Fix openmp buildInputs

Remove unused sys-devices requirement in ld test
Fix papi_version_check
2025-12-09 15:17:13 +01:00 · 2025-12-09 15:17:13 +01:00 · 2025-12-09 15:17:13 +01:00 · 2025-12-09 12:31:42 +01:00 · 2025-12-09 12:28:20 +01:00 · 2025-12-03 10:15:17 +01:00
22 changed files with 175 additions and 278 deletions
--- a/flake.lock
+++ b/flake.lock
@@ -2,11 +2,11 @@
  "nodes": {
    "nixpkgs": {
      "locked": {
-        "lastModified": 1767634882,
-        "narHash": "sha256-2GffSfQxe3sedHzK+sTKlYo/NTIAGzbFCIsNMUPAAnk=",
+        "lastModified": 1764522689,
+        "narHash": "sha256-SqUuBFjhl/kpDiVaKLQBoD8TLD+/cTUzzgVFoaHrkqY=",
        "owner": "NixOS",
        "repo": "nixpkgs",
-        "rev": "3c9db02515ef1d9b6b709fc60ba9a540957f661c",
+        "rev": "8bb5646e0bed5dbd3ab08c7a7cc15b75ab4e1d0f",
        "type": "github"
      },
      "original": {
--- a/m/apex/configuration.nix
+++ b/m/apex/configuration.nix
@@ -57,18 +57,6 @@
    };
  };

-  services.fail2ban = {
-    enable = true;
-    maxretry = 5;
-    bantime-increment = {
-      enable = true; # Double ban time on each attack
-      maxtime = "7d"; # Ban up to a week
-    };
-  };
-
-  # Disable SSH login with password, allow only keypair
-  services.openssh.settings.PasswordAuthentication = false;
-
  networking.firewall = {
    extraCommands = ''
      # Blackhole BSC vulnerability scanner (OpenVAS) as it is spamming our
--- a/m/bay/configuration.nix
+++ b/m/bay/configuration.nix
@@ -24,7 +24,7 @@
      address = "10.0.40.40";
      prefixLength = 24;
    } ];
-    interfaces.ibs785.ipv4.addresses = [ {
+    interfaces.ibp5s0.ipv4.addresses = [ {
      address = "10.0.42.40";
      prefixLength = 24;
    } ];
--- a/m/common/base/users.nix
+++ b/m/common/base/users.nix
@@ -139,7 +139,6 @@
        openssh.authorizedKeys.keys = [
          "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIKGt0ESYxekBiHJQowmKpfdouw0hVm3N7tUMtAaeLejK vincent@varch"
        ];
-        shell = pkgs.zsh;
      };

      pmartin1 = {
--- a/m/eudy/kernel/perf.nix
+++ b/m/eudy/kernel/perf.nix
@@ -1,6 +1,11 @@
-{ pkgs, lib, ... }:
+{ config, pkgs, lib, ... }:

 {
+  # add the perf tool
+  environment.systemPackages = with pkgs; [
+    config.boot.kernelPackages.perf
+  ];
+
  # allow non-root users to read tracing data from the kernel
  boot.kernel.sysctl."kernel.perf_event_paranoid" = -2;
  boot.kernel.sysctl."kernel.kptr_restrict" = 0;
--- a/m/hut/configuration.nix
+++ b/m/hut/configuration.nix
@@ -45,7 +45,7 @@
      address = "10.0.40.7";
      prefixLength = 24;
    } ];
-    interfaces.ibs785.ipv4.addresses = [ {
+    interfaces.ibp5s0.ipv4.addresses = [ {
      address = "10.0.42.7";
      prefixLength = 24;
    } ];
--- a/m/lake2/configuration.nix
+++ b/m/lake2/configuration.nix
@@ -46,7 +46,7 @@
      address = "10.0.40.42";
      prefixLength = 24;
    } ];
-    interfaces.ibs785.ipv4.addresses = [ {
+    interfaces.ibp5s0.ipv4.addresses = [ {
      address = "10.0.42.42";
      prefixLength = 24;
    } ];
--- a/m/tent/gitea.nix
+++ b/m/tent/gitea.nix
@@ -27,7 +27,4 @@
      };
    };
  };
-
-  # Allow gitea user to send mail
-  users.users.gitea.extraGroups = [ "mail-robot" ];
 }
--- a/overlay.nix
+++ b/overlay.nix
@@ -49,17 +49,16 @@ let
    osumb = callPackage ./pkgs/osu/default.nix { };
    ovni = callPackage ./pkgs/ovni/default.nix { };
    ovniGit = final.ovni.override { useGit = true; };
-    papi = callPackage ./pkgs/papi/default.nix { papi = prev.papi; };
    paraverKernel = callPackage ./pkgs/paraver/kernel.nix { };
    prometheus-slurm-exporter = prev.callPackage ./pkgs/slurm-exporter/default.nix { };
    #pscom = callPackage ./pkgs/parastation/pscom.nix { }; # Unmaintaned
    #psmpi = callPackage ./pkgs/parastation/psmpi.nix { }; # Unmaintaned
    slurm = import ./pkgs/slurm/default.nix { slurm = prev.slurm; };
    sonar = callPackage ./pkgs/sonar/default.nix { };
-    stdenvClangOmpss2 = final.stdenv.override { cc = final.buildPackages.clangOmpss2; allowedRequisites = null; };
-    stdenvClangOmpss2Nanos6 = final.stdenv.override { cc = final.buildPackages.clangOmpss2Nanos6; allowedRequisites = null; };
-    stdenvClangOmpss2Nodes = final.stdenv.override { cc = final.buildPackages.clangOmpss2Nodes; allowedRequisites = null; };
-    stdenvClangOmpss2NodesOmpv = final.stdenv.override { cc = final.buildPackages.clangOmpss2NodesOmpv; allowedRequisites = null; };
+    stdenvClangOmpss2 = final.stdenv.override { cc = final.clangOmpss2; allowedRequisites = null; };
+    stdenvClangOmpss2Nanos6 = final.stdenv.override { cc = final.clangOmpss2Nanos6; allowedRequisites = null; };
+    stdenvClangOmpss2Nodes = final.stdenv.override { cc = final.clangOmpss2Nodes; allowedRequisites = null; };
+    stdenvClangOmpss2NodesOmpv = final.stdenv.override { cc = final.clangOmpss2NodesOmpv; allowedRequisites = null; };
    tagaspi = callPackage ./pkgs/tagaspi/default.nix { };
    tampi = callPackage ./pkgs/tampi/default.nix { };
    upc-qaire-exporter = prev.callPackage ./pkgs/upc-qaire-exporter/default.nix { };
--- a/pkgs/amd-uprof/driver.nix
+++ b/pkgs/amd-uprof/driver.nix
@@ -20,7 +20,7 @@ in stdenv.mkDerivation {
  hardeningDisable = [ "pic" "format" ];
  strictDeps = true;
  nativeBuildInputs = kernel.moduleBuildDependencies;
-  patches = [ ./makefile.patch ./hrtimer.patch ./remove-wr-rdmsrq.patch ];
+  patches = [ ./makefile.patch ./hrtimer.patch ];
  makeFlags = [
    "KERNEL_VERSION=${kernel.modDirVersion}"
    "KERNEL_DIR=${kernel.dev}/lib/modules/${kernel.modDirVersion}/build"
--- a/pkgs/amd-uprof/remove-wr-rdmsrq.patch
+++ b/pkgs/amd-uprof/remove-wr-rdmsrq.patch
@@ -1,20 +0,0 @@
-diff --git a/inc/PwrProfAsm.h b/inc/PwrProfAsm.h
-index d77770a..c93a0e9 100644
--- a/inc/PwrProfAsm.h
-+++ b/inc/PwrProfAsm.h
-@@ -347,6 +347,7 @@
- 
- #endif
- 
-+/*
- #define rdmsrq(msr,val1,val2,val3,val4) ({ \
-         __asm__ __volatile__( \
-                               "rdmsr\n" \
-@@ -362,6 +363,7 @@
-                               :"c"(msr), "a"(val1), "d"(val2), "S"(val3), "D"(val4) \
-                             ); \
-     })
-+*/
- 
- #define rdmsrpw(msr,val1,val2,val3,val4) ({ \
-         __asm__ __volatile__( \
--- a/pkgs/extrae/default.nix
+++ b/pkgs/extrae/default.nix
@@ -20,7 +20,7 @@
 #, python3Packages
 , installShellFiles
 , symlinkJoin
-, enablePapi ? true
+, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
 }:

 let
--- a/pkgs/llvm-ompss2/clang.nix
+++ b/pkgs/llvm-ompss2/clang.nix
@@ -1,9 +1,9 @@
 {
-  stdenv
-, llvmPackages_latest
+  llvmPackages_latest
 , lib
 , fetchFromGitHub
 , cmake
+, bash
 , python3
 , perl
 , which
@@ -11,6 +11,7 @@
 , libffi
 , zlib
 , pkg-config
+, gcc # needed to set the rpath of libstdc++ for clang-tblgen
 , enableDebug ? false
 , useGit ? false
 , gitUrl ? "ssh://git@bscpm04.bsc.es/llvm-ompss/llvm-mono.git"
@@ -19,10 +20,7 @@
 }:

 let
-  llvmPackages = llvmPackages_latest;
-  llvmStdenv = llvmPackages.stdenv;
-  # needed to set the rpath of libstdc++ for clang-tblgen
-  gcc = stdenv.cc;
+  stdenv = llvmPackages_latest.stdenv;

  release = rec {
    version = "2025.11";
@@ -45,7 +43,7 @@ let

  source = if (useGit) then git else release;

-in llvmStdenv.mkDerivation {
+in stdenv.mkDerivation {
  pname = "clang-ompss2";
  inherit (source) src version;

@@ -63,12 +61,13 @@ in llvmStdenv.mkDerivation {
  };

  nativeBuildInputs = [
+    bash
    cmake
    elfutils
-    llvmPackages.lld
-    perl
+    llvmPackages_latest.lld
    pkg-config
    python3
+    perl
    which
    zlib
  ];
@@ -99,13 +98,8 @@ in llvmStdenv.mkDerivation {
    cd build
    cmakeDir="../llvm"
    cmakeFlagsArray=(
-      "-DLLVM_HOST_TRIPLE=${llvmStdenv.targetPlatform.config}"
-    '' + (if "${llvmStdenv.targetPlatform.config}" == "riscv64-unknown-linux-gnu" then ''
-      "-DLLVM_DEFAULT_TARGET_TRIPLE=riscv64-unknown-linux-gnu"
-      "-DLLVM_TARGETS_TO_BUILD=RISCV"
-    '' else ''
+      "-DLLVM_HOST_TRIPLE=${stdenv.targetPlatform.config}"
      "-DLLVM_TARGETS_TO_BUILD=host"
-    '') + ''
      "-DLLVM_BUILD_LLVM_DYLIB=ON"
      "-DLLVM_LINK_LLVM_DYLIB=ON"
      # Required to run clang-ast-dump and clang-tblgen during build
@@ -114,8 +108,7 @@ in llvmStdenv.mkDerivation {
      "-DCMAKE_CXX_FLAGS_DEBUG=-g -ggnu-pubnames"
      "-DCMAKE_EXE_LINKER_FLAGS_DEBUG=-Wl,--gdb-index"
      "-DLLVM_LIT_ARGS=-sv --xunit-xml-output=xunit.xml"
-      "-DLLVM_ENABLE_PROJECTS=clang;lld"
-      "-DLLVM_ENABLE_RUNTIMES=compiler-rt"
+      "-DLLVM_ENABLE_PROJECTS=clang;compiler-rt;lld"
      "-DLLVM_ENABLE_ASSERTIONS=ON"
      "-DLLVM_INSTALL_TOOLCHAIN_ONLY=ON"
      "-DCMAKE_INSTALL_BINDIR=bin"
--- a/pkgs/llvm-ompss2/default.nix
+++ b/pkgs/llvm-ompss2/default.nix
@@ -37,7 +37,7 @@ let
  inherit gcc;
  cc = clangOmpss2Unwrapped;
  gccVersion = with versions; let v = gcc.version; in concatStringsSep "." [(major v) (minor v) (patch v)];
-in (wrapCCWith {
+in wrapCCWith {
  inherit cc bintools;
  # extraPackages adds packages to depsTargetTargetPropagated
  extraPackages = optional (openmp != null) openmp;
@@ -56,8 +56,7 @@ in (wrapCCWith {

    echo "--gcc-toolchain=${gcc}" >> $out/nix-support/cc-cflags

-    wrap ${targetConfig}clang++  $wrapper $ccPath/clang++
-    wrap ${targetConfig}clang    $wrapper $ccPath/clang
+    wrap clang++  $wrapper $ccPath/clang++

