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8 Commits

30 changed files with 106 additions and 142 deletions

8
flake.lock generated
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@@ -2,16 +2,16 @@
"nodes": {
"nixpkgs": {
"locked": {
"lastModified": 1767634882,
"narHash": "sha256-2GffSfQxe3sedHzK+sTKlYo/NTIAGzbFCIsNMUPAAnk=",
"lastModified": 1752436162,
"narHash": "sha256-Kt1UIPi7kZqkSc5HVj6UY5YLHHEzPBkgpNUByuyxtlw=",
"owner": "NixOS",
"repo": "nixpkgs",
"rev": "3c9db02515ef1d9b6b709fc60ba9a540957f661c",
"rev": "dfcd5b901dbab46c9c6e80b265648481aafb01f8",
"type": "github"
},
"original": {
"owner": "NixOS",
"ref": "nixos-25.11",
"ref": "nixos-25.05",
"repo": "nixpkgs",
"type": "github"
}

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@@ -1,6 +1,6 @@
{
inputs = {
nixpkgs.url = "github:NixOS/nixpkgs/nixos-25.11";
nixpkgs.url = "github:NixOS/nixpkgs/nixos-25.05";
};
outputs = { self, nixpkgs, ... }:

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@@ -24,7 +24,7 @@
address = "10.0.40.40";
prefixLength = 24;
} ];
interfaces.ibs785.ipv4.addresses = [ {
interfaces.ibp5s0.ipv4.addresses = [ {
address = "10.0.42.40";
prefixLength = 24;
} ];

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@@ -4,6 +4,13 @@
# Use the GRUB 2 boot loader.
boot.loader.grub.enable = true;
# Enable GRUB2 serial console
boot.loader.grub.extraConfig = ''
serial --unit=0 --speed=115200 --word=8 --parity=no --stop=1
terminal_input --append serial
terminal_output --append serial
'';
boot.kernel.sysctl = {
"kernel.perf_event_paranoid" = lib.mkDefault "-1";

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@@ -1,10 +1,10 @@
{ pkgs, ... }:
{ pkgs, config, ... }:
{
environment.systemPackages = with pkgs; [
vim wget git htop tmux pciutils tcpdump ripgrep nix-index nixos-option
nix-diff ipmitool freeipmi ethtool lm_sensors cmake gnumake file tree
ncdu perf ldns pv
ncdu config.boot.kernelPackages.perf ldns pv
# From jungle overlay
osumb nixgen
];

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@@ -5,5 +5,5 @@
boot.kernelModules = [ "ipmi_watchdog" ];
# Enable systemd watchdog with 30 s interval
systemd.settings.Manager.RuntimeWatchdogSec = 30;
systemd.watchdog.runtimeTime = "30s";
}

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@@ -11,11 +11,4 @@
"console=tty1"
"console=ttyS0,115200"
];
# Enable GRUB2 serial console
boot.loader.grub.extraConfig = ''
serial --unit=0 --speed=115200 --word=8 --parity=no --stop=1
terminal_input --append serial
terminal_output --append serial
'';
}

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@@ -1,6 +1,11 @@
{ pkgs, lib, ... }:
{ config, pkgs, lib, ... }:
{
# add the perf tool
environment.systemPackages = with pkgs; [
config.boot.kernelPackages.perf
];
# allow non-root users to read tracing data from the kernel
boot.kernel.sysctl."kernel.perf_event_paranoid" = -2;
boot.kernel.sysctl."kernel.kptr_restrict" = 0;

