Add passthru in ompss2 wrapper for icpx compat

Update onemath v0.8
Remove deprecation warnings in sycl test
2025-07-21 18:18:47 +02:00 · 2025-07-21 18:18:47 +02:00 · 2025-07-21 18:18:47 +02:00 · 2025-07-21 18:18:47 +02:00 · 2025-07-21 18:18:47 +02:00 · 2025-07-21 18:18:47 +02:00
36 changed files with 156 additions and 768 deletions
--- a/flake.nix
+++ b/flake.nix
@@ -2,25 +2,16 @@
  inputs.nixpkgs.url = "nixpkgs";

  outputs = { self, nixpkgs, ...}:
-    let
+  let
+    pkgs = import nixpkgs {
      # For now we only support x86
      system = "x86_64-linux";
-      pkgs = import nixpkgs {
-        inherit system;
-        overlays = [ self.overlays.default ];
-      };
-    in
+      overlays = [ self.overlays.default ];
+    };
+  in
    {
      bscOverlay = import ./overlay.nix;
      overlays.default = self.bscOverlay;
-      # full nixpkgs with our overlay applied
-      legacyPackages.${system} = pkgs;
-
-      hydraJobs = {
-        inherit (self.legacyPackages.${system}.bsc-ci) test pkgs cross;
-      };
-
-      # propagate nixpkgs lib, so we can do bscpkgs.lib
-      inherit (nixpkgs) lib;
+      legacyPackages.x86_64-linux = pkgs;
    };
 }
--- a/overlay.nix
+++ b/overlay.nix
@@ -1,22 +1,15 @@
 final: /* Future last stage */
 prev:  /* Previous stage */

-let
-  inherit (prev.lib) collect isDerivation mapAttrs filterAttrs;
+with final.lib;

-  inherit (final) callPackage;
+let
+  callPackage = final.callPackage;

  mkDeps = name: pkgs: final.runCommand name { }
    "printf '%s\n' ${toString (collect (x: x ? outPath) pkgs)} > $out";

-  mkStrict = drv: if (isDerivation drv && drv ? overrideAttrs && !(drv ? strictDeps))
-    then drv.overrideAttrs { strictDeps = true; }
-    else drv;
-
-  bscPkgs = mapAttrs (_: mkStrict) {
-    aoccUnwrapped = callPackage ./pkgs/aocc/unwrapped.nix { };
-    aocc = callPackage ./pkgs/aocc/default.nix { };
-    stdenvAocc = final.overrideCC final.stdenv final.aocc;
+  bscPkgs = {
    bench6 = callPackage ./pkgs/bench6/default.nix { };
    bigotes = callPackage ./pkgs/bigotes/default.nix { };
    clangOmpss2 = callPackage ./pkgs/llvm-ompss2/default.nix { };
@@ -24,9 +17,8 @@ let
    clangOmpss2Nodes = callPackage ./pkgs/llvm-ompss2/default.nix { ompss2rt = final.nodes; openmp = final.openmp; };
    clangOmpss2NodesOmpv = callPackage ./pkgs/llvm-ompss2/default.nix { ompss2rt = final.nodes; openmp = final.openmpv; };
    clangOmpss2Unwrapped = callPackage ./pkgs/llvm-ompss2/clang.nix { };
-    clsparse = callPackage ./pkgs/clsparse/package.nix { };
    #extrae = callPackage ./pkgs/extrae/default.nix { }; # Broken and outdated
-    gpi-2 = callPackage ./pkgs/gpi-2/default.nix { };
+    #gpi-2 = callPackage ./pkgs/gpi-2/default.nix { }; # Broken: https://jungle.bsc.es/git/rarias/bscpkgs/issues/7
    intel-apt = callPackage ./pkgs/intel-oneapi/packages.nix { };
    intelPackages_2023 = callPackage ./pkgs/intel-oneapi/2023.nix { };
    intelPackages_2024 = final.intel-apt.hpckit_2024;
@@ -57,23 +49,11 @@ let
    stdenvClangOmpss2Nanos6 = final.stdenv.override { cc = final.clangOmpss2Nanos6; allowedRequisites = null; };
    stdenvClangOmpss2Nodes = final.stdenv.override { cc = final.clangOmpss2Nodes; allowedRequisites = null; };
    stdenvClangOmpss2NodesOmpv = final.stdenv.override { cc = final.clangOmpss2NodesOmpv; allowedRequisites = null; };
-    tagaspi = callPackage ./pkgs/tagaspi/default.nix { };
+    #tagaspi = callPackage ./pkgs/tagaspi/default.nix { }; # Broken due gpi-2
    tampi = callPackage ./pkgs/tampi/default.nix { };
-    tacuda = callPackage ./pkgs/tacuda/default.nix { };
-    taopencl = callPackage ./pkgs/taopencl/default.nix { };
    tasycl = callPackage ./pkgs/tasycl/default.nix { };
    tasycl-acpp = callPackage ./pkgs/tasycl/default.nix { useIntel = false; };
    wxparaver = callPackage ./pkgs/paraver/default.nix { };
-
-    # Fix for RISC-V cross compilation
-    # TODO: remove once we update to 25.11
-    # https://github.com/NixOS/nixpkgs/commit/d9c222c81435b
-    prrte = prev.prrte.overrideAttrs (prevAttrs: {
-      configureFlags = (prevAttrs.configureFlags or []) ++ [
-        "--with-pmix=${prev.lib.getDev final.pmix}"
-        "--with-pmix-libdir=${prev.lib.getLib final.pmix}/lib"
-      ];
-    });
  };

 in bscPkgs // {
@@ -126,21 +106,15 @@ in bscPkgs // {
      };
    };

-    pkgs = filterAttrs (_: isDerivation) bscPkgs;
-
-    pkgsList = final.runCommand "ci-pkgs" { }
+    pkgs = final.runCommand "ci-pkgs" { }
      "printf '%s\n' ${toString (collect isDerivation bscPkgs)} > $out";

    tests = final.runCommand "ci-tests" { }
      "printf '%s\n' ${toString (collect isDerivation final.bsc-ci.test)} > $out";

-    cross = prev.lib.genAttrs [ "riscv64" ] (target:
-      final.pkgsCross.${target}.bsc-ci.pkgs
-    );
-
    all = final.runCommand "ci-all" { }
    ''
-      deps="${toString [ final.bsc-ci.pkgsList final.bsc-ci.tests ]}"
+      deps="${toString [ final.bsc-ci.pkgs final.bsc-ci.tests ]}"
      cat $deps
      printf '%s\n' $deps > $out
    '';
--- a/pkgs/aocc/default.nix
+++ b/pkgs/aocc/default.nix
@@ -1,16 +0,0 @@
-{ wrapCCWith
-, aoccUnwrapped
-}:
-
-let
-  cc = aoccUnwrapped;
-in wrapCCWith {
-  inherit cc;
-
-  extraBuildCommands = ''
-    echo "-isystem ${cc}/include" >> $out/nix-support/cc-cflags
-
-    wrap aocc   $wrapper $ccPath/clang
-    wrap aocc++ $wrapper $ccPath/clang++
-  '';
-}
--- a/pkgs/aocc/unwrapped.nix
+++ b/pkgs/aocc/unwrapped.nix
@@ -1,51 +0,0 @@
-{ lib
-, fetchurl
-, stdenv
-, autoPatchelfHook
-, rocmPackages
-, zlib
-, libffi
-, elfutils
-}:
-
-let
-  # in newer nixpkgs the runtime is hsakmt
-  rocmRuntime =
-    if rocmPackages ? hsakmt then
-      rocmPackages.hsakmt
-    else
-      rocmPackages.rocm-runtime;
-in
-stdenv.mkDerivation {
-  pname = "aocc-compiler";
-  version = "5.0.0";
-
-  src = fetchurl {
-    url = "https://download.amd.com/developer/eula/aocc/aocc-5-0/aocc-compiler-5.0.0.tar";
-    sha256 = "sha256-lm+sLSx1np3m6WnBCtp6ezBsET9/HgfqN2gp7IY4Dao=";
-  };
-
-  nativeBuildInputs = [ autoPatchelfHook ];
-  buildInputs = [
-    elfutils
-    zlib
-    rocmRuntime
-    stdenv.cc.cc.lib
-  ];
-  phases = [ "unpackPhase" "installPhase" "fixupPhase" ];
-  dontStrip = true;
-
-  installPhase = ''
-    mkdir -p $out
-    cp -a . $out/
-
-    ln -s ${lib.getLib libffi}/lib/libffi.so $out/lib/libffi.so.6
-  '';
-
-  passthru = {
-    inherit rocmRuntime;
-    isClang = true; # Needed for wrapCCWith
-  };
-
-  meta.mainProgram = "clang";
-}
--- a/pkgs/bench6/default.nix
+++ b/pkgs/bench6/default.nix
@@ -27,13 +27,10 @@ stdenv.mkDerivation rec {
    rev = gitCommit;
  };