  '' + optionalString (openmp != null) ''
    echo "export OPENMP_RUNTIME=${ompname}" >> $out/nix-support/cc-wrapper-hook
@@ -65,6 +64,7 @@ in (wrapCCWith {
    echo "export OMPSS2_RUNTIME=${rtname}" >> $out/nix-support/cc-wrapper-hook
    echo "export ${homevar}=${ompss2rt}"   >> $out/nix-support/cc-wrapper-hook
  '' + optionalString (ompss2rt != null && ompss2rt.pname == "nodes") ''
-    echo "export NOSV_HOME=${ompss2rt}" >> $out/nix-support/cc-wrapper-hook
+    echo "export NOSV_HOME=${ompss2rt.nosv}" >> $out/nix-support/cc-wrapper-hook
  '';
-}).overrideAttrs (prev: { passthru = (prev.passthru or {}) // { inherit ompss2rt; }; })
+}
+
--- a/pkgs/llvm-ompss2/openmp.nix
+++ b/pkgs/llvm-ompss2/openmp.nix
@@ -74,28 +74,6 @@ stdenv.mkDerivation rec {
    rm -f $out/libllvmrt/libomp.*
  '';

-  doInstallCheck = true;
-  # There are not cmake flags to force nOS-V, it enables it when found through
-  # pkg-config. If enableNosv is set, but we fail to find it at build time,
-  # the build will succeed but won't use nOS-V (libompv won't be created).
-  # This is a sanity check to ensure that after install we have the proper
-  # files.
-  installCheckPhase =
-    if enableNosv then
-      ''
-        test -f $out/lib/libompv.so
-        test -f $out/libllvmrt/libompv.so
-        test ! -f $out/lib/libomp.so
-        test ! -f $out/libllvmrt/libomp.so
-      ''
-    else
-      ''
-        test -f $out/lib/libomp.so
-        test -f $out/libllvmrt/libomp.so
-        test ! -f $out/lib/libompv.so
-        test ! -f $out/libllvmrt/libompv.so
-      '';
-
  passthru = {
    inherit nosv;
  };
--- a/pkgs/nanos6/check-papi-version-with-pkgconfig.patch
+++ b/pkgs/nanos6/check-papi-version-with-pkgconfig.patch
@@ -0,0 +1,67 @@
+diff --git a/m4/papi.m4 b/m4/papi.m4
+--- a/m4/papi.m4
+++ b/m4/papi.m4
+@@ -24,12 +24,13 @@ AC_DEFUN([AC_CHECK_PAPI],
+ 		else
+ 			PKG_CHECK_MODULES(
+ 				[papi],
+-				[papi],
+				[papi >= 5.6.0],
+ 				[
+ 					AC_MSG_CHECKING([the PAPI installation prefix])
+ 					AC_MSG_RESULT([retrieved from pkg-config])
+ 					papi_CPPFLAGS="${papi_CFLAGS}"
+ 					ac_use_papi=yes
+					ac_papi_version_correct=yes
+ 				], [
+ 					AC_MSG_CHECKING([the PAPI installation prefix])
+ 					AC_MSG_RESULT([not available])
+@@ -67,27 +68,29 @@ AC_DEFUN([AC_CHECK_PAPI],
+ 		fi
+ 
+ 		if test x"${ac_use_papi}" = x"yes" ; then
+-			if test x"${ac_cv_use_papi_prefix}" != x"" ; then
+-				papiBinary=${ac_cv_use_papi_prefix}/bin/papi_version
+-			else
+-				papiBinary=papi_version
+-			fi
+-			papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
+			if test x"${ac_papi_version_correct}" != x"yes" ; then
+				if test x"${ac_cv_use_papi_prefix}" != x"" ; then
+					papiBinary=${ac_cv_use_papi_prefix}/bin/papi_version
+				else
+					papiBinary=papi_version
+				fi
+				papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
+ 
+-			AX_COMPARE_VERSION(
+-				[[${papiVersion}]],
+-				[[ge]],
+-				[[5.6.0]],
+-				[[ac_papi_version_correct=yes]],
+-				[[ac_papi_version_correct=no]]
+-			)
+				AX_COMPARE_VERSION(
+					[[${papiVersion}]],
+					[[ge]],
+					[[5.6.0]],
+					[[ac_papi_version_correct=yes]],
+					[[ac_papi_version_correct=no]]
+				)
+ 
+-			if test x"${ac_papi_version_correct}" != x"yes" ; then
+-				AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
+-				ac_use_papi=no
+-			else
+-				AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
+-				AC_MSG_RESULT([${ac_papi_version_correct}])
+				if test x"${ac_papi_version_correct}" != x"yes" ; then
+					AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
+					ac_use_papi=no
+				else
+					AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
+					AC_MSG_RESULT([${ac_papi_version_correct}])
+				fi
+ 			fi
+ 		fi
+ 
--- a/pkgs/nanos6/default.nix
+++ b/pkgs/nanos6/default.nix
@@ -16,7 +16,7 @@
 , jemallocNanos6 ? null
 , cachelineBytes ? 64
 , enableGlibcxxDebug ? false
-, enablePapi ? true
+, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
 , useGit ? false
 , gitUrl ? "ssh://git@bscpm04.bsc.es/nanos6/nanos6"
 , gitBranch ? "master"
@@ -80,8 +80,7 @@ in
      (optional enableGlibcxxDebug "CXXFLAGS=-D_GLIBCXX_DEBUG") ++
      # Most nanos6 api symbols are resolved at runtime, so prefer
      # ifunc by default
-      (optional isCross "--with-symbol-resolution=ifunc") ++
-      (optional enablePapi "--with-papi=${papi}");
+      (optional isCross "--with-symbol-resolution=ifunc");