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@@ -3,13 +3,13 @@
{
imports = [
../common/base.nix
../common/xeon/console.nix
../module/amd-uprof.nix
../module/emulation.nix
../module/nvidia.nix
../module/slurm-client.nix
../module/hut-substituter.nix
./wireguard.nix
./serial-console.nix
];
# Don't turn off on August as UPC has different dates.
@@ -19,9 +19,6 @@
# Select the this using the ID to avoid mismatches
boot.loader.grub.device = "/dev/disk/by-id/wwn-0x500a07514b0c1103";
# Increase time so we can boot other entries
boot.loader.timeout = 60;
# No swap, there is plenty of RAM
swapDevices = lib.mkForce [];
@@ -34,10 +31,7 @@
# Use performance for benchmarks
powerManagement.cpuFreqGovernor = "performance";
# Enable amd-uprof in >= 6.15 kernels only
services.amd-uprof.enable =
let ver = config.boot.kernelPackages.kernel.version;
in (lib.strings.compareVersions ver "6.15") >= 0;
services.amd-uprof.enable = true;
# Disable NUMA balancing
boot.kernel.sysctl."kernel.numa_balancing" = 0;
@@ -48,11 +42,6 @@
# Disable NMI watchdog to save one hw counter (for AMD uProf)
boot.kernel.sysctl."kernel.nmi_watchdog" = 0;
specialisation.oldKernel.configuration = {
system.nixos.tags = [ "old-kernel" ];
boot.kernelPackages = lib.mkForce pkgs.linuxPackages_6_12;
};
services.openssh.settings.X11Forwarding = true;
services.fail2ban.enable = true;

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@@ -1,21 +0,0 @@
{
# Restart the serial console
systemd.services."serial-getty@ttyS1" = {
enable = true;
wantedBy = [ "getty.target" ];
serviceConfig.Restart = "always";
};
# Enable serial console
boot.kernelParams = [
"console=tty1"
"console=ttyS1,115200"
];
# Enable GRUB2 serial console
boot.loader.grub.extraConfig = ''
serial --unit=1 --speed=115200 --word=8 --parity=no --stop=1
terminal_input --append serial
terminal_output --append serial
'';
}

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@@ -45,7 +45,7 @@
address = "10.0.40.7";
prefixLength = 24;
} ];
interfaces.ibs785.ipv4.addresses = [ {
interfaces.ibp5s0.ipv4.addresses = [ {
address = "10.0.42.7";
prefixLength = 24;
} ];

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@@ -46,7 +46,7 @@
address = "10.0.40.42";
prefixLength = 24;
} ];
interfaces.ibs785.ipv4.addresses = [ {
interfaces.ibp5s0.ipv4.addresses = [ {
address = "10.0.42.42";
prefixLength = 24;
} ];

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@@ -1,10 +1,3 @@
{
services.nixseparatedebuginfod2 = {
enable = true;
substituters = [
"local:"
"https://cache.nixos.org"
"http://hut/cache"
];
};
services.nixseparatedebuginfod.enable = true;
}

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@@ -20,7 +20,7 @@
address = "10.0.40.1";
prefixLength = 24;
} ];
interfaces.ibs785.ipv4.addresses = [ {
interfaces.ibp5s0.ipv4.addresses = [ {
address = "10.0.42.1";
prefixLength = 24;
} ];

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@@ -21,7 +21,7 @@
prefixLength = 24;
} ];
# Watch out! The OmniPath device is not in the same place here:
interfaces.ibs801.ipv4.addresses = [ {
interfaces.ibp129s0.ipv4.addresses = [ {
address = "10.0.42.2";
prefixLength = 24;
} ];

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@@ -4,7 +4,6 @@
imports = [
../common/base.nix
../common/ssf/hosts.nix
../common/xeon/console.nix
../module/emulation.nix
../module/debuginfod.nix
../module/nvidia.nix

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@@ -27,7 +27,4 @@
};
};
};
# Allow gitea user to send mail
users.users.gitea.extraGroups = [ "mail-robot" ];
}

