Add ompss2rt to wrapper passthru

In order to send email, the gitea user needs to be in the mail-robot
group.

Fixes: #220

flake.lock

@@ -2,11 +2,11 @@
   "nodes": {
     "nixpkgs": {
       "locked": {
-        "lastModified": 1764522689,
-        "narHash": "sha256-SqUuBFjhl/kpDiVaKLQBoD8TLD+/cTUzzgVFoaHrkqY=",
+        "lastModified": 1767634882,
+        "narHash": "sha256-2GffSfQxe3sedHzK+sTKlYo/NTIAGzbFCIsNMUPAAnk=",
         "owner": "NixOS",
         "repo": "nixpkgs",
-        "rev": "8bb5646e0bed5dbd3ab08c7a7cc15b75ab4e1d0f",
+        "rev": "3c9db02515ef1d9b6b709fc60ba9a540957f661c",
         "type": "github"
       },
       "original": {

m/apex/configuration.nix

@@ -57,6 +57,18 @@
     };
   };
 
+  services.fail2ban = {
+    enable = true;
+    maxretry = 5;
+    bantime-increment = {
+      enable = true; # Double ban time on each attack
+      maxtime = "7d"; # Ban up to a week
+    };
+  };
+
+  # Disable SSH login with password, allow only keypair
+  services.openssh.settings.PasswordAuthentication = false;
+
   networking.firewall = {
     extraCommands = ''
       # Blackhole BSC vulnerability scanner (OpenVAS) as it is spamming our

m/bay/configuration.nix

@@ -24,7 +24,7 @@
       address = "10.0.40.40";
       prefixLength = 24;
     } ];
-    interfaces.ibp5s0.ipv4.addresses = [ {
+    interfaces.ibs785.ipv4.addresses = [ {
       address = "10.0.42.40";
       prefixLength = 24;
     } ];

m/common/base/users.nix

@@ -139,6 +139,7 @@
         openssh.authorizedKeys.keys = [
           "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIKGt0ESYxekBiHJQowmKpfdouw0hVm3N7tUMtAaeLejK vincent@varch"
         ];
+        shell = pkgs.zsh;
       };
 
       pmartin1 = {

m/eudy/kernel/perf.nix

@@ -1,11 +1,6 @@
-{ config, pkgs, lib, ... }:
+{ pkgs, lib, ... }:
 
 {
-  # add the perf tool
-  environment.systemPackages = with pkgs; [
-    config.boot.kernelPackages.perf
-  ];
-
   # allow non-root users to read tracing data from the kernel
   boot.kernel.sysctl."kernel.perf_event_paranoid" = -2;
   boot.kernel.sysctl."kernel.kptr_restrict" = 0;

m/hut/configuration.nix

@@ -45,7 +45,7 @@
       address = "10.0.40.7";
       prefixLength = 24;
     } ];
-    interfaces.ibp5s0.ipv4.addresses = [ {
+    interfaces.ibs785.ipv4.addresses = [ {
       address = "10.0.42.7";
       prefixLength = 24;
     } ];

m/lake2/configuration.nix

@@ -46,7 +46,7 @@
       address = "10.0.40.42";
       prefixLength = 24;
     } ];
-    interfaces.ibp5s0.ipv4.addresses = [ {
+    interfaces.ibs785.ipv4.addresses = [ {
       address = "10.0.42.42";
       prefixLength = 24;
     } ];

m/tent/gitea.nix

@@ -27,4 +27,7 @@
       };
     };
   };
+
+  # Allow gitea user to send mail
+  users.users.gitea.extraGroups = [ "mail-robot" ];
 }

