Use correct serial console ttyS1 in fox

Allow booting an old LTS kernel to compare performance.

flake.lock

@@ -2,16 +2,16 @@
   "nodes": {
     "nixpkgs": {
       "locked": {
-        "lastModified": 1752436162,
-        "narHash": "sha256-Kt1UIPi7kZqkSc5HVj6UY5YLHHEzPBkgpNUByuyxtlw=",
+        "lastModified": 1767634882,
+        "narHash": "sha256-2GffSfQxe3sedHzK+sTKlYo/NTIAGzbFCIsNMUPAAnk=",
         "owner": "NixOS",
         "repo": "nixpkgs",
-        "rev": "dfcd5b901dbab46c9c6e80b265648481aafb01f8",
+        "rev": "3c9db02515ef1d9b6b709fc60ba9a540957f661c",
         "type": "github"
       },
       "original": {
         "owner": "NixOS",
-        "ref": "nixos-25.05",
+        "ref": "nixos-25.11",
         "repo": "nixpkgs",
         "type": "github"
       }

flake.nix

@@ -1,6 +1,6 @@
 {
   inputs = {
-    nixpkgs.url = "github:NixOS/nixpkgs/nixos-25.05";
+    nixpkgs.url = "github:NixOS/nixpkgs/nixos-25.11";
   };
 
   outputs = { self, nixpkgs, ... }:

m/bay/configuration.nix

@@ -24,7 +24,7 @@
       address = "10.0.40.40";
       prefixLength = 24;
     } ];
-    interfaces.ibp5s0.ipv4.addresses = [ {
+    interfaces.ibs785.ipv4.addresses = [ {
       address = "10.0.42.40";
       prefixLength = 24;
     } ];

m/common/base/boot.nix

@@ -4,13 +4,6 @@
   # Use the GRUB 2 boot loader.
   boot.loader.grub.enable = true;
 
-  # Enable GRUB2 serial console
-  boot.loader.grub.extraConfig = ''
-    serial --unit=0 --speed=115200 --word=8 --parity=no --stop=1
-    terminal_input --append serial
-    terminal_output --append serial
-  '';
-
   boot.kernel.sysctl = {
     "kernel.perf_event_paranoid" = lib.mkDefault "-1";
 

m/common/base/env.nix

@@ -1,10 +1,10 @@
-{ pkgs, config, ... }:
+{ pkgs, ... }:
 
 {
   environment.systemPackages = with pkgs; [
     vim wget git htop tmux pciutils tcpdump ripgrep nix-index nixos-option
     nix-diff ipmitool freeipmi ethtool lm_sensors cmake gnumake file tree
-    ncdu config.boot.kernelPackages.perf ldns pv
+    ncdu perf ldns pv
     # From jungle overlay
     osumb nixgen
   ];

m/common/base/watchdog.nix

@@ -5,5 +5,5 @@
   boot.kernelModules = [ "ipmi_watchdog" ];
 
   # Enable systemd watchdog with 30 s interval
-  systemd.watchdog.runtimeTime = "30s";
+  systemd.settings.Manager.RuntimeWatchdogSec = 30;
 }

m/common/xeon/console.nix

@@ -11,4 +11,11 @@
     "console=tty1"
     "console=ttyS0,115200"
   ];
+
+  # Enable GRUB2 serial console
+  boot.loader.grub.extraConfig = ''
+    serial --unit=0 --speed=115200 --word=8 --parity=no --stop=1
+    terminal_input --append serial
+    terminal_output --append serial
+  '';
 }

m/eudy/kernel/perf.nix

@@ -1,11 +1,6 @@
-{ config, pkgs, lib, ... }:
+{ pkgs, lib, ... }:
 
 {
-  # add the perf tool
-  environment.systemPackages = with pkgs; [
-    config.boot.kernelPackages.perf
-  ];
-
   # allow non-root users to read tracing data from the kernel
   boot.kernel.sysctl."kernel.perf_event_paranoid" = -2;
   boot.kernel.sysctl."kernel.kptr_restrict" = 0;

m/fox/configuration.nix

@@ -3,13 +3,13 @@
 {
   imports = [
     ../common/base.nix
-    ../common/xeon/console.nix
     ../module/amd-uprof.nix
     ../module/emulation.nix
     ../module/nvidia.nix
     ../module/slurm-client.nix
     ../module/hut-substituter.nix
     ./wireguard.nix
+    ./serial-console.nix
   ];
 
   # Don't turn off on August as UPC has different dates.
@@ -19,6 +19,9 @@
   # Select the this using the ID to avoid mismatches
   boot.loader.grub.device = "/dev/disk/by-id/wwn-0x500a07514b0c1103";
 
+  # Increase time so we can boot other entries
+  boot.loader.timeout = 60;
+
   # No swap, there is plenty of RAM
   swapDevices = lib.mkForce [];
 
@@ -31,7 +34,10 @@
   # Use performance for benchmarks
   powerManagement.cpuFreqGovernor = "performance";
 