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@@ -12,9 +12,9 @@ let
bench6 = callPackage ./pkgs/bench6/default.nix { };
bigotes = callPackage ./pkgs/bigotes/default.nix { };
clangOmpss2 = callPackage ./pkgs/llvm-ompss2/default.nix { };
clangOmpss2Nanos6 = callPackage ./pkgs/llvm-ompss2/default.nix { ompss2rt = final.nanos6; };
clangOmpss2Nodes = callPackage ./pkgs/llvm-ompss2/default.nix { ompss2rt = final.nodes; openmp = final.openmp; };
clangOmpss2NodesOmpv = callPackage ./pkgs/llvm-ompss2/default.nix { ompss2rt = final.nodes; openmp = final.openmpv; };
clangOmpss2Nanos6 = callPackage ./pkgs/llvm-ompss2/default.nix { useNanos6 = true; };
clangOmpss2Nodes = callPackage ./pkgs/llvm-ompss2/default.nix { useNodes = true; useOpenmp = true; };
clangOmpss2NodesOmpv = callPackage ./pkgs/llvm-ompss2/default.nix { useNodes = true; useOpenmpV = true; };
clangOmpss2Unwrapped = callPackage ./pkgs/llvm-ompss2/clang.nix { };
cudainfo = prev.callPackage ./pkgs/cudainfo/default.nix { };
#extrae = callPackage ./pkgs/extrae/default.nix { }; # Broken and outdated
@@ -30,8 +30,7 @@ let
amd-uprof-driver = _prev.callPackage ./pkgs/amd-uprof/driver.nix { };
});
lmbench = callPackage ./pkgs/lmbench/default.nix { };
# Broken and unmantained
# mcxx = callPackage ./pkgs/mcxx/default.nix { };
mcxx = callPackage ./pkgs/mcxx/default.nix { };
meteocat-exporter = prev.callPackage ./pkgs/meteocat-exporter/default.nix { };
mpi = final.mpich; # Set MPICH as default
mpich = callPackage ./pkgs/mpich/default.nix { mpich = prev.mpich; };
@@ -55,10 +54,10 @@ let
#psmpi = callPackage ./pkgs/parastation/psmpi.nix { }; # Unmaintaned
slurm = import ./pkgs/slurm/default.nix { slurm = prev.slurm; };
sonar = callPackage ./pkgs/sonar/default.nix { };
stdenvClangOmpss2 = final.stdenv.override { cc = final.clangOmpss2; allowedRequisites = null; };
stdenvClangOmpss2Nanos6 = final.stdenv.override { cc = final.clangOmpss2Nanos6; allowedRequisites = null; };
stdenvClangOmpss2Nodes = final.stdenv.override { cc = final.clangOmpss2Nodes; allowedRequisites = null; };
stdenvClangOmpss2NodesOmpv = final.stdenv.override { cc = final.clangOmpss2NodesOmpv; allowedRequisites = null; };
stdenvClangOmpss2 = final.stdenv.override { cc = final.buildPackages.clangOmpss2; allowedRequisites = null; };
stdenvClangOmpss2Nanos6 = final.stdenv.override { cc = final.buildPackages.clangOmpss2Nanos6; allowedRequisites = null; };
stdenvClangOmpss2Nodes = final.stdenv.override { cc = final.buildPackages.clangOmpss2Nodes; allowedRequisites = null; };
stdenvClangOmpss2NodesOmpv = final.stdenv.override { cc = final.buildPackages.clangOmpss2NodesOmpv; allowedRequisites = null; };
tagaspi = callPackage ./pkgs/tagaspi/default.nix { };
tampi = callPackage ./pkgs/tampi/default.nix { };
upc-qaire-exporter = prev.callPackage ./pkgs/upc-qaire-exporter/default.nix { };

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@@ -19,7 +19,7 @@ in stdenv.mkDerivation {
'';
hardeningDisable = [ "pic" "format" ];
nativeBuildInputs = kernel.moduleBuildDependencies;
patches = [ ./makefile.patch ./hrtimer.patch ./remove-wr-rdmsrq.patch ];
patches = [ ./makefile.patch ./hrtimer.patch ];
makeFlags = [
"KERNEL_VERSION=${kernel.modDirVersion}"
"KERNEL_DIR=${kernel.dev}/lib/modules/${kernel.modDirVersion}/build"

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@@ -1,20 +0,0 @@
diff --git a/inc/PwrProfAsm.h b/inc/PwrProfAsm.h
index d77770a..c93a0e9 100644
--- a/inc/PwrProfAsm.h
+++ b/inc/PwrProfAsm.h
@@ -347,6 +347,7 @@
#endif
+/*
#define rdmsrq(msr,val1,val2,val3,val4) ({ \
__asm__ __volatile__( \
"rdmsr\n" \
@@ -362,6 +363,7 @@
:"c"(msr), "a"(val1), "d"(val2), "S"(val3), "D"(val4) \
); \
})
+*/
#define rdmsrpw(msr,val1,val2,val3,val4) ({ \
__asm__ __volatile__( \