overlay.nix

@@ -49,16 +49,17 @@ let
     osumb = callPackage ./pkgs/osu/default.nix { };
     ovni = callPackage ./pkgs/ovni/default.nix { };
     ovniGit = final.ovni.override { useGit = true; };
+    papi = callPackage ./pkgs/papi/default.nix { papi = prev.papi; };
     paraverKernel = callPackage ./pkgs/paraver/kernel.nix { };
     prometheus-slurm-exporter = prev.callPackage ./pkgs/slurm-exporter/default.nix { };
     #pscom = callPackage ./pkgs/parastation/pscom.nix { }; # Unmaintaned
     #psmpi = callPackage ./pkgs/parastation/psmpi.nix { }; # Unmaintaned
     slurm = import ./pkgs/slurm/default.nix { slurm = prev.slurm; };
     sonar = callPackage ./pkgs/sonar/default.nix { };
-    stdenvClangOmpss2 = final.stdenv.override { cc = final.clangOmpss2; allowedRequisites = null; };
-    stdenvClangOmpss2Nanos6 = final.stdenv.override { cc = final.clangOmpss2Nanos6; allowedRequisites = null; };
-    stdenvClangOmpss2Nodes = final.stdenv.override { cc = final.clangOmpss2Nodes; allowedRequisites = null; };
-    stdenvClangOmpss2NodesOmpv = final.stdenv.override { cc = final.clangOmpss2NodesOmpv; allowedRequisites = null; };
+    stdenvClangOmpss2 = final.stdenv.override { cc = final.buildPackages.clangOmpss2; allowedRequisites = null; };
+    stdenvClangOmpss2Nanos6 = final.stdenv.override { cc = final.buildPackages.clangOmpss2Nanos6; allowedRequisites = null; };
+    stdenvClangOmpss2Nodes = final.stdenv.override { cc = final.buildPackages.clangOmpss2Nodes; allowedRequisites = null; };
+    stdenvClangOmpss2NodesOmpv = final.stdenv.override { cc = final.buildPackages.clangOmpss2NodesOmpv; allowedRequisites = null; };
     tagaspi = callPackage ./pkgs/tagaspi/default.nix { };
     tampi = callPackage ./pkgs/tampi/default.nix { };
     upc-qaire-exporter = prev.callPackage ./pkgs/upc-qaire-exporter/default.nix { };

pkgs/amd-uprof/driver.nix

@@ -20,7 +20,7 @@ in stdenv.mkDerivation {
   hardeningDisable = [ "pic" "format" ];
   strictDeps = true;
   nativeBuildInputs = kernel.moduleBuildDependencies;
-  patches = [ ./makefile.patch ./hrtimer.patch ];
+  patches = [ ./makefile.patch ./hrtimer.patch ./remove-wr-rdmsrq.patch ];
   makeFlags = [
     "KERNEL_VERSION=${kernel.modDirVersion}"
     "KERNEL_DIR=${kernel.dev}/lib/modules/${kernel.modDirVersion}/build"

pkgs/amd-uprof/remove-wr-rdmsrq.patch

@@ -0,0 +1,20 @@
+diff --git a/inc/PwrProfAsm.h b/inc/PwrProfAsm.h
+index d77770a..c93a0e9 100644
+--- a/inc/PwrProfAsm.h
++++ b/inc/PwrProfAsm.h
+@@ -347,6 +347,7 @@
+ 
+ #endif
+ 
++/*
+ #define rdmsrq(msr,val1,val2,val3,val4) ({ \
+         __asm__ __volatile__( \
+                               "rdmsr\n" \
+@@ -362,6 +363,7 @@
+                               :"c"(msr), "a"(val1), "d"(val2), "S"(val3), "D"(val4) \
+                             ); \
+     })
++*/
+ 
+ #define rdmsrpw(msr,val1,val2,val3,val4) ({ \
+         __asm__ __volatile__( \

pkgs/extrae/default.nix

@@ -20,7 +20,7 @@
 #, python3Packages
 , installShellFiles
 , symlinkJoin
-, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
+, enablePapi ? true
 }:
 
 let

pkgs/llvm-ompss2/clang.nix

@@ -1,9 +1,9 @@
 {
-  llvmPackages_latest
+  stdenv
+, llvmPackages_latest
 , lib
 , fetchFromGitHub
 , cmake
-, bash
 , python3
 , perl
 , which
@@ -11,7 +11,6 @@
 , libffi
 , zlib
 , pkg-config
-, gcc # needed to set the rpath of libstdc++ for clang-tblgen
 , enableDebug ? false
 , useGit ? false
 , gitUrl ? "ssh://git@bscpm04.bsc.es/llvm-ompss/llvm-mono.git"
@@ -20,7 +19,10 @@
 }:
 
 let
-  stdenv = llvmPackages_latest.stdenv;
+  llvmPackages = llvmPackages_latest;
+  llvmStdenv = llvmPackages.stdenv;
+  # needed to set the rpath of libstdc++ for clang-tblgen
+  gcc = stdenv.cc;
 
   release = rec {
     version = "2025.11";
@@ -43,7 +45,7 @@ let
 
   source = if (useGit) then git else release;
 