    postConfigure = lib.optionalString (!enableDebug) ''
      # Disable debug
@@ -97,6 +96,7 @@ in
    separateDebugInfo = true;

    strictDeps = true;
+    patches = [ ./check-papi-version-with-pkgconfig.patch ];

    nativeBuildInputs = [
      autoconf
--- a/pkgs/nosv/check-papi-version-with-pkgconfig.patch
+++ b/pkgs/nosv/check-papi-version-with-pkgconfig.patch
@@ -0,0 +1,68 @@
+diff --git a/m4/papi.m4 b/m4/papi.m4
+index de905848..fa3db9a1 100644
+--- a/m4/papi.m4
+++ b/m4/papi.m4
+@@ -24,12 +24,13 @@ AC_DEFUN([AC_CHECK_PAPI],
+ 		else
+ 			PKG_CHECK_MODULES(
+ 				[papi],
+-				[papi],
+				[papi >= 5.6.0],
+ 				[
+ 					AC_MSG_CHECKING([the PAPI installation prefix])
+ 					AC_MSG_RESULT([retrieved from pkg-config])
+ 					papi_CFLAGS="${papi_CFLAGS}"
+ 					ac_use_papi=yes
+					ac_papi_version_correct=yes
+ 				], [
+ 					AC_MSG_CHECKING([the PAPI installation prefix])
+ 					AC_MSG_RESULT([not available])
+@@ -67,27 +68,29 @@ AC_DEFUN([AC_CHECK_PAPI],
+ 		fi
+ 
+ 		if test x"${ac_use_papi}" = x"yes" ; then
+-			if test x"${ac_cv_use_papi_prefix}" != x"" ; then
+-				papiBinary=${ac_cv_use_papi_prefix}/bin/papi_version
+-			else
+-				papiBinary=papi_version
+-			fi
+-			papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
+			if test x"${ac_papi_version_correct}" != x"yes" ; then
+				if test x"${ac_cv_use_papi_prefix}" != x"" ; then
+					papiBinary=${ac_cv_use_papi_prefix}/bin/papi_version
+				else
+					papiBinary=papi_version
+				fi
+				papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
+ 
+-			AX_COMPARE_VERSION(
+-				[[${papiVersion}]],
+-				[[ge]],
+-				[[5.6.0]],
+-				[[ac_papi_version_correct=yes]],
+-				[[ac_papi_version_correct=no]]
+-			)
+				AX_COMPARE_VERSION(
+					[[${papiVersion}]],
+					[[ge]],
+					[[5.6.0]],
+					[[ac_papi_version_correct=yes]],
+					[[ac_papi_version_correct=no]]
+				)
+ 
+-			if test x"${ac_papi_version_correct}" != x"yes" ; then
+-				AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
+-				ac_use_papi=no
+-			else
+-				AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
+-				AC_MSG_RESULT([${ac_papi_version_correct}])
+				if test x"${ac_papi_version_correct}" != x"yes" ; then
+					AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
+					ac_use_papi=no
+				else
+					AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
+					AC_MSG_RESULT([${ac_papi_version_correct}])
+				fi
+ 			fi
+ 		fi
+ 
--- a/pkgs/nosv/default.nix
+++ b/pkgs/nosv/default.nix
@@ -7,7 +7,7 @@
 , numactl
 , hwloc
 , papi
-, enablePapi ? true
+, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
 , cacheline ? 64 # bits
 , ovni ? null
 , useGit ? false
@@ -40,17 +40,18 @@ let

  source = if (useGit) then git else release;
 in
-  stdenv.mkDerivation {
+  stdenv.mkDerivation rec {
    pname = "nosv";
    inherit (source) src version;
    hardeningDisable = [ "all" ];
    dontStrip = true;
    separateDebugInfo = true;
    strictDeps = true;
+    patches = [ ./check-papi-version-with-pkgconfig.patch ];
    configureFlags = [
      "--with-ovni=${ovni}"
      "CACHELINE_WIDTH=${toString cacheline}"
-    ] ++ lib.optionals enablePapi [ "--with-papi=${papi}" ];
+    ];
    nativeBuildInputs = [
      autoreconfHook
      pkg-config
@@ -60,7 +61,6 @@ in
      hwloc
      ovni
    ] ++ lib.optionals enablePapi [ papi ];
-    patches = [ ./fix-papi.patch ];

    meta = {
      homepage = "https://gitlab.bsc.es/nos-v/nos-v";
--- a/pkgs/nosv/fix-papi.patch
+++ b/pkgs/nosv/fix-papi.patch
@@ -1,136 +0,0 @@
-Commit ID: c09633f172ce4075e0a05a33f6dcbe8e03e1202a
-Change ID: onmwypnnrysktutwsvotqovzponvwrxs
-Bookmarks: fix/papi fix/papi@git fix/papi@origin
-Author   : Aleix Boné <aleix.boneribo@bsc.es> (2025-12-10 11:14:14)
-Committer: Aleix Boné <aleix.boneribo@bsc.es> (2025-12-12 12:56:48)
-
-    Improve PAPI m4 module for cross compilation
-
-diff --git a/m4/papi.m4 b/m4/papi.m4
-index de90584870..8398f856f5 100644
--- a/m4/papi.m4
-+++ b/m4/papi.m4
-@@ -1,6 +1,6 @@
- #	This file is part of Nanos6 and is licensed under the terms contained in the COPYING file.
- #
-#	Copyright (C) 2021-2022 Barcelona Supercomputing Center (BSC)
-+#	Copyright (C) 2021-2025 Barcelona Supercomputing Center (BSC)
- 
- AC_DEFUN([AC_CHECK_PAPI],
- 	[
-@@ -8,34 +8,38 @@
- 			[papi],
- 			[AS_HELP_STRING([--with-papi=prefix], [specify the installation prefix of PAPI])],
- 			[ ac_cv_use_papi_prefix=$withval ],
-			[ ac_cv_use_papi_prefix="" ]
-+			[ ac_cv_use_papi_prefix="check" ]
- 		)
- 
- 		if test x"${ac_cv_use_papi_prefix}" = x"no"; then
- 			AC_MSG_CHECKING([the PAPI installation prefix])
- 			AC_MSG_RESULT([${ac_cv_use_papi_prefix}])
- 			ac_use_papi=no
-		elif test x"${ac_cv_use_papi_prefix}" != x"" ; then
-			AC_MSG_CHECKING([the PAPI installation prefix])
-			AC_MSG_RESULT([${ac_cv_use_papi_prefix}])
-			papi_LIBS="-L${ac_cv_use_papi_prefix}/lib -lpapi -Wl,-rpath,${ac_cv_use_papi_prefix}/lib"
-			papi_CFLAGS="-I$ac_cv_use_papi_prefix/include"
-			ac_use_papi=yes
-		else
-+		elif test x"${ac_cv_use_papi_prefix}" = x""; then
-+			AC_MSG_RESULT([invalid prefix])
-+			AC_MSG_ERROR([papi prefix specified but empty])
-+		elif test x"${ac_cv_use_papi_prefix}" = x"yes" -o x"${ac_cv_use_papi_prefix}" = x"check"; then
- 			PKG_CHECK_MODULES(
- 				[papi],
-				[papi],
-+				[papi >= 5.6.0],
- 				[
- 					AC_MSG_CHECKING([the PAPI installation prefix])
- 					AC_MSG_RESULT([retrieved from pkg-config])
- 					papi_CFLAGS="${papi_CFLAGS}"
- 					ac_use_papi=yes
-+					ac_papi_version_correct=yes
- 				], [
- 					AC_MSG_CHECKING([the PAPI installation prefix])
- 					AC_MSG_RESULT([not available])
- 					ac_use_papi=no
- 				]
- 			)
-+		else
-+			AC_MSG_CHECKING([the PAPI installation prefix])
-+			AC_MSG_RESULT([${ac_cv_use_papi_prefix}])
-+			papi_LIBS="-L${ac_cv_use_papi_prefix}/lib -lpapi -Wl,-rpath,${ac_cv_use_papi_prefix}/lib"
-+			papi_CFLAGS="-I$ac_cv_use_papi_prefix/include"
-+			ac_use_papi=yes
- 		fi
- 
- 		if test x"${ac_use_papi}" = x"yes" ; then
-@@ -53,10 +57,10 @@
- 					ac_use_papi=yes
- 				],
- 				[
-					if test x"${ac_cv_use_papi_prefix}" != x"" ; then
-						AC_MSG_ERROR([PAPI cannot be found.])
-+					if test x"${ac_cv_use_papi_prefix}" = x"yes" ; then
-+						AC_MSG_ERROR([PAPI >= 5.6.0 cannot be found.])
- 					else
-						AC_MSG_WARN([PAPI cannot be found.])
-+						AC_MSG_WARN([PAPI >= 5.6.0 not available.])
- 					fi
- 					ac_use_papi=no
- 				]
-@@ -64,30 +68,38 @@
- 
- 			CFLAGS="${ac_save_CFLAGS}"
- 			LIBS="${ac_save_LIBS}"
-+		elif test x"${ac_cv_use_papi_prefix}" = x"yes" ; then
-+			AC_MSG_ERROR([PAPI >= 5.6.0 cannot be found.])
- 		fi
- 
-		if test x"${ac_use_papi}" = x"yes" ; then
-			if test x"${ac_cv_use_papi_prefix}" != x"" ; then
-+		if test x"${ac_use_papi}" = x"yes" -a x"${ac_papi_version_correct}" != x"yes" ; then
-+			if test x"${ac_cv_use_papi_prefix}" != x"yes" -a x"${ac_cv_use_papi_prefix}" != x"check" ; then
- 				papiBinary=${ac_cv_use_papi_prefix}/bin/papi_version
- 			else
- 				papiBinary=papi_version
- 			fi
-			papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
- 
-			AX_COMPARE_VERSION(
-				[[${papiVersion}]],
-				[[ge]],
-				[[5.6.0]],
-				[[ac_papi_version_correct=yes]],
-				[[ac_papi_version_correct=no]]
-			)
- 
-			if test x"${ac_papi_version_correct}" != x"yes" ; then
-				AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
-				ac_use_papi=no
-+			if test x"$cross_compiling" = x"yes" ; then
-+				AC_MSG_WARN([Cross-compiling detected, skipping PAPI version check])
- 			else
-				AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
-				AC_MSG_RESULT([${ac_papi_version_correct}])
-+				papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
-+
-+				AX_COMPARE_VERSION(
-+					[[${papiVersion}]],
-+					[[ge]],
-+					[[5.6.0]],
-+					[[ac_papi_version_correct=yes]],
-+					[[ac_papi_version_correct=no]]
-+				)
-+
-+				if test x"${ac_papi_version_correct}" != x"yes" ; then
-+					AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
-+					ac_use_papi=no
-+				else
-+					AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
-+					AC_MSG_RESULT([${ac_papi_version_correct}])
-+				fi
- 			fi
- 		fi
- 
--- a/pkgs/papi/default.nix
+++ b/pkgs/papi/default.nix
@@ -1,22 +0,0 @@
-{
-  stdenv,
-  papi,
-}:
-
-if stdenv.hostPlatform == stdenv.buildPlatform then
-  papi
-else
-  papi.overrideAttrs (old: {
-    configureFlags = (old.configureFlags or [ ]) ++ [
-      "--enable-perf_event_uncore=no"
-      "--with-sysdetect=no"
-      "--with-ffsll"
-      "--with-tls=__thread"
-      "--with-virtualtimer=clock_thread_cputime_id"
-      "--with-walltimer=clock_realtime"
-      "--with-perf-events"