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@@ -9,15 +9,13 @@
, nanos6
, nodes
, nosv
, mkl
, mpi
, tampi
, openblas
, ovni
, gitBranch ? "master"
, gitURL ? "ssh://git@bscpm04.bsc.es/rarias/bench6.git"
, gitCommit ? "fe30c2cfe36b535ef26a0054e010bc005e88ba04"
, useMkl ? true
, gitCommit ? "bf29a53113737c3aa74d2fe3d55f59868faea7b4"
}:
stdenv.mkDerivation rec {
@@ -44,13 +42,10 @@ stdenv.mkDerivation rec {
nosv
mpi
tampi
ovni
] ++ (if (useMkl) then [
mkl
] else [
openblas
openblas.dev
]);
ovni
];
env = {
NANOS6_HOME = nanos6;

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@@ -12,7 +12,7 @@ stdenv.mkDerivation (finalAttrs: {
src = ./.;
buildInputs = [
cudatoolkit # Required for nvcc
(lib.getOutput "static" cudaPackages.cuda_cudart) # Required for -lcudart_static
cudaPackages.cuda_cudart.static # Required for -lcudart_static
autoAddDriverRunpath
];
installPhase = ''

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@@ -10,7 +10,7 @@
, zlib
, autoPatchelfHook
, libfabric
, gcc
, gcc13
, wrapCCWith
}:
@@ -33,6 +33,8 @@ let
maintainers = with lib.maintainers.bsc; [ abonerib ];
};
gcc = gcc13;
v = {
hpckit = "2023.1.0";
compiler = "2023.1.0";

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@@ -1,9 +1,9 @@
{
llvmPackages_latest
stdenv
, llvmPackages_latest
, lib
, fetchFromGitHub
, cmake
, bash
, python3
, perl
, which
@@ -11,7 +11,6 @@
, libffi
, zlib
, pkg-config
, gcc # needed to set the rpath of libstdc++ for clang-tblgen
, enableDebug ? false
, useGit ? false
, gitUrl ? "ssh://git@bscpm04.bsc.es/llvm-ompss/llvm-mono.git"
@@ -20,7 +19,10 @@
}:
let
stdenv = llvmPackages_latest.stdenv;
llvmPackages = llvmPackages_latest;
llvmStdenv = llvmPackages.stdenv;
# needed to set the rpath of libstdc++ for clang-tblgen
gcc = stdenv.cc;
release = rec {
version = "2025.11";
@@ -43,7 +45,7 @@ let
source = if (useGit) then git else release;
in stdenv.mkDerivation {
in llvmStdenv.mkDerivation {
pname = "clang-ompss2";
inherit (source) src version;
@@ -60,13 +62,12 @@ in stdenv.mkDerivation {
};
nativeBuildInputs = [
bash
cmake
elfutils
llvmPackages_latest.lld
llvmPackages.lld
perl
pkg-config
python3
perl
which
zlib
];
@@ -97,8 +98,13 @@ in stdenv.mkDerivation {
cd build
cmakeDir="../llvm"
cmakeFlagsArray=(
"-DLLVM_HOST_TRIPLE=${stdenv.targetPlatform.config}"
"-DLLVM_HOST_TRIPLE=${llvmStdenv.targetPlatform.config}"
'' + (if "${llvmStdenv.targetPlatform.config}" == "riscv64-unknown-linux-gnu" then ''
"-DLLVM_DEFAULT_TARGET_TRIPLE=riscv64-unknown-linux-gnu"
"-DLLVM_TARGETS_TO_BUILD=RISCV"
'' else ''
"-DLLVM_TARGETS_TO_BUILD=host"
'') + ''
"-DLLVM_BUILD_LLVM_DYLIB=ON"
"-DLLVM_LINK_LLVM_DYLIB=ON"
# Required to run clang-ast-dump and clang-tblgen during build
@@ -107,7 +113,8 @@ in stdenv.mkDerivation {
"-DCMAKE_CXX_FLAGS_DEBUG=-g -ggnu-pubnames"
"-DCMAKE_EXE_LINKER_FLAGS_DEBUG=-Wl,--gdb-index"
"-DLLVM_LIT_ARGS=-sv --xunit-xml-output=xunit.xml"
"-DLLVM_ENABLE_PROJECTS=clang;compiler-rt;lld"
"-DLLVM_ENABLE_PROJECTS=clang;lld"
#"-DLLVM_ENABLE_PROJECTS=clang;compiler-rt;lld"
"-DLLVM_ENABLE_ASSERTIONS=ON"
"-DLLVM_INSTALL_TOOLCHAIN_ONLY=ON"
"-DCMAKE_INSTALL_BINDIR=bin"
@@ -117,8 +124,8 @@ in stdenv.mkDerivation {
# install
"-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=ON"
"-DCMAKE_INSTALL_RPATH=${zlib}/lib:${gcc.cc.lib}/lib"
"-DLLVM_APPEND_VC_REV=ON"
"-DLLVM_FORCE_VC_REVISION=${source.version}"
#"-DLLVM_APPEND_VC_REV=ON"
#"-DLLVM_FORCE_VC_REVISION=${source.version}"
)
'';