-  nativeBuildInputs = [
-    cmake
-    clangOmpss2
-  ];
-
  buildInputs = [
    bigotes
+    cmake
+    clangOmpss2
    openmp
    openmpv
    nanos6
--- a/pkgs/bigotes/default.nix
+++ b/pkgs/bigotes/default.nix
@@ -4,7 +4,7 @@
 , cmake
 }:

-stdenv.mkDerivation {
+stdenv.mkDerivation rec {
  pname = "bigotes";
  version = "9dce13";
  src = fetchFromGitHub {
@@ -13,5 +13,5 @@ stdenv.mkDerivation {
    rev = "9dce13446a8da30bea552d569d260d54e0188518";
    sha256 = "sha256-ktxM3pXiL8YXSK+/IKWYadijhYXqGoLY6adLk36iigE=";
  };
-  nativeBuildInputs = [ cmake ];
+  buildInputs = [ cmake ];
 }
--- a/pkgs/clsparse/install_target.patch
+++ b/pkgs/clsparse/install_target.patch
@@ -1,53 +0,0 @@
-diff --git a/CMakeLists.txt b/CMakeLists.txt
-index 3d139ed..15ffc14 100644
--- a/CMakeLists.txt
-+++ b/CMakeLists.txt
-@@ -176,32 +179,22 @@ if( BUILD_clSPARSE OR BUILD_SAMPLES )
-   if( BUILD_clSPARSE )
-     message( STATUS "Setting up clSPARSE external..." )
- 
-    if ( BUILD_SAMPLES )
-      # If the user elects to build samples, then we must build and install clSPARSE
-      # The install location is set as a subdirectory of the SuperBuild
-      ExternalProject_Add(
-        clSPARSE
-        DEPENDS ${clSPARSE.Dependencies}
-        SOURCE_DIR ${PROJECT_SOURCE_DIR}/src
-        BINARY_DIR clSPARSE-build
-        INSTALL_DIR clSPARSE-package
-        CMAKE_ARGS ${clSPARSE.Cmake.Args} -DCMAKE_BUILD_TYPE=${CMAKE_BUILD_TYPE}
-        -DBUILD_CLVERSION=${BUILD_CLVERSION} -DCMAKE_INSTALL_PREFIX=<INSTALL_DIR>
-        -DUSE_SYSTEM_CL2HPP:BOOL=${USE_SYSTEM_CL2HPP}
-      )
-    else( )
-      # If the user does not want to build samples, then build clSPARSE but don't automatically
-      # install it
-      ExternalProject_Add(
-        clSPARSE
-        DEPENDS ${clSPARSE.Dependencies}
-        SOURCE_DIR ${PROJECT_SOURCE_DIR}/src
-        BINARY_DIR clSPARSE-build
-        CMAKE_ARGS ${clSPARSE.Cmake.Args} -DCMAKE_BUILD_TYPE=${CMAKE_BUILD_TYPE}
-        -DBUILD_CLVERSION=${BUILD_CLVERSION} -DUSE_SYSTEM_CL2HPP:BOOL=${USE_SYSTEM_CL2HPP}
-        INSTALL_COMMAND ""
-      )
-    endif( )
-+    ExternalProject_Add(
-+      clSPARSE
-+      DEPENDS ${clSPARSE.Dependencies}
-+      SOURCE_DIR ${PROJECT_SOURCE_DIR}/src
-+      BINARY_DIR clSPARSE-build
-+      INSTALL_DIR clSPARSE-package
-+      CMAKE_ARGS ${clSPARSE.Cmake.Args} -DCMAKE_BUILD_TYPE=${CMAKE_BUILD_TYPE}
-+      -DBUILD_CLVERSION=${BUILD_CLVERSION} -DCMAKE_INSTALL_PREFIX=<INSTALL_DIR>
-+      -DUSE_SYSTEM_CL2HPP:BOOL=${USE_SYSTEM_CL2HPP}
-+    )
-+
-+    install(
-+      DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/clSPARSE-package/
-+      DESTINATION ${CMAKE_INSTALL_PREFIX}
-+      USE_SOURCE_PERMISSIONS
-+    )
- 
-   endif( )
- 
--- a/pkgs/clsparse/package.nix
+++ b/pkgs/clsparse/package.nix
@@ -1,70 +0,0 @@
-{
-  lib,
-  stdenv,
-  fetchFromGitHub,
-  fetchpatch,
-  boost,
-  gtest,
-  ocl-icd,
-  opencl-headers,
-  opencl-clhpp,
-  cmake,
-}:
-
-stdenv.mkDerivation rec {
-  pname = "clsparse";
-  version = "0.10.2.0";
-
-  src = fetchFromGitHub {
-    owner = "clMathLibraries";
-    repo = "clSPARSE";
-    rev = "v${version}";
-    hash = "sha256-jIauCtUyPEIx7pFI3qH0WagV+t/fvro0OsGgONBJm0s=";
-  };
-
-  patches = [
-    ./pass_include_dir.patch
-    ./install_target.patch
-    (fetchpatch {
-      name = "remove-gettypecode.patch";
-      url = "https://patch-diff.githubusercontent.com/raw/clMathLibraries/clSPARSE/pull/210.patch";
-      hash = "sha256-9Q+tk7RMdWE4MCnbvWlsI0MIgBYKIWR2jIC1bICtIjU=";
-    })
-  ];
-
-  postInstallPhase = ''
-    mv $installDir/lib64 lib
-    ln -s lib/ lib64
-  '';
-
-  env.NIX_CFLAGS_COMPILE = "-std=c++17";
-
-  nativeBuildInputs = [
-    cmake
-  ];
-
-  buildInputs = [
-    boost
-    ocl-icd
-    opencl-headers
-    opencl-clhpp
-  ];
-
-  cmakeFlags = [
-    "-DBUILD_Boost=OFF"
-    "-DBUILD_gMock=OFF"
-    "-DBUILD_MTX=OFF"
-    "-DBUILD_SAMPLES=OFF"
-    "-DUSE_SYSTEM_CL2HPP=ON"
-    "-DGMOCK_ROOT=${gtest}"
-    "-DGTEST_INCLUDE_DIR=${gtest.src}/googletest/include"
-  ];
-
-  meta = {
-    description = "A software library containing Sparse functions written in OpenCL";
-    homepage = "https://github.com/clMathLibraries/clSPARSE";
-    license = lib.licenses.asl20;
-    maintainers = with lib.maintainers; [ leixb ];
-    platforms = lib.platforms.all;
-  };
-}
--- a/pkgs/clsparse/pass_include_dir.patch
+++ b/pkgs/clsparse/pass_include_dir.patch
@@ -1,14 +0,0 @@
-diff --git a/CMakeLists.txt b/CMakeLists.txt
-index 3d139ed..b7ea2d3 100644
--- a/CMakeLists.txt
-+++ b/CMakeLists.txt
-@@ -132,6 +132,9 @@ else( )
-       set( GMOCK_ROOT "$ENV{GMOCK_ROOT}" )
-     endif( )
-     list( APPEND clSPARSE.Cmake.Args -DGTEST_ROOT=${GMOCK_ROOT} )
-+    if( DEFINED GTEST_INCLUDE_DIR )
-+      list( APPEND clSPARSE.Cmake.Args -DGTEST_INCLUDE_DIR=${GTEST_INCLUDE_DIR} )
-+    endif( )
-   endif( )
- endif( )
- 
--- a/pkgs/extrae/default.nix
+++ b/pkgs/extrae/default.nix
@@ -20,7 +20,6 @@
 #, python3Packages
 , installShellFiles
 , symlinkJoin
-, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
 }:

 let
@@ -88,7 +87,7 @@ stdenv.mkDerivation rec {
      --enable-sampling
      --with-unwind=${libunwind.dev}
      --with-xml-prefix=${libxml2.dev}
-      ${lib.optionalString enablePapi "--with-papi=${papi}"}
+      --with-papi=${papi}
      ${if (mpi != null) then ''--with-mpi=${mpi}''
        else ''--without-mpi''}
      --without-dyninst)
--- a/pkgs/gpi-2/default.nix
+++ b/pkgs/gpi-2/default.nix
@@ -34,8 +34,6 @@ stdenv.mkDerivation rec {

  enableParallelBuilding = true;

-  patches = [ ./rdma-core.patch ./max-mem.patch ];
-
  preConfigure = ''
    patchShebangs autogen.sh
    ./autogen.sh
--- a/pkgs/gpi-2/max-mem.patch
+++ b/pkgs/gpi-2/max-mem.patch
@@ -1,10 +0,0 @@
--- a/tests/tests/segments/max_mem.c	2025-09-12 13:30:53.449353591 +0200
-+++ b/tests/tests/segments/max_mem.c	2025-09-12 13:33:49.750352401 +0200
-@@ -1,5 +1,7 @@
- #include <test_utils.h>
- 
-+gaspi_size_t gaspi_get_system_mem (void);
-+
- /* Test allocates 45% of system memory and creates a segment that
-    large or if several ranks per node exist, divided among that
-    number */
--- a/pkgs/gpi-2/rdma-core.patch
+++ b/pkgs/gpi-2/rdma-core.patch
@@ -1,12 +0,0 @@
--- a/src/devices/ib/GPI2_IB.h	2025-09-12 13:25:31.564181121 +0200
-+++ b/src/devices/ib/GPI2_IB.h	2025-09-12 13:24:49.105422150 +0200
-@@ -26,6 +26,9 @@ along with GPI-2. If not, see <http://ww
- 
- #include "GPI2_Dev.h"
- 
-+/* Missing prototype as driver.h is now private */
-+int ibv_read_sysfs_file(const char *dir, const char *file, char *buf, size_t size);
-+
- #define GASPI_GID_INDEX   (0)
- #define PORT_LINK_UP      (5)
- #define MAX_INLINE_BYTES  (128)
--- a/pkgs/intel-oneapi/2023.nix
+++ b/pkgs/intel-oneapi/2023.nix
@@ -96,17 +96,14 @@ let
      "intel-oneapi-mpi-${version}"
    ];

-    nativeBuildInputs = [
-      autoPatchelfHook
-      rsync
-    ];
-
    buildInputs = [
+      rsync
      libfabric
      zlib
      stdenv.cc.cc.lib
    ];

+    nativeBuildInputs = [ autoPatchelfHook ];
    phases = [ "installPhase" "fixupPhase" ];
    dontStrip = true;
    installPhase = ''
@@ -145,6 +142,7 @@ let

    buildInputs = [
      intel-mpi
+      rsync
      libffi_3_3
      libelf
      libxml2
@@ -152,10 +150,7 @@ let
      stdenv.cc.cc.lib
    ];

-    nativeBuildInputs = [
-      autoPatchelfHook
-      rsync
-    ];
+    nativeBuildInputs = [ autoPatchelfHook ];
    phases = [ "installPhase" "fixupPhase" ];
    dontStrip = true;

@@ -185,6 +180,7 @@ let
    buildInputs = [
      intel-mpi
      intel-tbb
+      rsync
      libffi_3_3
      libelf
      libxml2
@@ -193,10 +189,7 @@ let
      stdenv.cc.cc.lib
    ];

-    nativeBuildInputs = [
-      autoPatchelfHook
-      rsync
-    ];
+    nativeBuildInputs = [ autoPatchelfHook ];
    phases = [ "installPhase" "fixupPhase" ];
    dontStrip = true;

@@ -249,6 +242,7 @@ let
    buildInputs = [
      intel-mpi
      intel-compiler-shared
+      rsync
      libffi_3_3
      libelf
      libxml2
@@ -256,10 +250,7 @@ let
      stdenv.cc.cc.lib
    ];

-    nativeBuildInputs = [
-      autoPatchelfHook
-      rsync
-    ];
+    nativeBuildInputs = [ autoPatchelfHook ];

    phases = [ "installPhase" "fixupPhase" ];

@@ -308,6 +299,9 @@ let
      "intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic-common-${version}"
      "intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic-runtime-${version}"
      "intel-oneapi-compiler-dpcpp-cpp-classic-fortran-shared-runtime-${version}"
+      "intel-oneapi-compiler-shared-${version}"
+      "intel-oneapi-compiler-shared-common-${version}"
+      "intel-oneapi-compiler-shared-runtime-${version}"
    ];
    dontCheckForBrokenSymlinks = true;
    # From https://aur.archlinux.org/packages/intel-oneapi-compiler:
@@ -325,15 +319,16 @@ let
    # - intel-oneapi-compiler-fortran-common-2023.0.0-2023.0.0-25370_all.deb
    # - intel-oneapi-compiler-fortran-runtime-2023.0.0-2023.0.0-25370_amd64.deb
    # - intel-oneapi-compiler-fortran-runtime-2023.0.0-25370_amd64.deb
-    # - intel-oneapi-compiler-shared-2023.0.0-2023.0.0-25370_amd64.deb
-    # - intel-oneapi-compiler-shared-common-2023.0.0-2023.0.0-25370_all.deb
-    # - intel-oneapi-compiler-shared-runtime-2023.0.0-2023.0.0-25370_amd64.deb
+    # + intel-oneapi-compiler-shared-2023.0.0-2023.0.0-25370_amd64.deb
+    # + intel-oneapi-compiler-shared-common-2023.0.0-2023.0.0-25370_all.deb
+    # + intel-oneapi-compiler-shared-runtime-2023.0.0-2023.0.0-25370_amd64.deb
    # - intel-oneapi-dpcpp-cpp-2023.0.0-2023.0.0-25370_amd64.deb
    # - intel-oneapi-openmp-2023.0.0-2023.0.0-25370_amd64.deb
    # - intel-oneapi-openmp-common-2023.0.0-2023.0.0-25370_all.deb

    buildInputs = [
      intel-compiler-shared
+      rsync
      libffi_3_3
      libelf
      libxml2
@@ -341,10 +336,7 @@ let
      stdenv.cc.cc.lib
    ];