-      "--with-CPU=${stdenv.hostPlatform.uname.processor}"
-      "--with-arch=${stdenv.hostPlatform.uname.processor}"
-    ];
-    patches = (old.patches or [ ]) ++ [ ./fix-ar-cross.patch ];
-  })
--- a/pkgs/papi/fix-ar-cross.patch
+++ b/pkgs/papi/fix-ar-cross.patch
@@ -1,19 +0,0 @@
-diff --git a/sde_lib/Makefile b/sde_lib/Makefile
-index 8518f92..90a9953 100644
--- a/sde_lib/Makefile
-+++ b/sde_lib/Makefile
-@@ -1,4 +1,5 @@
- CC ?= gcc
-+AR ?= ar
- SDE_INC = -I. -I..
- SDE_LD = -ldl -pthread
- CFLAGS += -Wextra -Wall -O2
-@@ -18,7 +19,7 @@ dynamic: $(DOBJS)
- 	rm -f *_d.o
- 
- static: $(SOBJS)
-	ar rs libsde.a $(SOBJS)
-+	$(AR) rs libsde.a $(SOBJS)
- 	rm -f *_s.o
- 
- clean:
Author	SHA1	Message	Date
Aleix Boné	755e6dd1a7	Fix openmp buildInputs All checks were successful CI / build:cross (pull_request) Successful in 49m18s Details CI / build:all (pull_request) Successful in 57m9s Details	2025-12-09 15:17:13 +01:00
Aleix Boné	b831f0a0bf	Remove unused sys-devices requirement in ld test	2025-12-09 15:17:13 +01:00
Aleix Boné	f77a36ee4c	Fix papi_version_check Instead of running the papi_version binary, use the builtin version check from pkg-config.	2025-12-09 15:17:13 +01:00
Aleix Boné	aab17ab0c4	Fix cudainfo buildInputs	2025-12-09 12:31:42 +01:00
Aleix Boné	21d9e132aa	Set strictDeps to true on all our packages	2025-12-09 12:28:20 +01:00
Aleix Boné	1d3bda33a0	Mark mcxx as broken and remove from package list All checks were successful CI / build:cross (pull_request) Successful in 8s Details CI / build:all (pull_request) Successful in 16s Details	2025-12-03 10:15:17 +01:00
Aleix Boné	87bf095dae	Fix moved package linuxPackages.perf is now perf	2025-12-03 10:15:17 +01:00
Aleix Boné	2264e15102	Fix replaced nixseparatedebuginfod nixseparatedebuginfod has been replaced by nixseparatedebuginfod2	2025-12-03 10:15:17 +01:00
Aleix Boné	209f8a582e	Use standard gcc for intel packages This reverts `26f52aa27d`	2025-12-03 10:15:16 +01:00
Aleix Boné	1457d85f4c	Fix renamed option watchdog.runtimeTime The option 'systemd.watchdog.runtimeTime' has been renamed to 'systemd.settings.Manager.RuntimeWatchdogSec'.	2025-12-02 17:53:14 +01:00
Aleix Boné	ad812ea32d	Replace wrapGAppsHook with wrapGAppsHook3	2025-12-02 17:53:13 +01:00
Aleix Boné	5bc928c407	Fix changed cudaPackages.cuda_cudart output See: https://github.com/NixOS/nixpkgs/pull/437723	2025-12-02 17:53:13 +01:00
Aleix Boné	eb9358abab	Set pyproject=true in buildPythonApplication The buildPythonPackage and buildPythonApplication functions now require an explicit format attribute. Previously the default format used setuptools and called setup.py from the source tree, which is deprecated. The modern alternative is to configure pyproject = true with build-system = [ setuptools ].	2025-12-02 17:53:13 +01:00
Aleix Boné	d2025d35d9	Fix renamed llvm bintools Moved from llvmPackages_latest.tools.bintools to llvmPackages_latest.bintools	2025-12-02 17:53:13 +01:00
Aleix Boné	6e089344da	Upgrade nixpkgs to 25.11	2025-12-02 17:53:13 +01:00