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@@ -3,46 +3,65 @@
, lib
, gcc
, clangOmpss2Unwrapped
, openmp ? null
, openmp
, useOpenmp ? false
, openmpv
, useOpenmpV ? false
, nanos6
, useNanos6 ? false
, nodes
, useNodes ? false
, wrapCCWith
, llvmPackages_latest
, ompss2rt ? null
}:
with lib;
let
usingNodesAndOmpv = (openmp.pname == "openmp-v" && ompss2rt.pname == "nodes");
sameNosv = openmp.nosv == ompss2rt.nosv;
getSplice = target: pkg: if pkg ? "__spliced" && pkg.__spliced ? target then pkg.__spliced."${target}" else pkg;
#getSpliceTargetTarget = pkg: if pkg ? "__spliced" && pkg.__spliced ? "targetTarget" then pkg.__spliced.targetTarget else pkg;
getSpliceTargetTarget = getSplice "targetTarget";
omp = if useOpenmp then openmp else if useOpenmpV then openmpv else null;
ompss2rtUnspliced = if useNanos6 then nanos6 else if useNodes then nodes else null;
ompss2rt = getSpliceTargetTarget ompss2rtUnspliced;
usingNodesAndOmpv = (omp.pname == "openmp-v" && ompss2rt.pname == "nodes");
sameNosvUnspliced = omp.nosv == ompss2rtUnspliced.nosv;
sameNosvSpliced = (getSpliceTargetTarget omp.nosv) == ompss2rt.nosv;
in
assert assertMsg (usingNodesAndOmpv -> sameNosv) "OpenMP-V and NODES must share the same nOS-V";
assert assertMsg (usingNodesAndOmpv -> sameNosvUnspliced) "OpenMP-V and NODES must share the same nOS-V before splice";
assert assertMsg (usingNodesAndOmpv -> sameNosvSpliced) "OpenMP-V and NODES must share the same nOS-V after splice";
assert assertMsg (useOpenmp -> !useOpenmpV) "Either OpenMP or OpenMP-V may be enabled, but not both";
assert assertMsg (useNanos6 -> !useNodes) "Either Nanos6 or NODES may be enabled, but not both";
let
homevar = if ompss2rt.pname == "nanos6" then "NANOS6_HOME" else "NODES_HOME";
rtname = if ompss2rt.pname == "nanos6" then "libnanos6" else "libnodes";
ompname = if openmp.pname == "openmp-v" then "libompv" else "libomp";
ompname = if omp.pname == "openmp-v" then "libompv" else "libomp";
# We need to replace the lld linker from bintools with our linker just built,
# otherwise we run into incompatibility issues when mixing compiler and linker
# versions.
bintools-unwrapped = llvmPackages_latest.bintools-unwrapped.override {
bintools-unwrapped = llvmPackages_latest.tools.bintools-unwrapped.override {
lld = clangOmpss2Unwrapped;
};
bintools = llvmPackages_latest.bintools.override {
bintools = llvmPackages_latest.tools.bintools.override {
bintools = bintools-unwrapped;
};
targetConfig = stdenv.targetPlatform.config;
inherit gcc;
cc = clangOmpss2Unwrapped;
gccVersion = with versions; let v = gcc.version; in concatStringsSep "." [(major v) (minor v) (patch v)];
in wrapCCWith {
in (wrapCCWith {
inherit cc bintools;
# extraPackages adds packages to depsTargetTargetPropagated
extraPackages = optional (openmp != null) openmp;
extraPackages = optional (omp != null) omp;
extraBuildCommands = ''
echo "-target ${targetConfig}" >> $out/nix-support/cc-cflags
#echo "-fuse-ld=lld" >> $out/nix-support/cc-cflags
echo "-B${gcc.cc}/lib/gcc/${targetConfig}/${gccVersion}" >> $out/nix-support/cc-cflags
echo "-L${gcc.cc}/lib/gcc/${targetConfig}/${gccVersion}" >> $out/nix-support/cc-ldflags
echo "-L${gcc.cc.lib}/lib" >> $out/nix-support/cc-ldflags
@@ -56,15 +75,17 @@ in wrapCCWith {
echo "--gcc-toolchain=${gcc}" >> $out/nix-support/cc-cflags
wrap clang++ $wrapper $ccPath/clang++
wrap ${targetConfig}clang++ $wrapper $ccPath/clang++
wrap ${targetConfig}clang $wrapper $ccPath/clang
'' + optionalString (openmp != null) ''
'' + optionalString (omp != null) ''
echo "export OPENMP_RUNTIME=${ompname}" >> $out/nix-support/cc-wrapper-hook
'' + optionalString (ompss2rt != null) ''
echo "export OMPSS2_RUNTIME=${rtname}" >> $out/nix-support/cc-wrapper-hook
echo "export ${homevar}=${ompss2rt}" >> $out/nix-support/cc-wrapper-hook
'' + optionalString (ompss2rt != null && ompss2rt.pname == "nodes") ''
echo "export NOSV_HOME=${ompss2rt.nosv}" >> $out/nix-support/cc-wrapper-hook
echo "export NOSV_HOME=${ompss2rt}" >> $out/nix-support/cc-wrapper-hook
'';
}
}) // { inherit ompss2rt; }