-in stdenv.mkDerivation {
+in llvmStdenv.mkDerivation {
   pname = "clang-ompss2";
   inherit (source) src version;
 
@@ -61,13 +63,12 @@ in stdenv.mkDerivation {
   };
 
   nativeBuildInputs = [
-    bash
     cmake
     elfutils
-    llvmPackages_latest.lld
+    llvmPackages.lld
+    perl
     pkg-config
     python3
-    perl
     which
     zlib
   ];
@@ -98,8 +99,13 @@ in stdenv.mkDerivation {
     cd build
     cmakeDir="../llvm"
     cmakeFlagsArray=(
-      "-DLLVM_HOST_TRIPLE=${stdenv.targetPlatform.config}"
+      "-DLLVM_HOST_TRIPLE=${llvmStdenv.targetPlatform.config}"
+    '' + (if "${llvmStdenv.targetPlatform.config}" == "riscv64-unknown-linux-gnu" then ''
+      "-DLLVM_DEFAULT_TARGET_TRIPLE=riscv64-unknown-linux-gnu"
+      "-DLLVM_TARGETS_TO_BUILD=RISCV"
+    '' else ''
       "-DLLVM_TARGETS_TO_BUILD=host"
+    '') + ''
       "-DLLVM_BUILD_LLVM_DYLIB=ON"
       "-DLLVM_LINK_LLVM_DYLIB=ON"
       # Required to run clang-ast-dump and clang-tblgen during build
@@ -108,7 +114,8 @@ in stdenv.mkDerivation {
       "-DCMAKE_CXX_FLAGS_DEBUG=-g -ggnu-pubnames"
       "-DCMAKE_EXE_LINKER_FLAGS_DEBUG=-Wl,--gdb-index"
       "-DLLVM_LIT_ARGS=-sv --xunit-xml-output=xunit.xml"
-      "-DLLVM_ENABLE_PROJECTS=clang;compiler-rt;lld"
+      "-DLLVM_ENABLE_PROJECTS=clang;lld"
+      "-DLLVM_ENABLE_RUNTIMES=compiler-rt"
       "-DLLVM_ENABLE_ASSERTIONS=ON"
       "-DLLVM_INSTALL_TOOLCHAIN_ONLY=ON"
       "-DCMAKE_INSTALL_BINDIR=bin"

pkgs/llvm-ompss2/default.nix

@@ -37,7 +37,7 @@ let
   inherit gcc;
   cc = clangOmpss2Unwrapped;
   gccVersion = with versions; let v = gcc.version; in concatStringsSep "." [(major v) (minor v) (patch v)];
-in wrapCCWith {
+in (wrapCCWith {
   inherit cc bintools;
   # extraPackages adds packages to depsTargetTargetPropagated
   extraPackages = optional (openmp != null) openmp;
@@ -56,7 +56,8 @@ in wrapCCWith {
 
     echo "--gcc-toolchain=${gcc}" >> $out/nix-support/cc-cflags
 
-    wrap clang++  $wrapper $ccPath/clang++
+    wrap ${targetConfig}clang++  $wrapper $ccPath/clang++
+    wrap ${targetConfig}clang    $wrapper $ccPath/clang
 
   '' + optionalString (openmp != null) ''
     echo "export OPENMP_RUNTIME=${ompname}" >> $out/nix-support/cc-wrapper-hook
@@ -64,7 +65,6 @@ in wrapCCWith {
     echo "export OMPSS2_RUNTIME=${rtname}" >> $out/nix-support/cc-wrapper-hook
     echo "export ${homevar}=${ompss2rt}"   >> $out/nix-support/cc-wrapper-hook
   '' + optionalString (ompss2rt != null && ompss2rt.pname == "nodes") ''
-    echo "export NOSV_HOME=${ompss2rt.nosv}" >> $out/nix-support/cc-wrapper-hook
+    echo "export NOSV_HOME=${ompss2rt}" >> $out/nix-support/cc-wrapper-hook
   '';
-}
-
+}).overrideAttrs (prev: { passthru = (prev.passthru or {}) // { inherit ompss2rt; }; })

pkgs/llvm-ompss2/openmp.nix

@@ -74,6 +74,28 @@ stdenv.mkDerivation rec {
     rm -f $out/libllvmrt/libomp.*
   '';
 