-  services.amd-uprof.enable = true;
+  # Enable amd-uprof in >= 6.15 kernels only
+  services.amd-uprof.enable =
+    let ver = config.boot.kernelPackages.kernel.version;
+    in (lib.strings.compareVersions ver "6.15") >= 0;
 
   # Disable NUMA balancing
   boot.kernel.sysctl."kernel.numa_balancing" = 0;
@@ -42,6 +48,11 @@
   # Disable NMI watchdog to save one hw counter (for AMD uProf)
   boot.kernel.sysctl."kernel.nmi_watchdog" = 0;
 
+  specialisation.oldKernel.configuration = {
+    system.nixos.tags = [ "old-kernel" ];
+    boot.kernelPackages = lib.mkForce pkgs.linuxPackages_6_12;
+  };
+
   services.openssh.settings.X11Forwarding = true;
 
   services.fail2ban.enable = true;

m/fox/serial-console.nix

@@ -0,0 +1,21 @@
+{
+  # Restart the serial console
+  systemd.services."serial-getty@ttyS1" = {
+    enable = true;
+    wantedBy = [ "getty.target" ];
+    serviceConfig.Restart = "always";
+  };
+
+  # Enable serial console
+  boot.kernelParams = [
+    "console=tty1"
+    "console=ttyS1,115200"
+  ];
+
+  # Enable GRUB2 serial console
+  boot.loader.grub.extraConfig = ''
+    serial --unit=1 --speed=115200 --word=8 --parity=no --stop=1
+    terminal_input --append serial
+    terminal_output --append serial
+  '';
+}

m/hut/configuration.nix

@@ -45,7 +45,7 @@
       address = "10.0.40.7";
       prefixLength = 24;
     } ];
-    interfaces.ibp5s0.ipv4.addresses = [ {
+    interfaces.ibs785.ipv4.addresses = [ {
       address = "10.0.42.7";
       prefixLength = 24;
     } ];

m/lake2/configuration.nix

@@ -46,7 +46,7 @@
       address = "10.0.40.42";
       prefixLength = 24;
     } ];
-    interfaces.ibp5s0.ipv4.addresses = [ {
+    interfaces.ibs785.ipv4.addresses = [ {
       address = "10.0.42.42";
       prefixLength = 24;
     } ];

m/module/debuginfod.nix

@@ -1,3 +1,10 @@
 {
-  services.nixseparatedebuginfod.enable = true;
+  services.nixseparatedebuginfod2 = {
+    enable = true;
+    substituters = [
+      "local:"
+      "https://cache.nixos.org"
+      "http://hut/cache"
+    ];
+  };
 }

m/owl1/configuration.nix

@@ -20,7 +20,7 @@
       address = "10.0.40.1";
       prefixLength = 24;
     } ];
-    interfaces.ibp5s0.ipv4.addresses = [ {
+    interfaces.ibs785.ipv4.addresses = [ {
       address = "10.0.42.1";
       prefixLength = 24;
     } ];

m/owl2/configuration.nix

@@ -21,7 +21,7 @@
       prefixLength = 24;
     } ];
     # Watch out! The OmniPath device is not in the same place here:
-    interfaces.ibp129s0.ipv4.addresses = [ {
+    interfaces.ibs801.ipv4.addresses = [ {
       address = "10.0.42.2";
       prefixLength = 24;
     } ];

m/raccoon/configuration.nix

@@ -4,6 +4,7 @@
   imports = [
     ../common/base.nix
     ../common/ssf/hosts.nix
+    ../common/xeon/console.nix
     ../module/emulation.nix
     ../module/debuginfod.nix
     ../module/nvidia.nix

m/tent/gitea.nix

@@ -27,4 +27,7 @@
       };
     };
   };
+
+  # Allow gitea user to send mail
+  users.users.gitea.extraGroups = [ "mail-robot" ];
 }

overlay.nix

@@ -30,7 +30,8 @@ let
       amd-uprof-driver = _prev.callPackage ./pkgs/amd-uprof/driver.nix { };
     });
     lmbench = callPackage ./pkgs/lmbench/default.nix { };
-    mcxx = callPackage ./pkgs/mcxx/default.nix { };
+    # Broken and unmantained
+    # mcxx = callPackage ./pkgs/mcxx/default.nix { };
     meteocat-exporter = prev.callPackage ./pkgs/meteocat-exporter/default.nix { };
     mpi = final.mpich; # Set MPICH as default
     mpich = callPackage ./pkgs/mpich/default.nix { mpich = prev.mpich; };

pkgs/amd-uprof/driver.nix

@@ -19,7 +19,7 @@ in stdenv.mkDerivation {
   '';
   hardeningDisable = [ "pic" "format" ];
   nativeBuildInputs = kernel.moduleBuildDependencies;
-  patches = [ ./makefile.patch ./hrtimer.patch ];
+  patches = [ ./makefile.patch ./hrtimer.patch ./remove-wr-rdmsrq.patch ];
   makeFlags = [
     "KERNEL_VERSION=${kernel.modDirVersion}"
     "KERNEL_DIR=${kernel.dev}/lib/modules/${kernel.modDirVersion}/build"

