31 Commits

Author SHA1 Message Date
9c6f2e0097 Do not force derviation inputs, use booleans instead
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2026-01-21 15:16:06 +01:00
61ed93c951 Add ompss2rt to wrapper passthru
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2026-01-21 12:46:24 +01:00
7d02658e44 Use explicit splicing in clang wrapper 2026-01-21 12:46:24 +01:00
06aa1fc5d4 Fix clang cross-build 2026-01-21 12:46:24 +01:00
1178574891 Add install check for OpenMP{,-V} 2026-01-21 12:46:24 +01:00
5a4e9ae48a Fix openmp buildInputs 2026-01-21 12:46:23 +01:00
15ebb94645 Remove unused sys-devices requirement in ld test 2026-01-21 12:46:23 +01:00
ada96f349c Enable papi when cross-compiling 2026-01-21 12:46:23 +01:00
1427e357f5 Fix papi cross compilation 2026-01-21 12:46:23 +01:00
435699357d Use pkg-config instead of papi_version_check 2026-01-21 12:46:23 +01:00
a238824ff1 Fix cudainfo buildInputs 2026-01-21 12:46:23 +01:00
de6124f8ca Set strictDeps to true on all our packages 2026-01-21 12:46:22 +01:00
dda6a66782 Fix gitea user to allow sending email
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In order to send email, the gitea user needs to be in the mail-robot
group.

Fixes: #220
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2026-01-20 12:18:52 +01:00
22420e6ac8 Remove unneeded perf package from eudy
It is already included in the base list of packages, which is now only
"perf" and doesn't depend on the kernel version.

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2026-01-20 12:18:49 +01:00
a71cd78b4c Fix infiniband interface names
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2026-01-20 12:18:46 +01:00
e84a2cadbb flake.lock: Update
Flake lock file updates:

• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/8bb5646e0bed5dbd3ab08c7a7cc15b75ab4e1d0f?narHash=sha256-SqUuBFjhl/kpDiVaKLQBoD8TLD%2B/cTUzzgVFoaHrkqY%3D' (2025-11-30)
  → 'github:NixOS/nixpkgs/3c9db02515ef1d9b6b709fc60ba9a540957f661c?narHash=sha256-2GffSfQxe3sedHzK%2BsTKlYo/NTIAGzbFCIsNMUPAAnk%3D' (2026-01-05)

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2026-01-20 12:18:41 +01:00
d3e43eb651 Remove conflicting definitions in amd-uprof-driver
See: https://lkml.org/lkml/2025/4/9/1709

Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2026-01-20 12:15:18 +01:00
a491546ffb Mark mcxx as broken and remove from package list
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2026-01-20 12:15:14 +01:00
933c78a80b Fix moved package linuxPackages.perf is now perf
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2026-01-20 12:15:10 +01:00
150969be9b Fix replaced nixseparatedebuginfod
nixseparatedebuginfod has been replaced by nixseparatedebuginfod2

Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2026-01-20 12:15:06 +01:00
9097729759 Use standard gcc for intel packages
This reverts 26f52aa27d

Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2026-01-20 12:15:02 +01:00
779449f1db Fix renamed option watchdog.runtimeTime
The option 'systemd.watchdog.runtimeTime' has been renamed to
'systemd.settings.Manager.RuntimeWatchdogSec'.

Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2026-01-20 12:14:59 +01:00
6cbe33bd80 Replace wrapGAppsHook with wrapGAppsHook3
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2026-01-20 12:14:56 +01:00
3f1f5ae8f2 Fix changed cudaPackages.cuda_cudart output
See: https://github.com/NixOS/nixpkgs/pull/437723
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2026-01-20 12:14:49 +01:00
fe8586e780 Set pyproject=true in buildPythonApplication
The buildPythonPackage and buildPythonApplication functions now
  require an explicit format attribute. Previously the default format
  used setuptools and called setup.py from the source tree, which is
  deprecated. The modern alternative is to configure pyproject = true
  with build-system = [ setuptools ].

Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2026-01-20 12:14:31 +01:00
8677adba27 Fix renamed llvm bintools
Moved from llvmPackages_latest.tools.bintools to
llvmPackages_latest.bintools

Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2026-01-20 12:14:27 +01:00
f614149edf Upgrade nixpkgs to 25.11
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2026-01-20 12:14:11 +01:00
859eebda98 Change varcila shell to zsh
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2026-01-07 13:22:17 +01:00
c2a201b085 Increase fail2ban ban time on each attempt
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2026-01-07 13:14:34 +01:00
f921f0a4bd Disable password login via SSH in apex
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2026-01-07 13:14:30 +01:00
aa16bfc0bc Enable fail2ban in apex login node
We are seeing a lot of failed attempts from the same IPs:

    apex% sudo journalctl -u sshd -b0 | grep 'Failed password' | wc -l
    2441

Reviewed-by: Aleix Boné <abonerib@bsc.es>
2026-01-07 13:14:22 +01:00
56 changed files with 43245 additions and 879 deletions

6
flake.lock generated
View File

@@ -2,11 +2,11 @@
"nodes": {
"nixpkgs": {
"locked": {
"lastModified": 1764522689,
"narHash": "sha256-SqUuBFjhl/kpDiVaKLQBoD8TLD+/cTUzzgVFoaHrkqY=",
"lastModified": 1767634882,
"narHash": "sha256-2GffSfQxe3sedHzK+sTKlYo/NTIAGzbFCIsNMUPAAnk=",
"owner": "NixOS",
"repo": "nixpkgs",
"rev": "8bb5646e0bed5dbd3ab08c7a7cc15b75ab4e1d0f",
"rev": "3c9db02515ef1d9b6b709fc60ba9a540957f661c",
"type": "github"
},
"original": {

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@@ -57,6 +57,18 @@
};
};
services.fail2ban = {
enable = true;
maxretry = 5;
bantime-increment = {
enable = true; # Double ban time on each attack
maxtime = "7d"; # Ban up to a week
};
};
# Disable SSH login with password, allow only keypair
services.openssh.settings.PasswordAuthentication = false;
networking.firewall = {
extraCommands = ''
# Blackhole BSC vulnerability scanner (OpenVAS) as it is spamming our

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@@ -24,7 +24,7 @@
address = "10.0.40.40";
prefixLength = 24;
} ];
interfaces.ibp5s0.ipv4.addresses = [ {
interfaces.ibs785.ipv4.addresses = [ {
address = "10.0.42.40";
prefixLength = 24;
} ];

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@@ -139,6 +139,7 @@
openssh.authorizedKeys.keys = [
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIKGt0ESYxekBiHJQowmKpfdouw0hVm3N7tUMtAaeLejK vincent@varch"
];
shell = pkgs.zsh;
};
pmartin1 = {

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@@ -1,11 +1,6 @@
{ config, pkgs, lib, ... }:
{ pkgs, lib, ... }:
{
# add the perf tool
environment.systemPackages = with pkgs; [
config.boot.kernelPackages.perf
];
# allow non-root users to read tracing data from the kernel
boot.kernel.sysctl."kernel.perf_event_paranoid" = -2;
boot.kernel.sysctl."kernel.kptr_restrict" = 0;

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@@ -45,7 +45,7 @@
address = "10.0.40.7";
prefixLength = 24;
} ];
interfaces.ibp5s0.ipv4.addresses = [ {
interfaces.ibs785.ipv4.addresses = [ {
address = "10.0.42.7";
prefixLength = 24;
} ];

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@@ -46,7 +46,7 @@
address = "10.0.40.42";
prefixLength = 24;
} ];
interfaces.ibp5s0.ipv4.addresses = [ {
interfaces.ibs785.ipv4.addresses = [ {
address = "10.0.42.42";
prefixLength = 24;
} ];

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@@ -20,7 +20,7 @@
address = "10.0.40.1";
prefixLength = 24;
} ];
interfaces.ibp5s0.ipv4.addresses = [ {
interfaces.ibs785.ipv4.addresses = [ {
address = "10.0.42.1";
prefixLength = 24;
} ];

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@@ -21,7 +21,7 @@
prefixLength = 24;
} ];
# Watch out! The OmniPath device is not in the same place here:
interfaces.ibp129s0.ipv4.addresses = [ {
interfaces.ibs801.ipv4.addresses = [ {
address = "10.0.42.2";
prefixLength = 24;
} ];

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@@ -27,4 +27,7 @@
};
};
};
# Allow gitea user to send mail
users.users.gitea.extraGroups = [ "mail-robot" ];
}