-    nativeBuildInputs = [
-      autoPatchelfHook
-      rsync
-    ];
+    nativeBuildInputs = [ autoPatchelfHook ];
    autoPatchelfIgnoreMissingDeps = [ "libtbb.so.12" "libtbbmalloc.so.2" "libze_loader.so.1" ];

    phases = [ "installPhase" "fixupPhase" ];
@@ -396,6 +388,15 @@ let
        echo "-L${intel-compiler-shared}/lib" >> $out/nix-support/cc-ldflags
        echo "-L${cc}/lib" >> $out/nix-support/cc-ldflags

+        echo "--gcc-toolchain=${mygcc.cc}" >> $out/nix-support/libcxx-cxxflags
+
+        for dir in ${mygcc.cc}/include/c++/*; do
+          echo "-isystem $dir" >> $out/nix-support/libcxx-cxxflags
+        done
+        for dir in ${mygcc.cc}/include/c++/*/${targetConfig}; do
+          echo "-isystem $dir" >> $out/nix-support/libcxx-cxxflags
+        done
+
        # Need the gcc in the path
        # FIXME: We should find a better way to modify the PATH instead of using
        # this ugly hack. See https://jungle.bsc.es/git/rarias/bscpkgs/issues/9
--- a/pkgs/intel-oneapi/patch_intel.nix
+++ b/pkgs/intel-oneapi/patch_intel.nix
@@ -5,7 +5,7 @@
 , autoPatchelfHook
 , wrapCCWith
 , overrideCC
-, gcc13
+, gcc
 , hwloc
 , libelf
 , libffi_3_3
@@ -33,8 +33,6 @@ makeOverridable (
 let
  inherit (builtins) attrValues filter mapAttrs removeAttrs;

-  gcc = gcc13;
-
  __components = removeAttrs components ["extraPackages"];
  _components = __components;
  # _components = lib.traceSeqN 2 {
@@ -48,25 +46,14 @@ let
    in (wrapCCWith {
      inherit cc;
      extraBuildCommands = ''
+        echo "-isystem ${cc}/include" >> $out/nix-support/cc-cflags
+        echo "-isystem ${cc}/include/intel64" >> $out/nix-support/cc-cflags
+
        echo "-L${gcc.cc}/lib/gcc/${targetConfig}/${gcc.version}" >> $out/nix-support/cc-ldflags
        echo "-L${gcc.cc.lib}/lib" >> $out/nix-support/cc-ldflags
        echo "-L${cc}/lib" >> $out/nix-support/cc-ldflags

-        # echo "--gcc-toolchain=${gcc.cc}" >> $out/nix-support/libcxx-cxxflags
-        echo "--gcc-toolchain=${gcc.cc}" >> $out/nix-support/cc-cflags
-
-        # For some reason, If we don't resolve the realpath things go wrong
-        for stddef in ${cc}/lib/clang/*/include/stddef.h ; do
-          dir=$(dirname $(realpath "$stddef"))
-          echo "-isystem $dir" >> $out/nix-support/cc-cflags
-        done
-
-        echo "-isystem ${cc}/include" >> $out/nix-support/cc-cflags
-        echo "-isystem ${cc}/include/intel64" >> $out/nix-support/cc-cflags
-
-        for dir in ${gcc.cc}/lib/gcc/${targetConfig}/*/include; do
-          echo "-isystem $dir" >> $out/nix-support/cc-cflags
-        done
+        echo "--gcc-toolchain=${gcc.cc}" >> $out/nix-support/libcxx-cxxflags

        for dir in ${gcc.cc}/include/c++/*; do
          echo "-isystem $dir" >> $out/nix-support/libcxx-cxxflags
@@ -75,12 +62,18 @@ let
          echo "-isystem $dir" >> $out/nix-support/libcxx-cxxflags
        done

-        # FIXME: We should find a better way to modify the PATH instead of using
-        # this ugly hack. See https://jungle.bsc.es/git/rarias/bscpkgs/issues/9
-        echo 'path_backup="${gcc.cc}/bin:$path_backup"' >> $out/nix-support/cc-wrapper-hook
+        # Need the gcc in the path
+        echo 'export "PATH=${gcc}/bin:$PATH"' >> $out/nix-support/cc-wrapper-hook

        # Disable hardening by default
        echo "" > $out/nix-support/add-hardening.sh
+
+        # For some reason, If we don't resolve the realpath things go wrong
+        for stddef in ${cc}/lib/clang/*/include/stddef.h ; do
+          dir=$(dirname $(realpath "$stddef"))
+          echo "-isystem $dir" >> $out/nix-support/cc-cflags
+        done
+
      '' + extraBuildCommands;
    } // (removeAttrs args ["cc" "extraBuildCommands" "extraInstall"])
    ).overrideAttrs (old: {
@@ -113,8 +106,6 @@ stdenvNoCC.mkDerivation (finalAttrs: {

  autoPatchelfIgnoreMissingDeps = [ "libhwloc.so.5" "libcuda.so.1" "libze_loader.so.1" ];

-  dontCheckForBrokenSymlinks = true;
-
  nativeBuildInputs = [ autoPatchelfHook ];
  installPhase = ''
    cp -r $src/opt/intel/oneapi/ $out
--- a/pkgs/llvm-ompss2/clang.nix
+++ b/pkgs/llvm-ompss2/clang.nix
@@ -43,36 +43,32 @@ let

  source = if (useGit) then git else release;

-in stdenv.mkDerivation {
+in stdenv.mkDerivation rec {
  pname = "clang-ompss2";
  inherit (source) src version;

  enableParallelBuilding = true;
+  isClang = true;

  passthru = {
    CC = "clang";
    CXX = "clang++";
-
-    isClang = true;
-    isClangWithOmpss = true;
-
-    inherit gcc zlib;
  };

-  nativeBuildInputs = [
-    bash
-    cmake
-    elfutils
-    llvmPackages_latest.lld
-    pkg-config
-    python3
-    perl
-    which
-    zlib
-  ];
+  isClangWithOmpss = true;
+
+  nativeBuildInputs = [ zlib ];

  buildInputs = [
+    which
+    bash
+    python3
+    perl
+    cmake
+    llvmPackages_latest.lld
+    elfutils
    libffi
+    pkg-config
    zlib
    gcc.cc.lib # Required for libstdc++.so.6
  ];
--- a/pkgs/llvm-ompss2/default.nix
+++ b/pkgs/llvm-ompss2/default.nix
@@ -2,7 +2,6 @@
  stdenv
 , lib
 , gcc
-, gcc13
 , clangOmpss2Unwrapped
 , writeShellScript
 , openmp ? null
@@ -11,9 +10,9 @@
 , ompss2rt ? null
 }:

-let
-  inherit (lib) assertMsg optional optionalString;
+with lib;