+  doInstallCheck = true;
+  # There are not cmake flags to force nOS-V, it enables it when found through
+  # pkg-config. If enableNosv is set, but we fail to find it at build time,
+  # the build will succeed but won't use nOS-V (libompv won't be created).
+  # This is a sanity check to ensure that after install we have the proper
+  # files.
+  installCheckPhase =
+    if enableNosv then
+      ''
+        test -f $out/lib/libompv.so
+        test -f $out/libllvmrt/libompv.so
+        test ! -f $out/lib/libomp.so
+        test ! -f $out/libllvmrt/libomp.so
+      ''
+    else
+      ''
+        test -f $out/lib/libomp.so
+        test -f $out/libllvmrt/libomp.so
+        test ! -f $out/lib/libompv.so
+        test ! -f $out/libllvmrt/libompv.so
+      '';
+
   passthru = {
     inherit nosv;
   };

pkgs/nanos6/check-papi-version-with-pkgconfig.patch

@@ -1,67 +0,0 @@
-diff --git a/m4/papi.m4 b/m4/papi.m4
---- a/m4/papi.m4
-+++ b/m4/papi.m4
-@@ -24,12 +24,13 @@ AC_DEFUN([AC_CHECK_PAPI],
- 		else
- 			PKG_CHECK_MODULES(
- 				[papi],
--				[papi],
-+				[papi >= 5.6.0],
- 				[
- 					AC_MSG_CHECKING([the PAPI installation prefix])
- 					AC_MSG_RESULT([retrieved from pkg-config])
- 					papi_CPPFLAGS="${papi_CFLAGS}"
- 					ac_use_papi=yes
-+					ac_papi_version_correct=yes
- 				], [
- 					AC_MSG_CHECKING([the PAPI installation prefix])
- 					AC_MSG_RESULT([not available])
-@@ -67,27 +68,29 @@ AC_DEFUN([AC_CHECK_PAPI],
- 		fi
- 
- 		if test x"${ac_use_papi}" = x"yes" ; then
--			if test x"${ac_cv_use_papi_prefix}" != x"" ; then
--				papiBinary=${ac_cv_use_papi_prefix}/bin/papi_version
--			else
--				papiBinary=papi_version
--			fi
--			papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
-+			if test x"${ac_papi_version_correct}" != x"yes" ; then
-+				if test x"${ac_cv_use_papi_prefix}" != x"" ; then
-+					papiBinary=${ac_cv_use_papi_prefix}/bin/papi_version
-+				else
-+					papiBinary=papi_version
-+				fi
-+				papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
- 
--			AX_COMPARE_VERSION(
--				[[${papiVersion}]],
--				[[ge]],
--				[[5.6.0]],
--				[[ac_papi_version_correct=yes]],
--				[[ac_papi_version_correct=no]]
--			)
-+				AX_COMPARE_VERSION(
-+					[[${papiVersion}]],
-+					[[ge]],
-+					[[5.6.0]],
-+					[[ac_papi_version_correct=yes]],
-+					[[ac_papi_version_correct=no]]
-+				)
- 
--			if test x"${ac_papi_version_correct}" != x"yes" ; then
--				AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
--				ac_use_papi=no
--			else
--				AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
--				AC_MSG_RESULT([${ac_papi_version_correct}])
-+				if test x"${ac_papi_version_correct}" != x"yes" ; then
-+					AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
-+					ac_use_papi=no
-+				else
-+					AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
-+					AC_MSG_RESULT([${ac_papi_version_correct}])
-+				fi
- 			fi
- 		fi
- 

pkgs/nanos6/default.nix

@@ -16,7 +16,7 @@
 , jemallocNanos6 ? null
 , cachelineBytes ? 64
 , enableGlibcxxDebug ? false
-, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
+, enablePapi ? true
 , useGit ? false
 , gitUrl ? "ssh://git@bscpm04.bsc.es/nanos6/nanos6"
 , gitBranch ? "master"
@@ -80,7 +80,8 @@ in
       (optional enableGlibcxxDebug "CXXFLAGS=-D_GLIBCXX_DEBUG") ++
       # Most nanos6 api symbols are resolved at runtime, so prefer
       # ifunc by default
-      (optional isCross "--with-symbol-resolution=ifunc");
+      (optional isCross "--with-symbol-resolution=ifunc") ++
+      (optional enablePapi "--with-papi=${papi}");
 
