127.0.0.1:23080"
skip_resolve_phase_with_proxy: true
follow_redirects: true
valid_status_codes: [] # Defaults to 2xx
method: GET
http_with_proxy:
prober: http
http:
proxy_url: "http://127.0.0.1:3128"
skip_resolve_phase_with_proxy: true
http_with_proxy_and_headers:
prober: http
http:
proxy_url: "http://127.0.0.1:3128"
proxy_connect_header:
Proxy-Authorization:
- Bearer token
http_post_2xx:
prober: http
timeout: 5s
http:
method: POST
headers:
Content-Type: application/json
body: '{}'
http_post_body_file:
prober: http
timeout: 5s
http:
method: POST
body_file: "/files/body.txt"
http_basic_auth_example:
prober: http
timeout: 5s
http:
method: POST
headers:
Host: "login.example.com"
basic_auth:
username: "username"
password: "mysecret"
http_2xx_oauth_client_credentials:
prober: http
timeout: 5s
http:
valid_http_versions: ["HTTP/1.1", "HTTP/2"]
follow_redirects: true
preferred_ip_protocol: "ip4"
valid_status_codes:
- 200
- 201
oauth2:
client_id: "client_id"
client_secret: "client_secret"
token_url: "https://api.example.com/token"
endpoint_params:
grant_type: "client_credentials"
http_custom_ca_example:
prober: http
http:
valid_status_codes: [] # Defaults to 2xx
method: GET
tls_config:
ca_file: "/certs/my_cert.crt"
http_gzip:
prober: http
http:
method: GET
compression: gzip
http_gzip_with_accept_encoding:
prober: http
http:
method: GET
compression: gzip
headers:
Accept-Encoding: gzip
tls_connect:
prober: tcp
timeout: 5s
tcp:
tls: true
tcp_connect_example:
prober: tcp
timeout: 5s
imap_starttls:
prober: tcp
timeout: 5s
tcp:
query_response:
- expect: "OK.*STARTTLS"
- send: ". STARTTLS"
- expect: "OK"
- starttls: true
- send: ". capability"
- expect: "CAPABILITY IMAP4rev1"
smtp_starttls:
prober: tcp
timeout: 5s
tcp:
query_response:
- expect: "^220 ([^ ]+) ESMTP (.+)$"
- send: "EHLO prober\r"
- expect: "^250-STARTTLS"
- send: "STARTTLS\r"
- expect: "^220"
- starttls: true
- send: "EHLO prober\r"
- expect: "^250-AUTH"
- send: "QUIT\r"
irc_banner_example:
prober: tcp
timeout: 5s
tcp:
query_response:
- send: "NICK prober"
- send: "USER prober prober prober :prober"
- expect: "PING :([^ ]+)"
send: "PONG ${1}"
- expect: "^:[^ ]+ 001"
icmp:
prober: icmp
timeout: 5s
icmp:
preferred_ip_protocol: "ip4"
dns_udp_example:
prober: dns
timeout: 5s
dns:
query_name: "www.prometheus.io"
query_type: "A"
valid_rcodes:
- NOERROR
validate_answer_rrs:
fail_if_matches_regexp:
- ".*127.0.0.1"
fail_if_all_match_regexp:
- ".*127.0.0.1"
fail_if_not_matches_regexp:
- "www.prometheus.io.\t300\tIN\tA\t127.0.0.1"
fail_if_none_matches_regexp:
- "127.0.0.1"
validate_authority_rrs:
fail_if_matches_regexp:
- ".*127.0.0.1"
validate_additional_rrs:
fail_if_matches_regexp:
- ".*127.0.0.1"
dns_soa:
prober: dns
dns:
query_name: "prometheus.io"
query_type: "SOA"
dns_tcp_example:
prober: dns
dns:
transport_protocol: "tcp" # defaults to "udp"
preferred_ip_protocol: "ip4" # defaults to "ip6"
query_name: "www.prometheus.io"

View File

@@ -7,11 +7,9 @@
../module/ceph.nix
../module/debuginfod.nix
../module/emulation.nix
../module/slurm-client.nix
./gitlab-runner.nix
./monitoring.nix
./nfs.nix
./slurm-server.nix
./nix-serve.nix
./public-inbox.nix
./gitea.nix

View File

@@ -2,20 +2,10 @@
N=500
t_proj=$(timeout 5 ssh bsc015557@glogin2.bsc.es "timeout 3 command time -f %e touch /gpfs/projects/bsc15/bsc015557/gpfs.{1..$N} 2>&1; rm -f /gpfs/projects/bsc15/bsc015557/gpfs.{1..$N}")
t_scratch=$(timeout 5 ssh bsc015557@glogin2.bsc.es "timeout 3 command time -f %e touch /gpfs/scratch/bsc15/rodrigo/probe/gpfs.{1..$N} 2>&1; rm -f /gpfs/scratch/bsc15/rodrigo/probe/gpfs.{1..$N}")
t_home=$(timeout 5 ssh bsc015557@glogin2.bsc.es "timeout 3 command time -f %e touch /home/bsc/bsc015557/.gpfs/{1..$N} 2>&1; rm -f /home/bsc/bsc015557/.gpfs/{1..$N}")
t=$(timeout 5 ssh bsc015557@glogin2.bsc.es "timeout 3 command time -f %e touch /gpfs/projects/bsc15/bsc015557/gpfs.{1..$N} 2>&1; rm -f /gpfs/projects/bsc15/bsc015557/gpfs.{1..$N}")
if [ -z "$t_proj" ]; then
t_proj="5.00"
fi
if [ -z "$t_scratch" ]; then
t_scratch="5.00"
fi
if [ -z "$t_home" ]; then
t_home="5.00"
if [ -z "$t" ]; then
t="5.00"
fi
cat <<EOF
@@ -24,7 +14,5 @@ Content-Type: text/plain; version=0.0.4; charset=utf-8; escaping=values
# HELP gpfs_touch_latency Time to create $N files.
# TYPE gpfs_touch_latency gauge
gpfs_touch_latency{partition="projects"} $t_proj
gpfs_touch_latency{partition="home"} $t_home
gpfs_touch_latency{partition="scratch"} $t_scratch
gpfs_touch_latency $t
EOF

View File

@@ -267,14 +267,6 @@
}
];
}
{
job_name = "tent";
static_configs = [
{
targets = [ "127.0.0.1:29002" ]; # Node exporter
}
];
}
];
};
}

View File

@@ -2,10 +2,13 @@
let
website = pkgs.stdenv.mkDerivation {
name = "jungle-web";
src = theFlake;
src = pkgs.fetchgit {
url = "https://jungle.bsc.es/git/rarias/jungle-website.git";
rev = "739bf0175a7f05380fe7ad7023ff1d60db1710e1";
hash = "sha256-ea5DzhYTzZ9TmqD+x95rdNdLbxPnBluqlYH2NmBYmc4=";
};
buildInputs = [ pkgs.hugo ];
buildPhase = ''
cd web
rm -rf public/
hugo
'';

View File

@@ -1,7 +0,0 @@
{ ... }:
{
services.slurm = {
server.enable = true;
};
}

View File

@@ -4,7 +4,7 @@
- xeon03-ipmi
- xeon04-ipmi
- koro-ipmi
- xeon06-ipmi
- weasel-ipmi
- hut-ipmi
- eudy-ipmi
# Storage

View File

@@ -4,6 +4,7 @@
imports = [
../common/ssf.nix
../module/monitoring.nix
../module/hut-substituter.nix
];
boot.loader.grub.device = "/dev/disk/by-id/wwn-0x55cd2e414d53563a";

View File

@@ -6,7 +6,7 @@
switch-opa = { pos=41; size=1; };
# SSF login
ssfhead = { pos=39; size=2; label="SSFHEAD"; board="R2208WTTYSR"; contact="operations@bsc.es"; };
apex = { pos=39; size=2; label="SSFHEAD"; board="R2208WTTYSR"; contact="rodrigo.arias@bsc.es"; };
# Storage
bay = { pos=38; size=1; label="MDS01"; board="S2600WT2R"; sn="BQWL64850303"; contact="rodrigo.arias@bsc.es"; };
@@ -19,7 +19,7 @@
xeon03 = { pos=33; size=1; label="SSF-XEON03"; board="S2600WTTR"; sn="BQWL64750826"; contact="rodrigo.arias@bsc.es"; };
# Slot 34 empty
koro = { pos=31; size=1; label="SSF-XEON05"; board="S2600WTTR"; sn="BQWL64954293"; contact="rodrigo.arias@bsc.es"; };
xeon06 = { pos=30; size=1; label="SSF-XEON06"; board="S2600WTTR"; sn="BQWL64750846"; contact="antoni.navarro@bsc.es"; };
weasel = { pos=30; size=1; label="SSF-XEON06"; board="S2600WTTR"; sn="BQWL64750846"; contact="antoni.navarro@bsc.es"; };
hut = { pos=29; size=1; label="SSF-XEON07"; board="S2600WTTR"; sn="BQWL64751184"; contact="rodrigo.arias@bsc.es"; };
eudy = { pos=28; size=1; label="SSF-XEON08"; board="S2600WTTR"; sn="BQWL64756586"; contact="aleix.rocanonell@bsc.es"; };

49
m/module/amd-uprof.nix Normal file
View File

@@ -0,0 +1,49 @@
{ config, lib, pkgs, ... }:
{
options = {
services.amd-uprof = {
enable = lib.mkOption {
type = lib.types.bool;
default = false;
description = "Whether to enable AMD uProf.";
};
};
};
# Only setup amd-uprof if enabled
config = lib.mkIf config.services.amd-uprof.enable {
# First make sure that we add the module to the list of available modules
# in the kernel matching the same kernel version of this configuration.
boot.extraModulePackages = with config.boot.kernelPackages; [ amd-uprof-driver ];
boot.kernelModules = [ "AMDPowerProfiler" ];
# Make the userspace tools available in $PATH.
environment.systemPackages = with pkgs; [ amd-uprof ];
# The AMDPowerProfiler module doesn't create the /dev device nor it emits
# any uevents, so we cannot use udev rules to automatically create the
# device. Instead, we run a systemd unit that does it after loading the
# modules.
systemd.services.amd-uprof-device = {
description = "Create /dev/AMDPowerProfiler device";
after = [ "systemd-modules-load.service" ];
wantedBy = [ "multi-user.target" ];
unitConfig.ConditionPathExists = [
"/proc/AMDPowerProfiler/device"
"!/dev/AMDPowerProfiler"
];
serviceConfig = {
Type = "oneshot";
RemainAfterExit = true;
ExecStart = pkgs.writeShellScript "add-amd-uprof-dev.sh" ''
mknod /dev/AMDPowerProfiler -m 666 c $(< /proc/AMDPowerProfiler/device) 0
'';
ExecStop = pkgs.writeShellScript "remove-amd-uprof-dev.sh" ''
rm -f /dev/AMDPowerProfiler
'';
};
};
};
}

View File

@@ -6,5 +6,8 @@
{
extra-substituters = [ "http://hut/cache" ];
extra-trusted-public-keys = [ "jungle.bsc.es:pEc7MlAT0HEwLQYPtpkPLwRsGf80ZI26aj29zMw/HH0=" ];
# Set a low timeout in case hut is down
connect-timeout = 3; # seconds
};
}

20
m/module/nvidia.nix Normal file
View File

@@ -0,0 +1,20 @@
{ lib, config, pkgs, ... }:
{
# Configure Nvidia driver to use with CUDA
hardware.nvidia.package = config.boot.kernelPackages.nvidiaPackages.production;
hardware.nvidia.open = lib.mkDefault (builtins.abort "hardware.nvidia.open not set");
hardware.graphics.enable = true;
nixpkgs.config.nvidia.acceptLicense = true;
services.xserver.videoDrivers = [ "nvidia" ];
# enable support for derivations which require nvidia-gpu to be available
# > requiredSystemFeatures = [ "cuda" ];
programs.nix-required-mounts.enable = true;
programs.nix-required-mounts.presets.nvidia-gpu.enable = true;
# They forgot to add the symlink
programs.nix-required-mounts.allowedPatterns.nvidia-gpu.paths = [
config.systemd.tmpfiles.settings.graphics-driver."/run/opengl-driver"."L+".argument
];
environment.systemPackages = [ pkgs.cudainfo ];
}

33
m/module/power-policy.nix Normal file
View File

@@ -0,0 +1,33 @@
{ config, lib, pkgs, ... }:
with lib;
let
cfg = config.power.policy;
in
{
options = {
power.policy = mkOption {
type = types.nullOr (types.enum [ "always-on" "previous" "always-off" ]);
default = null;
description = "Set power policy to use via IPMI.";
};
};
config = mkIf (cfg != null) {
systemd.services."power-policy" = {
description = "Set power policy to use via IPMI";
wantedBy = [ "multi-user.target" ];
unitConfig = {
StartLimitBurst = "10";
StartLimitIntervalSec = "10m";
};
serviceConfig = {
ExecStart = "${pkgs.ipmitool}/bin/ipmitool chassis policy ${cfg}";
Type = "oneshot";
Restart = "on-failure";
RestartSec = "5s";
};
};
};
}