+let
  usingNodesAndOmpv = (openmp.pname == "openmp-v" && ompss2rt.pname == "nodes");
  sameNosv = openmp.nosv == ompss2rt.nosv;
 in
@@ -38,8 +37,7 @@ let
  targetConfig = stdenv.targetPlatform.config;
  inherit gcc;
  cc = clangOmpss2Unwrapped;
-
-  gccVersion = with lib.versions; let v = gcc.version; in concatStringsSep "." [(major v) (minor v) (patch v)];
+  gccVersion = with versions; let v = gcc.version; in concatStringsSep "." [(major v) (minor v) (patch v)];

  extraBuildCommands = ''
    echo "-target ${targetConfig}" >> $out/nix-support/cc-cflags
@@ -47,6 +45,9 @@ let
    echo "-L${gcc.cc}/lib/gcc/${targetConfig}/${gccVersion}" >> $out/nix-support/cc-ldflags
    echo "-L${gcc.cc.lib}/lib" >> $out/nix-support/cc-ldflags

+    for dir in ${gcc.cc}/lib/gcc/${targetConfig}/*/include; do
+      echo "-isystem $dir" >> $out/nix-support/cc-cflags
+    done
    for dir in ${gcc.cc}/include/c++/*; do
      echo "-isystem $dir" >> $out/nix-support/libcxx-cxxflags
    done
@@ -94,8 +95,7 @@ let
  '';

  wrappedCCIntel = wrapCCWith {
-    inherit bintools extraPackages;
-    cc = cc.override { gcc = gcc13; }; # Intel uses gcc13, so we have to match it
+    inherit cc bintools extraPackages;
    # extraPackages adds packages to depsTargetTargetPropagated
    extraBuildCommands = intelExtraBuildCommands + envExports;
  };
--- a/pkgs/lmbench/default.nix
+++ b/pkgs/lmbench/default.nix
@@ -22,11 +22,7 @@ stdenv.mkDerivation rec {
  '';

  buildInputs = [ libtirpc ];
-  patches = [
-    ./fix-install.patch
-    ./gcc-14.patch
-    ./fix-cross.patch
-  ];
+  patches = [ ./fix-install.patch ./gcc-14.patch ];

  hardeningDisable = [ "all" ];

@@ -39,8 +35,6 @@ stdenv.mkDerivation rec {
      CFLAGS=-Wno-implicit-int
      CPPFLAGS=-I${libtirpc.dev}/include/tirpc
      LDFLAGS=-ltirpc
-      CC=${stdenv.cc.targetPrefix}cc
-      AR=${stdenv.cc.targetPrefix}ar
    )
  '';

--- a/pkgs/lmbench/fix-cross.patch
+++ b/pkgs/lmbench/fix-cross.patch
@@ -1,13 +0,0 @@
-diff --git a/src/Makefile b/src/Makefile
-index 2555014..356eeb3 100644
--- a/src/Makefile
-+++ b/src/Makefile
-@@ -36,7 +36,7 @@ SHELL=/bin/sh
- 
- CC=`../scripts/compiler`
- MAKE=`../scripts/make`
-AR=ar
-+AR?=ar
- ARCREATE=cr
- 
- # base of installation location
--- a/pkgs/mcxx/default.nix
+++ b/pkgs/mcxx/default.nix
@@ -32,20 +32,17 @@ stdenv.mkDerivation rec {

  enableParallelBuilding = true;

-  nativeBuildInputs = [
+  buildInputs = [
    autoreconfHook
-    bison
-    flex
+    nanos6
+    gperf
    python3
    gfortran
    pkg-config
-    gperf
-    gcc
-  ];
-
-  buildInputs = [
-    nanos6
    sqlite.dev
+    bison
+    flex
+    gcc
  ];

  patches = [ ./intel.patch ];
--- a/pkgs/nanos6/default.nix
+++ b/pkgs/nanos6/default.nix
@@ -16,7 +16,6 @@
 , jemallocNanos6 ? null
 , cachelineBytes ? 64
 , enableGlibcxxDebug ? false
-, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
 , useGit ? false
 , gitUrl ? "ssh://git@bscpm04.bsc.es/nanos6/nanos6"
 , gitBranch ? "master"
@@ -48,8 +47,6 @@ let
  };

  source = if (useGit) then git else release;
-
-  isCross = stdenv.hostPlatform != stdenv.buildPlatform;
 in
  stdenv.mkDerivation (source // {
    pname = "nanos6";
@@ -74,11 +71,9 @@ in
      "--disable-all-instrumentations"
      "--enable-ovni-instrumentation"
      "--with-ovni=${ovni}"
-      "--with-boost=${boost.dev}"
    ] ++
      (optional enableJemalloc "--with-jemalloc=${jemallocNanos6}") ++
-      (optional enableGlibcxxDebug "CXXFLAGS=-D_GLIBCXX_DEBUG") ++
-      (optional isCross "--with-symbol-resolution=ifunc");
+      (optional enableGlibcxxDebug "CXXFLAGS=-D_GLIBCXX_DEBUG");

    postConfigure = lib.optionalString (!enableDebug) ''
      # Disable debug
@@ -93,29 +88,23 @@ in
    dontStrip = enableDebug;
    separateDebugInfo = true;

-    nativeBuildInputs = [
+    buildInputs = [
      autoconf
      automake
      libtool
      pkg-config
-
-      # TODO: papi_version is needed for configure:
-      # ./configure: line 27378: papi_version: command not found
-      # This probably breaks cross-compilation
-    ] ++ lib.optionals enablePapi [ papi ];
-
-    buildInputs = [
      boost
      numactl
      hwloc
+      papi
      ovni
-    ] ++ lib.optionals enablePapi [ papi ];
+    ];

    # Create a script that sets NANOS6_HOME
    postInstall = ''
      mkdir -p $out/nix-support
      echo "export NANOS6_HOME=$out" >> $out/nix-support/setup-hook
-    '';
+    ''; 

    meta = with lib; {
      homepage = "https://github.com/bsc-pm/nanos6";
--- a/pkgs/nosv/default.nix
+++ b/pkgs/nosv/default.nix
@@ -6,8 +6,6 @@
 , pkg-config
 , numactl
 , hwloc
-, papi
-, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
 , cacheline ? 64 # bits
 , ovni ? null
 , useGit ? false
@@ -58,5 +56,5 @@ in
      numactl
      hwloc
      ovni
-    ] ++ lib.optionals enablePapi [ papi ];
+    ];
  }
--- a/pkgs/osu/default.nix
+++ b/pkgs/osu/default.nix
@@ -24,10 +24,9 @@ stdenv.mkDerivation rec {

  doCheck = true;
  enableParallelBuilding = true;
-  nativeBuildInputs = [ mpiAll ];
  buildInputs = [ mpiAll ];
  hardeningDisable = [ "all" ];
-  configureFlags = [
+  configureFlags = [ 
      "CC=mpicc"
      "CXX=mpicxx"
  ];
@@ -41,7 +40,7 @@ stdenv.mkDerivation rec {

  meta = {
    description = "OSU Micro-Benchmarks";
-    homepage = "http://mvapich.cse.ohio-state.edu/benchmarks/";
+    homepage = http://mvapich.cse.ohio-state.edu/benchmarks/;
    maintainers = [ ];
    platforms = lib.platforms.all;
  };
--- a/pkgs/ovni/default.nix
+++ b/pkgs/ovni/default.nix
@@ -13,6 +13,8 @@
 , useMpi ? (stdenv.buildPlatform.canExecute stdenv.hostPlatform)
 }:

+with lib;
+
 let
  release = rec {
    version = "1.12.0";
@@ -43,7 +45,7 @@ in
    postPatch = ''
      patchShebangs --build test/
    '';
-    nativeBuildInputs = [ cmake ] ++ lib.optionals (useMpi) [ mpi ];
+    nativeBuildInputs = [ cmake ];
    buildInputs = lib.optionals (useMpi) [ mpi ];
    cmakeBuildType = if (enableDebug) then "Debug" else "Release";
    cmakeFlags = [
--- a/pkgs/paraver/default.nix
+++ b/pkgs/paraver/default.nix
@@ -1,7 +1,7 @@
-{ stdenv
-, fetchFromGitHub
+{
+  stdenv
 , autoreconfHook
-, boost
+, boost186
 , libxml2
 , xml2
 , wxGTK32
@@ -11,32 +11,23 @@
 , openssl
 , glibcLocales
 , wrapGAppsHook
-
-, enableDebug ? false
 }:

 let
  wx = wxGTK32;
-  version = "4.12.0";
+  boost = boost186;
 in
-stdenv.mkDerivation {
+stdenv.mkDerivation rec {
  pname = "wxparaver";
-  inherit version;
+  version = "4.11.2";

-  src = fetchFromGitHub {
-    owner = "bsc-performance-tools";
-    repo = "wxparaver";
-    rev = "v${version}";
-    sha256 = "sha256-YsO5gsuEFQdki3lQudEqgo5WXOt/fPdvNw5OxZQ86Zo=";
+  src = builtins.fetchGit {
+    url = "https://github.com/bsc-performance-tools/wxparaver.git";
+    rev = "129e6b4a4f061e5a319049db8db1620f5de3bd70"; # v4.11.2 (missing tag)
+    ref = "master";
  };

-  patches = [
-    ./do-not-steal-focus-on-redraw.patch
-
-    # Fix for boost >=1.87 (thanks to gamezelda)
-    # https://aur.archlinux.org/cgit/aur.git/commit/?h=wxparaver&id=b0dcd08c472536e0a1a3cc1dfbc4c77d9f5e0d47
-    ./fix-boost-87.patch
-  ];
+  hardeningDisable = [ "all" ];

  # Fix the PARAVER_HOME variable
  postPatch = ''
@@ -44,20 +35,13 @@ stdenv.mkDerivation {
    sed -i '1aexport LOCALE_ARCHIVE="${glibcLocales}/lib/locale/locale-archive"' docs/wxparaver
  '';

+  dontStrip = true;
  enableParallelBuilding = true;

-  hardeningDisable = [ "all" ];
-
-  dontStrip = true;
-
-  env =
-    let
-      flags = if enableDebug then "-ggdb -Og" else "-O3";
-    in
-    {
-      CFLAGS = flags;
-      CXXFLAGS = flags;
-    };
+  preConfigure = ''
+    export CFLAGS="-O3"
+    export CXXFLAGS="-O3"
+  '';

  configureFlags = [
    "--with-boost=${boost}"
@@ -67,19 +51,19 @@ stdenv.mkDerivation {
  ];

  nativeBuildInputs = [
-    autoconf
-    automake
-    autoreconfHook
    wrapGAppsHook
  ];

  buildInputs = [
+    autoreconfHook
    boost
-    libxml2
+    libxml2.dev
    xml2
    wx
+    autoconf
+    automake
    paraverKernel
-    openssl
+    openssl.dev
  ];

  postInstall = ''
--- a/pkgs/paraver/do-not-steal-focus-on-redraw.patch
+++ b/pkgs/paraver/do-not-steal-focus-on-redraw.patch
@@ -1,26 +0,0 @@
-From 2b185e1b5ce52808b3026334851dbcd5a640ed4d Mon Sep 17 00:00:00 2001
-From: aleixbonerib <aleix.boneribo@bsc.es>
-Date: Mon, 10 Jun 2024 20:59:45 +0200
-Subject: [PATCH] fix: do not set focus on redraw
-
-Some wm can change the window size without focusing. Right now, when the
-plot is resized it takes back focus.
---
- src/gtimeline.cpp | 1 -
- 1 file changed, 1 deletion(-)
-
-diff --git a/src/gtimeline.cpp b/src/gtimeline.cpp
-index 23ebef2..a896066 100644
--- a/src/gtimeline.cpp
-+++ b/src/gtimeline.cpp
-@@ -899,7 +899,6 @@ void gTimeline::redraw()
- 
-   drawZone->Refresh();
- 
-  SetFocus();
- }
- 
- 
-- 
-2.44.1
-
--- a/pkgs/paraver/dont-expand-colors.patch
+++ b/pkgs/paraver/dont-expand-colors.patch
@@ -11,7 +11,7 @@ diff --git a/api/semanticcolor.cpp b/api/semanticcolor.cpp
 index 9f86960..22859eb 100644
 --- a/api/semanticcolor.cpp
 +++ b/api/semanticcolor.cpp
-@@ -295,8 +295,9 @@ rgb SemanticColor::getColor( PRV_UINT32 pos ) const
+@@ -232,8 +232,9 @@ rgb CodeColor::getColor( PRV_UINT32 pos ) const
 {
   if( pos == 0 && ParaverConfig::getInstance()->getColorsTimelineUseZero() )
     return ParaverConfig::getInstance()->getColorsTimelineColorZero();
@@ -22,26 +22,26 @@ index 9f86960..22859eb 100644
 +  return colors[ pos + 1 ];
 }
 
- void SemanticColor::setColor( PRV_UINT32 whichPos, rgb whichColor )
-@@ -314,6 +315,12 @@ void SemanticColor::setColor( PRV_UINT32 whichPos, rgb whichColor )
+ void CodeColor::setColor( PRV_UINT32 whichPos, rgb whichColor )
+@@ -250,6 +251,12 @@ void CodeColor::setColor( PRV_UINT32 whichPos, rgb whichColor )
   colors[ whichPos ] = whichColor;
 }
 