     postConfigure = lib.optionalString (!enableDebug) ''
       # Disable debug
@@ -96,7 +97,6 @@ in
     separateDebugInfo = true;
 
     strictDeps = true;
-    patches = [ ./check-papi-version-with-pkgconfig.patch ];
 
     nativeBuildInputs = [
       autoconf

pkgs/nosv/check-papi-version-with-pkgconfig.patch

@@ -1,68 +0,0 @@
-diff --git a/m4/papi.m4 b/m4/papi.m4
-index de905848..fa3db9a1 100644
---- a/m4/papi.m4
-+++ b/m4/papi.m4
-@@ -24,12 +24,13 @@ AC_DEFUN([AC_CHECK_PAPI],
- 		else
- 			PKG_CHECK_MODULES(
- 				[papi],
--				[papi],
-+				[papi >= 5.6.0],
- 				[
- 					AC_MSG_CHECKING([the PAPI installation prefix])
- 					AC_MSG_RESULT([retrieved from pkg-config])
- 					papi_CFLAGS="${papi_CFLAGS}"
- 					ac_use_papi=yes
-+					ac_papi_version_correct=yes
- 				], [
- 					AC_MSG_CHECKING([the PAPI installation prefix])
- 					AC_MSG_RESULT([not available])
-@@ -67,27 +68,29 @@ AC_DEFUN([AC_CHECK_PAPI],
- 		fi
- 
- 		if test x"${ac_use_papi}" = x"yes" ; then
--			if test x"${ac_cv_use_papi_prefix}" != x"" ; then
--				papiBinary=${ac_cv_use_papi_prefix}/bin/papi_version
--			else
--				papiBinary=papi_version
--			fi
--			papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
-+			if test x"${ac_papi_version_correct}" != x"yes" ; then
-+				if test x"${ac_cv_use_papi_prefix}" != x"" ; then
-+					papiBinary=${ac_cv_use_papi_prefix}/bin/papi_version
-+				else
-+					papiBinary=papi_version
-+				fi
-+				papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
- 
--			AX_COMPARE_VERSION(
--				[[${papiVersion}]],
--				[[ge]],
--				[[5.6.0]],
--				[[ac_papi_version_correct=yes]],
--				[[ac_papi_version_correct=no]]
--			)
-+				AX_COMPARE_VERSION(
-+					[[${papiVersion}]],
-+					[[ge]],
-+					[[5.6.0]],
-+					[[ac_papi_version_correct=yes]],
-+					[[ac_papi_version_correct=no]]
-+				)
- 
--			if test x"${ac_papi_version_correct}" != x"yes" ; then
--				AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
--				ac_use_papi=no
--			else
--				AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
--				AC_MSG_RESULT([${ac_papi_version_correct}])
-+				if test x"${ac_papi_version_correct}" != x"yes" ; then
-+					AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
-+					ac_use_papi=no
-+				else
-+					AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
-+					AC_MSG_RESULT([${ac_papi_version_correct}])
-+				fi
- 			fi
- 		fi
- 

pkgs/nosv/default.nix

@@ -7,7 +7,7 @@
 , numactl
 , hwloc
 , papi
-, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
+, enablePapi ? true
 , cacheline ? 64 # bits
 , ovni ? null
 , useGit ? false
@@ -40,18 +40,17 @@ let
 
   source = if (useGit) then git else release;
 in
-  stdenv.mkDerivation rec {
+  stdenv.mkDerivation {
     pname = "nosv";
     inherit (source) src version;
     hardeningDisable = [ "all" ];
     dontStrip = true;
     separateDebugInfo = true;
     strictDeps = true;
-    patches = [ ./check-papi-version-with-pkgconfig.patch ];
     configureFlags = [
       "--with-ovni=${ovni}"
       "CACHELINE_WIDTH=${toString cacheline}"
-    ];
+    ] ++ lib.optionals enablePapi [ "--with-papi=${papi}" ];
     nativeBuildInputs = [
       autoreconfHook
       pkg-config
@@ -61,6 +60,7 @@ in
       hwloc
       ovni
     ] ++ lib.optionals enablePapi [ papi ];
+    patches = [ ./fix-papi.patch ];
 