View File

@@ -1,33 +1,10 @@
{ config, pkgs, lib, ... }:
{ lib, ... }:
let
suspendProgram = pkgs.writeScript "suspend.sh" ''
#!/usr/bin/env bash
exec 1>>/var/log/power_save.log 2>>/var/log/power_save.log
set -x
export "PATH=/run/current-system/sw/bin:$PATH"
echo "$(date) Suspend invoked $0 $*" >> /var/log/power_save.log
hosts=$(scontrol show hostnames $1)
for host in $hosts; do
echo Shutting down host: $host
ipmitool -I lanplus -H ''${host}-ipmi -P "" -U "" chassis power off
done
'';
{
imports = [
./slurm-common.nix
];
resumeProgram = pkgs.writeScript "resume.sh" ''
#!/usr/bin/env bash
exec 1>>/var/log/power_save.log 2>>/var/log/power_save.log
set -x
export "PATH=/run/current-system/sw/bin:$PATH"
echo "$(date) Suspend invoked $0 $*" >> /var/log/power_save.log
hosts=$(scontrol show hostnames $1)
for host in $hosts; do
echo Starting host: $host
ipmitool -I lanplus -H ''${host}-ipmi -P "" -U "" chassis power on
done
'';
in {
systemd.services.slurmd.serviceConfig = {
# Kill all processes in the control group on stop/restart. This will kill
# all the jobs running, so ensure that we only upgrade when the nodes are
@@ -35,92 +12,13 @@ in {
# https://github.com/NixOS/nixpkgs/commit/ae93ed0f0d4e7be0a286d1fca86446318c0c6ffb
# https://bugs.schedmd.com/show_bug.cgi?id=2095#c24
KillMode = lib.mkForce "control-group";
# If slurmd fails to contact the control server it will fail, causing the
# node to remain out of service until manually restarted. Always try to
# restart it.
Restart = "always";
RestartSec = "30s";
};
services.slurm = {
client.enable = true;
controlMachine = "hut";
clusterName = "jungle";
nodeName = [
"owl[1,2] Sockets=2 CoresPerSocket=14 ThreadsPerCore=2 Feature=owl"
"hut Sockets=2 CoresPerSocket=14 ThreadsPerCore=2"
];
partitionName = [
"owl Nodes=owl[1-2] Default=YES DefaultTime=01:00:00 MaxTime=INFINITE State=UP"
];
# See slurm.conf(5) for more details about these options.
extraConfig = ''
# Use PMIx for MPI by default. It works okay with MPICH and OpenMPI, but
# not with Intel MPI. For that use the compatibility shim libpmi.so
# setting I_MPI_PMI_LIBRARY=$pmix/lib/libpmi.so while maintaining the PMIx
# library in SLURM (--mpi=pmix). See more details here:
# https://pm.bsc.es/gitlab/rarias/jungle/-/issues/16
MpiDefault=pmix
# When a node reboots return that node to the slurm queue as soon as it
# becomes operative again.
ReturnToService=2
# Track all processes by using a cgroup
ProctrackType=proctrack/cgroup
# Enable task/affinity to allow the jobs to run in a specified subset of
# the resources. Use the task/cgroup plugin to enable process containment.
TaskPlugin=task/affinity,task/cgroup
# Power off unused nodes until they are requested
SuspendProgram=${suspendProgram}
SuspendTimeout=60
ResumeProgram=${resumeProgram}
ResumeTimeout=300
SuspendExcNodes=hut
# Turn the nodes off after 1 hour of inactivity
SuspendTime=3600
# Reduce port range so we can allow only this range in the firewall
SrunPortRange=60000-61000
# Use cores as consumable resources. In SLURM terms, a core may have
# multiple hardware threads (or CPUs).
SelectType=select/cons_tres
# Ignore memory constraints and only use unused cores to share a node with
# other jobs.
SelectTypeParameters=CR_Core
# Required for pam_slurm_adopt, see https://slurm.schedmd.com/pam_slurm_adopt.html
# This sets up the "extern" step into which ssh-launched processes will be
# adopted. Alloc runs the prolog at job allocation (salloc) rather than
# when a task runs (srun) so we can ssh early.
PrologFlags=Alloc,Contain,X11
# LaunchParameters=ulimit_pam_adopt will set RLIMIT_RSS in processes
# adopted by the external step, similar to tasks running in regular steps
# LaunchParameters=ulimit_pam_adopt
SlurmdDebug=debug5
#DebugFlags=Protocol,Cgroup
'';
extraCgroupConfig = ''
CgroupPlugin=cgroup/v2
#ConstrainCores=yes
'';
};
# Place the slurm config in /etc as this will be required by PAM
environment.etc.slurm.source = config.services.slurm.etcSlurm;
age.secrets.mungeKey = {
file = ../../secrets/munge-key.age;
owner = "munge";
group = "munge";
};
services.munge = {
enable = true;
password = config.age.secrets.mungeKey.path;
};
services.slurm.client.enable = true;
}

115
m/module/slurm-common.nix Normal file
View File

@@ -0,0 +1,115 @@
{ config, pkgs, ... }:
let
suspendProgram = pkgs.writeShellScript "suspend.sh" ''
exec 1>>/var/log/power_save.log 2>>/var/log/power_save.log
set -x
export "PATH=/run/current-system/sw/bin:$PATH"
echo "$(date) Suspend invoked $0 $*" >> /var/log/power_save.log
hosts=$(scontrol show hostnames $1)
for host in $hosts; do
echo Shutting down host: $host
ipmitool -I lanplus -H ''${host}-ipmi -P "" -U "" chassis power off
done
'';
resumeProgram = pkgs.writeShellScript "resume.sh" ''
exec 1>>/var/log/power_save.log 2>>/var/log/power_save.log
set -x
export "PATH=/run/current-system/sw/bin:$PATH"
echo "$(date) Suspend invoked $0 $*" >> /var/log/power_save.log
hosts=$(scontrol show hostnames $1)
for host in $hosts; do
echo Starting host: $host
ipmitool -I lanplus -H ''${host}-ipmi -P "" -U "" chassis power on
done
'';
in {
services.slurm = {
controlMachine = "apex";
clusterName = "jungle";
nodeName = [
"owl[1,2] Sockets=2 CoresPerSocket=14 ThreadsPerCore=2 Feature=owl"
"fox Sockets=8 CoresPerSocket=24 ThreadsPerCore=1"
];
partitionName = [
"owl Nodes=owl[1-2] Default=YES DefaultTime=01:00:00 MaxTime=INFINITE State=UP"
"fox Nodes=fox Default=NO DefaultTime=01:00:00 MaxTime=INFINITE State=UP"
];
# See slurm.conf(5) for more details about these options.
extraConfig = ''
# Use PMIx for MPI by default. It works okay with MPICH and OpenMPI, but
# not with Intel MPI. For that use the compatibility shim libpmi.so
# setting I_MPI_PMI_LIBRARY=$pmix/lib/libpmi.so while maintaining the PMIx
# library in SLURM (--mpi=pmix). See more details here:
# https://pm.bsc.es/gitlab/rarias/jungle/-/issues/16
MpiDefault=pmix
# When a node reboots return that node to the slurm queue as soon as it
# becomes operative again.
ReturnToService=2
# Track all processes by using a cgroup
ProctrackType=proctrack/cgroup
# Enable task/affinity to allow the jobs to run in a specified subset of
# the resources. Use the task/cgroup plugin to enable process containment.
TaskPlugin=task/affinity,task/cgroup
# Power off unused nodes until they are requested
SuspendProgram=${suspendProgram}
SuspendTimeout=60
ResumeProgram=${resumeProgram}
ResumeTimeout=300
SuspendExcNodes=fox
# Turn the nodes off after 1 hour of inactivity
SuspendTime=3600
# Reduce port range so we can allow only this range in the firewall
SrunPortRange=60000-61000
# Use cores as consumable resources. In SLURM terms, a core may have
# multiple hardware threads (or CPUs).
SelectType=select/cons_tres
# Ignore memory constraints and only use unused cores to share a node with
# other jobs.
SelectTypeParameters=CR_Core
# Required for pam_slurm_adopt, see https://slurm.schedmd.com/pam_slurm_adopt.html
# This sets up the "extern" step into which ssh-launched processes will be
# adopted. Alloc runs the prolog at job allocation (salloc) rather than
# when a task runs (srun) so we can ssh early.
PrologFlags=Alloc,Contain,X11
# LaunchParameters=ulimit_pam_adopt will set RLIMIT_RSS in processes
# adopted by the external step, similar to tasks running in regular steps
# LaunchParameters=ulimit_pam_adopt
SlurmdDebug=debug5
#DebugFlags=Protocol,Cgroup
'';
extraCgroupConfig = ''
CgroupPlugin=cgroup/v2
#ConstrainCores=yes
'';
};
# Place the slurm config in /etc as this will be required by PAM
environment.etc.slurm.source = config.services.slurm.etcSlurm;
age.secrets.mungeKey = {
file = ../../secrets/munge-key.age;
owner = "munge";
group = "munge";
};
services.munge = {
enable = true;
password = config.age.secrets.mungeKey.path;
};
}

23
m/module/slurm-server.nix Normal file
View File

@@ -0,0 +1,23 @@
{ ... }:
{
imports = [
./slurm-common.nix
];
services.slurm.server.enable = true;
networking.firewall = {
extraCommands = ''
# Accept slurm connections to controller from compute nodes
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 --dport 6817 -j nixos-fw-accept
# Accept slurm connections from compute nodes for srun
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 --dport 60000:61000 -j nixos-fw-accept
# Accept slurm connections to controller from fox (via wireguard)
iptables -A nixos-fw -p tcp -i wg0 -s 10.106.0.1/32 --dport 6817 -j nixos-fw-accept
# Accept slurm connections from fox for srun (via wireguard)
iptables -A nixos-fw -p tcp -i wg0 -s 10.106.0.1/32 --dport 60000:61000 -j nixos-fw-accept
'';
};
}

View File

@@ -1,9 +0,0 @@
{
programs.ssh.extraConfig = ''
Host ssfhead
HostName ssflogin.bsc.es
Host hut
ProxyJump ssfhead
HostName xeon07
'';
}

View File

@@ -3,10 +3,13 @@
{
imports = [
../common/base.nix
../common/ssf/hosts.nix
../module/emulation.nix
../module/debuginfod.nix
../module/ssh-hut-extern.nix
../module/nvidia.nix
../eudy/kernel/perf.nix
./wireguard.nix
../module/hut-substituter.nix
];
# Don't install Grub on the disk yet
@@ -38,26 +41,21 @@
};
hosts = {
"10.0.44.4" = [ "tent" ];
"84.88.53.236" = [ "apex" ];
};
};
nix.settings = {
extra-substituters = [ "https://jungle.bsc.es/cache" ];
extra-trusted-public-keys = [ "jungle.bsc.es:pEc7MlAT0HEwLQYPtpkPLwRsGf80ZI26aj29zMw/HH0=" ];
# Mount the NFS home
fileSystems."/nfs/home" = {
device = "10.106.0.30:/home";
fsType = "nfs";
options = [ "nfsvers=3" "rsize=1024" "wsize=1024" "cto" "nofail" ];
};
# Enable performance governor
powerManagement.cpuFreqGovernor = "performance";
# Configure Nvidia driver to use with CUDA
hardware.nvidia.package = config.boot.kernelPackages.nvidiaPackages.production;
hardware.graphics.enable = true;
nixpkgs.config.allowUnfree = true;
nixpkgs.config.nvidia.acceptLicense = true;
services.xserver.videoDrivers = [ "nvidia" ];
# Disable garbage collection for now
nix.gc.automatic = lib.mkForce false;
hardware.nvidia.open = false; # Maxwell is older than Turing architecture
services.openssh.settings.X11Forwarding = true;

48
m/raccoon/wireguard.nix Normal file
View File

@@ -0,0 +1,48 @@
{ config, pkgs, ... }:
{
networking.nat = {
enable = true;
enableIPv6 = false;
externalInterface = "eno0";
internalInterfaces = [ "wg0" ];
};
networking.firewall = {
allowedUDPPorts = [ 666 ];
};
age.secrets.wgRaccoon.file = ../../secrets/wg-raccoon.age;
# Enable WireGuard
networking.wireguard.enable = true;
networking.wireguard.interfaces = {
wg0 = {
ips = [ "10.106.0.236/24" ];
listenPort = 666;
privateKeyFile = config.age.secrets.wgRaccoon.path;
# Public key: QUfnGXSMEgu2bviglsaSdCjidB51oEDBFpnSFcKGfDI=
peers = [
{
name = "fox";
publicKey = "VfMPBQLQTKeyXJSwv8wBhc6OV0j2qAxUpX3kLHunK2Y=";
allowedIPs = [ "10.106.0.1/32" ];
endpoint = "fox.ac.upc.edu:666";
persistentKeepalive = 25;
}
{
name = "apex";
publicKey = "VwhcN8vSOzdJEotQTpmPHBC52x3Hbv1lkFIyKubrnUA=";
allowedIPs = [ "10.106.0.30/32" "10.0.40.0/24" ];
endpoint = "ssfhead.bsc.es:666";
persistentKeepalive = 25;
}
];
};
};
networking.hosts = {
"10.106.0.1" = [ "fox.wg" ];
"10.106.0.30" = [ "apex.wg" ];
};
}

View File

@@ -3,9 +3,9 @@
{
imports = [
../common/xeon.nix
../common/ssf/hosts.nix
../module/emulation.nix
../module/debuginfod.nix
../module/ssh-hut-extern.nix
./monitoring.nix
./nginx.nix
./nix-serve.nix
@@ -15,6 +15,7 @@
../hut/msmtp.nix
../module/p.nix
../module/vpn-dac.nix
../module/hut-substituter.nix
];
# Select the this using the ID to avoid mismatches
@@ -33,6 +34,10 @@
nameservers = [ "84.88.52.35" "84.88.52.36" ];
search = [ "bsc.es" "ac.upc.edu" ];
defaultGateway = "10.0.44.1";
hosts = {
"84.88.53.236" = [ "apex" ];
"10.0.44.1" = [ "raccoon" ];
};
};
services.p.enable = true;

View File

@@ -2,10 +2,13 @@
let
website = pkgs.stdenv.mkDerivation {
name = "jungle-web";
src = theFlake;
src = pkgs.fetchgit {
url = "https://jungle.bsc.es/git/rarias/jungle-website.git";
rev = "739bf0175a7f05380fe7ad7023ff1d60db1710e1";
hash = "sha256-ea5DzhYTzZ9TmqD+x95rdNdLbxPnBluqlYH2NmBYmc4=";
};
buildInputs = [ pkgs.hugo ];
buildPhase = ''
cd web
rm -rf public/
hugo
'';
@@ -67,6 +70,9 @@ in
location /p/ {
alias /var/lib/p/;
}
location /pub/ {
alias /vault/pub/;
}
'';
};
};

View File

@@ -0,0 +1,33 @@
{ lib, ... }:
{
imports = [
../common/ssf.nix
../module/hut-substituter.nix
];
# Select this using the ID to avoid mismatches
boot.loader.grub.device = "/dev/disk/by-id/wwn-0x55cd2e414d5356ca";
# No swap, there is plenty of RAM
swapDevices = lib.mkForce [];
# Users with sudo access
users.groups.wheel.members = [ "abonerib" "anavarro" ];
# Run julia installed with juliaup using julia's own libraries:
# NIX_LD_LIBRARY_PATH=~/.julia/juliaup/${VERS}/lib/julia ~/.juliaup/bin/julia
programs.nix-ld.enable = true;
networking = {
hostName = "weasel";
interfaces.eno1.ipv4.addresses = [ {
address = "10.0.40.6";
prefixLength = 24;
} ];
interfaces.ibp5s0.ipv4.addresses = [ {
address = "10.0.42.6";
prefixLength = 24;
} ];
};
}

View File

@@ -0,0 +1,89 @@
{ stdenv
, lib
, curl
, cacert
, runCommandLocal
, autoPatchelfHook
, elfutils
, glib
, libGL
, ncurses5
, xorg
, zlib
, libxkbcommon
, freetype
, fontconfig
, libGLU
, dbus
, rocmPackages
, libxcrypt-legacy
, numactl
, radare2
}:
let
version = "5.1.701";
tarball = "AMDuProf_Linux_x64_${version}.tar.bz2";
# NOTE: Remember to update the radare2 patch below if AMDuProfPcm changes.
uprofSrc = runCommandLocal tarball {
nativeBuildInputs = [ curl ];
outputHash = "sha256-j9gxcBcIg6Zhc5FglUXf/VV9bKSo+PAKeootbN7ggYk=";
SSL_CERT_FILE="${cacert}/etc/ssl/certs/ca-bundle.crt";
} ''
curl \
-o $out \
'https://download.amd.com/developer/eula/uprof/uprof-5-1/${tarball}' \
-H 'User-Agent: Mozilla/5.0 (X11; Linux x86_64; rv:139.0) Gecko/20100101 Firefox/139.0' \
-H 'Accept: text/html,application/xhtml+xml,application/xml;q=0.9,*/*;q=0.8' \
-H 'Accept-Language: en-US,en;q=0.5' \
-H 'Accept-Encoding: gzip, deflate, br, zstd' \
-H 'Referer: https://www.amd.com/' 2>&1 | tr '\r' '\n'
'';
in
stdenv.mkDerivation {
pname = "AMD-uProf";
inherit version;
src = uprofSrc;
dontStrip = true;
phases = [ "installPhase" "fixupPhase" ];
nativeBuildInputs = [ autoPatchelfHook radare2 ];
buildInputs = [
stdenv.cc.cc.lib
ncurses5
elfutils
glib
libGL
libGLU
libxcrypt-legacy
xorg.libX11
xorg.libXext
xorg.libXi
xorg.libXmu
xorg.libxcb
xorg.xcbutilwm
xorg.xcbutilrenderutil
xorg.xcbutilkeysyms
xorg.xcbutilimage
fontconfig.lib
libxkbcommon
zlib
freetype
dbus
rocmPackages.rocprofiler
numactl
];
installPhase = ''
set -x
mkdir -p $out
tar -x -v -C $out --strip-components=1 -f $src
rm $out/bin/AMDPowerProfilerDriverSource.tar.gz
patchelf --replace-needed libroctracer64.so.1 libroctracer64.so $out/bin/ProfileAgents/x64/libAMDGpuAgent.so
patchelf --add-needed libcrypt.so.1 --add-needed libstdc++.so.6 $out/bin/AMDuProfSys
echo "16334a51fcc48668307ad94e20482ca4 $out/bin/AMDuProfPcm" | md5sum -c -
radare2 -w -q -i ${./libnuma.r2} $out/bin/AMDuProfPcm
patchelf --add-needed libnuma.so $out/bin/AMDuProfPcm
set +x
'';
}

33
pkgs/amd-uprof/driver.nix Normal file
View File

@@ -0,0 +1,33 @@
{ stdenv
, lib
, amd-uprof
, kernel
, runCommandLocal
}:
let
version = amd-uprof.version;
tarball = amd-uprof.src;
in stdenv.mkDerivation {
pname = "AMDPowerProfilerDriver";
inherit version;
src = runCommandLocal "AMDPowerProfilerDriverSource.tar.gz" { } ''
set -x
tar -x -f ${tarball} AMDuProf_Linux_x64_${version}/bin/AMDPowerProfilerDriverSource.tar.gz
mv AMDuProf_Linux_x64_${version}/bin/AMDPowerProfilerDriverSource.tar.gz $out
set +x
'';
hardeningDisable = [ "pic" "format" ];
nativeBuildInputs = kernel.moduleBuildDependencies;
patches = [ ./makefile.patch ./hrtimer.patch ];
makeFlags = [
"KERNEL_VERSION=${kernel.modDirVersion}"
"KERNEL_DIR=${kernel.dev}/lib/modules/${kernel.modDirVersion}/build"
"INSTALL_MOD_PATH=$(out)"
];
meta = {
description = "AMD Power Profiler Driver";
homepage = "https://www.amd.com/es/developer/uprof.html";
platforms = lib.platforms.linux;
};
}

View File

@@ -0,0 +1,31 @@
--- a/src/PmcTimerConfig.c 2025-09-04 12:17:16.771707049 +0200
+++ b/src/PmcTimerConfig.c 2025-09-04 12:17:04.878515468 +0200
@@ -99,7 +99,7 @@ static void PmcInitTimer(void* pInfo)
DRVPRINT("pTimerConfig(%p)", pTimerConfig);
- hrtimer_init(&pTimerConfig->m_hrTimer, CLOCK_MONOTONIC, HRTIMER_MODE_REL_PINNED);
+ hrtimer_setup(&pTimerConfig->m_hrTimer, PmcTimerCallback, CLOCK_MONOTONIC, HRTIMER_MODE_REL_PINNED);
}
int PmcSetupTimer(ClientContext* pClientCtx)
@@ -157,7 +157,6 @@ int PmcSetupTimer(ClientContext* pClient
{
/* Interval in ms */
pTimerConfig->m_time = ktime_set(interval / 1000, interval * 1000000);
- pTimerConfig->m_hrTimer.function = PmcTimerCallback;
DRVPRINT("retVal(%d) m_time(%lld)", retVal, (long long int) pTimerConfig->m_time);
}
--- a/src/PwrProfTimer.c 2025-09-04 12:18:08.750544327 +0200
+++ b/src/PwrProfTimer.c 2025-09-04 12:18:28.557863382 +0200
@@ -573,8 +573,7 @@ void InitHrTimer(uint32 cpu)
pCoreClientData = &per_cpu(g_coreClientData, cpu);
// initialize HR timer
- hrtimer_init(&pCoreClientData->m_hrTimer, CLOCK_MONOTONIC, HRTIMER_MODE_REL_PINNED);
- pCoreClientData->m_hrTimer.function = &HrTimerCallback;
+ hrtimer_setup(&pCoreClientData->m_hrTimer, &HrTimerCallback, CLOCK_MONOTONIC, HRTIMER_MODE_REL_PINNED);
return;
} // InitHrTimer

10
pkgs/amd-uprof/libnuma.r2 Normal file
View File

@@ -0,0 +1,10 @@
# Patch arguments to call sym std::string::find(char const*, unsigned long, unsigned long)
# so it matches NixOS:
#
# Change OS name to NixOS
wz NixOS @ 0x00550a43
# And set the length to 5 characters
wa mov ecx, 5 @0x00517930
#
# Then change the argument to dlopen() so it only uses libnuma.so
wz libnuma.so @ 0x00562940

View File

@@ -0,0 +1,66 @@
--- a/Makefile 2025-06-19 20:36:49.346693267 +0200
+++ b/Makefile 2025-06-19 20:42:29.778088660 +0200
@@ -27,7 +27,7 @@ MODULE_VERSION=$(shell cat AMDPowerProfi
MODULE_NAME_KO=$(MODULE_NAME).ko
# check is module inserted
-MODPROBE_OUTPUT=$(shell lsmod | grep $(MODULE_NAME))
+#MODPROBE_OUTPUT=$(shell lsmod | grep $(MODULE_NAME))
# check pcore dkms status
PCORE_DKMS_STATUS=$(shell dkms status | grep $(MODULE_NAME) | grep $(MODULE_VERSION))
@@ -50,7 +50,7 @@ endif
# “-Wno-missing-attributes” is added for GCC version >= 9.0 and kernel version <= 5.00
G_VERSION=9
K_VERSION=5
-KERNEL_MAJOR_VERSION=$(shell uname -r | cut -f1 -d.)
+KERNEL_MAJOR_VERSION=$(shell echo "$(KERNEL_VERSION)" | cut -f1 -d.)
GCCVERSION = $(shell gcc -dumpversion | cut -f1 -d.)
ifeq ($(G_VERSION),$(firstword $(sort $(GCCVERSION) $(G_VERSION))))
ifeq ($(K_VERSION),$(lastword $(sort $(KERNEL_MAJOR_VERSION) $(K_VERSION))))
@@ -66,17 +66,7 @@ ${MODULE_NAME}-objs := src/PmcDataBuffe
# make
all:
- @chmod a+x ./AMDPPcert.sh
- @./AMDPPcert.sh 0 1; echo $$? > $(PWD)/sign_status;
- @SIGSTATUS1=`cat $(PWD)/sign_status | tr -d '\n'`; \
- if [ $$SIGSTATUS1 -eq 1 ]; then \
- exit 1; \
- fi
- @make -C /lib/modules/$(KERNEL_VERSION)/build M=$(PWD) $(MAKE_OPTS) EXTRA_CFLAGS="$(EXTRA_CFLAGS)" modules
- @SIGSTATUS3=`cat $(PWD)/sign_status | tr -d '\n'`; \
- if [ $$SIGSTATUS3 -eq 0 ]; then \
- ./AMDPPcert.sh 1 $(MODULE_NAME_KO); \
- fi
+ make -C $(KERNEL_DIR) M=$(PWD) $(MAKE_OPTS) CFLAGS_MODULE="$(EXTRA_CFLAGS)" modules
# make clean
clean:
@@ -84,23 +74,9 @@ clean:
# make install
install:
- @mkdir -p /lib/modules/`uname -r`/kernel/drivers/extra
- @rm -f /lib/modules/`uname -r`/kernel/drivers/extra/$(MODULE_NAME_KO)
- @cp $(MODULE_NAME_KO) /lib/modules/`uname -r`/kernel/drivers/extra/
- @depmod -a
- @if [ ! -z "$(MODPROBE_OUTPUT)" ]; then \
- echo "Uninstalling AMDPowerProfiler Linux kernel module.";\
- rmmod $(MODULE_NAME);\
- fi
- @modprobe $(MODULE_NAME) 2> $(PWD)/sign_status1; \
- cat $(PWD)/sign_status1 | grep "Key was rejected by service"; \
- echo $$? > $(PWD)/sign_status; SIGSTATUS1=`cat $(PWD)/sign_status | tr -d '\n'`; \
- if [ $$SIGSTATUS1 -eq 0 ]; then \
- echo "ERROR: Secure Boot enabled, correct key is not yet enrolled in BIOS key table"; \
- exit 1; \
- else \
- cat $(PWD)/sign_status1; \
- fi
+ mkdir -p $(INSTALL_MOD_PATH)/lib/modules/$(KERNEL_VERSION)/kernel/drivers/extra/
+ cp -a $(MODULE_NAME_KO) $(INSTALL_MOD_PATH)/lib/modules/$(KERNEL_VERSION)/kernel/drivers/extra/
+
# make dkms
dkms:
@chmod a+x ./AMDPPcert.sh

12
pkgs/cudainfo/Makefile Normal file
View File

@@ -0,0 +1,12 @@
HOSTCXX ?= g++
NVCC := nvcc -ccbin $(HOSTCXX)
CXXFLAGS := -m64
# Target rules
all: cudainfo
cudainfo: cudainfo.cpp
$(NVCC) $(CXXFLAGS) -o $@ $<
clean:
rm -f cudainfo cudainfo.o

600
pkgs/cudainfo/cudainfo.cpp Normal file
View File

@@ -0,0 +1,600 @@
/*
* Copyright 1993-2015 NVIDIA Corporation. All rights reserved.
*
* Please refer to the NVIDIA end user license agreement (EULA) associated
* with this source code for terms and conditions that govern your use of
* this software. Any use, reproduction, disclosure, or distribution of
* this software and related documentation outside the terms of the EULA
* is strictly prohibited.
*
*/
/* This sample queries the properties of the CUDA devices present in the system via CUDA Runtime API. */
// Shared Utilities (QA Testing)
// std::system includes
#include <memory>
#include <iostream>
#include <cuda_runtime.h>
// This will output the proper CUDA error strings in the event that a CUDA host call returns an error
#define checkCudaErrors(val) check ( (val), #val, __FILE__, __LINE__ )
// CUDA Runtime error messages
#ifdef __DRIVER_TYPES_H__
static const char *_cudaGetErrorEnum(cudaError_t error)
{
switch (error)
{
case cudaSuccess:
return "cudaSuccess";
case cudaErrorMissingConfiguration:
return "cudaErrorMissingConfiguration";
case cudaErrorMemoryAllocation:
return "cudaErrorMemoryAllocation";
case cudaErrorInitializationError:
return "cudaErrorInitializationError";
case cudaErrorLaunchFailure:
return "cudaErrorLaunchFailure";
case cudaErrorPriorLaunchFailure:
return "cudaErrorPriorLaunchFailure";
case cudaErrorLaunchTimeout:
return "cudaErrorLaunchTimeout";
case cudaErrorLaunchOutOfResources:
return "cudaErrorLaunchOutOfResources";
case cudaErrorInvalidDeviceFunction:
return "cudaErrorInvalidDeviceFunction";
case cudaErrorInvalidConfiguration:
return "cudaErrorInvalidConfiguration";
case cudaErrorInvalidDevice:
return "cudaErrorInvalidDevice";
case cudaErrorInvalidValue:
return "cudaErrorInvalidValue";
case cudaErrorInvalidPitchValue:
return "cudaErrorInvalidPitchValue";
case cudaErrorInvalidSymbol:
return "cudaErrorInvalidSymbol";
case cudaErrorMapBufferObjectFailed:
return "cudaErrorMapBufferObjectFailed";
case cudaErrorUnmapBufferObjectFailed:
return "cudaErrorUnmapBufferObjectFailed";
case cudaErrorInvalidHostPointer:
return "cudaErrorInvalidHostPointer";
case cudaErrorInvalidDevicePointer:
return "cudaErrorInvalidDevicePointer";
case cudaErrorInvalidTexture:
return "cudaErrorInvalidTexture";
case cudaErrorInvalidTextureBinding:
return "cudaErrorInvalidTextureBinding";
case cudaErrorInvalidChannelDescriptor:
return "cudaErrorInvalidChannelDescriptor";
case cudaErrorInvalidMemcpyDirection:
return "cudaErrorInvalidMemcpyDirection";
case cudaErrorAddressOfConstant:
return "cudaErrorAddressOfConstant";
case cudaErrorTextureFetchFailed:
return "cudaErrorTextureFetchFailed";
case cudaErrorTextureNotBound:
return "cudaErrorTextureNotBound";
case cudaErrorSynchronizationError:
return "cudaErrorSynchronizationError";
case cudaErrorInvalidFilterSetting:
return "cudaErrorInvalidFilterSetting";
case cudaErrorInvalidNormSetting:
return "cudaErrorInvalidNormSetting";
case cudaErrorMixedDeviceExecution:
return "cudaErrorMixedDeviceExecution";
case cudaErrorCudartUnloading:
return "cudaErrorCudartUnloading";
case cudaErrorUnknown:
return "cudaErrorUnknown";
case cudaErrorNotYetImplemented:
return "cudaErrorNotYetImplemented";
case cudaErrorMemoryValueTooLarge:
return "cudaErrorMemoryValueTooLarge";
case cudaErrorInvalidResourceHandle:
return "cudaErrorInvalidResourceHandle";
case cudaErrorNotReady:
return "cudaErrorNotReady";
case cudaErrorInsufficientDriver:
return "cudaErrorInsufficientDriver";
case cudaErrorSetOnActiveProcess:
return "cudaErrorSetOnActiveProcess";
case cudaErrorInvalidSurface:
return "cudaErrorInvalidSurface";
case cudaErrorNoDevice:
return "cudaErrorNoDevice";
case cudaErrorECCUncorrectable:
return "cudaErrorECCUncorrectable";
case cudaErrorSharedObjectSymbolNotFound:
return "cudaErrorSharedObjectSymbolNotFound";
case cudaErrorSharedObjectInitFailed:
return "cudaErrorSharedObjectInitFailed";
case cudaErrorUnsupportedLimit:
return "cudaErrorUnsupportedLimit";
case cudaErrorDuplicateVariableName:
return "cudaErrorDuplicateVariableName";
case cudaErrorDuplicateTextureName:
return "cudaErrorDuplicateTextureName";
case cudaErrorDuplicateSurfaceName:
return "cudaErrorDuplicateSurfaceName";
case cudaErrorDevicesUnavailable:
return "cudaErrorDevicesUnavailable";
case cudaErrorInvalidKernelImage:
return "cudaErrorInvalidKernelImage";
case cudaErrorNoKernelImageForDevice:
return "cudaErrorNoKernelImageForDevice";
case cudaErrorIncompatibleDriverContext:
return "cudaErrorIncompatibleDriverContext";
case cudaErrorPeerAccessAlreadyEnabled:
return "cudaErrorPeerAccessAlreadyEnabled";
case cudaErrorPeerAccessNotEnabled:
return "cudaErrorPeerAccessNotEnabled";
case cudaErrorDeviceAlreadyInUse:
return "cudaErrorDeviceAlreadyInUse";
case cudaErrorProfilerDisabled:
return "cudaErrorProfilerDisabled";
case cudaErrorProfilerNotInitialized:
return "cudaErrorProfilerNotInitialized";
case cudaErrorProfilerAlreadyStarted:
return "cudaErrorProfilerAlreadyStarted";
case cudaErrorProfilerAlreadyStopped:
return "cudaErrorProfilerAlreadyStopped";
/* Since CUDA 4.0*/
case cudaErrorAssert:
return "cudaErrorAssert";
case cudaErrorTooManyPeers:
return "cudaErrorTooManyPeers";
case cudaErrorHostMemoryAlreadyRegistered:
return "cudaErrorHostMemoryAlreadyRegistered";
case cudaErrorHostMemoryNotRegistered:
return "cudaErrorHostMemoryNotRegistered";
/* Since CUDA 5.0 */
case cudaErrorOperatingSystem:
return "cudaErrorOperatingSystem";
case cudaErrorPeerAccessUnsupported:
return "cudaErrorPeerAccessUnsupported";
case cudaErrorLaunchMaxDepthExceeded:
return "cudaErrorLaunchMaxDepthExceeded";
case cudaErrorLaunchFileScopedTex:
return "cudaErrorLaunchFileScopedTex";
case cudaErrorLaunchFileScopedSurf:
return "cudaErrorLaunchFileScopedSurf";
case cudaErrorSyncDepthExceeded:
return "cudaErrorSyncDepthExceeded";
case cudaErrorLaunchPendingCountExceeded:
return "cudaErrorLaunchPendingCountExceeded";
case cudaErrorNotPermitted:
return "cudaErrorNotPermitted";
case cudaErrorNotSupported:
return "cudaErrorNotSupported";
/* Since CUDA 6.0 */
case cudaErrorHardwareStackError:
return "cudaErrorHardwareStackError";
case cudaErrorIllegalInstruction:
return "cudaErrorIllegalInstruction";
case cudaErrorMisalignedAddress:
return "cudaErrorMisalignedAddress";
case cudaErrorInvalidAddressSpace:
return "cudaErrorInvalidAddressSpace";
case cudaErrorInvalidPc:
return "cudaErrorInvalidPc";
case cudaErrorIllegalAddress:
return "cudaErrorIllegalAddress";
/* Since CUDA 6.5*/
case cudaErrorInvalidPtx:
return "cudaErrorInvalidPtx";
case cudaErrorInvalidGraphicsContext:
return "cudaErrorInvalidGraphicsContext";
case cudaErrorStartupFailure:
return "cudaErrorStartupFailure";
case cudaErrorApiFailureBase:
return "cudaErrorApiFailureBase";
}
return "<unknown>";
}
#endif
template< typename T >
void check(T result, char const *const func, const char *const file, int const line)
{
if (result)
{
fprintf(stderr, "CUDA error at %s:%d code=%d(%s) \"%s\" \n",
file, line, static_cast<unsigned int>(result), _cudaGetErrorEnum(result), func);
cudaDeviceReset();
// Make sure we call CUDA Device Reset before exiting
exit(EXIT_FAILURE);
}
}
int *pArgc = NULL;
char **pArgv = NULL;
#if CUDART_VERSION < 5000
// CUDA-C includes
#include <cuda.h>
// This function wraps the CUDA Driver API into a template function
template <class T>
inline void getCudaAttribute(T *attribute, CUdevice_attribute device_attribute, int device)
{
CUresult error = cuDeviceGetAttribute(attribute, device_attribute, device);
if (CUDA_SUCCESS != error) {
fprintf(stderr, "cuSafeCallNoSync() Driver API error = %04d from file <%s>, line %i.\n",
error, __FILE__, __LINE__);
// cudaDeviceReset causes the driver to clean up all state. While
// not mandatory in normal operation, it is good practice. It is also
// needed to ensure correct operation when the application is being
// profiled. Calling cudaDeviceReset causes all profile data to be
// flushed before the application exits
cudaDeviceReset();
exit(EXIT_FAILURE);
}
}
#endif /* CUDART_VERSION < 5000 */
// Beginning of GPU Architecture definitions
inline int ConvertSMVer2Cores(int major, int minor)
{
// Defines for GPU Architecture types (using the SM version to determine the # of cores per SM
typedef struct {
int SM; // 0xMm (hexidecimal notation), M = SM Major version, and m = SM minor version
int Cores;
} sSMtoCores;
sSMtoCores nGpuArchCoresPerSM[] = {
{ 0x20, 32 }, // Fermi Generation (SM 2.0) GF100 class
{ 0x21, 48 }, // Fermi Generation (SM 2.1) GF10x class
{ 0x30, 192}, // Kepler Generation (SM 3.0) GK10x class
{ 0x32, 192}, // Kepler Generation (SM 3.2) GK10x class
{ 0x35, 192}, // Kepler Generation (SM 3.5) GK11x class
{ 0x37, 192}, // Kepler Generation (SM 3.7) GK21x class
{ 0x50, 128}, // Maxwell Generation (SM 5.0) GM10x class
{ 0x52, 128}, // Maxwell Generation (SM 5.2) GM20x class
{ -1, -1 }
};
int index = 0;
while (nGpuArchCoresPerSM[index].SM != -1) {
if (nGpuArchCoresPerSM[index].SM == ((major << 4) + minor)) {
return nGpuArchCoresPerSM[index].Cores;
}
index++;
}
// If we don't find the values, we default use the previous one to run properly
printf("MapSMtoCores for SM %d.%d is undefined. Default to use %d Cores/SM\n", major, minor, nGpuArchCoresPerSM[index-1].Cores);
return nGpuArchCoresPerSM[index-1].Cores;
}
////////////////////////////////////////////////////////////////////////////////
// Program main
////////////////////////////////////////////////////////////////////////////////
int
main(int argc, char **argv)
{
pArgc = &argc;
pArgv = argv;
printf("%s Starting...\n\n", argv[0]);
printf(" CUDA Device Query (Runtime API) version (CUDART static linking)\n\n");
int deviceCount = 0;
cudaError_t error_id = cudaGetDeviceCount(&deviceCount);
if (error_id != cudaSuccess) {
printf("cudaGetDeviceCount failed: %s (%d)\n",
cudaGetErrorString(error_id), (int) error_id);
printf("Result = FAIL\n");
exit(EXIT_FAILURE);
}
// This function call returns 0 if there are no CUDA capable devices.
if (deviceCount == 0)
printf("There are no available device(s) that support CUDA\n");
else
printf("Detected %d CUDA Capable device(s)\n", deviceCount);
int dev, driverVersion = 0, runtimeVersion = 0;
for (dev = 0; dev < deviceCount; ++dev) {
cudaSetDevice(dev);
cudaDeviceProp deviceProp;
cudaGetDeviceProperties(&deviceProp, dev);
printf("\nDevice %d: \"%s\"\n", dev, deviceProp.name);
// Console log
cudaDriverGetVersion(&driverVersion);
cudaRuntimeGetVersion(&runtimeVersion);
printf(" CUDA Driver Version / Runtime Version %d.%d / %d.%d\n", driverVersion/1000, (driverVersion%100)/10, runtimeVersion/1000, (runtimeVersion%100)/10);
printf(" CUDA Capability Major/Minor version number: %d.%d\n", deviceProp.major, deviceProp.minor);
printf(" Total amount of global memory: %.0f MBytes (%llu bytes)\n",
(float)deviceProp.totalGlobalMem/1048576.0f, (unsigned long long) deviceProp.totalGlobalMem);
printf(" (%2d) Multiprocessors, (%3d) CUDA Cores/MP: %d CUDA Cores\n",
deviceProp.multiProcessorCount,
ConvertSMVer2Cores(deviceProp.major, deviceProp.minor),
ConvertSMVer2Cores(deviceProp.major, deviceProp.minor) * deviceProp.multiProcessorCount);
printf(" GPU Max Clock rate: %.0f MHz (%0.2f GHz)\n", deviceProp.clockRate * 1e-3f, deviceProp.clockRate * 1e-6f);
#if CUDART_VERSION >= 5000
// This is supported in CUDA 5.0 (runtime API device properties)
printf(" Memory Clock rate: %.0f Mhz\n", deviceProp.memoryClockRate * 1e-3f);
printf(" Memory Bus Width: %d-bit\n", deviceProp.memoryBusWidth);
if (deviceProp.l2CacheSize) {
printf(" L2 Cache Size: %d bytes\n", deviceProp.l2CacheSize);
}
#else
// This only available in CUDA 4.0-4.2 (but these were only exposed in the CUDA Driver API)
int memoryClock;
getCudaAttribute<int>(&memoryClock, CU_DEVICE_ATTRIBUTE_MEMORY_CLOCK_RATE, dev);
printf(" Memory Clock rate: %.0f Mhz\n", memoryClock * 1e-3f);
int memBusWidth;
getCudaAttribute<int>(&memBusWidth, CU_DEVICE_ATTRIBUTE_GLOBAL_MEMORY_BUS_WIDTH, dev);
printf(" Memory Bus Width: %d-bit\n", memBusWidth);
int L2CacheSize;
getCudaAttribute<int>(&L2CacheSize, CU_DEVICE_ATTRIBUTE_L2_CACHE_SIZE, dev);
if (L2CacheSize) {
printf(" L2 Cache Size: %d bytes\n", L2CacheSize);
}
#endif
printf(" Maximum Texture Dimension Size (x,y,z) 1D=(%d), 2D=(%d, %d), 3D=(%d, %d, %d)\n",
deviceProp.maxTexture1D , deviceProp.maxTexture2D[0], deviceProp.maxTexture2D[1],
deviceProp.maxTexture3D[0], deviceProp.maxTexture3D[1], deviceProp.maxTexture3D[2]);
printf(" Maximum Layered 1D Texture Size, (num) layers 1D=(%d), %d layers\n",
deviceProp.maxTexture1DLayered[0], deviceProp.maxTexture1DLayered[1]);
printf(" Maximum Layered 2D Texture Size, (num) layers 2D=(%d, %d), %d layers\n",
deviceProp.maxTexture2DLayered[0], deviceProp.maxTexture2DLayered[1], deviceProp.maxTexture2DLayered[2]);
printf(" Total amount of constant memory: %lu bytes\n", deviceProp.totalConstMem);
printf(" Total amount of shared memory per block: %lu bytes\n", deviceProp.sharedMemPerBlock);
printf(" Total number of registers available per block: %d\n", deviceProp.regsPerBlock);
printf(" Warp size: %d\n", deviceProp.warpSize);
printf(" Maximum number of threads per multiprocessor: %d\n", deviceProp.maxThreadsPerMultiProcessor);
printf(" Maximum number of threads per block: %d\n", deviceProp.maxThreadsPerBlock);
printf(" Max dimension size of a thread block (x,y,z): (%d, %d, %d)\n",
deviceProp.maxThreadsDim[0],
deviceProp.maxThreadsDim[1],
deviceProp.maxThreadsDim[2]);
printf(" Max dimension size of a grid size (x,y,z): (%d, %d, %d)\n",
deviceProp.maxGridSize[0],
deviceProp.maxGridSize[1],
deviceProp.maxGridSize[2]);
printf(" Maximum memory pitch: %lu bytes\n", deviceProp.memPitch);
printf(" Texture alignment: %lu bytes\n", deviceProp.textureAlignment);
printf(" Concurrent copy and kernel execution: %s with %d copy engine(s)\n", (deviceProp.deviceOverlap ? "Yes" : "No"), deviceProp.asyncEngineCount);
printf(" Run time limit on kernels: %s\n", deviceProp.kernelExecTimeoutEnabled ? "Yes" : "No");
printf(" Integrated GPU sharing Host Memory: %s\n", deviceProp.integrated ? "Yes" : "No");
printf(" Support host page-locked memory mapping: %s\n", deviceProp.canMapHostMemory ? "Yes" : "No");
printf(" Alignment requirement for Surfaces: %s\n", deviceProp.surfaceAlignment ? "Yes" : "No");
printf(" Device has ECC support: %s\n", deviceProp.ECCEnabled ? "Enabled" : "Disabled");
#if defined(WIN32) || defined(_WIN32) || defined(WIN64) || defined(_WIN64)
printf(" CUDA Device Driver Mode (TCC or WDDM): %s\n", deviceProp.tccDriver ? "TCC (Tesla Compute Cluster Driver)" : "WDDM (Windows Display Driver Model)");
#endif
printf(" Device supports Unified Addressing (UVA): %s\n", deviceProp.unifiedAddressing ? "Yes" : "No");
printf(" Device PCI Domain ID / Bus ID / location ID: %d / %d / %d\n", deviceProp.pciDomainID, deviceProp.pciBusID, deviceProp.pciDeviceID);
const char *sComputeMode[] = {
"Default (multiple host threads can use ::cudaSetDevice() with device simultaneously)",
"Exclusive (only one host thread in one process is able to use ::cudaSetDevice() with this device)",
"Prohibited (no host thread can use ::cudaSetDevice() with this device)",
"Exclusive Process (many threads in one process is able to use ::cudaSetDevice() with this device)",
"Unknown",
NULL
};
printf(" Compute Mode:\n");
printf(" < %s >\n", sComputeMode[deviceProp.computeMode]);
}
// If there are 2 or more GPUs, query to determine whether RDMA is supported
if (deviceCount >= 2)
{
cudaDeviceProp prop[64];
int gpuid[64]; // we want to find the first two GPU's that can support P2P
int gpu_p2p_count = 0;
for (int i=0; i < deviceCount; i++)
{
checkCudaErrors(cudaGetDeviceProperties(&prop[i], i));
// Only boards based on Fermi or later can support P2P
if ((prop[i].major >= 2)
#if defined(WIN32) || defined(_WIN32) || defined(WIN64) || defined(_WIN64)
// on Windows (64-bit), the Tesla Compute Cluster driver for windows must be enabled to supprot this
&& prop[i].tccDriver
#endif
)
{
// This is an array of P2P capable GPUs
gpuid[gpu_p2p_count++] = i;
}
}
// Show all the combinations of support P2P GPUs
int can_access_peer_0_1, can_access_peer_1_0;
if (gpu_p2p_count >= 2)
{
for (int i = 0; i < gpu_p2p_count-1; i++)
{
for (int j = 1; j < gpu_p2p_count; j++)
{
checkCudaErrors(cudaDeviceCanAccessPeer(&can_access_peer_0_1, gpuid[i], gpuid[j]));
printf("> Peer access from %s (GPU%d) -> %s (GPU%d) : %s\n", prop[gpuid[i]].name, gpuid[i],
prop[gpuid[j]].name, gpuid[j] ,
can_access_peer_0_1 ? "Yes" : "No");
}
}
for (int j = 1; j < gpu_p2p_count; j++)
{
for (int i = 0; i < gpu_p2p_count-1; i++)
{
checkCudaErrors(cudaDeviceCanAccessPeer(&can_access_peer_1_0, gpuid[j], gpuid[i]));
printf("> Peer access from %s (GPU%d) -> %s (GPU%d) : %s\n", prop[gpuid[j]].name, gpuid[j],
prop[gpuid[i]].name, gpuid[i] ,
can_access_peer_1_0 ? "Yes" : "No");
}
}
}
}
// csv masterlog info
// *****************************
// exe and CUDA driver name
printf("\n");
std::string sProfileString = "deviceQuery, CUDA Driver = CUDART";
char cTemp[128];
// driver version
sProfileString += ", CUDA Driver Version = ";
#if defined(WIN32) || defined(_WIN32) || defined(WIN64) || defined(_WIN64)
sprintf_s(cTemp, 10, "%d.%d", driverVersion/1000, (driverVersion%100)/10);
#else
sprintf(cTemp, "%d.%d", driverVersion/1000, (driverVersion%100)/10);
#endif
sProfileString += cTemp;
// Runtime version
sProfileString += ", CUDA Runtime Version = ";
#if defined(WIN32) || defined(_WIN32) || defined(WIN64) || defined(_WIN64)
sprintf_s(cTemp, 10, "%d.%d", runtimeVersion/1000, (runtimeVersion%100)/10);
#else
sprintf(cTemp, "%d.%d", runtimeVersion/1000, (runtimeVersion%100)/10);
#endif
sProfileString += cTemp;
// Device count
sProfileString += ", NumDevs = ";
#if defined(WIN32) || defined(_WIN32) || defined(WIN64) || defined(_WIN64)
sprintf_s(cTemp, 10, "%d", deviceCount);
#else
sprintf(cTemp, "%d", deviceCount);
#endif
sProfileString += cTemp;
// Print Out all device Names
for (dev = 0; dev < deviceCount; ++dev)
{
#if defined(WIN32) || defined(_WIN32) || defined(WIN64) || defined(_WIN64)
sprintf_s(cTemp, 13, ", Device%d = ", dev);
#else
sprintf(cTemp, ", Device%d = ", dev);
#endif
cudaDeviceProp deviceProp;
cudaGetDeviceProperties(&deviceProp, dev);
sProfileString += cTemp;
sProfileString += deviceProp.name;
}
sProfileString += "\n";
printf("%s", sProfileString.c_str());
printf("Result = PASS\n");
// finish
// cudaDeviceReset causes the driver to clean up all state. While
// not mandatory in normal operation, it is good practice. It is also
// needed to ensure correct operation when the application is being
// profiled. Calling cudaDeviceReset causes all profile data to be
// flushed before the application exits
cudaDeviceReset();
return 0;
}

43
pkgs/cudainfo/default.nix Normal file
View File

@@ -0,0 +1,43 @@
{
stdenv
, cudatoolkit
, cudaPackages
, autoAddDriverRunpath
, strace
}:
stdenv.mkDerivation (finalAttrs: {
name = "cudainfo";
src = ./.;
buildInputs = [
cudatoolkit # Required for nvcc
cudaPackages.cuda_cudart.static # Required for -lcudart_static
autoAddDriverRunpath
];
installPhase = ''
mkdir -p $out/bin
cp -a cudainfo $out/bin
'';
passthru.gpuCheck = stdenv.mkDerivation {
name = "cudainfo-test";
requiredSystemFeatures = [ "cuda" ];
dontBuild = true;
nativeCheckInputs = [
finalAttrs.finalPackage # The cudainfo package from above
strace # When it fails, it will show the trace
];
dontUnpack = true;
doCheck = true;
checkPhase = ''
if ! cudainfo; then
set -x
cudainfo=$(command -v cudainfo)
ldd $cudainfo
readelf -d $cudainfo
strace -f $cudainfo
set +x
fi
'';
installPhase = "touch $out";
};
})

View File

@@ -1,36 +0,0 @@
diff --git a/src/util/mpir_hwtopo.c b/src/util/mpir_hwtopo.c
index 33e88bc..ee3641c 100644
--- a/src/util/mpir_hwtopo.c
+++ b/src/util/mpir_hwtopo.c
@@ -200,18 +200,6 @@ int MPII_hwtopo_init(void)
#ifdef HAVE_HWLOC
bindset = hwloc_bitmap_alloc();
hwloc_topology_init(&hwloc_topology);
- char *xmlfile = MPIR_pmi_get_jobattr("PMI_hwloc_xmlfile");
- if (xmlfile != NULL) {
- int rc;
- rc = hwloc_topology_set_xml(hwloc_topology, xmlfile);
- if (rc == 0) {
- /* To have hwloc still actually call OS-specific hooks, the
- * HWLOC_TOPOLOGY_FLAG_IS_THISSYSTEM has to be set to assert that the loaded
- * file is really the underlying system. */
- hwloc_topology_set_flags(hwloc_topology, HWLOC_TOPOLOGY_FLAG_IS_THISSYSTEM);
- }
- MPL_free(xmlfile);
- }
hwloc_topology_set_io_types_filter(hwloc_topology, HWLOC_TYPE_FILTER_KEEP_ALL);
if (!hwloc_topology_load(hwloc_topology))
--- a/src/mpi/init/local_proc_attrs.c
+++ b/src/mpi/init/local_proc_attrs.c
@@ -79,10 +79,6 @@ int MPII_init_local_proc_attrs(int *p_thread_required)
/* Set the number of tag bits. The device may override this value. */
MPIR_Process.tag_bits = MPIR_TAG_BITS_DEFAULT;
- char *requested_kinds = MPIR_pmi_get_jobattr("PMI_mpi_memory_alloc_kinds");
- MPIR_get_supported_memory_kinds(requested_kinds, &MPIR_Process.memory_alloc_kinds);
- MPL_free(requested_kinds);
-
return mpi_errno;
}

View File

@@ -11,10 +11,6 @@ final: prev:
paths = [ pmix.dev pmix.out ];
};
in prev.mpich.overrideAttrs (old: {
patches = (old.patches or []) ++ [
# See https://github.com/pmodels/mpich/issues/6946
./mpich-fix-hwtopo.patch
];
buildInput = old.buildInputs ++ [
libfabric
pmixAll
@@ -56,4 +52,16 @@ final: prev:
prometheus-slurm-exporter = prev.callPackage ./slurm-exporter.nix { };
meteocat-exporter = prev.callPackage ./meteocat-exporter/default.nix { };
upc-qaire-exporter = prev.callPackage ./upc-qaire-exporter/default.nix { };
cudainfo = prev.callPackage ./cudainfo/default.nix { };
amd-uprof = prev.callPackage ./amd-uprof/default.nix { };
# FIXME: Extend this to all linuxPackages variants. Open problem, see:
# https://discourse.nixos.org/t/whats-the-right-way-to-make-a-custom-kernel-module-available/4636
linuxPackages = prev.linuxPackages.extend (_final: _prev: {
amd-uprof-driver = _prev.callPackage ./amd-uprof/driver.nix { };
});
linuxPackages_latest = prev.linuxPackages_latest.extend(_final: _prev: {
amd-uprof-driver = _prev.callPackage ./amd-uprof/driver.nix { };
});
}

View File

@@ -1,19 +1,25 @@
age-encryption.org/v1
-> ssh-ed25519 AY8zKw xeyzSqfio6SMS9SqywR+7II80D12Oha9T5zOgAIABSQ
ST26VaF2G1xv9l7d3jWKG32ssOivfwx+p9jLLV7ZFnU
-> ssh-ed25519 sgAamA HrRx+x7NjXKVDaealWFo+Q8zMAdzoj6nTBxw0KMi3jE
nlcEVTDTe1mPeS16/t9GYRnSSkm5EjpeiBZPIC/2f8U
-> ssh-ed25519 HY2yRg NDp5vUeX35rDV78DFQi9fsc71pQNVE8YQ1StCp+YjTg
MdUAWHd1k6Jed2pp7Wct/DgF6ShqXFwNxPaXeBOLAcs
-> ssh-ed25519 tcumPQ d0zVVB8t7W9KUapOsnsrvpAj7LgM9zS0yCv8SQnF0g8
aAPaWRTEBEQgmCkRG69NuWZ/lEva7vH+L8ifQSE0Z1I
-> ssh-ed25519 JJ1LWg 4l8GZNdGOSbqKvmKq1q1aPvjeQIwpgbJj4DBYBse7x4
rNhTiZlwzyOiCLzYRSzJ5AHebbv94dOgl1UyNmDJD8A
-> ssh-ed25519 CAWG4Q vGhwJDLJIAU8BpV6GP8Dnz2pvTAMufY4v4nvrr2O9yw
hNZZFDYUMPQNM5+qcc5arIgqQw0PXuqq1WWDTpE+EHo
-> ssh-ed25519 xA739A 8eEi9S5dMWPVR4fKVZdV5eHBOJVf2Ap+3qHSYtYHYgc
GcgzvJiqsNyZTVk12Z0FEnqB4LgfQ1xjKQwXdto1Hjs
-> ssh-ed25519 MSF3dg oUY9IjDR6hi1qbrCV5z5IcYj85cMppxO94iqkD60Eww
cBzFGrhh+kWjIi0llw2RqACU1pa7XT9kqWkSeAY8VGI
--- q7AaMOj7ZaS+Mf6trWK56o/1q/c2urrQBPAqk4PtATA
~<7E><>k-/<2F>Xw<58><77><1D>V<EFBFBD>(<18><>Z<EFBFBD>d\<5C><>t<EFBFBD>'q<><71><EFBFBD>3<EFBFBD><33>R<EFBFBD>a\yFW<46>
-> ssh-ed25519 AY8zKw /gmhFOFqOs8IobAImvQVKeM5Y6k0FpuR61/Cu5drVVI
g9FXJg2oIoien0zJ70FWHwSTM8SBwbpS188S3Swj7EM
-> ssh-ed25519 sgAamA opPjlWPhSiI0Rd5l7kd204S5FXFLcQcQftyKb7MDmnU
3XrRDVnglCP+vBwvfd1rP5gHttsGDHyXwbf10a8/kKY
-> ssh-ed25519 HY2yRg QKZbubM76C3tobPoyCFDRclA9Pzb2fC7s4WOoIgdORc
K5kckU0KhQFTE6SikJXFJgM41Tco5+VqOsaG0qLrY1Q
-> ssh-ed25519 fw2Xhg +ohqts8dLFjvdHxrGHcOGxU0dm+V3N//giljHkobpDM
jR/UzGrfS9lrJ/VeolKLxfzeJAf2fIB2pdIn/6ukqNk
-> ssh-ed25519 tcumPQ 3DPkDPIQQSVtXSLzIRETsIyXQ0k1o18Evn6vf+l/6R8
bLXF62OmJjnOT1vvgq3+AcOKKSG5NonrK5EqCVc0Mwo
-> ssh-ed25519 JJ1LWg 2Wefc7eLolMU5InEmCNTq21Mf71mI0a2N1HgDrlHvy4
qXFW9CQBnrzubZ0mzS0Io2WGRrwGBkmeYndBTcZn/fM
-> ssh-ed25519 cDBabA oiH36AoIt/fFFYgnoxtH7OoetP+2/wjtn8qo3RJDSHc
qKmkxy1aZGP4ZwC0iH7n7hiJ0+rFQYvjQb5O1a1Z0r4
-> ssh-ed25519 cK5kHw bX3RtO5StMejUYWAaA37fjHA5nO7Xs1vWDQk3yOjs2o
Egxmcf8FKAd+E5hMLmhV1yQsCo5rJyUazf1szOvpTAM
-> ssh-ed25519 CAWG4Q oKqqRDJH0w8lsoQBQk0w8PO+z5gFNmSaGBUSumvDp1I
m1zWp9MfViAmtpbJhqOHraIokDaPKb0DvvO4vAGCTWI
-> ssh-ed25519 xA739A G26kPOz6sbFATs+KAr7gbDvji13eA1smFusQAOJXMwA
Sppvz7A103kZoNxoGsd6eXeCvVh7mBE2MRwLFj9O1dY
-> ssh-ed25519 MSF3dg 55ekNcp+inbUd+GQ/VZ7BoBASaJ8YDqF74CVXy1PUxQ
aTHLLAbzQPWWld/OT3BKebc6FcmsqMTaWCPBGm1UHic
--- mVkAMnI9XQhS3fMiFuuXP/yLR9wEG9+Rr8pA4Uc0avY
<04>DU <20><>s<EFBFBD><73><EFBFBD><EFBFBD>j<EFBFBD><6A>M<EFBFBD><4D>$<24>[<5B>M<EFBFBD><4D><EFBFBD><03>[_<>K7s<37>ju<>v<EFBFBD>D<EFBFBD>4<EFBFBD>g<EFBFBD><67>܄3<>Gn<47><6E><EFBFBD> ɽ<>P<EFBFBD>7~rZs<><73>

View File

@@ -1,11 +1,13 @@
age-encryption.org/v1
-> ssh-ed25519 HY2yRg WUMWvyagPalsy7u1RaEFAwJvFowso1/quNBo+nAkxhQ
OHcebB7koPKhy58A6qngEVNWckkWChyEK3dwgy8EL5o
-> ssh-ed25519 CAWG4Q Yx/HLIryUNE2BaqTl84FrNRy4XLCY2TRkRgbA9k3qU4
LZljfuLS5yMVVK6N57iC6cKEaFP6Hh2OkvWJjuFg8q0
-> ssh-ed25519 xA739A DOXjPRttSWz51Sr7KfjgKfAtaIYMo3foB1Ywqw9HYDY
CA5puXK/1HDOitA2XHBI3OdKmZ7BzHst4DyuWGMC6hE
-> ssh-ed25519 MSF3dg +2LetdIiIZUk7wtHNS1tYsLo4ypwqZ9gpg77RQrnzHU
yIUu8BVbF3dhUx3531RR50/cJQd9gd8VfKUQzEeT/iQ
--- oY/wQ+RjZO2CmKZtbQ0yOVZ5fv2+AlvvkRu1UDfCNAA
_8`G<>=C7@x &<26><>\Ft<46>)<29><><EFBFBD><EFBFBD><EFBFBD>cPe<50><65>%<25>ֽ[zX-0<>[<11><><EFBFBD>ɲ<><C9B2>tz<74><7A>;%<25><><EFBFBD><EFBFBD><EFBFBD>~<7E>H0<48>؃*XD<58>;<3B><>
-> ssh-ed25519 HY2yRg gKGxsjHfpiRDQ6Tuvcx7pjKgrVUGweotuplLYwCGvik
DSz9j/stVyB1lXpVP+kg+H+RDgSftREGFFLQZClC3kI
-> ssh-ed25519 cK5kHw 17DpKekfNVy4V742QSd61r2w6iawtOJR7Ct3UflDXio
hsqTEPCYjHKvndMWPl4GpG23CzjGgVrS+cLIymISJHU
-> ssh-ed25519 CAWG4Q oK01d4pbBqEZVsymSiKijPvJo714xsMSRMbzkssJKiw
hs0tVFkqtIHXg9jtC2iDgCtefFcWvGJkXB+HJUcqXQs
-> ssh-ed25519 xA739A KxO+AawfLMERHwzt3YnZRwPFlCfGETma7fo8M+ZtsAY
eSn0+/rhLQxNKt5xKubKck8Nxun2Sh3eJqBU/hwgzZM
-> ssh-ed25519 MSF3dg OyaZBLB2kO8fU139lXbbC404gT7IzIWk+BMhYzabBDg
/fiPFfBJcb+e40+fZbwCw7niF2hh+JxUPiKSiwUSOWg
--- ycZyGX+Li+LsOuweF9OVPl8aoMaRgp/RdFbDrPszkUs
<EFBFBD><EFBFBD><EFBFBD><EFBFBD>YM<EFBFBD><EFBFBD>:E O<><4F>2<EFBFBD>r=<15>&4<><04>CQΣ<51><CEA3>hC<68><43><EFBFBD>cb<63>^Sy<53><79>% <09><>x-vC`g<><15><><EFBFBD><EFBFBD>W^<5E><>wVG <0B><><EFBFBD>

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View File

@@ -1,11 +1,13 @@
age-encryption.org/v1
-> ssh-ed25519 HY2yRg 6C5Cv7ILdBrpMkCTT/insUY0kyQWbfgU500Ai8ePOXY
tMw6ehFrsq2dvDEXkLOJwrNZfI28trlr9uy3xW/fzpA
-> ssh-ed25519 CAWG4Q x/j+364IYURgt7fhIPBzabbWMEg08nX8MRrJM/1Q6RU
AL5Ut2rDr3UXcQXMZJ53ZMf5wMHmT83whx0ntJfW/WU
-> ssh-ed25519 xA739A QjXftBsoGV1rVeHSKcsjp+HMpRVsaHOeeGdDcF6ZWg4
ovVoYPaPn3liGPAxHWY37CBIUFjAXurv6jMWs2He3HQ
-> ssh-ed25519 MSF3dg FG0CQOj9fRlneW5QrWiy5ksRpicUwHqX9QMpZWhDImw
L20n1vZRepsRPT4xM6TO6PcI/MJxw4mBLUF0EPv9Uhs
--- DEi7iuzkniq0JPatJ5f2KhrhxWid7ojHpvNfUCGxFtk
<EFBFBD><EFBFBD>% n<><6E>!;^Q<>rqG<71>:<3A>jC.8l<38>|<7C><>o<EFBFBD><1E><>$LYy<59>N<EFBFBD>b<EFBFBD><1E><>:<14>{<7B><><EFBFBD>fާxTS\<5C>t<04>U<EFBFBD><55>\F<>)%<25><><EFBFBD>KL<4B>㙇p<E39987>:><3E><><EFBFBD><EFBFBD>&<1B>) <0B>Q<EFBFBD>1<>H܃V<DC83><53>n<>
-> ssh-ed25519 HY2yRg U2KQWviZIVNemm9e8h7H+eOzoYNxXgLLS3hsZLMAuGk
6n5dH1McNzk3rscP4v2pqZYDWtUFMd15rZsEd/mqIFM
-> ssh-ed25519 cK5kHw Ebrj/cpz1cFWAYAV9OxgyyH85OEMUnfUIV66p7jaoFY
6J7hWqODtS/fIF4BpxhxbrxZq5vbolvbLqRKqazT02M
-> ssh-ed25519 CAWG4Q mXqoQH9ycHF7u0y8mazCgynHxNLxTnrmQHke+2a5QCc
mq6PdSF+KOqthuXwzTCsOQsi5KG0z1wHUck+bSTyOBY
-> ssh-ed25519 xA739A TADeswueqDEroZWLjMw3RDNwVQ2xRD+JUMVZENovn0M
KFlnSjVFbjc+ZsbY8Ed7edC5B01TJGzd/dSryiLArPc
-> ssh-ed25519 MSF3dg Pq+ZD8AqJGDHDbd4PO1ngNFST8+6C2ghZkO/knKzzEc
wyiL/u38hdQMokmfTsBrY7CtYwc+31FG4EDaqVEn31U
--- 1z4cOipayh0zYkvasEVEvGreajegE/dqBV7b6E7aFh0
<EFBFBD><EFBFBD><EFBFBD><EFBFBD>R<EFBFBD>@<40>/i<>I'<27><><EFBFBD>Nx<4E>r"<1D>`<1E>O<EFBFBD><4F><EFBFBD>y<><79>8<EFBFBD><38> \/<2F><>I<19><17>D<EFBFBD>`<60>ߓ<EFBFBD><DF93><EFBFBD><1E><04>uy<75><79><EFBFBD>:9Lt<4C><1D><><EFBFBD>؋<EFBFBD><D88B><EFBFBD><EFBFBD><EFBFBD><EFBFBD><EFBFBD>AU<41><55><EFBFBD><EFBFBD><EFBFBD><EFBFBD><EFBFBD>`<60>;<3B>q8<71>GLU#<23>i<EFBFBD>y<EFBFBD><79>i<03>ڜ