-+void SemanticColor::cutAfter( PRV_UINT32 pos )
+void CodeColor::cutAfter( PRV_UINT32 pos )
 +{
 +  if ( pos < colors.size() )
 +    colors.erase( colors.begin() + pos, colors.end() );
 +}
 +
- void SemanticColor::setCustomColor( TSemanticValue whichValue, rgb color ) 
+ void CodeColor::setCustomColor( TSemanticValue whichValue, rgb color ) 
 {
   customPalette[ whichValue ] = color;
 diff --git a/api/semanticcolor.h b/api/semanticcolor.h
 index a079556..bddf3d8 100644
 --- a/api/semanticcolor.h
 +++ b/api/semanticcolor.h
-@@ -114,6 +114,7 @@ class SemanticColor
-     // Code Color methods
+@@ -98,6 +98,7 @@ class CodeColor: public SemanticColor
+ 
     PRV_UINT32 getNumColors() const;
     void setColor( PRV_UINT32 pos, rgb color );
 +    void cutAfter( PRV_UINT32 pos );
@@ -61,7 +61,7 @@ index b0d2050..ee2ab69 100644
   for ( auto it : semanticColors )
   {
     std::tie( tmpColor.red, tmpColor.green, tmpColor.blue ) = it.second;
-     mySemanticColor.setColor( it.first, tmpColor );
+     myCodeColor.setColor( it.first, tmpColor );
 +	if (it.first > maxValue)
 +      maxValue = it.first;
   }
@@ -69,7 +69,7 @@ index b0d2050..ee2ab69 100644
 +  // Cut the palette after the highest defined value, so there are no
 +  // extra expanded values
 +  if ( !pcfParser.expandColors )
-+	mySemanticColor.cutAfter(maxValue);
+	myCodeColor.cutAfter(maxValue);
 +
   myEventLabels = EventLabels( pcfParser );
   myStateLabels = StateLabels( pcfParser );
--- a/pkgs/paraver/fix-boost-87.patch
+++ b/pkgs/paraver/fix-boost-87.patch
@@ -1,87 +0,0 @@
-From 7ecd888e2ebb9e8c5582851d3c50bff61022708e Mon Sep 17 00:00:00 2001
-From: =?UTF-8?q?Joan=20Bruguera=20Mic=C3=B3?= <joanbrugueram@gmail.com>
-Date: Sat, 29 Mar 2025 18:14:25 +0000
-Subject: [PATCH] tutorialsdownload: Fix Boost ASIO 1.87.0 removals
-
---
- src/tutorialsdownload.cpp | 25 ++++++++++++-------------
- 1 file changed, 12 insertions(+), 13 deletions(-)
-
-diff --git a/src/tutorialsdownload.cpp b/src/tutorialsdownload.cpp
-index a1921fd..6ce9dc2 100644
--- a/src/tutorialsdownload.cpp
-+++ b/src/tutorialsdownload.cpp
-@@ -121,13 +121,13 @@ void TutorialsProgress::updateInstall( int whichValue )
- class client
- {
-   public:
-    client( boost::asio::io_service& io_service,
-+    client( boost::asio::io_context& io_context,
-             boost::asio::ssl::context& context,
-             const std::string& server, const std::string& path,
-             ofstream& storeFile,
-             TutorialsProgress *progress )
-            : resolver_( io_service ),
-              socket_( io_service, context ),
-+            : resolver_( io_context ),
-+              socket_( io_context, context ),
-               store_( storeFile ),
-               progress_( progress )
-     {
-@@ -143,8 +143,7 @@ class client
- 
-         // Start an asynchronous resolve to translate the server and service names
-         // into a list of endpoints.
-        tcp::resolver::query query( server, "https" );
-        resolver_.async_resolve( query,
-+        resolver_.async_resolve( server, "https",
-                                  boost::bind( &client::handle_resolve,
-                                               this,
-                                               boost::asio::placeholders::error,
-@@ -154,7 +153,7 @@ class client
-   private:
- 
-     void handle_resolve( const boost::system::error_code& err,
-                         tcp::resolver::iterator endpoint_iterator )
-+                         const tcp::resolver::results_type& endpoints )
-     {
-       if ( !err )
-       {
-@@ -162,7 +161,7 @@ class client
-         socket_.set_verify_callback( boost::bind( &client::verify_certificate, this, _1, _2 ) );
- 
-         boost::asio::async_connect( socket_.lowest_layer(), 
-                                    endpoint_iterator,
-+                                    endpoints,
-                                     boost::bind( &client::handle_connect, 
-                                                  this,
-                                                  boost::asio::placeholders::error ) );
-@@ -536,9 +535,9 @@ bool TutorialsDownload::downloadTutorialsList() const
-     boost::asio::ssl::context ctx( boost::asio::ssl::context::sslv23 );
-     ctx.set_default_verify_paths();
- 
-    boost::asio::io_service io_service;
-    client c( io_service, ctx, server, path, storeFile, nullptr );
-    io_service.run();
-+    boost::asio::io_context io_context;
-+    client c( io_context, ctx, server, path, storeFile, nullptr );
-+    io_context.run();
- 
-     doneDownload = true;
-   }
-@@ -580,9 +579,9 @@ bool TutorialsDownload::download( const TutorialData& whichTutorial, string& tut
-     boost::asio::ssl::context ctx( boost::asio::ssl::context::sslv23 );
-     ctx.set_default_verify_paths();
- 
-    boost::asio::io_service io_service;
-    client c( io_service, ctx, std::string( server.mb_str() ), std::string( path.mb_str() ), storeFile, &progress );
-    io_service.run();
-+    boost::asio::io_context io_context;
-+    client c( io_context, ctx, std::string( server.mb_str() ), std::string( path.mb_str() ), storeFile, &progress );
-+    io_context.run();
-   }
-   catch ( ParaverKernelException& e )
-   {
-- 
-2.49.0
-
--- a/pkgs/paraver/fix-libxml2-deprecation.patch
+++ b/pkgs/paraver/fix-libxml2-deprecation.patch
@@ -1,23 +0,0 @@
-commit 60aa3ffa05f6b40db191a880e9e622d608744c1f
-Author: Aleix Boné <aleix.boneribo@bsc.es>
-Date:   Sun Jul 21 12:11:30 2025 +0200
-
-    fix libxml2 deprecated macro
-
-diff --git a/configure.ac b/configure.ac
-index 7fe1876..3ce1091 100644
--- a/configure.ac
-+++ b/configure.ac
-@@ -46,7 +46,10 @@ AC_PROG_CPP
- AC_PROG_CXXCPP
- AC_PROG_SED
- 
-AM_PATH_XML2
-+PKG_PROG_PKG_CONFIG
-+PKG_CHECK_MODULES([XML], [libxml-2.0])
-+
-+AC_SUBST(XML_CPPFLAGS, $XML_CFLAGS)
- 
- AX_BOOST_BASE(1.36)
- AX_BOOST_SERIALIZATION
-
--- a/pkgs/paraver/kernel.nix
+++ b/pkgs/paraver/kernel.nix
@@ -1,36 +1,32 @@
-{ stdenv
-, fetchFromGitHub
+{
+  stdenv
 , autoreconfHook
 , boost
 , libxml2
 , xml2
+, wxGTK32
 , autoconf
 , automake
 , pkg-config
 , zlib
-
-, enableDebug ? false
 }:

 let
-  version = "4.12.0";
+  wx = wxGTK32;
 in
-stdenv.mkDerivation {
+stdenv.mkDerivation rec {
  pname = "paraver-kernel";
-  inherit version;
+  version = "${src.shortRev}";

-  src = fetchFromGitHub {
-    owner = "bsc-performance-tools";
-    repo = "paraver-kernel";
-    rev = "v${version}";
-    sha256 = "sha256-Xs7g8ITZhPt00v7o2WlTddbou8C8Rc9kBMFpl2WsCS4=";
+  src = builtins.fetchGit {
+    url = "https://github.com/bsc-performance-tools/paraver-kernel.git";
+    rev = "2e167da3cee78ca11e31b74faefb23f12bac2b8c"; # master (missing tag)
+    ref = "master";
  };

  patches = [
    # https://github.com/bsc-performance-tools/paraver-kernel/pull/11
-    # TODO: add this back if it's still relevant
-    # ./dont-expand-colors.patch
-    ./fix-libxml2-deprecation.patch
+    ./dont-expand-colors.patch
  ];

  hardeningDisable = [ "all" ];
@@ -38,31 +34,24 @@ stdenv.mkDerivation {

  dontStrip = true;

-  env =
-    let
-      flags = "-DPARALLEL_ENABLED " + (if enableDebug then "-ggdb -Og" else "-O3");
-    in
-    {
-      CFLAGS = flags;
-      CXXFLAGS = flags;
-    };
+  preConfigure = ''
+    export CFLAGS="-O3 -DPARALLEL_ENABLED"
+    export CXXFLAGS="-O3 -DPARALLEL_ENABLED"
+  '';

  configureFlags = [
    "--with-boost=${boost}"
    "--enable-openmp"
  ];

-  nativeBuildInputs = [
-    autoreconfHook
-    autoconf
-    automake
-    pkg-config
-  ];
-
  buildInputs = [
+    autoreconfHook
    boost
    libxml2.dev
    xml2
+    autoconf
+    automake
+    pkg-config
    zlib
  ];
 }
--- a/pkgs/paraver/release.nix
+++ b/pkgs/paraver/release.nix
@@ -61,16 +61,13 @@ stdenv.mkDerivation rec {
    "--with-wx-config=${wx}/bin/wx-config"
  ];

-  nativeBuildInputs = [
-    autoconf
-    automake
-  ];
-
  buildInputs = [
    boost
    xml2
    libxml2.dev
    wx
+    autoconf
+    automake
    openssl.dev
  ];

--- a/pkgs/sonar/default.nix
+++ b/pkgs/sonar/default.nix
@@ -18,12 +18,8 @@ stdenv.mkDerivation rec {
  hardeningDisable = [ "all" ];
  dontStrip = true;
  configureFlags = [ "--with-ovni=${ovni}" ];
-
-  nativeBuildInputs = [
-    autoreconfHook
-  ];
-
  buildInputs = [
+    autoreconfHook
    ovni
    mpi
  ];
--- a/pkgs/tacuda/default.nix
+++ b/pkgs/tacuda/default.nix
@@ -1,68 +0,0 @@
-{ stdenv
-, fetchFromGitHub
-, automake
-, autoconf
-, libtool
-, gnumake
-, autoreconfHook
-, boost
-, cudaPackages
-
-, useGit ? false
-, gitUrl ? "git@gitlab-internal.bsc.es:task-awareness/tacuda/tacuda.git"
-, gitBranch ? "main"
-, gitCommit ? "35234f9445e6149a2bd38d119841e2485d6ee05e"
-}:
-
-let
-
-  release_ver = "2.1.0";
-  release = {
-    version = release_ver;
-    src = fetchFromGitHub {
-      owner = "bsc-pm";
-      repo = "tacuda";
-      rev = release_ver;
-      hash = "sha256-Cj3EiLVJSLvRv0ydeg7Vp4SpkniEqHkcWF+YOJQ8EcM=";
-    };
-  };
-
-  git = rec {
-    version = src.shortRev;
-    src = builtins.fetchGit {
-      url = gitUrl;
-      ref = gitBranch;
-      rev = gitCommit;
-    };
-  };
-
-  source = if (useGit) then git else release;
-
-in
-
-stdenv.mkDerivation {
-  pname = "tacuda";
-  inherit (source) src version;
-
-  enableParallelBuilding = true;
-  separateDebugInfo = true;
-
-  nativeBuildInputs = [
-    autoreconfHook
-    automake
-    autoconf
-    libtool
-    gnumake
-  ];
-
-  patches = [ ./fix_config.patch ];
-
-  configureFlags = [ "--with-cuda-include=${cudaPackages.cudatoolkit}/include" ];
-
-  buildInputs = [
-    boost
-    cudaPackages.libcublas
-    cudaPackages.cuda_cudart
-  ];
-
-}
--- a/pkgs/tacuda/fix_config.patch
+++ b/pkgs/tacuda/fix_config.patch
@@ -1,13 +0,0 @@
-diff --git a/m4/cuda.m4 b/m4/cuda.m4
-index 23f5c94..8f9b534 100644
--- a/m4/cuda.m4
-+++ b/m4/cuda.m4
-@@ -40,7 +40,7 @@ search_libs="cuda cublas cudart"
- required_libs=""
- 
- m4_foreach([function],
-           [cuInit,
-+           [
- 	    cublasSgemm,
-             cudaStreamCreate,
-             cudaLaunchKernel,
--- a/pkgs/tampi/default.nix
+++ b/pkgs/tampi/default.nix
@@ -8,6 +8,7 @@
 , gnumake
 , boost
 , mpi
+, gcc
 , autoreconfHook
 , enableOvni ? true
 , ovni ? null
@@ -40,23 +41,20 @@ let
    };
  };
  source = if (useGit) then git else release;
-in stdenv.mkDerivation {
+in stdenv.mkDerivation rec {
  pname = "tampi";
  inherit (source) src version;
  enableParallelBuilding = true;
  separateDebugInfo = true;
-
-  nativeBuildInputs = [
-    autoconf
-    automake
-    autoreconfHook
-    gnumake
-    libtool
-  ];
-
  buildInputs = [
+    autoreconfHook
+    automake
+    autoconf
+    libtool
+    gnumake
    boost
    mpi
+    gcc
  ] ++ optional (enableOvni) ovni;
  configureFlags = optional (enableOvni) "--with-ovni=${ovni}";
  dontDisableStatic = true;
--- a/pkgs/taopencl/default.nix
+++ b/pkgs/taopencl/default.nix
@@ -1,46 +0,0 @@
-{
-  stdenv
-, automake
-, autoconf
-, libtool
-, gnumake
-, boost
-, mpi
-, gcc
-, autoreconfHook
-, ocl-icd
-, opencl-headers
-}:
-
-stdenv.mkDerivation (finalAttrs: {
-  pname = "taopencl";
-  version = finalAttrs.src.shortRev;
-
-  src = builtins.fetchGit {
-    url = "git@gitlab-internal.bsc.es:task-awareness/taopencl/taopencl.git";
-    ref = "master";
-    rev = "c3b7b32ae8fa4af7ceff598532a881f8f1490aaf";
-  };
-
-  enableParallelBuilding = true;
-  separateDebugInfo = true;
-
-  configureFlags = [
-    "--with-opencl-lib=${ocl-icd}/lib"
-    "--with-opencl-include=${opencl-headers}/include"
-  ];
-
-  buildInputs = [
-    autoreconfHook
-    automake
-    autoconf
-    libtool
-    gnumake
-    boost
-    mpi
-    gcc
-  ];
-
-  dontDisableStatic = true;
-  hardeningDisable = [ "all" ];
-})
Author	SHA1	Message	Date
Aleix Boné	f809c65bd0	Add passthru in ompss2 wrapper for icpx compat	2025-07-21 18:18:47 +02:00
Aleix Boné	caac03cec5	Update onemath v0.8	2025-07-21 18:18:47 +02:00
Aleix Boné	9519a6bacc	Remove deprecation warnings in sycl test	2025-07-21 18:18:47 +02:00
Aleix Boné	6b430a5a3f	Remove wrapper flags when clang called from intel	2025-07-21 18:18:47 +02:00
Aleix Boné	9143b335c3	llvm: add include cc	2025-07-21 18:18:47 +02:00
Aleix Boné	801a9f20d9	Simplify findMatch in intel-oneapi 2023 This should be a noop	2025-07-21 18:18:47 +02:00
Aleix Boné	95ad400991	Fix parsing of new apt package list for oneapi 2023 New apt list does not have Package: as the first entry for all packages	2025-07-21 18:18:47 +02:00
Aleix Boné	b90f4ccbe8	Add oneMath	2025-07-21 18:18:46 +02:00
Aleix Boné	f9aa83dc47	Introduce intel oneapi 202{4,5} and make 2025 the default intelPackages	2025-07-21 18:18:46 +02:00
Aleix Boné	2b646706ca	tasycl: init at 2.1.0	2025-07-21 18:18:46 +02:00
Aleix Boné	b8c97e7abb	Add test for icpx with ompss-2 as host compiler	2025-07-21 18:15:50 +02:00
Aleix Boné	762a455589	Add SYCL test compilation	2025-07-21 18:15:50 +02:00
Aleix Boné	5869ad06c2	Add alias intelPackages -> intelPackages_2023	2025-07-21 18:15:50 +02:00
Aleix Boné	7d1a312e7d	Fix sycl intel-oneapi-compiler	2025-07-21 18:15:49 +02:00