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@@ -39,6 +39,9 @@ stdenv.mkDerivation rec {
perl
pkg-config
python3
];
buildInputs = [
] ++ lib.optionals enableNosv [
nosv
] ++ lib.optionals enableOvni [

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@@ -65,7 +65,6 @@ stdenv.mkDerivation rec {
];
meta = {
broken = true;
homepage = "https://github.com/bsc-pm/mcxx";
description = "C/C++/Fortran source-to-source compilation infrastructure aimed at fast prototyping";
maintainers = with lib.maintainers.bsc; [ rpenacob ];

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@@ -1,11 +1,9 @@
{ python3Packages, lib }:
python3Packages.buildPythonApplication {
python3Packages.buildPythonApplication rec {
pname = "meteocat-exporter";
version = "1.0";
pyproject = true;
src = ./.;
doCheck = false;

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@@ -12,7 +12,7 @@
, paraverKernel
, openssl
, glibcLocales
, wrapGAppsHook3
, wrapGAppsHook
}:
let
@@ -64,7 +64,7 @@ stdenv.mkDerivation rec {
autoconf
automake
autoreconfHook
wrapGAppsHook3
wrapGAppsHook
];
buildInputs = [

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@@ -1,11 +1,9 @@
{ python3Packages, lib }:
python3Packages.buildPythonApplication {
python3Packages.buildPythonApplication rec {
pname = "upc-qaire-exporter";
version = "1.0";
pyproject = true;
src = ./.;
doCheck = false;