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@@ -2,6 +2,9 @@ let
keys = import ../keys.nix;
adminsKeys = builtins.attrValues keys.admins;
hut = [ keys.hosts.hut ] ++ adminsKeys;
fox = [ keys.hosts.fox ] ++ adminsKeys;
apex = [ keys.hosts.apex ] ++ adminsKeys;
raccoon = [ keys.hosts.raccoon ] ++ adminsKeys;
mon = [ keys.hosts.hut keys.hosts.tent ] ++ adminsKeys;
tent = [ keys.hosts.tent ] ++ adminsKeys;
# Only expose ceph keys to safe nodes and admins
@@ -24,4 +27,8 @@ in
"ceph-user.age".publicKeys = safe;
"munge-key.age".publicKeys = safe;
"wg-fox.age".publicKeys = fox;
"wg-apex.age".publicKeys = apex;
"wg-raccoon.age".publicKeys = raccoon;
}

View File

@@ -1,13 +1,13 @@
age-encryption.org/v1
-> ssh-ed25519 G5LX5w V9bHLoGuY4stRwbzVS9Qa0L9yoY+UoCoXc+dJJQW/Ag
2ut9GfdJ3KBCqZRaloZCQsl8MLfaZAZxqj6JtPJzu2k
-> ssh-ed25519 CAWG4Q OAqnIfMECpKglZ7aF9tv/PQinG1Ou2+IEZ+nf4dtQjg
dANdMLe4iI0d6Xd/dIMpZK+mgw2+VmJFQScHaIxD7WI
-> ssh-ed25519 xA739A nVNF4Y6VSa5PP6FFBJpVmoFYYseoFx5F2wJU+Pwk+Xk
A5CiuTSNlX9Y76qhYgblBdJl3zPhtjWho2oL5/sIKu0
-> ssh-ed25519 MSF3dg /WMsGnBGzquIMyw06gHKpSS4OUxheulT59kxi+/pxxU
ppwcv7RLzUbQUM7j0Tb9rRVT9XyPMhqYr2fr4S0nTJY
--- zOe0Ko0oxArbmxePMPDVAT0pDju7IeOAih7sNrDcoVs
i<EFBFBD>k<EFBFBD>A
hODV<44>w!<21> <0C><><45><DD88>+<2B><>`<60><><EFBFBD><EFBFBD>C<><43>5<EFBFBD>L<EFBFBD>A<EFBFBD>t<1A>M^ <01>E<<1B>HI<48>_<EFBFBD>nn<6E><6E><EFBFBD>o<EFBFBD>?<3F>j-<05>
A<1B>nԔί<1B>>Z<><5A>z<EFBFBD><7A><EFBFBD>dT<64><54>b"<22>(@<40><>{_ځC
-> ssh-ed25519 G5LX5w 1KfTmTRP3iSdcclf/FuIpFWpy1tgKs5ED+qSYWo7inY
RX6Q1nLFF/yiVLpkWrl0BI0PpLoBi753+y8l/AXjNE4
-> ssh-ed25519 cK5kHw TP7+OQpQSNuyArnUo1C97J3P3oB0YtzCEPeVvlzsYHE
Bsy5KPNHTVNHnF1sxOvlfJq3CNMVFaXdYkRG2vSj7qM
-> ssh-ed25519 CAWG4Q eQyzwNaH6CfaYIjs8abEuQxt6vxRXsGz69UletMUVDE
FDcynPO7xg4PWez5Z8gTg5LyE0Wgb3zT9i3Kon67QsU
-> ssh-ed25519 xA739A 2JuLai2fUu3dZBydS8cMrLrEUIUkz4NNaiupoBOtTwU
sdM3X+XRzysop7yqa76Z7FAwTHOj91STCtZvfIgCdB0
-> ssh-ed25519 MSF3dg fSPkiWnpInX1V5p3afPCoPotcGFoWFiOMPThtY927lc
8v7E/3l0xA2VWZPXzkN4NmnaA0KJutLMurn/ZXZmhxA
--- MQkyBx9hT4ILYXKoZT18PWny1QbDFymcZr63zjMN/qQ
-b<>#<23><>M.<16>@<40>t<EFBFBD><74><EFBFBD>ŵ}+ό#@<40><><EFBFBD><EFBFBD><EFBFBD>k<EFBFBD>y<EFBFBD><79><EFBFBD>?v<><76>n<1F><>T<EFBFBD>+<2B><><EFBFBD>[<5B>Q<EFBFBD> gA<67><41><EFBFBD>

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secrets/wg-apex.age Normal file

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14
secrets/wg-fox.age Normal file
View File

@@ -0,0 +1,14 @@
age-encryption.org/v1
-> ssh-ed25519 cDBabA heyW9/cxgwFX9IexQIXjAQDWGQPNcMXcArQp2Rxsqx4
o9MQ7EH8PDDjsJdpH9F3Xq2zUoaDAJQlfFmYucSFs6Y
-> ssh-ed25519 cK5kHw Sza4pos7K3qW3omEeyidI/jszJNf9smemSZnUJfCIww
D6vazXki7hIYraIuSiGPS+FPbkFUwHhHWDf52OhEIMg
-> ssh-ed25519 CAWG4Q YexIHueOIMmIN8JIDyNUOKBkyz/k18HqV3hTXh48KlM
xh8UJzzWT6ByN+Dpn4JrMNsjGC/uc/v6LynwjBDz9NQ
-> ssh-ed25519 xA739A KySG3TXdqfCMUkVEDGa74B0op745s3XGYxFLyAXSQAc
5EI/yb5ctW9Qu18bHm3/sK97kwGcKzzmWvPSCWm89XA
-> ssh-ed25519 MSF3dg MNxnNj0fHmri8ophexXPNjRUBUWrzcuk5S1mucxUMTE
GVFWXtISEU8ZmlwL4nh4weAgfGrt2GHX0DTzbpS6zg8
--- UdrqkYG2ZApAuwdZeNhC50NP2rkD/Ol6y8nJa4RHx7Y
<EFBFBD>ܻ<EFBFBD>m(<28><><EFBFBD>><3E>H<48>Y87<><37>G<0F>+*<12><><EFBFBD><EFBFBD>9V<>.<2E><><EFBFBD><EFBFBD><03><><EFBFBD>p<EFBFBD>Oo<4F>=+哇<>P0<50><30>{<7B>)<29><17><><EFBFBD><EFBFBD>><3E>z3P^
u

BIN
secrets/wg-raccoon.age Normal file

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1
web/.gitignore vendored
View File

@@ -1 +0,0 @@
./public

View File

@@ -1,6 +0,0 @@
---
title: "{{ replace .Name "-" " " | title }}"
date: {{ .Date }}
draft: true
---

View File

@@ -1,25 +0,0 @@
![Rainforest](jungle.jpg)
Welcome to the jungle, a set of machines with no imposed rules that are fully
controlled and maintained by their users.
The configuration of all the machines is written in a centralized [git
repository][config] using the Nix language for NixOS. Changes in the
configuration of the machines are introduced by merge requests and pass a review
step before being deployed.
[config]: https://pm.bsc.es/gitlab/rarias/jungle
The machines have access to the large list of packages available in
[Nixpkgs][nixpkgs] and a custom set of packages named [bscpkgs][bscpkgs],
specifically tailored to our needs for HPC machines. Users can install their own
packages and made them system-wide available by opening a merge request.
[nixpkgs]: https://github.com/NixOS/nixpkgs
[bscpkgs]: https://pm.bsc.es/gitlab/rarias/bscpkgs
We have put a lot of effort to guarantee very good reproducibility properties in
the configuration of the machines and the software they use.
To enter the jungle machines follow the [instructions](access) to submit a
request.

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@@ -1,16 +0,0 @@
---
title: "Enter the jungle"
description: "Request access to the machines"
---
![Cave](./cave.jpg)
To request access to the machines we will need some information:
1. Which machines you want access to ([hut](/hut), [fox](/fox), owl1, owl2, eudy, koro...)
1. Your user name (make sure it matches the one you use for the BSC intranet)
1. Your real name and surname (for identification purposes)
1. The salted hash of your login password, generated with `mkpasswd -m sha-512`
1. An SSH public key of type Ed25519 (can be generated with `ssh-keygen -t ed25519`)
Send an email to <jungle@bsc.es> with the details.

View File

@@ -1,10 +0,0 @@
---
title: "Docs"
description: "Documentation for users of jungle machines"
date: 2023-09-15
---
If this is the first time you use any of the jungle machines with NixOS, follow
the [quick start guide](quickstart).

View File

@@ -1,234 +0,0 @@
---
title: "Quick start"
date: 2023-09-15
---
This documentation will guide you on how to build custom packages of software
and use them in the jungle machines. It has been designed to reduce the friction
from users coming from module systems.
You should be able to access the jungle machines, otherwise [request
access](/access).
## Changes from other HPC machines
Users of other machines have been using the Lmod tool (module load ...) to add
or remove programs from their environment, as well as manually building their
own software for too many years.
While we cannot prevent users from continuing to use this tedious mechanism, we
have designed the jungle machines to be much easier to operate by using the nix
package manager.
### Freedom to install packages
When a user wanted to install a package, it was forced to either do it on its
own directory, or request a system administrator to install it in a shared
directory, so other users can also use that package.
This situation is gone, each user can install any package of software by
themselves, without requiring any other authorization. When two users request
the same package, the same copy will be provided.
A new package will be downloaded if it is available (someone already built it)
or will be built from source on demand.
### No changes over time
All users retain the same versions of the packages they request until they
decide to update them.
## Using nix to manage packages
In this chapter we show how to install packages and enter a development shell to
build new programs from source. The examples are done from the hut machine,
read [this page](/access) to request access.
### Installing binaries
To temporarily install new packages, use:
```text
hut% nix shell jungle#gcc jungle#cowsay jungle#ovni
```
Notice that the packages are described as two parts divided by the `#` symbol.
The first part defines where to take the package from and the second part is
the name of the package. For now we will use `jungle#<package>`. You can find
many more packages here:
<https://search.nixos.org/packages>
You will now enter a new shell, where those requested package **binaries are
available in $PATH**:
```text
hut% cowsay hello world
_____________
< hello world >
-------------
\ ^__^
\ (oo)\_______
(__)\ )\/\
||----w |
|| ||
hut% ovniver
LD_LIBRARY_PATH not set
libovni: build v1.11.0 (a7103f8), dynamic v1.11.0 (a7103f8)
hut% gcc --version
gcc (GCC) 13.3.0
Copyright (C) 2023 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
```
### Building programs
The above method only loads new binaries in the `$PATH`. If we try to build a
program that includes headers or links with a library, it will fail to find
them:
```text
hut$ cat test.c
#include <ovni.h>
int main()
{
ovni_version_check();
return 0;
}
hut% gcc test.c -lovni -o test
test.c:1:10: fatal error: ovni.h: No such file or directory
1 | #include <ovni.h>
| ^~~~~~~~
compilation terminated.
```
We could manually add the full path to the ovni include directory with `-I` and
the libraries with `-L`, but there is a tool that already perform these steps
automatically for us, `nix develop`.
Let's go back to our original shell first, where those packages are not
available anymore:
```
hut% ps
PID TTY TIME CMD
2356260 pts/1 00:00:01 zsh
2457268 pts/1 00:00:00 zsh
2457297 pts/1 00:00:00 ps
hut% exit
hut% ovniver
ovniver: command not found
```
### Creating a flake.nix
To define which packages we want, we will write a small file that list them, a
flake.nix file.
First, we will create a new directory where we are going to be working:
```
hut% mkdir example
hut% cd exmple
```
Then place this flake.nix file:
```nix
{
inputs.jungle.url = "jungle";
outputs = { self, jungle }:
let
pkgs = jungle.outputs.packages.x86_64-linux;
in {
devShells.x86_64-linux.default = pkgs.mkShell {
pname = "devshell";
buildInputs = with pkgs; [
ovni gcc cowsay # more packages here...
];
};
};
}
```
Now enter the shell with:
```
hut% nix develop
warning: creating lock file '/home/Computational/rarias/example/flake.lock':
• Added input 'jungle':
'path:/nix/store/27srv8haj6vv4ywrbmw0a8vds561m8rq-source?lastModified=1739479441&narHash=sha256-Kgjs8SO1w9NbPBu8ghwzCxYJ9kvWpoQOT%2BXwPvA9DcU%3D&rev=76396c0d67ef0cf32377d5c1894bb695293bca9d' (2025-02-13)
• Added input 'jungle/agenix':
'github:ryantm/agenix/f6291c5935fdc4e0bef208cfc0dcab7e3f7a1c41?narHash=sha256-b%2Buqzj%2BWa6xgMS9aNbX4I%2BsXeb5biPDi39VgvSFqFvU%3D' (2024-08-10)
• Added input 'jungle/agenix/darwin':
'github:lnl7/nix-darwin/4b9b83d5a92e8c1fbfd8eb27eda375908c11ec4d?narHash=sha256-gzGLZSiOhf155FW7262kdHo2YDeugp3VuIFb4/GGng0%3D' (2023-11-24)
• Added input 'jungle/agenix/darwin/nixpkgs':
follows 'jungle/agenix/nixpkgs'
• Added input 'jungle/agenix/home-manager':
'github:nix-community/home-manager/3bfaacf46133c037bb356193bd2f1765d9dc82c1?narHash=sha256-7ulcXOk63TIT2lVDSExj7XzFx09LpdSAPtvgtM7yQPE%3D' (2023-12-20)
• Added input 'jungle/agenix/home-manager/nixpkgs':
follows 'jungle/agenix/nixpkgs'
• Added input 'jungle/agenix/nixpkgs':
follows 'jungle/nixpkgs'
• Added input 'jungle/agenix/systems':
'github:nix-systems/default/da67096a3b9bf56a91d16901293e51ba5b49a27e?narHash=sha256-Vy1rq5AaRuLzOxct8nz4T6wlgyUR7zLU309k9mBC768%3D' (2023-04-09)
• Added input 'jungle/bscpkgs':
'git+https://git.sr.ht/~rodarima/bscpkgs?ref=refs/heads/master&rev=6782fc6c5b5a29e84a7f2c2d1064f4bcb1288c0f' (2024-11-29)
• Added input 'jungle/bscpkgs/nixpkgs':
follows 'jungle/nixpkgs'
• Added input 'jungle/nixpkgs':
'github:NixOS/nixpkgs/9c6b49aeac36e2ed73a8c472f1546f6d9cf1addc?narHash=sha256-i/UJ5I7HoqmFMwZEH6vAvBxOrjjOJNU739lnZnhUln8%3D' (2025-01-14)
hut$
```
Notice that long list of messages is Nix creating a new flake.lock file with the
current state of the packages. Next invocations will use the same packages as
described by the lock file.
### Building a program from nix develop
Now let's try again building our test program:
```text
hut$ cat test.c
#include <ovni.h>
int main()
{
ovni_version_check();
return 0;
}
hut$ gcc test.c -o test -lovni
hut$ ldd test
linux-vdso.so.1 (0x00007ffff7fc4000)
libovni.so.1 => /nix/store/sqk972akjv0q8dchn8ccjln2llzyyfd0-ovni-1.11.0/lib/libovni.so.1 (0x00007ffff7fab000)
libc.so.6 => /nix/store/nqb2ns2d1lahnd5ncwmn6k84qfd7vx2k-glibc-2.40-36/lib/libc.so.6 (0x00007ffff7db2000)
/nix/store/nqb2ns2d1lahnd5ncwmn6k84qfd7vx2k-glibc-2.40-36/lib/ld-linux-x86-64.so.2 => /nix/store/nqb2ns2d1lahnd5ncwmn6k84qfd7vx2k-glibc-2.40-36/lib64/ld-linux-x86-64.so.2 (0x00007ffff7fc6000)
hut$ ./test
```
Now the ovni.h header and the libovni library are found and the program is
successfully built, linked and executed.
You can add more packages as needed in your flake.nix:
```nix
buildInputs = with pkgs; [
ovni gcc cowsay # more packages here...
];
```
Make sure you exit the develop shell first, and then enter again with `nix
develop`.
## Remember
- `nix shell` places binaries in the `$PATH`.
- `nix develop` enters a development shell where both binaries and the libraries
and includes are available so you can build new programs.

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---
title: "Eudy"
description: "Linux kernel experiments"
---
[![Eudy](eudy.jpg)](https://commons.wikimedia.org/w/index.php?curid=5817408)
The *eudy* machine is destined as a playground for Linux kernel experiments. The
name is a shorthand of the Eudyptula species of little penguins found the New
Zealand and Australia.

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---
title: "Fox"
description: "AMD Genoa 9684X with 2 NVIDIA RTX4000 GPUs"
date: 2025-02-12
---
![Fox](fox.jpg)
Picture by [Joanne Redwood](https://web.archive.org/web/20191109175146/https://www.inaturalist.org/photos/6568074),
[CC0](http://creativecommons.org/publicdomain/zero/1.0/deed.en).
The *fox* machine is a big GPU server that is configured to run heavy workloads.
It has two fast AMD CPUs with large cache and 2 reasonable NVIDIA GPUs. Here are
the detailed specifications:
- 2x AMD GENOA X 9684X DP/UP 96C/192T 2.55G 1,150M 400W SP5 3D V-cach
- 24x 32GB DDR5-4800 ECC RDIMM (total 768 GiB of RAM)
- 1x 2.5" SSD SATA3 MICRON 5400 MAX 480GB
- 2x 2.5" KIOXIA CM7-R 1.92TB NVMe GEN5 PCIe 5x4
- 2x NVIDIA RTX4000 ADA Gen 20GB GDDR6 PCIe 4.0
## Access
To access the machine, request a SLURM session from [hut](/hut) using the `fox`
partition:
hut% salloc -p fox
Then connect via ssh:
hut% ssh fox
fox%
Follow [these steps](/access) if you don't have access to hut or fox.
## CUDA
To use CUDA, you can use the following `flake.nix` placed in a new directory to
load all the required dependencies:
```nix
{
inputs.jungle.url = "jungle";
outputs = { jungle, ... }: {
devShell.x86_64-linux = let
pkgs = jungle.nixosConfigurations.fox.pkgs;
in pkgs.mkShell {
name = "cuda-env-shell";
buildInputs = with pkgs; [
git gitRepo gnupg autoconf curl
procps gnumake util-linux m4 gperf unzip
# Cuda packages (more at https://search.nixos.org/packages)
cudatoolkit linuxPackages.nvidia_x11
cudaPackages.cuda_cudart.static
cudaPackages.libcusparse
libGLU libGL
xorg.libXi xorg.libXmu freeglut
xorg.libXext xorg.libX11 xorg.libXv xorg.libXrandr zlib
ncurses5 stdenv.cc binutils
];
shellHook = ''
export CUDA_PATH=${pkgs.cudatoolkit}
export LD_LIBRARY_PATH=/var/run/opengl-driver/lib
export SMS=50
'';
};
};
}
```
Then just run `nix develop` from the same directory:
% mkdir cuda
% cd cuda
% vim flake.nix
[...]
% nix develop
$ nvcc -V
nvcc: NVIDIA (R) Cuda compiler driver
Copyright (c) 2005-2024 NVIDIA Corporation
Built on Tue_Feb_27_16:19:38_PST_2024
Cuda compilation tools, release 12.4, V12.4.99
Build cuda_12.4.r12.4/compiler.33961263_0
## Filesystems
The machine has several file systems available.
- `$HOME`: Mounted via NFS across all nodes. It is slow and has low capacity.
Don't abuse.
- `/ceph/home/$USER`: Shared Ceph file system across jungle nodes. Slow but high
capacity. Stores three redundant copies of every file.
- `/nvme{0,1}/$USER`: The two local NVME disks, very fast and large capacity.
- `/tmp`: tmpfs, fast but not backed by a disk. Will be erased on reboot.

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---
title: "Git"
description: "Gitea instance"
---
If you are reading this page, the proxy to the Gitea service is not working.

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---
title: "Grafana"
description: "Monitor metrics"
---
If you are reading this page, the proxy to the Grafana service is not working.

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---
title: "Hut"
description: "Control node"
date: 2023-06-13T19:36:57+02:00
---
![Hut](hut.jpg)
From the hut we monitor and control other nodes. It consist of one node only,
which is available at `hut` or `xeon07`. It runs the following services:
- Prometheus: to store the monitoring data.
- Grafana: to plot the data in the web browser.
- Slurmctld: to manage the SLURM nodes.
- Gitlab runner: to run CI jobs from Gitlab.
- Nix binary cache: to serve cached nix builds
This node is prone to interruptions from all the services it runs, so it is not
a good candidate for low noise executions.
# Binary cache
We provide a binary cache in `hut`, with the aim of avoiding unnecessary
recompilation of packages.
The cache should contain common packages from bscpkgs, but we don't provide
any guarantee that of what will be available in the cache, or for how long.
We recommend following the latest version of the `jungle` flake to avoid cache
misses.
## Usage
### From NixOS
In NixOS, we can add the cache through the `nix.settings` option, which will
enable it for all builds in the system.
```nix
{ ... }: {
nix.settings = {
extra-substituters = [ "https://jungle.bsc.es/cache" ];
extra-trusted-public-keys = [ "jungle.bsc.es:pEc7MlAT0HEwLQYPtpkPLwRsGf80ZI26aj29zMw/HH0=" ];
};
}
```
### Interactively
The cache can also be specified in a per-command basis through the flags
`--substituters` and `--trusted-public-keys`:
```sh
nix build --substituters "https://jungle.bsc.es/cache" --trusted-public-keys "jungle.bsc.es:pEc7MlAT0HEwLQYPtpkPLwRsGf80ZI26aj29zMw/HH0=" <...>
```
Note: you'll have to be a trusted user.
### Nix configuration file (non-nixos)
If using nix outside of NixOS, you'll have to update `/etc/nix/nix.conf`
```
# echo "extra-substituters = https://jungle.bsc.es/cache" >> /etc/nix/nix.conf
# echo "extra-trusted-public-keys = jungle.bsc.es:pEc7MlAT0HEwLQYPtpkPLwRsGf80ZI26aj29zMw/HH0=" >> /etc/nix/nix.conf
```
### Hint in flakes
By adding the configuration below to a `flake.nix`, when someone uses the flake,
`nix` will interactively ask to trust and use the provided binary cache:
```nix
{
nixConfig = {
extra-substituters = [
"https://jungle.bsc.es/cache"
];
extra-trusted-public-keys = [
"jungle.bsc.es:pEc7MlAT0HEwLQYPtpkPLwRsGf80ZI26aj29zMw/HH0="
];
};
outputs = { ... }: {
...
};
}
```
### Querying the cache
Check if the cache is available:
```sh
$ curl https://jungle.bsc.es/cache/nix-cache-info
StoreDir: /nix/store
WantMassQuery: 1
Priority: 30
```
Prevent nix from building locally:
```bash
nix build --max-jobs 0 <...>
```
Check if a package is in cache:
```bash
# Do a raw eval on the <package>.outPath (this should not build the package)
$ nix eval --raw jungle#openmp.outPath
/nix/store/dwnn4dgm1m4184l4xbi0qfrprji9wjmi-openmp-2024.11
# Take the hash (everything from / to - in the basename) and curl <hash>.narinfo
# if it exists in the cache, it will return HTTP 200 and some information
# if not, it will return 404
$ curl https://jungle.bsc.es/cache/dwnn4dgm1m4184l4xbi0qfrprji9wjmi.narinfo
StorePath: /nix/store/dwnn4dgm1m4184l4xbi0qfrprji9wjmi-openmp-2024.11
URL: nar/dwnn4dgm1m4184l4xbi0qfrprji9wjmi-17imkdfqzmnb013d14dx234bx17bnvws8baf3ii1xra5qi2y1wiz.nar
Compression: none
NarHash: sha256:17imkdfqzmnb013d14dx234bx17bnvws8baf3ii1xra5qi2y1wiz
NarSize: 1519328
References: 4gk773fqcsv4fh2rfkhs9bgfih86fdq8-gcc-13.3.0-lib nqb2ns2d1lahnd5ncwmn6k84qfd7vx2k-glibc-2.40-36
Deriver: vcn0x8hikc4mvxdkvrdxp61bwa5r7lr6-openmp-2024.11.drv
Sig: jungle.bsc.es:GDTOUEs1jl91wpLbb+gcKsAZjpKdARO9j5IQqb3micBeqzX2M/NDtKvgCS1YyiudOUdcjwa3j+hyzV2njokcCA==
# In oneline:
$ curl "https://jungle.bsc.es/cache/$(nix eval --raw jungle#<package>.outPath | cut -d '/' -f4 | cut -d '-' -f1).narinfo"
```
#### References
- https://nix.dev/guides/recipes/add-binary-cache.html
- https://nixos.wiki/wiki/Binary_Cache

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---
title: "Lake"
description: "Data storage"
date: 2023-06-13T19:36:57+02:00
draft: true
---
![Lake](lake.jpg)
Data storage

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---
title: "Lists"
description: "Mailing lists"
---
If you are reading this page, the proxy to the public-inbox service is not working.

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---
title: "Owl"
description: "Low system noise"
---
![Owl](owl.jpg)
Much like the silent flight of an owl at night, these nodes are configured to
minimize the system noise and let programs run undisturbed. The list of nodes is
`owl[1-2]` and are available for jobs with SLURM.
The contents of the nix store of the hut node is made available in the owl nodes
when a job is running. This allows jobs to access the same paths that are on hut
to load dependencies.
For now, only the hut node can be used to build new derivations so that they
appear in the compute nodes. This applies to the `nix build`, `nix develop` and
`nix shell` commands.

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