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@@ -12,18 +12,14 @@ let
bench6 = callPackage ./pkgs/bench6/default.nix { };
bigotes = callPackage ./pkgs/bigotes/default.nix { };
clangOmpss2 = callPackage ./pkgs/llvm-ompss2/default.nix { };
clangOmpss2Nanos6 = callPackage ./pkgs/llvm-ompss2/default.nix { ompss2rt = final.nanos6; };
clangOmpss2Nodes = callPackage ./pkgs/llvm-ompss2/default.nix { ompss2rt = final.nodes; openmp = final.openmp; };
clangOmpss2NodesOmpv = callPackage ./pkgs/llvm-ompss2/default.nix { ompss2rt = final.nodes; openmp = final.openmpv; };
clangOmpss2Nanos6 = callPackage ./pkgs/llvm-ompss2/default.nix { useNanos6 = true; };
clangOmpss2Nodes = callPackage ./pkgs/llvm-ompss2/default.nix { useNodes = true; useOpenmp = true; };
clangOmpss2NodesOmpv = callPackage ./pkgs/llvm-ompss2/default.nix { useNodes = true; useOpenmpV = true; };
clangOmpss2Unwrapped = callPackage ./pkgs/llvm-ompss2/clang.nix { };
cudainfo = prev.callPackage ./pkgs/cudainfo/default.nix { };
#extrae = callPackage ./pkgs/extrae/default.nix { }; # Broken and outdated
gpi-2 = callPackage ./pkgs/gpi-2/default.nix { };
intel-apt = callPackage ./pkgs/intel-oneapi/packages.nix { };
intelPackages_2023 = callPackage ./pkgs/intel-oneapi/2023.nix { };
intelPackages_2024 = final.intel-apt.hpckit_2024;
intelPackages_2025 = final.intel-apt.hpckit_2025;
intelPackages = final.intelPackages_2025;
jemallocNanos6 = callPackage ./pkgs/nanos6/jemalloc.nix { };
# FIXME: Extend this to all linuxPackages variants. Open problem, see:
# https://discourse.nixos.org/t/whats-the-right-way-to-make-a-custom-kernel-module-available/4636
@@ -48,26 +44,24 @@ let
#nix-wrap = callPackage ./pkgs/nix-wrap/default.nix { };
nodes = callPackage ./pkgs/nodes/default.nix { };
nosv = callPackage ./pkgs/nosv/default.nix { };
oneMath = callPackage ./pkgs/onemath/default.nix { };
openmp = callPackage ./pkgs/llvm-ompss2/openmp.nix { monorepoSrc = final.clangOmpss2Unwrapped.src; version = final.clangOmpss2Unwrapped.version; };
openmpv = final.openmp.override { enableNosv = true; enableOvni = true; };
osumb = callPackage ./pkgs/osu/default.nix { };
ovni = callPackage ./pkgs/ovni/default.nix { };
ovniGit = final.ovni.override { useGit = true; };
papi = callPackage ./pkgs/papi/default.nix { papi = prev.papi; };
paraverKernel = callPackage ./pkgs/paraver/kernel.nix { };
prometheus-slurm-exporter = prev.callPackage ./pkgs/slurm-exporter/default.nix { };
#pscom = callPackage ./pkgs/parastation/pscom.nix { }; # Unmaintaned
#psmpi = callPackage ./pkgs/parastation/psmpi.nix { }; # Unmaintaned
slurm = import ./pkgs/slurm/default.nix { slurm = prev.slurm; };
sonar = callPackage ./pkgs/sonar/default.nix { };
stdenvClangOmpss2 = final.stdenv.override { cc = final.clangOmpss2; allowedRequisites = null; };
stdenvClangOmpss2Nanos6 = final.stdenv.override { cc = final.clangOmpss2Nanos6; allowedRequisites = null; };
stdenvClangOmpss2Nodes = final.stdenv.override { cc = final.clangOmpss2Nodes; allowedRequisites = null; };
stdenvClangOmpss2NodesOmpv = final.stdenv.override { cc = final.clangOmpss2NodesOmpv; allowedRequisites = null; };
stdenvClangOmpss2 = final.stdenv.override { cc = final.buildPackages.clangOmpss2; allowedRequisites = null; };
stdenvClangOmpss2Nanos6 = final.stdenv.override { cc = final.buildPackages.clangOmpss2Nanos6; allowedRequisites = null; };
stdenvClangOmpss2Nodes = final.stdenv.override { cc = final.buildPackages.clangOmpss2Nodes; allowedRequisites = null; };
stdenvClangOmpss2NodesOmpv = final.stdenv.override { cc = final.buildPackages.clangOmpss2NodesOmpv; allowedRequisites = null; };
tagaspi = callPackage ./pkgs/tagaspi/default.nix { };
tampi = callPackage ./pkgs/tampi/default.nix { };
tasycl = callPackage ./pkgs/tasycl/default.nix { };
tasycl-acpp = callPackage ./pkgs/tasycl/default.nix { useIntel = false; };
upc-qaire-exporter = prev.callPackage ./pkgs/upc-qaire-exporter/default.nix { };
wxparaver = callPackage ./pkgs/paraver/default.nix { };
};
@@ -77,8 +71,6 @@ let
#sigsegv = callPackage ./test/reproducers/sigsegv.nix { };
hello-c = callPackage ./test/compilers/hello-c.nix { };
hello-cpp = callPackage ./test/compilers/hello-cpp.nix { };
hello-sycl = callPackage ./test/compilers/hello-sycl.nix { };
hello-syclompss = callPackage ./test/compilers/icpx-ompss2.nix { };
lto = callPackage ./test/compilers/lto.nix { };
asan = callPackage ./test/compilers/asan.nix { };
intel2023-icx-c = hello-c.override { stdenv = final.intelPackages_2023.stdenv; };
@@ -88,13 +80,6 @@ let
intel2023-ifort = callPackage ./test/compilers/hello-f.nix {
stdenv = final.intelPackages_2023.stdenv-ifort;
};
intel2024-icx-c = hello-c.override { stdenv = final.intelPackages_2024.stdenv; };
intel2025-icx-c = hello-c.override { stdenv = final.intelPackages_2025.stdenv; };
intel2024-icx-cpp = hello-cpp.override { stdenv = final.intelPackages_2024.stdenv; };
intel2025-icx-cpp = hello-cpp.override { stdenv = final.intelPackages_2025.stdenv; };
# intel2023-sycl = hello-sycl.override { intelPackages = final.intelPackages_2023; }; # broken
intel2024-sycl = hello-sycl.override { intelPackages = final.intelPackages_2024; };
intel2025-sycl = hello-sycl.override { intelPackages = final.intelPackages_2025; };
clangOmpss2-lto = lto.override { stdenv = final.stdenvClangOmpss2Nanos6; };
clangOmpss2-asan = asan.override { stdenv = final.stdenvClangOmpss2Nanos6; };
clangOmpss2-task = callPackage ./test/compilers/ompss2.nix {

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@@ -47,6 +47,7 @@ in
inherit version;
src = uprofSrc;
dontStrip = true;
strictDeps = true;
phases = [ "installPhase" "fixupPhase" ];
nativeBuildInputs = [ autoPatchelfHook radare2 ];
buildInputs = [

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@@ -18,8 +18,9 @@ in stdenv.mkDerivation {
set +x
'';
hardeningDisable = [ "pic" "format" ];
strictDeps = true;
nativeBuildInputs = kernel.moduleBuildDependencies;
patches = [ ./makefile.patch ./hrtimer.patch ];
patches = [ ./makefile.patch ./hrtimer.patch ./remove-wr-rdmsrq.patch ];
makeFlags = [
"KERNEL_VERSION=${kernel.modDirVersion}"
"KERNEL_DIR=${kernel.dev}/lib/modules/${kernel.modDirVersion}/build"

View File

@@ -0,0 +1,20 @@
diff --git a/inc/PwrProfAsm.h b/inc/PwrProfAsm.h
index d77770a..c93a0e9 100644
--- a/inc/PwrProfAsm.h
+++ b/inc/PwrProfAsm.h
@@ -347,6 +347,7 @@
#endif
+/*
#define rdmsrq(msr,val1,val2,val3,val4) ({ \
__asm__ __volatile__( \
"rdmsr\n" \
@@ -362,6 +363,7 @@
:"c"(msr), "a"(val1), "d"(val2), "S"(val3), "D"(val4) \
); \
})
+*/
#define rdmsrpw(msr,val1,val2,val3,val4) ({ \
__asm__ __volatile__( \

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@@ -59,6 +59,7 @@ stdenv.mkDerivation rec {
];
hardeningDisable = [ "all" ];
dontStrip = true;
strictDeps = true;
meta = {
homepage = "https://gitlab.pm.bsc.es/rarias/bench6";

View File

@@ -16,6 +16,8 @@ stdenv.mkDerivation {
};
nativeBuildInputs = [ cmake ];
strictDeps = true;
meta = {
homepage = "https://github.com/rodarima/bigotes";
description = "Versatile benchmark tool";

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@@ -10,11 +10,14 @@
stdenv.mkDerivation (finalAttrs: {
name = "cudainfo";
src = ./.;
buildInputs = [
strictDeps = true;
nativeBuildInputs = [
cudatoolkit # Required for nvcc
(lib.getOutput "static" cudaPackages.cuda_cudart) # Required for -lcudart_static
autoAddDriverRunpath
];
buildInputs = [
(lib.getOutput "static" cudaPackages.cuda_cudart) # Required for -lcudart_static
];
installPhase = ''
mkdir -p $out/bin
cp -a cudainfo $out/bin
@@ -23,6 +26,7 @@ stdenv.mkDerivation (finalAttrs: {
name = "cudainfo-test";
requiredSystemFeatures = [ "cuda" ];
dontBuild = true;
strictDeps = true;
nativeCheckInputs = [
finalAttrs.finalPackage # The cudainfo package from above
strace # When it fails, it will show the trace

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@@ -20,7 +20,7 @@
#, python3Packages
, installShellFiles
, symlinkJoin
, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
, enablePapi ? true
}:
let

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@@ -33,6 +33,7 @@ stdenv.mkDerivation rec {
};
enableParallelBuilding = true;
strictDeps = true;
patches = [ ./rdma-core.patch ./max-mem.patch ];

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@@ -40,19 +40,45 @@ let
mpi = "2021.9.0";
};
findMatch = name:
let
aptPackages = builtins.fromJSON (builtins.readFile ./packages.json);
matches = lib.filter (x: name == x.pname) aptPackages;
n = lib.length matches;
match = builtins.traceVerbose (name + " -- ${builtins.toString n}") (builtins.head matches);
aptPackageIndex = stdenv.mkDerivation {
name = "intel-oneapi-packages";
srcs = [
# Run update.sh to update the package lists
./amd64-packages ./all-packages
];
phases = [ "installPhase" ];
installPhase = ''
awk -F': ' '\
BEGIN { print "[ {" } \
NR>1 && /^Package: / { print "} {"; } \
/: / { printf "%s = \"%s\";\n", $1, $2 } \
END { print "} ]" }' $srcs > $out
'';
};
apthost = "https://apt.repos.intel.com/oneapi/";
aptPackages = import aptPackageIndex;
apthost = "https://apt.repos.intel.com/oneapi/";
getSum = pkgList: name:
let
matches = lib.filter (x: name == x.Package) pkgList;
#n = lib.length matches;
#match = builtins.trace (name + " -- ${builtins.toString n}") (lib.elemAt matches 0);
match = lib.elemAt matches 0;
in
{
url = apthost + match.filename;
sha256 = match.sha256;
};
match.SHA256;
getUrl = pkgList: name:
let
matches = lib.filter (x: name == x.Package) pkgList;
#match = assert lib.length matches == 1; lib.elemAt matches 0;
n = lib.length matches;
match =
#builtins.trace (name + " -- n=${builtins.toString n}")
(lib.elemAt matches 0);
in
apthost + match.Filename;
uncompressDebs = debs: name: stdenv.mkDerivation {
name = name;
@@ -72,7 +98,10 @@ let
joinDebs = name: names:
let
debs = builtins.map (x: builtins.fetchurl (findMatch x)) names;
urls = builtins.map (x: getUrl aptPackages x) names;
sums = builtins.map (x: getSum aptPackages x) names;
getsrc = url: sha256: builtins.fetchurl { inherit url sha256; };
debs = lib.zipListsWith getsrc urls sums;
in
uncompressDebs debs "${name}-source";
@@ -99,6 +128,7 @@ let
phases = [ "installPhase" "fixupPhase" ];
dontStrip = true;
strictDeps = true;
installPhase = ''
mkdir -p $out/{bin,etc,lib,include}
mkdir -p $out/share/man
@@ -150,6 +180,7 @@ let
];
phases = [ "installPhase" "fixupPhase" ];
dontStrip = true;
strictDeps = true;
autoPatchelfIgnoreMissingDeps = [ "libhwloc.so.5" ];
@@ -193,6 +224,7 @@ let
];
phases = [ "installPhase" "fixupPhase" ];
dontStrip = true;
strictDeps = true;
autoPatchelfIgnoreMissingDeps = [ "libsycl.so.6" ];
@@ -260,6 +292,7 @@ let
phases = [ "installPhase" "fixupPhase" ];
dontStrip = true;
strictDeps = true;
installPhase = ''
mkdir -p $out/{bin,lib,include}
@@ -348,6 +381,7 @@ let
phases = [ "installPhase" "fixupPhase" ];
dontStrip = true;
strictDeps = true;
installPhase = ''
mkdir -p $out/{bin,lib}
@@ -441,7 +475,7 @@ let
'';
};
ifort-wrapper = wrapIntel {
ifort-wrapper = wrapIntel rec {
cc = intel-compiler-fortran;
mygcc = gcc;
extraBuild = ''

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@@ -1,204 +0,0 @@
{ lib
, stdenv
, callPackage
, dpkg
, fetchurl
, sqlite
, elfutils
}:
let
inherit (builtins)
elem attrNames attrValues concatMap filter fromJSON getAttr groupBy head isNull listToAttrs map mapAttrs readFile replaceStrings splitVersion ;
inherit (lib)
converge findFirst groupBy' hasPrefix optional pipe take toInt toList versionAtLeast versionOlder ;
aptData = fromJSON (readFile ./packages.json);
# Compare versions in debian control file syntax
# See: https://www.debian.org/doc/debian-policy/ch-relationships.html#syntax-of-relationship-fields
#
# NOTE: this is not a proper version comparison
#
# A proper version solver, should aggregate dependencies with the same name
# and compute the constraint (e.g. a (>= 2) a (<< 5) -> 2 <= a << 5)
#
# But in the intel repo, there are no such "duplicated" dependencies to specify
# upper limits, which leads to issues when intel-hpckit-2021 depends on things
# like intel-basekit >= 2021.1.0-2403 and we end up installing the newest
# basekit instead of the one from 2021.
#
# To mitigate this, >= is set to take the latest version with matching major
# and minor (only revision and patch are allowed to change)
compareVersions = got: kind: want:
let
g0 = take 2 (splitVersion got);
w0 = take 2 (splitVersion want);
in if isNull want then true
else if kind == "=" then got == want
else if kind == "<<" then versionOlder got want
else if kind == "<=" then versionAtLeast want got
else if kind == ">>" then versionOlder want got
else if kind == ">=" then (g0 == w0) && versionAtLeast got want # always match major version
else throw "unknown operation: ${kind}";
findMatching = { pname, kind, version }:
findFirst (x: pname == x.pname && compareVersions x.version kind version) null aptData;
isIntel = pkg: (hasPrefix "intel-" pkg.pname);
expandDeps = pkg: (map findMatching (filter isIntel pkg.dependencies)) ++ (optional (pkg.size != 0) pkg);
# get the oldest by major version. If they have the same major version, take
# the newest. This prevents most issues with resolutions
# versionOlder b a -> true if b is older than a (b `older` a)
getNewerInMajor = a: b: let
va = a.version;
vb = b.version;
va0 = head (splitVersion va);
vb0 = head (splitVersion vb);
in
if isNull a then b
else if va0 != vb0 then
if va0 > vb0 then b else a
else if versionOlder vb va then a else b;
removeDups = l: attrValues (groupBy' getNewerInMajor null (getAttr "provides") l);
_resolveDeps = converge (l: removeDups (concatMap expandDeps l));
resolveDeps = pkg: let deps = _resolveDeps (toList pkg);
namedDeps = (map (x: "${x.pname}-${x.version}") deps);
in builtins.traceVerbose (builtins.deepSeq namedDeps namedDeps) deps;
blacklist = [
"intel-basekit-env"
"intel-basekit-getting-started"
"intel-hpckit-env"
"intel-hpckit-getting-started"
"intel-oneapi-advisor"
"intel-oneapi-common-licensing"
"intel-oneapi-common-oneapi-vars"
"intel-oneapi-common-vars"
"intel-oneapi-compiler-cpp-eclipse-cfg"
"intel-oneapi-compiler-dpcpp-eclipse-cfg"
"intel-oneapi-condaindex"
"intel-oneapi-dev-utilities-eclipse-cfg"
"intel-oneapi-dpcpp-ct-eclipse-cfg"
"intel-oneapi-eclipse-ide"
"intel-oneapi-hpc-toolkit-getting-started"
"intel-oneapi-icc-eclipse-plugin-cpp"
"intel-oneapi-vtune"
"intel-oneapi-vtune-eclipse-plugin-vtune"
];
isInBlacklist = pkg: elem pkg.provides blacklist;
removeBlacklist = filter (e: !(isInBlacklist e));
dpkgExtractAll = pname: version: {srcs, deps}: stdenv.mkDerivation {
inherit pname version srcs;
nativeBuildInputs = [ dpkg ];
phases = [ "installPhase" ];
passthru = { inherit deps; };
installPhase = ''
mkdir -p $out
for src in $srcs; do
echo "Unpacking $src"
dpkg -x $src $out
done
'';
};
apthost = "https://apt.repos.intel.com/oneapi/";
fetchDeb = p: fetchurl { url = apthost + p.filename; inherit (p) sha256; };
buildIntel = pkg: pipe pkg [
resolveDeps
removeBlacklist
(l: {srcs = map fetchDeb l; deps = l; })
(dpkgExtractAll "${pkg.provides}-extracted" pkg.version)
];
findHpcKit = year: findMatching { pname = "intel-hpckit"; kind = "<<"; version = toString (year+1); };
years = map toInt (attrNames components);
patchIntel = callPackage ./patch_intel.nix { };
# Version information for each hpckit. This is used to normalize the paths
# so that files are in $out/{bin,lib,include...} instead of all over the place
# in $out/opt/intel/oneapi/*/*/{...}.
#
# The most important is the compiler component, which is used to build the
# stdenv for the hpckit.
#
# NOTE: this have to be manually specified, so we can avoid IFD. To add a
# new version, add a new field with an empty attrset, (e.g. "2026" = {}; ),
# build hpckit_2026.unpatched and use the values from
# result/opt/intel/oneapi/* to populate the attrset.
#
# WARN: if there are more than one version in the folders of the unpatched
# components, our dependency resolution hacks have probably failed and the
# package set may be broken.
components = {
"2025" = {
ishmem = "1.4";
pti = "0.13";
tcm = "1.4";
umf = "0.11";
ccl = "2021.16";
compiler = "2025.2";
dal = "2025.8";
debugger = "2025.2";
dev-utilities = "2025.2";
dnnl = "2025.2";
dpcpp-ct = "2025.2";
dpl = "2022.9";
ipp = "2022.2";
ippcp = "2025.2";
mkl = "2025.2";
mpi = "2021.16";
tbb = "2022.2";
};
"2024" = {
tcm = "1.1";
ccl = "2021.13";
compiler = "2024.2";
dal = "2024.6";
debugger = "2024.2";
dev-utilities = "2024.2";
diagnostics = "2024.2";
dnnl = "2024.2";
dpcpp-ct = "2024.2";
dpl = "2022.6";
ipp = "2021.12";
ippcp = "2021.12";
mkl = "2024.2";
mpi = "2021.13";
tbb = "2021.13";
extraPackages = [
sqlite
elfutils
];
};
};
replaceDots = replaceStrings ["."] ["_"];
in lib.recurseIntoAttrs (listToAttrs (map (year: let
year_str = toString year;
in {
name = "hpckit_${year_str}";
value = patchIntel {unpatched = buildIntel (findHpcKit year); components = components.${year_str}; };
}) years)) // {
apt = pipe aptData [
(groupBy (p: replaceDots p.provides))
(mapAttrs (_: l: listToAttrs (map (pkg: { name = replaceDots ("v" + pkg.version); value = pkg; }) l)))
] ;
inherit resolveDeps patchIntel buildIntel;
}

View File

@@ -1,174 +0,0 @@
{ stdenv
, stdenvNoCC
, lib
, symlinkJoin
, autoPatchelfHook
, wrapCCWith
, overrideCC
, gcc
, hwloc
, libelf
, libffi_3_3
, libpsm2
, libuuid
, libxml2
, numactl
, ocl-icd
, openssl
, python3
, rdma-core
, ucx
, zlib
}:
lib.makeOverridable (
{
unpatched,
components ? { },
extraPackages ? components.extraPackages or []
}:
let
inherit (builtins) attrValues filter mapAttrs removeAttrs;
__components = removeAttrs components ["extraPackages"];
_components = __components;
# _components = lib.traceSeqN 2 {
# inherit unpatched __components;
# deps = builtins.map (x: "${x.pname}-${x.version}") unpatched.deps;
# } __components;
wrapIntel = { cc, extraBuildCommands ? "", extraInstall ? "", ... }@args:
let
targetConfig = stdenv.targetPlatform.config;
in (wrapCCWith {
inherit cc;
extraBuildCommands = ''
echo "-L${gcc.cc}/lib/gcc/${targetConfig}/${gcc.version}" >> $out/nix-support/cc-ldflags
echo "-L${gcc.cc.lib}/lib" >> $out/nix-support/cc-ldflags
echo "-L${cc}/lib" >> $out/nix-support/cc-ldflags
# echo "--gcc-toolchain=${gcc.cc}" >> $out/nix-support/libcxx-cxxflags
echo "--gcc-toolchain=${gcc.cc}" >> $out/nix-support/cc-cflags
# For some reason, If we don't resolve the realpath things go wrong
for stddef in ${cc}/lib/clang/*/include/stddef.h ; do
dir=$(dirname $(realpath "$stddef"))
echo "-isystem $dir" >> $out/nix-support/cc-cflags
done
echo "-isystem ${cc}/include" >> $out/nix-support/cc-cflags
echo "-isystem ${cc}/include/intel64" >> $out/nix-support/cc-cflags
for dir in ${gcc.cc}/lib/gcc/${targetConfig}/*/include; do
echo "-isystem $dir" >> $out/nix-support/cc-cflags
done
for dir in ${gcc.cc}/include/c++/*; do
echo "-isystem $dir" >> $out/nix-support/libcxx-cxxflags
done
for dir in ${gcc.cc}/include/c++/*/${targetConfig}; do
echo "-isystem $dir" >> $out/nix-support/libcxx-cxxflags
done
# FIXME: We should find a better way to modify the PATH instead of using
# this ugly hack. See https://jungle.bsc.es/git/rarias/bscpkgs/issues/9
echo 'path_backup="${gcc.cc}/bin:$path_backup"' >> $out/nix-support/cc-wrapper-hook
# Disable hardening by default
echo "" > $out/nix-support/add-hardening.sh
'' + extraBuildCommands;
} // (removeAttrs args ["cc" "extraBuildCommands" "extraInstall"])
).overrideAttrs (old: {
installPhase = old.installPhase + extraInstall;
});
in
stdenvNoCC.mkDerivation (finalAttrs: {
pname = lib.removeSuffix "-extracted" unpatched.pname;
inherit (unpatched) version;
src = unpatched;
phases = [ "installPhase" "fixupPhase" ];
buildInputs = [
libffi_3_3
libelf
libxml2
hwloc
numactl
libuuid
libpsm2
zlib
ocl-icd
rdma-core
ucx
openssl
python3
stdenv.cc.cc.lib
] ++ extraPackages;
autoPatchelfIgnoreMissingDeps = [ "libhwloc.so.5" "libcuda.so.1" "libze_loader.so.1" ];
# There are broken symlinks that go outside packages, ignore them
dontCheckForBrokenSymlinks = true;
nativeBuildInputs = [ autoPatchelfHook ];
installPhase = ''
cp -r $src/opt/intel/oneapi/ $out
'';
passthru = let
pkgs = mapAttrs
(folder: version: symlinkJoin {
pname = "intel-${folder}";
inherit version;
paths = ["${finalAttrs.finalPackage}/${folder}/${version}"];
})
_components;
in pkgs // {
inherit unpatched;
pkgs = lib.recurseIntoAttrs pkgs;
components = _components;
# This contains all packages properly symlinked into toplevel directories
# in $out.
#
# NOTE: there are clashes with packages that have symlinks outside their
# scope (libtcm and env/vars.sh)
all = symlinkJoin {
pname = finalAttrs.finalPackage + "-symlinked";
inherit (finalAttrs.finalPackage) version;
paths = filter lib.isDerivation (attrValues finalAttrs.finalPackage.pkgs);
};
stdenv = overrideCC stdenv finalAttrs.finalPackage.cc;
cc = wrapIntel {
cc = finalAttrs.finalPackage.pkgs.compiler;
extraBuildCommands = ''
wrap icx $wrapper $ccPath/icx
wrap icpx $wrapper $ccPath/icpx
wrap ifx $wrapper $ccPath/ifx
ln -s $out/bin/icpx $out/bin/c++
ln -s $out/bin/icx $out/bin/cc
# Use this to detect when a compiler subprocess is called
# from icpx (--fsycl-host-compiler)
echo 'export "NIX_CC_WRAPPER_INTEL=1"' >> $out/nix-support/cc-wrapper-hook
sed -i 's/.*isCxx=0/isCxx=1/' $out/bin/icpx
# oneMath looks for sycl libraries in bin/../lib
ln -s ${finalAttrs.finalPackage.pkgs.compiler}/lib $out/lib
ln -s ${finalAttrs.finalPackage.pkgs.compiler}/include $out/include
'';
extraInstall = ''
export named_cc="icx"
export named_cxx="icpx"
export named_fc="ifx"
'';
};
};
}))

View File

@@ -1,29 +0,0 @@
#!/usr/bin/env -S jq -f
def extract_fields: {
pname : .Package,
version : .Version,
provides : .Package | sub("[0-9.-]*$"; ""),
filename : .Filename,
size : ."Installed-Size" | tonumber,
sha256 : .SHA256,
dependencies : .Depends,
} ;
# parses dependencies into a list of [{.pname, .kind, .version}]
# some dependencies do not have a version specified, in which case, kind = version = null
#
# example dependencies:
# intel-oneapi-common-vars (>= 2023.0.0-25325), intel-oneapi-common-licensing-2023.0.0
def split_dependencies : map(try(.dependencies |= split(",\\s?"; "")) // .dependencies |= []) ;
def match_version : capture("(?<pname>[a-zA-Z0-9_\\-.]*) *(\\((?<kind>[<>=]*) *(?<version>.*)\\))?"; "") ;
def parse_dependencies : map_values(.dependencies.[] |= match_version) ;
def sort_version_decreasing : sort_by(.version | split("[-.]"; "") | map(tonumber)) | reverse ;
map(extract_fields) | split_dependencies | parse_dependencies | sort_version_decreasing
# [.[] | select(.pname == "intel-hpckit") | .version]

View File

@@ -1,29 +0,0 @@
#!/usr/bin/env -S awk -f
BEGIN {
FS=": "
prev_empty=1
t=" "
print "[ {"
}
!NF { # empty line, update separator so next non empty line closes the dict
prev_empty=1
t="},\n{ "
next # skip line (we won't match anything else)
}
{
printf t "\"%s\" : \"%s\"\n", $1, $2
if (prev_empty) {
# we were the first after a group of empty lines, following ones have to
# have a comma
prev_empty=0
t=", "
}
}
END { print "} ]" }

View File

@@ -1,11 +1,4 @@
#!/bin/sh
out_64=$(mktemp intel-api.64.XXXXXX)
out_all=$(mktemp intel-api.all.XXXXXX)
trap 'rm -f "$out_64" "$out_all"' EXIT INT HUP
curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-amd64/Packages -o "$out_64"
curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-all/Packages -o "$out_all"
# NOTE: we use `jq -r tostring` to minify the json (3.2Mb -> 2.3Mb)
cat "$out_64" "$out_all" | ./toJson.awk | ./process.jq | jq -r tostring >packages.json
curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-amd64/Packages -o amd64-packages
curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-all/Packages -o all-packages

View File

@@ -1,9 +1,9 @@
{
llvmPackages_latest
stdenv
, llvmPackages_latest
, lib
, fetchFromGitHub
, cmake
, bash
, python3
, perl
, which
@@ -11,7 +11,6 @@
, libffi
, zlib
, pkg-config
, gcc # needed to set the rpath of libstdc++ for clang-tblgen
, enableDebug ? false
, useGit ? false
, gitUrl ? "ssh://git@bscpm04.bsc.es/llvm-ompss/llvm-mono.git"
@@ -20,7 +19,10 @@
}:
let
stdenv = llvmPackages_latest.stdenv;
llvmPackages = llvmPackages_latest;
llvmStdenv = llvmPackages.stdenv;
# needed to set the rpath of libstdc++ for clang-tblgen
gcc = stdenv.cc;
release = rec {
version = "2025.11";
@@ -43,11 +45,12 @@ let
source = if (useGit) then git else release;
in stdenv.mkDerivation {
in llvmStdenv.mkDerivation {
pname = "clang-ompss2";
inherit (source) src version;
enableParallelBuilding = true;
strictDeps = true;
passthru = {
CC = "clang";
@@ -60,13 +63,12 @@ in stdenv.mkDerivation {
};
nativeBuildInputs = [
bash
cmake
elfutils
llvmPackages_latest.lld
llvmPackages.lld
perl
pkg-config
python3
perl
which
zlib
];
@@ -97,8 +99,13 @@ in stdenv.mkDerivation {
cd build
cmakeDir="../llvm"
cmakeFlagsArray=(
"-DLLVM_HOST_TRIPLE=${stdenv.targetPlatform.config}"
"-DLLVM_HOST_TRIPLE=${llvmStdenv.targetPlatform.config}"
'' + (if "${llvmStdenv.targetPlatform.config}" == "riscv64-unknown-linux-gnu" then ''
"-DLLVM_DEFAULT_TARGET_TRIPLE=riscv64-unknown-linux-gnu"
"-DLLVM_TARGETS_TO_BUILD=RISCV"
'' else ''
"-DLLVM_TARGETS_TO_BUILD=host"
'') + ''
"-DLLVM_BUILD_LLVM_DYLIB=ON"
"-DLLVM_LINK_LLVM_DYLIB=ON"
# Required to run clang-ast-dump and clang-tblgen during build
@@ -107,7 +114,8 @@ in stdenv.mkDerivation {
"-DCMAKE_CXX_FLAGS_DEBUG=-g -ggnu-pubnames"
"-DCMAKE_EXE_LINKER_FLAGS_DEBUG=-Wl,--gdb-index"
"-DLLVM_LIT_ARGS=-sv --xunit-xml-output=xunit.xml"
"-DLLVM_ENABLE_PROJECTS=clang;compiler-rt;lld"
"-DLLVM_ENABLE_PROJECTS=clang;lld"
"-DLLVM_ENABLE_RUNTIMES=compiler-rt"
"-DLLVM_ENABLE_ASSERTIONS=ON"
"-DLLVM_INSTALL_TOOLCHAIN_ONLY=ON"
"-DCMAKE_INSTALL_BINDIR=bin"

View File

@@ -3,26 +3,42 @@
, lib
, gcc
, clangOmpss2Unwrapped
, writeShellScript
, openmp ? null
, openmp
, useOpenmp ? false
, openmpv
, useOpenmpV ? false
, nanos6
, useNanos6 ? false
, nodes
, useNodes ? false
, wrapCCWith
, llvmPackages_latest
, ompss2rt ? null
}:
with lib;
let
usingNodesAndOmpv = (openmp.pname == "openmp-v" && ompss2rt.pname == "nodes");
sameNosv = openmp.nosv == ompss2rt.nosv;
getSplice = target: pkg: if pkg ? "__spliced" && pkg.__spliced ? target then pkg.__spliced."${target}" else pkg;
getSpliceTargetTarget = getSplice "targetTarget";
omp = if useOpenmp then openmp else if useOpenmpV then openmpv else null;
ompss2rtUnspliced = if useNanos6 then nanos6 else if useNodes then nodes else null;
ompss2rt = getSpliceTargetTarget ompss2rtUnspliced;
usingNodesAndOmpv = omp != null && ompss2rt != null && (omp.pname == "openmp-v" && ompss2rt.pname == "nodes");
sameNosvUnspliced = omp != null && ompss2rtUnspliced != null && omp.nosv == ompss2rtUnspliced.nosv;
sameNosvSpliced = (getSpliceTargetTarget omp.nosv) == ompss2rt.nosv;
in
assert assertMsg (usingNodesAndOmpv -> sameNosv) "OpenMP-V and NODES must share the same nOS-V";
assert assertMsg (usingNodesAndOmpv -> sameNosvUnspliced) "OpenMP-V and NODES must share the same nOS-V before splice";
assert assertMsg (usingNodesAndOmpv -> sameNosvSpliced) "OpenMP-V and NODES must share the same nOS-V after splice";
assert assertMsg (useOpenmp -> !useOpenmpV) "Either OpenMP or OpenMP-V may be enabled, but not both";
assert assertMsg (useNanos6 -> !useNodes) "Either Nanos6 or NODES may be enabled, but not both";
let
homevar = if ompss2rt.pname == "nanos6" then "NANOS6_HOME" else "NODES_HOME";
rtname = if ompss2rt.pname == "nanos6" then "libnanos6" else "libnodes";
ompname = if openmp.pname == "openmp-v" then "libompv" else "libomp";
ompname = if omp.pname == "openmp-v" then "libompv" else "libomp";
# We need to replace the lld linker from bintools with our linker just built,
@@ -38,7 +54,10 @@ let
inherit gcc;
cc = clangOmpss2Unwrapped;
gccVersion = with versions; let v = gcc.version; in concatStringsSep "." [(major v) (minor v) (patch v)];
in (wrapCCWith {
inherit cc bintools;
# extraPackages adds packages to depsTargetTargetPropagated
extraPackages = optional (omp != null) omp;
extraBuildCommands = ''
echo "-target ${targetConfig}" >> $out/nix-support/cc-cflags
echo "-B${gcc.cc}/lib/gcc/${targetConfig}/${gccVersion}" >> $out/nix-support/cc-cflags
@@ -54,51 +73,15 @@ let
echo "--gcc-toolchain=${gcc}" >> $out/nix-support/cc-cflags
wrap clang++ $wrapper $ccPath/clang++
wrap ${targetConfig}clang++ $wrapper $ccPath/clang++
wrap ${targetConfig}clang $wrapper $ccPath/clang
'' + optionalString (omp != null) ''
echo "export OPENMP_RUNTIME=${ompname}" >> $out/nix-support/cc-wrapper-hook
'' + optionalString (ompss2rt != null) ''
echo "export OMPSS2_RUNTIME=${rtname}" >> $out/nix-support/cc-wrapper-hook
echo "export ${homevar}=${ompss2rt}" >> $out/nix-support/cc-wrapper-hook
'' + optionalString (ompss2rt != null && ompss2rt.pname == "nodes") ''
echo "export NOSV_HOME=${ompss2rt}" >> $out/nix-support/cc-wrapper-hook
'';
envExports = lib.optionalString (openmp != null) ''
echo "export OPENMP_RUNTIME=${ompname}" >> $out/nix-support/cc-wrapper-hook
'' + optionalString (ompss2rt != null) ''
echo "export OMPSS2_RUNTIME=${rtname}" >> $out/nix-support/cc-wrapper-hook
echo "export ${homevar}=${ompss2rt}" >> $out/nix-support/cc-wrapper-hook
'' + optionalString (ompss2rt != null && ompss2rt.pname == "nodes") ''
echo "export NOSV_HOME=${ompss2rt.nosv}" >> $out/nix-support/cc-wrapper-hook
'';
extraPackages = optional (openmp != null) openmp;
wrappedCC = wrapCCWith {
# extraPackages adds packages to depsTargetTargetPropagated
inherit cc bintools extraPackages;
extraBuildCommands = extraBuildCommands + envExports;
};
resetIntelCCFlags = let tconf = builtins.replaceStrings ["-"] ["_"] targetConfig;
in writeShellScript "remove-intel.sh" ''
if [ "''${NIX_CC_WRAPPER_INTEL:-0}" = 1 ]; then
unset NIX_CFLAGS_COMPILE_${tconf}
unset NIX_CC_WRAPPER_FLAGS_SET_${tconf}
if (( "''${NIX_DEBUG:-0}" >= 1 )); then
echo "ompss2: cleaned NIX_CFLAGS_COMPILE_${tconf} (invokation from intel compiler detected)"
fi
fi
'';
intelExtraBuildCommands = ''
sed -i 's|# Flirting.*|source ${resetIntelCCFlags}\n\n&|' $out/bin/clang
sed -i 's|# Flirting.*|source ${resetIntelCCFlags}\n\n&|' $out/bin/clang++
'';
wrappedCCIntel = wrapCCWith {
inherit cc bintools extraPackages;
# extraPackages adds packages to depsTargetTargetPropagated
extraBuildCommands = intelExtraBuildCommands + envExports;
};
in wrappedCC.overrideAttrs (oldAttrs: {
passthru = oldAttrs.passthru // {
forIcpx = wrappedCCIntel;
};
})
}).overrideAttrs (prev: { passthru = (prev.passthru or {}) // { inherit ompss2rt; }; })

View File

@@ -39,7 +39,9 @@ stdenv.mkDerivation rec {
perl
pkg-config
python3
] ++ lib.optionals enableNosv [
];
buildInputs = lib.optionals enableNosv [
nosv
] ++ lib.optionals enableOvni [
ovni
@@ -54,6 +56,7 @@ stdenv.mkDerivation rec {
dontStrip = enableDebug;
separateDebugInfo = true;
strictDeps = true;
cmakeFlags = [
"-DLIBOMP_OMPD_SUPPORT=OFF"
@@ -71,6 +74,28 @@ stdenv.mkDerivation rec {
rm -f $out/libllvmrt/libomp.*
'';
doInstallCheck = true;
# There are not cmake flags to force nOS-V, it enables it when found through
# pkg-config. If enableNosv is set, but we fail to find it at build time,
# the build will succeed but won't use nOS-V (libompv won't be created).
# This is a sanity check to ensure that after install we have the proper
# files.
installCheckPhase =
if enableNosv then
''
test -f $out/lib/libompv.so
test -f $out/libllvmrt/libompv.so
test ! -f $out/lib/libomp.so
test ! -f $out/libllvmrt/libomp.so
''
else
''
test -f $out/lib/libomp.so
test -f $out/libllvmrt/libomp.so
test ! -f $out/lib/libompv.so
test ! -f $out/libllvmrt/libompv.so
'';
passthru = {
inherit nosv;
};

View File

@@ -27,6 +27,7 @@ stdenv.mkDerivation rec {
hardeningDisable = [ "all" ];
enableParallelBuilding = false;
strictDeps = true;
preBuild = ''
makeFlagsArray+=(

View File

@@ -9,6 +9,7 @@ python3Packages.buildPythonApplication {
src = ./.;
doCheck = false;
strictDeps = true;
build-system = with python3Packages; [
setuptools

View File

@@ -53,6 +53,7 @@ in mpich.overrideAttrs (old: {
'';
hardeningDisable = [ "all" ];
strictDeps = true;
meta = old.meta // {
maintainers = old.meta.maintainers ++ (with lib.maintainers.bsc; [ rarias ]);

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@@ -16,7 +16,7 @@
, jemallocNanos6 ? null
, cachelineBytes ? 64
, enableGlibcxxDebug ? false
, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
, enablePapi ? true
, useGit ? false
, gitUrl ? "ssh://git@bscpm04.bsc.es/nanos6/nanos6"
, gitBranch ? "master"
@@ -80,7 +80,8 @@ in
(optional enableGlibcxxDebug "CXXFLAGS=-D_GLIBCXX_DEBUG") ++
# Most nanos6 api symbols are resolved at runtime, so prefer
# ifunc by default
(optional isCross "--with-symbol-resolution=ifunc");
(optional isCross "--with-symbol-resolution=ifunc") ++
(optional enablePapi "--with-papi=${papi}");
postConfigure = lib.optionalString (!enableDebug) ''
# Disable debug
@@ -95,16 +96,14 @@ in
dontStrip = enableDebug;
separateDebugInfo = true;
strictDeps = true;
nativeBuildInputs = [
autoconf
automake
libtool
pkg-config
# TODO: papi_version is needed for configure:
# ./configure: line 27378: papi_version: command not found
# This probably breaks cross-compilation
] ++ lib.optionals enablePapi [ papi ];
];
buildInputs = [
boost

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@@ -8,6 +8,7 @@ stdenv.mkDerivation {
version = "0.0.1";
src = ./nixgen;
dontUnpack = true;
strictDeps = true;
phases = [ "installPhase" ];
installPhase = ''
mkdir -p $out/bin

View File

@@ -16,6 +16,7 @@ stdenv.mkDerivation rec {
makeFlags = [ "DESTDIR=$(out)" ];
preBuild = "env";
dontPatchShebangs = true;
strictDeps = true;
meta = {
homepage = "https://gitlab.pm.bsc.es/rarias/nixtools";

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@@ -48,6 +48,7 @@ in
enableParallelBuilding = true;
dontStrip = true;
separateDebugInfo = true;
strictDeps = true;
configureFlags = [
"--with-nosv=${nosv}"

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@@ -7,7 +7,7 @@
, numactl
, hwloc
, papi
, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
, enablePapi ? true
, cacheline ? 64 # bits
, ovni ? null
, useGit ? false
@@ -40,16 +40,17 @@ let
source = if (useGit) then git else release;
in
stdenv.mkDerivation rec {
stdenv.mkDerivation {
pname = "nosv";
inherit (source) src version;
hardeningDisable = [ "all" ];
dontStrip = true;
separateDebugInfo = true;
strictDeps = true;
configureFlags = [
"--with-ovni=${ovni}"
"CACHELINE_WIDTH=${toString cacheline}"
];
] ++ lib.optionals enablePapi [ "--with-papi=${papi}" ];
nativeBuildInputs = [
autoreconfHook
pkg-config
@@ -59,6 +60,7 @@ in
hwloc
ovni
] ++ lib.optionals enablePapi [ papi ];
patches = [ ./fix-papi.patch ];
meta = {
homepage = "https://gitlab.bsc.es/nos-v/nos-v";

136
pkgs/nosv/fix-papi.patch Normal file
View File

@@ -0,0 +1,136 @@
Commit ID: c09633f172ce4075e0a05a33f6dcbe8e03e1202a
Change ID: onmwypnnrysktutwsvotqovzponvwrxs
Bookmarks: fix/papi fix/papi@git fix/papi@origin
Author : Aleix Boné <aleix.boneribo@bsc.es> (2025-12-10 11:14:14)
Committer: Aleix Boné <aleix.boneribo@bsc.es> (2025-12-12 12:56:48)
Improve PAPI m4 module for cross compilation
diff --git a/m4/papi.m4 b/m4/papi.m4
index de90584870..8398f856f5 100644
--- a/m4/papi.m4
+++ b/m4/papi.m4
@@ -1,6 +1,6 @@
# This file is part of Nanos6 and is licensed under the terms contained in the COPYING file.
#
-# Copyright (C) 2021-2022 Barcelona Supercomputing Center (BSC)
+# Copyright (C) 2021-2025 Barcelona Supercomputing Center (BSC)
AC_DEFUN([AC_CHECK_PAPI],
[
@@ -8,34 +8,38 @@
[papi],
[AS_HELP_STRING([--with-papi=prefix], [specify the installation prefix of PAPI])],
[ ac_cv_use_papi_prefix=$withval ],
- [ ac_cv_use_papi_prefix="" ]
+ [ ac_cv_use_papi_prefix="check" ]
)
if test x"${ac_cv_use_papi_prefix}" = x"no"; then
AC_MSG_CHECKING([the PAPI installation prefix])
AC_MSG_RESULT([${ac_cv_use_papi_prefix}])
ac_use_papi=no
- elif test x"${ac_cv_use_papi_prefix}" != x"" ; then
- AC_MSG_CHECKING([the PAPI installation prefix])
- AC_MSG_RESULT([${ac_cv_use_papi_prefix}])
- papi_LIBS="-L${ac_cv_use_papi_prefix}/lib -lpapi -Wl,-rpath,${ac_cv_use_papi_prefix}/lib"
- papi_CFLAGS="-I$ac_cv_use_papi_prefix/include"
- ac_use_papi=yes
- else
+ elif test x"${ac_cv_use_papi_prefix}" = x""; then
+ AC_MSG_RESULT([invalid prefix])
+ AC_MSG_ERROR([papi prefix specified but empty])
+ elif test x"${ac_cv_use_papi_prefix}" = x"yes" -o x"${ac_cv_use_papi_prefix}" = x"check"; then
PKG_CHECK_MODULES(
[papi],
- [papi],
+ [papi >= 5.6.0],
[
AC_MSG_CHECKING([the PAPI installation prefix])
AC_MSG_RESULT([retrieved from pkg-config])
papi_CFLAGS="${papi_CFLAGS}"
ac_use_papi=yes
+ ac_papi_version_correct=yes
], [
AC_MSG_CHECKING([the PAPI installation prefix])
AC_MSG_RESULT([not available])
ac_use_papi=no
]
)
+ else
+ AC_MSG_CHECKING([the PAPI installation prefix])
+ AC_MSG_RESULT([${ac_cv_use_papi_prefix}])
+ papi_LIBS="-L${ac_cv_use_papi_prefix}/lib -lpapi -Wl,-rpath,${ac_cv_use_papi_prefix}/lib"
+ papi_CFLAGS="-I$ac_cv_use_papi_prefix/include"
+ ac_use_papi=yes
fi
if test x"${ac_use_papi}" = x"yes" ; then
@@ -53,10 +57,10 @@
ac_use_papi=yes
],
[
- if test x"${ac_cv_use_papi_prefix}" != x"" ; then
- AC_MSG_ERROR([PAPI cannot be found.])
+ if test x"${ac_cv_use_papi_prefix}" = x"yes" ; then
+ AC_MSG_ERROR([PAPI >= 5.6.0 cannot be found.])
else
- AC_MSG_WARN([PAPI cannot be found.])
+ AC_MSG_WARN([PAPI >= 5.6.0 not available.])
fi
ac_use_papi=no
]
@@ -64,30 +68,38 @@
CFLAGS="${ac_save_CFLAGS}"
LIBS="${ac_save_LIBS}"
+ elif test x"${ac_cv_use_papi_prefix}" = x"yes" ; then
+ AC_MSG_ERROR([PAPI >= 5.6.0 cannot be found.])
fi
- if test x"${ac_use_papi}" = x"yes" ; then
- if test x"${ac_cv_use_papi_prefix}" != x"" ; then
+ if test x"${ac_use_papi}" = x"yes" -a x"${ac_papi_version_correct}" != x"yes" ; then
+ if test x"${ac_cv_use_papi_prefix}" != x"yes" -a x"${ac_cv_use_papi_prefix}" != x"check" ; then
papiBinary=${ac_cv_use_papi_prefix}/bin/papi_version
else
papiBinary=papi_version
fi
- papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
- AX_COMPARE_VERSION(
- [[${papiVersion}]],
- [[ge]],
- [[5.6.0]],
- [[ac_papi_version_correct=yes]],
- [[ac_papi_version_correct=no]]
- )
- if test x"${ac_papi_version_correct}" != x"yes" ; then
- AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
- ac_use_papi=no
+ if test x"$cross_compiling" = x"yes" ; then
+ AC_MSG_WARN([Cross-compiling detected, skipping PAPI version check])
else
- AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
- AC_MSG_RESULT([${ac_papi_version_correct}])
+ papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
+
+ AX_COMPARE_VERSION(
+ [[${papiVersion}]],
+ [[ge]],
+ [[5.6.0]],
+ [[ac_papi_version_correct=yes]],
+ [[ac_papi_version_correct=no]]
+ )
+
+ if test x"${ac_papi_version_correct}" != x"yes" ; then
+ AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
+ ac_use_papi=no
+ else
+ AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
+ AC_MSG_RESULT([${ac_papi_version_correct}])
+ fi
fi
fi

View File

@@ -1,84 +0,0 @@
{ lib
, fetchFromGitHub
, cmake
, withCFlags
, intelPackages
, mklSupport ? true
, config
, cudaSupport ? config.cudaSupport
, cudaPackages ? { }
, rocmSupport ? config.rocmSupport
, hipTargets ? null # only one target at a time supported
, rocmPackages ? { }
}:
let
# rocmSupport is not enough, we need a specific target
enableHip = rocmSupport && hipTargets != null;
stdenv = withCFlags (lib.optionals cudaSupport [ "--cuda-path=${cudaPackages.cudatoolkit}" ]) intelPackages.stdenv;
in
# at least one backend has to be enabled
assert mklSupport || cudaSupport || enableHip;
stdenv.mkDerivation rec {
pname = "oneMath";
version = "0.8";
src = fetchFromGitHub {
owner = "uxlfoundation";
repo = "oneMath";
rev = "v${version}";
sha256 = "sha256-xK8lKI3oqKlx3xtvdScpMq+HXAuoYCP0BZdkEqnJP5o=";
};
cmakeFlags = [
(lib.cmakeBool "ENABLE_MKLCPU_BACKEND" mklSupport)
(lib.cmakeBool "ENABLE_MKLGPU_BACKEND" mklSupport)
(lib.cmakeBool "ENABLE_CUBLAS_BACKEND" cudaSupport)
(lib.cmakeBool "ENABLE_CUFFT_BACKEND" cudaSupport)
(lib.cmakeBool "ENABLE_CURAND_BACKEND" cudaSupport)
(lib.cmakeBool "ENABLE_CUSOLVER_BACKEND" cudaSupport)
(lib.cmakeBool "ENABLE_CUSPARSE_BACKEND" cudaSupport)
(lib.cmakeBool "ENABLE_ROCBLAS_BACKEND" enableHip)
(lib.cmakeBool "ENABLE_ROCFFT_BACKEND" enableHip)
(lib.cmakeBool "ENABLE_ROCSOLVER_BACKEND" enableHip)
(lib.cmakeBool "ENABLE_ROCRAND_BACKEND" enableHip)
(lib.cmakeBool "ENABLE_ROCSPARSE_BACKEND" enableHip)
(lib.cmakeBool "BUILD_FUNCTIONAL_TESTS" false)
(lib.cmakeBool "BUILD_EXAMPLES" false)
] ++ lib.optionals enableHip [
(lib.cmakeFeature "HIP_TARGETS" hipTargets)
];
nativeBuildInputs = [ cmake ];
buildInputs = lib.optionals (mklSupport) [
intelPackages.mkl
intelPackages.tbb
] ++ lib.optionals (enableHip) [
rocmPackages.rocmPath
rocmPackages.rocblas
rocmPackages.rocfft
rocmPackages.rocsolver
rocmPackages.rocrand
rocmPackages.rocsparse
] ++ lib.optionals (cudaSupport) [
(lib.getDev cudaPackages.cuda_cudart)
cudaPackages.cudatoolkit
cudaPackages.libcublas
cudaPackages.libcurand
cudaPackages.libcufft
cudaPackages.libcusparse
cudaPackages.libcusolver
];
}

View File

@@ -24,6 +24,7 @@ stdenv.mkDerivation rec {
doCheck = true;
enableParallelBuilding = true;
strictDeps = true;
nativeBuildInputs = [ mpiAll ];
buildInputs = [ mpiAll ];
hardeningDisable = [ "all" ];

View File

@@ -40,6 +40,7 @@ in
inherit (source) src version;
dontStrip = true;
separateDebugInfo = true;
strictDeps = true;
postPatch = ''
patchShebangs --build test/
'';

22
pkgs/papi/default.nix Normal file
View File

@@ -0,0 +1,22 @@
{
stdenv,
papi,
}:
if stdenv.hostPlatform == stdenv.buildPlatform then
papi
else
papi.overrideAttrs (old: {
configureFlags = (old.configureFlags or [ ]) ++ [
"--enable-perf_event_uncore=no"
"--with-sysdetect=no"
"--with-ffsll"
"--with-tls=__thread"
"--with-virtualtimer=clock_thread_cputime_id"
"--with-walltimer=clock_realtime"
"--with-perf-events"
"--with-CPU=${stdenv.hostPlatform.uname.processor}"
"--with-arch=${stdenv.hostPlatform.uname.processor}"
];
patches = (old.patches or [ ]) ++ [ ./fix-ar-cross.patch ];
})

View File

@@ -0,0 +1,19 @@
diff --git a/sde_lib/Makefile b/sde_lib/Makefile
index 8518f92..90a9953 100644
--- a/sde_lib/Makefile
+++ b/sde_lib/Makefile
@@ -1,4 +1,5 @@
CC ?= gcc
+AR ?= ar
SDE_INC = -I. -I..
SDE_LD = -ldl -pthread
CFLAGS += -Wextra -Wall -O2
@@ -18,7 +19,7 @@ dynamic: $(DOBJS)
rm -f *_d.o
static: $(SOBJS)
- ar rs libsde.a $(SOBJS)
+ $(AR) rs libsde.a $(SOBJS)
rm -f *_s.o
clean:

View File

@@ -47,6 +47,7 @@ stdenv.mkDerivation rec {
dontStrip = true;
enableParallelBuilding = true;
strictDeps = true;
preConfigure = ''
export CFLAGS="-O3"

View File

@@ -34,6 +34,7 @@ stdenv.mkDerivation rec {
enableParallelBuilding = true;
dontStrip = true;
strictDeps = true;
preConfigure = ''
export CFLAGS="-O3 -DPARALLEL_ENABLED"

View File

@@ -13,6 +13,7 @@ buildGoModule rec {
vendorHash = "sha256-A1dd9T9SIEHDCiVT2UwV6T02BSLh9ej6LC/2l54hgwI=";
doCheck = false;
strictDeps = true;
meta = with lib; {
description = "Prometheus SLURM Exporter";

View File

@@ -18,6 +18,7 @@ stdenv.mkDerivation rec {
};
hardeningDisable = [ "all" ];
dontStrip = true;
strictDeps = true;
configureFlags = [ "--with-ovni=${ovni}" ];
nativeBuildInputs = [

View File

@@ -17,6 +17,7 @@ stdenv.mkDerivation rec {
pname = "tagaspi";
enableParallelBuilding = true;
separateDebugInfo = true;
strictDeps = true;
version = "2.0";
src = fetchFromGitHub {

View File

@@ -45,6 +45,7 @@ in stdenv.mkDerivation {
inherit (source) src version;
enableParallelBuilding = true;
separateDebugInfo = true;
strictDeps = true;
nativeBuildInputs = [
autoconf

View File

@@ -1,87 +0,0 @@
{
lib,
stdenv,
autoconf,
automake,
autoreconfHook,
boost,
fetchFromGitHub,
gnumake,
libtool,
withCFlags,
useIntel ? true,
adaptivecpp ? null,
intelPackages ? null,
useGit ? false,
gitUrl ? "git@gitlab-internal.bsc.es:task-awareness/tasycl/tasycl.git",
gitBranch ? "main",
gitCommit ? "78f98dcf60a66e0eaa3b4ebcf55be076bec64825",
}:
assert !useIntel -> adaptivecpp != null;
assert useIntel -> intelPackages != null;
let
variant = if useIntel then "intel" else "acpp";
syclStdenv = withCFlags [ "-O3" ] (if useIntel then intelPackages.stdenv else stdenv);
release = rec {
version = "2.1.0";
src = fetchFromGitHub {
owner = "bsc-pm";
repo = "tasycl";
rev = version;
hash = "sha256-0kXnb0lHeQNHR27GTLbJ8xbiICLU8k2+FqEnnFSrzzo=";
};
};
git = rec {
version = src.shortRev;
src = builtins.fetchGit {
url = gitUrl;
ref = gitBranch;
rev = gitCommit;
};
};
source = if (useGit) then git else release;
in
syclStdenv.mkDerivation {
pname = "tasycl-${variant}";
inherit (source) src version;
enableParallelBuilding = true;
separateDebugInfo = true;
nativeBuildInputs = [
autoreconfHook
automake
autoconf
libtool
gnumake
];
buildInputs = [
boost
];
configureFlags = lib.optionals (!useIntel) [
"CXX=${lib.getExe adaptivecpp}"
];
# add symlinks so we can explicitly link with tasycl-intel / tasycl-acpp
postInstall = ''
pushd $out/lib
for i in libtasycl* ; do
ln -s "$i" "''\${i/tasycl/tasycl-${variant}}"
done
popd
'';
hardeningDisable = [ "all" ];
}

View File

@@ -9,6 +9,7 @@ python3Packages.buildPythonApplication {
src = ./.;
doCheck = false;
strictDeps = true;
build-system = with python3Packages; [
setuptools

View File

@@ -23,9 +23,6 @@ in stdenv.mkDerivation {
dontUnpack = true;
dontConfigure = true;
# nOS-V requires access to /sys/devices to request NUMA information
requiredSystemFeatures = [ "sys-devices" ];
buildInputs = [ openmp ];
buildPhase = ''

View File

@@ -1,55 +0,0 @@
{ intelPackages, writeText, strace }:
let
stdenv = intelPackages.stdenv;
hello_sycl = writeText "hello.cpp" ''
#include <sycl/sycl.hpp>
class hello_world;
int main(int argc, char** argv) try {
auto device_selector = sycl::default_selector_v;
sycl::queue queue(device_selector);
std::cout << "Running on: "
<< queue.get_device().get_info<sycl::info::device::name>()
<< std::endl;
queue.submit([&] (sycl::handler& cgh) {
auto os = sycl::stream{128, 128, cgh};
cgh.single_task<hello_world>([=]() {
os << "Hello World! (on device)\n";
});
});
return 0;
} catch (sycl::exception &e) {
std::cout << "SYCL exception: " << e.what() << std::endl;
return 0; // we excpect to fail since no devices should be available;
}
'';
in
stdenv.mkDerivation {
version = "0.0.1";
name = "hello-sycl";
buildInputs = [ stdenv strace ];
src = hello_sycl;
dontUnpack = true;
dontConfigure = true;
NIX_DEBUG = 0;
buildPhase = ''
cp $src hello.cpp
set -x
echo CXX=$CXX
command -v $CXX
$CXX -fsycl hello.cpp -o hello
./hello
set +x
'';
installPhase = ''
touch $out
'';
}

View File

@@ -1,74 +0,0 @@
{ writeText, intelPackages, nodes, nosv, clangOmpss2Nodes, strace }:
let
hello_cpp = writeText "hello.cpp" ''
#include <cstdio>
#include <sycl/sycl.hpp>
int main(int argc, char** argv) try {
sycl::queue queue;
std::cout << "Running on: "
<< queue.get_device().get_info<sycl::info::device::name>()
<< std::endl;
#pragma oss task
queue.submit([&] (sycl::handler& cgh) {
auto os = sycl::stream{128, 128, cgh};
cgh.single_task<class hello_world>([=]() {
os << "Hello World! (on device)\n";
});
}).wait();
return 0;
} catch (sycl::exception &e) {
std::cout << "SYCL exception: " << e.what() << std::endl;
return 0; // we expect to fail since no devices should be available;
}
'';
in
intelPackages.stdenv.mkDerivation {
version = "0.0.1";
name = "hello-syclompss";
src = hello_cpp;
nativeBuildInputs = [
strace
nodes
nosv
];
dontUnpack = true;
dontConfigure = true;
# NODES requires access to /sys/devices to request NUMA information
requiredSystemFeatures = [ "sys-devices" ];
env.NODES_HOME = nodes;
NIX_DEBUG = 1;
buildPhase = ''
cp $src hello.cpp
set -x
echo CXX=$CXX
echo NODES_HOME=$NODES_HOME
command -v $CXX
icpx -Wno-deprecated-declarations -fsycl \
-fsycl-host-compiler=${clangOmpss2Nodes.forIcpx}/bin/clang++ \
-fsycl-host-compiler-options='-Wno-deprecated-declarations -fompss-2=libnodes' \
-lnodes -lnosv \
$NODES_HOME/lib/nodes-main-wrapper.o \
hello.cpp -o hello
./hello
set +x
'';
installPhase = ''
touch $out
'';
}