     meta = {
       homepage = "https://gitlab.bsc.es/nos-v/nos-v";

pkgs/nosv/fix-papi.patch

@@ -0,0 +1,136 @@
+Commit ID: c09633f172ce4075e0a05a33f6dcbe8e03e1202a
+Change ID: onmwypnnrysktutwsvotqovzponvwrxs
+Bookmarks: fix/papi fix/papi@git fix/papi@origin
+Author   : Aleix Boné <aleix.boneribo@bsc.es> (2025-12-10 11:14:14)
+Committer: Aleix Boné <aleix.boneribo@bsc.es> (2025-12-12 12:56:48)
+
+    Improve PAPI m4 module for cross compilation
+
+diff --git a/m4/papi.m4 b/m4/papi.m4
+index de90584870..8398f856f5 100644
+--- a/m4/papi.m4
++++ b/m4/papi.m4
+@@ -1,6 +1,6 @@
+ #	This file is part of Nanos6 and is licensed under the terms contained in the COPYING file.
+ #
+-#	Copyright (C) 2021-2022 Barcelona Supercomputing Center (BSC)
++#	Copyright (C) 2021-2025 Barcelona Supercomputing Center (BSC)
+ 
+ AC_DEFUN([AC_CHECK_PAPI],
+ 	[
+@@ -8,34 +8,38 @@
+ 			[papi],
+ 			[AS_HELP_STRING([--with-papi=prefix], [specify the installation prefix of PAPI])],
+ 			[ ac_cv_use_papi_prefix=$withval ],
+-			[ ac_cv_use_papi_prefix="" ]
++			[ ac_cv_use_papi_prefix="check" ]
+ 		)
+ 
+ 		if test x"${ac_cv_use_papi_prefix}" = x"no"; then
+ 			AC_MSG_CHECKING([the PAPI installation prefix])
+ 			AC_MSG_RESULT([${ac_cv_use_papi_prefix}])
+ 			ac_use_papi=no
+-		elif test x"${ac_cv_use_papi_prefix}" != x"" ; then
+-			AC_MSG_CHECKING([the PAPI installation prefix])
+-			AC_MSG_RESULT([${ac_cv_use_papi_prefix}])
+-			papi_LIBS="-L${ac_cv_use_papi_prefix}/lib -lpapi -Wl,-rpath,${ac_cv_use_papi_prefix}/lib"
+-			papi_CFLAGS="-I$ac_cv_use_papi_prefix/include"
+-			ac_use_papi=yes
+-		else
++		elif test x"${ac_cv_use_papi_prefix}" = x""; then
++			AC_MSG_RESULT([invalid prefix])
++			AC_MSG_ERROR([papi prefix specified but empty])
++		elif test x"${ac_cv_use_papi_prefix}" = x"yes" -o x"${ac_cv_use_papi_prefix}" = x"check"; then
+ 			PKG_CHECK_MODULES(
+ 				[papi],
+-				[papi],
++				[papi >= 5.6.0],
+ 				[
+ 					AC_MSG_CHECKING([the PAPI installation prefix])
+ 					AC_MSG_RESULT([retrieved from pkg-config])
+ 					papi_CFLAGS="${papi_CFLAGS}"
+ 					ac_use_papi=yes
++					ac_papi_version_correct=yes
+ 				], [
+ 					AC_MSG_CHECKING([the PAPI installation prefix])
+ 					AC_MSG_RESULT([not available])
+ 					ac_use_papi=no
+ 				]
+ 			)
++		else
++			AC_MSG_CHECKING([the PAPI installation prefix])
++			AC_MSG_RESULT([${ac_cv_use_papi_prefix}])
++			papi_LIBS="-L${ac_cv_use_papi_prefix}/lib -lpapi -Wl,-rpath,${ac_cv_use_papi_prefix}/lib"
++			papi_CFLAGS="-I$ac_cv_use_papi_prefix/include"
++			ac_use_papi=yes
+ 		fi
+ 
+ 		if test x"${ac_use_papi}" = x"yes" ; then
+@@ -53,10 +57,10 @@
+ 					ac_use_papi=yes
+ 				],
+ 				[
+-					if test x"${ac_cv_use_papi_prefix}" != x"" ; then
+-						AC_MSG_ERROR([PAPI cannot be found.])
++					if test x"${ac_cv_use_papi_prefix}" = x"yes" ; then
++						AC_MSG_ERROR([PAPI >= 5.6.0 cannot be found.])
+ 					else
+-						AC_MSG_WARN([PAPI cannot be found.])
++						AC_MSG_WARN([PAPI >= 5.6.0 not available.])
+ 					fi
+ 					ac_use_papi=no
+ 				]
+@@ -64,30 +68,38 @@
+ 
+ 			CFLAGS="${ac_save_CFLAGS}"
+ 			LIBS="${ac_save_LIBS}"
++		elif test x"${ac_cv_use_papi_prefix}" = x"yes" ; then
++			AC_MSG_ERROR([PAPI >= 5.6.0 cannot be found.])
+ 		fi
+ 
+-		if test x"${ac_use_papi}" = x"yes" ; then
+-			if test x"${ac_cv_use_papi_prefix}" != x"" ; then
++		if test x"${ac_use_papi}" = x"yes" -a x"${ac_papi_version_correct}" != x"yes" ; then
++			if test x"${ac_cv_use_papi_prefix}" != x"yes" -a x"${ac_cv_use_papi_prefix}" != x"check" ; then
+ 				papiBinary=${ac_cv_use_papi_prefix}/bin/papi_version
+ 			else
+ 				papiBinary=papi_version
+ 			fi
+-			papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
+ 
+-			AX_COMPARE_VERSION(
+-				[[${papiVersion}]],
+-				[[ge]],
+-				[[5.6.0]],
+-				[[ac_papi_version_correct=yes]],
+-				[[ac_papi_version_correct=no]]
+-			)
+ 
+-			if test x"${ac_papi_version_correct}" != x"yes" ; then
+-				AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
+-				ac_use_papi=no
++			if test x"$cross_compiling" = x"yes" ; then
++				AC_MSG_WARN([Cross-compiling detected, skipping PAPI version check])
+ 			else
+-				AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
+-				AC_MSG_RESULT([${ac_papi_version_correct}])
++				papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
++
++				AX_COMPARE_VERSION(
++					[[${papiVersion}]],
++					[[ge]],
++					[[5.6.0]],
++					[[ac_papi_version_correct=yes]],
++					[[ac_papi_version_correct=no]]
++				)
++
++				if test x"${ac_papi_version_correct}" != x"yes" ; then
++					AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
++					ac_use_papi=no
++				else
++					AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
++					AC_MSG_RESULT([${ac_papi_version_correct}])
++				fi
+ 			fi
+ 		fi
+ 