pkgs/amd-uprof/remove-wr-rdmsrq.patch

@@ -0,0 +1,20 @@
+diff --git a/inc/PwrProfAsm.h b/inc/PwrProfAsm.h
+index d77770a..c93a0e9 100644
+--- a/inc/PwrProfAsm.h
++++ b/inc/PwrProfAsm.h
+@@ -347,6 +347,7 @@
+ 
+ #endif
+ 
++/*
+ #define rdmsrq(msr,val1,val2,val3,val4) ({ \
+         __asm__ __volatile__( \
+                               "rdmsr\n" \
+@@ -362,6 +363,7 @@
+                               :"c"(msr), "a"(val1), "d"(val2), "S"(val3), "D"(val4) \
+                             ); \
+     })
++*/
+ 
+ #define rdmsrpw(msr,val1,val2,val3,val4) ({ \
+         __asm__ __volatile__( \

pkgs/bench6/default.nix

@@ -9,13 +9,15 @@
 , nanos6
 , nodes
 , nosv
+, mkl
 , mpi
 , tampi
 , openblas
 , ovni
 , gitBranch ? "master"
 , gitURL ? "ssh://git@bscpm04.bsc.es/rarias/bench6.git"
-, gitCommit ? "bf29a53113737c3aa74d2fe3d55f59868faea7b4"
+, gitCommit ? "fe30c2cfe36b535ef26a0054e010bc005e88ba04"
+, useMkl ? true
 }:
 
 stdenv.mkDerivation rec {
@@ -42,10 +44,13 @@ stdenv.mkDerivation rec {
     nosv
     mpi
     tampi
+    ovni
+  ] ++ (if (useMkl) then [
+    mkl
+  ] else [
     openblas
     openblas.dev
-    ovni
-  ];
+  ]);
 
   env = {
     NANOS6_HOME = nanos6;

pkgs/cudainfo/default.nix

@@ -12,7 +12,7 @@ stdenv.mkDerivation (finalAttrs: {
   src = ./.;
   buildInputs = [
     cudatoolkit # Required for nvcc
-    cudaPackages.cuda_cudart.static # Required for -lcudart_static
+    (lib.getOutput "static" cudaPackages.cuda_cudart) # Required for -lcudart_static
     autoAddDriverRunpath
   ];
   installPhase = ''

pkgs/intel-oneapi/2023.nix

@@ -10,7 +10,7 @@
 , zlib
 , autoPatchelfHook
 , libfabric
-, gcc13
+, gcc
 , wrapCCWith
 }:
 
@@ -33,8 +33,6 @@ let
     maintainers = with lib.maintainers.bsc; [ abonerib ];
   };
 
-  gcc = gcc13;
-
   v = {
     hpckit   = "2023.1.0";
     compiler = "2023.1.0";

pkgs/llvm-ompss2/default.nix

@@ -27,10 +27,10 @@ let
   # We need to replace the lld linker from bintools with our linker just built,
   # otherwise we run into incompatibility issues when mixing compiler and linker
   # versions.
-  bintools-unwrapped = llvmPackages_latest.tools.bintools-unwrapped.override {
+  bintools-unwrapped = llvmPackages_latest.bintools-unwrapped.override {
     lld = clangOmpss2Unwrapped;
   };
-  bintools = llvmPackages_latest.tools.bintools.override {
+  bintools = llvmPackages_latest.bintools.override {
     bintools = bintools-unwrapped;
   };
   targetConfig = stdenv.targetPlatform.config;

pkgs/mcxx/default.nix

@@ -65,6 +65,7 @@ stdenv.mkDerivation rec {
   ];
 
   meta = {
+    broken = true;
     homepage = "https://github.com/bsc-pm/mcxx";
     description = "C/C++/Fortran source-to-source compilation infrastructure aimed at fast prototyping";
     maintainers = with lib.maintainers.bsc; [ rpenacob ];

pkgs/meteocat-exporter/default.nix

@@ -1,9 +1,11 @@
 { python3Packages, lib }:
 
-python3Packages.buildPythonApplication rec {
+python3Packages.buildPythonApplication {
   pname = "meteocat-exporter";
   version = "1.0";
 
+  pyproject = true;
+
   src = ./.;
 
   doCheck = false;

pkgs/paraver/default.nix

@@ -12,7 +12,7 @@
 , paraverKernel
 , openssl
 , glibcLocales
-, wrapGAppsHook
+, wrapGAppsHook3
 }:
 
 let
@@ -64,7 +64,7 @@ stdenv.mkDerivation rec {
     autoconf
     automake
     autoreconfHook
-    wrapGAppsHook
+    wrapGAppsHook3
   ];
 
   buildInputs = [

pkgs/upc-qaire-exporter/default.nix

@@ -1,9 +1,11 @@
 { python3Packages, lib }:
 
-python3Packages.buildPythonApplication rec {
+python3Packages.buildPythonApplication {
   pname = "upc-qaire-exporter";
   version = "1.0";
 
+  pyproject = true;
+
   src = ./.;
 
   doCheck = false;