pkgs/papi/default.nix

@@ -0,0 +1,22 @@
+{
+  stdenv,
+  papi,
+}:
+
+if stdenv.hostPlatform == stdenv.buildPlatform then
+  papi
+else
+  papi.overrideAttrs (old: {
+    configureFlags = (old.configureFlags or [ ]) ++ [
+      "--enable-perf_event_uncore=no"
+      "--with-sysdetect=no"
+      "--with-ffsll"
+      "--with-tls=__thread"
+      "--with-virtualtimer=clock_thread_cputime_id"
+      "--with-walltimer=clock_realtime"
+      "--with-perf-events"
+      "--with-CPU=${stdenv.hostPlatform.uname.processor}"
+      "--with-arch=${stdenv.hostPlatform.uname.processor}"
+    ];
+    patches = (old.patches or [ ]) ++ [ ./fix-ar-cross.patch ];
+  })

pkgs/papi/fix-ar-cross.patch

@@ -0,0 +1,19 @@
+diff --git a/sde_lib/Makefile b/sde_lib/Makefile
+index 8518f92..90a9953 100644
+--- a/sde_lib/Makefile
++++ b/sde_lib/Makefile
+@@ -1,4 +1,5 @@
+ CC ?= gcc
++AR ?= ar
+ SDE_INC = -I. -I..
+ SDE_LD = -ldl -pthread
+ CFLAGS += -Wextra -Wall -O2
+@@ -18,7 +19,7 @@ dynamic: $(DOBJS)
+ 	rm -f *_d.o
+ 
+ static: $(SOBJS)
+-	ar rs libsde.a $(SOBJS)
++	$(AR) rs libsde.a $(SOBJS)
+ 	rm -f *_s.o
+ 
+ clean: