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43 Commits

Author SHA1 Message Date
45ded6fb98 MEGA MERGE 2025-12-10 18:55:10 +01:00
de18ccf5c0 Add test to run sycl applications with PoCL 2025-12-10 18:55:10 +01:00
84ed5eb7ca Provide sycl-ls and sycl-trace on wrapped oneapi compiler 2025-12-10 18:44:53 +01:00
a7c4d39653 Use PoCL as SYCL runtime 2025-12-10 18:37:39 +01:00
16a8f84727 Refactor intel wrapper logic into single function 2025-12-10 17:36:06 +01:00
92d12c5f69 Properly find include path in patch intel wrapper 2025-12-10 17:26:19 +01:00
01d7133a5d Use nixSupport instead of extraBuildCommands 2025-12-10 17:09:04 +01:00
8f0f327683 Use packages.json for intel packages instead of awk script 2025-12-10 17:09:04 +01:00
97ffc95f8d Add passthru in ompss2 wrapper for icpx compat 2025-12-10 17:09:04 +01:00
3b4202f3f5 Remove wrapper flags when clang called from intel 2025-12-10 17:09:04 +01:00
f185b0c0b3 Add pertalde 2025-12-10 17:09:03 +01:00
cdc4e7f8fd Add oneMath 2025-12-10 17:09:03 +01:00
9436e3c604 Fix parsing of new apt package list for oneapi 2023
New apt list does not have Package: as the first entry for all packages
2025-12-10 17:09:03 +01:00
941a13357c Add TASYCL 2.1.0 2025-12-10 17:09:03 +01:00
d87c4ee985 Add test for icpx with ompss-2 as host compiler 2025-12-10 17:09:03 +01:00
f94e0b05c1 Add SYCL test compilation 2025-12-10 17:09:03 +01:00
b45eed9aef Add intelPackages_202{4,5} and make 2025 the default 2025-12-10 17:09:03 +01:00
2d5d0053f8 weasel: nix-serve bind to 0.0.0.0 2025-12-10 17:09:02 +01:00
30c7edafc0 Add aocc compiler 2025-12-10 17:09:02 +01:00
32acd179f9 weasel: add custom nix-serve
Proper override for haskell package

madness

Fix nix-serve-ng override
2025-12-10 17:09:02 +01:00
1e30d9f48c Add TACUDA package 2025-12-10 17:09:02 +01:00
421f0d44e4 Make hydra shut up 2025-12-10 17:09:02 +01:00
301eb6742d Add TAOpenCL 2025-12-10 17:09:02 +01:00
bb51aa52cb Add GROMACS 2025-12-10 17:09:02 +01:00
87be9325db Use POCL_CACHE_DIR instead of writableHome...Hook 2025-12-10 17:09:01 +01:00
c952e69f73 Add tests for PoCL with and without using icd 2025-12-10 17:09:01 +01:00
a0f2e2639b Add install check for OpenMP{,-V} 2025-12-10 15:56:37 +01:00
bda1f10dd7 Fix openmp buildInputs 2025-12-10 15:56:37 +01:00
734b3f0450 Remove unused sys-devices requirement in ld test 2025-12-10 15:56:36 +01:00
109ec07800 Enable papi when cross-compiling 2025-12-10 15:56:36 +01:00
881a08dd37 Fix papi cross compilation 2025-12-10 15:56:36 +01:00
fad79643fa Use pkg-config instead of papi_version_check 2025-12-10 15:56:36 +01:00
faa4b48538 Add github bscpm and gitlab-internal to allowed-uris 2025-12-10 15:56:35 +01:00
3e033836fc weasel: enable hydra tcp port in firewall 2025-12-10 15:56:35 +01:00
29c8c4826b hydra: set listen host 2025-12-10 15:56:35 +01:00
6765635462 Enable hydra on weasel 2025-12-10 15:56:35 +01:00
0a5b3403d4 Add nixfmt-tree to common packages 2025-12-10 15:56:35 +01:00
6dfa515b3b Add packages to user abonerib 2025-12-10 15:56:35 +01:00
6bef5ab4c6 Add nix-output-monitor to default packages 2025-12-10 15:56:34 +01:00
02d9f5a062 Use nicer prompt in bash when outside a nix shell 2025-12-10 15:56:34 +01:00
fcc9719ccd Enable fish shell and set it for abonerib 2025-12-10 15:56:34 +01:00
1e36c3b204 Fix cudainfo buildInputs 2025-12-10 15:56:33 +01:00
972518c2d8 Set strictDeps to true on all our packages 2025-12-10 15:56:33 +01:00
58 changed files with 1506 additions and 42968 deletions

View File

@@ -7,6 +7,7 @@
./base/august-shutdown.nix
./base/boot.nix
./base/env.nix
./base/fish.nix
./base/fs.nix
./base/hw.nix
./base/net.nix

View File

@@ -5,6 +5,8 @@
vim wget git htop tmux pciutils tcpdump ripgrep nix-index nixos-option
nix-diff ipmitool freeipmi ethtool lm_sensors cmake gnumake file tree
ncdu perf ldns pv
nix-output-monitor
nixfmt-tree
# From jungle overlay
osumb nixgen
];
@@ -28,9 +30,22 @@
VISUAL = "vim";
};
programs.bash.promptInit = ''
PS1="\h\\$ "
'';
programs.bash.promptInit = # bash
''
if echo "$PATH" | grep -qc '/nix/store'; then
# Inside a nix shell, dumb prompt
PS1="\h\\$ "
elif [ "$TERM" != "dumb" ] ; then
PROMPT_COLOR="1;31m"
((UID)) && PROMPT_COLOR="1;32m"
PS1="\n\[\033[$PROMPT_COLOR\][\[\e]0;\u@\h: \w\a\]\u@\h:\w]\\$\[\033[0m\] "
if test "$TERM" = "xterm"; then
PS1="\[\033]2;\h:\u:\w\007\]$PS1"
fi
fi
'';
time.timeZone = "Europe/Madrid";
i18n.defaultLocale = "en_DK.UTF-8";

3
m/common/base/fish.nix Normal file
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@@ -0,0 +1,3 @@
{
programs.fish.enable = true;
}

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@@ -87,6 +87,13 @@
openssh.authorizedKeys.keys = [
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIIIFiqXqt88VuUfyANkZyLJNiuroIITaGlOOTMhVDKjf abonerib@bsc"
];
shell = pkgs.fish;
packages = with pkgs; [
fzf
jujutsu
neovim
starship
];
};
vlopez = {

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@@ -1,9 +1,10 @@
{ lib, ... }:
{ lib, pkgs, ... }:
{
imports = [
../common/ssf.nix
../module/hut-substituter.nix
./hydra.nix
];
# Select this using the ID to avoid mismatches
@@ -30,4 +31,22 @@
prefixLength = 24;
} ];
};
services.nix-serve = {
enable = true;
bindAddress = "0.0.0.0";
port = 5000;
package = pkgs.haskell.lib.overrideSrc (pkgs.haskell.packages.ghc96.nix-serve-ng.override { nix = pkgs.nixVersions.nix_2_28; }) {
src = pkgs.fetchgit {
url = "https://jungle.bsc.es/git/abonerib/nix-serve-ng.git";
rev = "9c056641300a826db66b66d7e584b2541d38927a";
hash = "sha256-y69ZchFiZOU71eyeljcQgLxkLk5JUzZfanq8Yzw4MkI=";
};
version = "unstable";
};
secretKeyFile = "/var/cache-priv-key.pem";
# Public key:
# 10.0.40.6:8jBhIdXEBap+Qo+vc1/fnV9vj43A2oDk839EEheRr/U=
};
}

57
m/weasel/hydra.nix Normal file
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@@ -0,0 +1,57 @@
{
config,
pkgs,
lib,
...
}:
{
services.hydra = {
enable = true;
# Wrap hydra so it puts quiet flag every time... This is dumb and annoying,
# but i can't override the systemd ExecStart without running into infinite
# recursion.
package = pkgs.symlinkJoin {
name = "hydra-quiet";
paths = [ pkgs.hydra ];
postBuild = ''
for prog in hydra-queue-runner hydra-evaluator ; do
prev=$(realpath $out/bin/$prog)
rm $out/bin/$prog
cat >$out/bin/$prog <<EOF
#!/bin/sh
args=()
for arg in "\$@"; do
if [ "\$arg" != "-v" ]; then
args+=("\$arg")
fi
done
exec $prev --quiet "\''${args[@]}"
EOF
chmod +x $out/bin/$prog
done
'';
};
hydraURL = "http://localhost:3001"; # externally visible URL
notificationSender = "hydra@jungle.bsc.es"; # e-mail of Hydra service
port = 3001;
# a standalone Hydra will require you to unset the buildMachinesFiles list to avoid using a nonexistant /etc/nix/machines
buildMachinesFiles = [ ];
# you will probably also want, otherwise *everything* will be built from scratch
useSubstitutes = true;
listenHost = "0.0.0.0"; # Force IPv4
};
systemd.services.hydra-send-stats.enable = lib.mkForce false;
networking.firewall.allowedTCPPorts = [ config.services.hydra.port ];
nix.settings.extra-allowed-uris = [
"git+ssh://git@bscpm04.bsc.es"
"git+ssh://git@gitlab-internal.bsc.es"
"https://github.com"
"git+ssh://github.com"
];
}

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@@ -9,6 +9,9 @@ let
bscPkgs = {
agenix = prev.callPackage ./pkgs/agenix/default.nix { };
amd-uprof = prev.callPackage ./pkgs/amd-uprof/default.nix { };
aoccUnwrapped = callPackage ./pkgs/aocc/unwrapped.nix { };
aocc = callPackage ./pkgs/aocc/default.nix { };
stdenvAocc = final.overrideCC final.stdenv final.aocc;
bench6 = callPackage ./pkgs/bench6/default.nix { };
bigotes = callPackage ./pkgs/bigotes/default.nix { };
clangOmpss2 = callPackage ./pkgs/llvm-ompss2/default.nix { };
@@ -19,7 +22,11 @@ let
cudainfo = prev.callPackage ./pkgs/cudainfo/default.nix { };
#extrae = callPackage ./pkgs/extrae/default.nix { }; # Broken and outdated
gpi-2 = callPackage ./pkgs/gpi-2/default.nix { };
intel-apt = callPackage ./pkgs/intel-oneapi/packages.nix { };
intelPackages_2023 = callPackage ./pkgs/intel-oneapi/2023.nix { };
intelPackages_2024 = final.intel-apt.hpckit_2024;
intelPackages_2025 = final.intel-apt.hpckit_2025;
intelPackages = final.intelPackages_2025;
jemallocNanos6 = callPackage ./pkgs/nanos6/jemalloc.nix { };
# FIXME: Extend this to all linuxPackages variants. Open problem, see:
# https://discourse.nixos.org/t/whats-the-right-way-to-make-a-custom-kernel-module-available/4636
@@ -44,12 +51,15 @@ let
#nix-wrap = callPackage ./pkgs/nix-wrap/default.nix { };
nodes = callPackage ./pkgs/nodes/default.nix { };
nosv = callPackage ./pkgs/nosv/default.nix { };
oneMath = callPackage ./pkgs/onemath/default.nix { };
openmp = callPackage ./pkgs/llvm-ompss2/openmp.nix { monorepoSrc = final.clangOmpss2Unwrapped.src; version = final.clangOmpss2Unwrapped.version; };
openmpv = final.openmp.override { enableNosv = true; enableOvni = true; };
osumb = callPackage ./pkgs/osu/default.nix { };
ovni = callPackage ./pkgs/ovni/default.nix { };
ovniGit = final.ovni.override { useGit = true; };
papi = callPackage ./pkgs/papi/default.nix { papi = prev.papi; };
paraverKernel = callPackage ./pkgs/paraver/kernel.nix { };
pertalde = callPackage ./pkgs/pertalde/default.nix { };
pocl = callPackage ./pkgs/pocl/default.nix { };
pocl-noicd = callPackage ./pkgs/pocl/default.nix { enableICD = false; };
prometheus-slurm-exporter = prev.callPackage ./pkgs/slurm-exporter/default.nix { };
@@ -61,19 +71,16 @@ let
stdenvClangOmpss2Nanos6 = final.stdenv.override { cc = final.clangOmpss2Nanos6; allowedRequisites = null; };
stdenvClangOmpss2Nodes = final.stdenv.override { cc = final.clangOmpss2Nodes; allowedRequisites = null; };
stdenvClangOmpss2NodesOmpv = final.stdenv.override { cc = final.clangOmpss2NodesOmpv; allowedRequisites = null; };
tacuda = callPackage ./pkgs/tacuda/default.nix { };
tagaspi = callPackage ./pkgs/tagaspi/default.nix { };
tampi = callPackage ./pkgs/tampi/default.nix { };
tasycl = callPackage ./pkgs/tasycl/default.nix { };
tasycl-acpp = callPackage ./pkgs/tasycl/default.nix { useIntel = false; };
upc-qaire-exporter = prev.callPackage ./pkgs/upc-qaire-exporter/default.nix { };
taopencl = callPackage ./pkgs/taopencl/default.nix { };
wxparaver = callPackage ./pkgs/paraver/default.nix { };
gromacs = callPackage ./pkgs/gromacs/default.nix { enableSYCL = true; };
_cuda = prev._cuda.extend (_: _prev: final.lib.recursiveUpdate _prev {
extensions = _prev.extensions ++ [(finalAttrs: _: {
tacuda = finalAttrs.callPackage ./pkgs/tacuda/default.nix { };
})];
});
};
tests = rec {
@@ -81,6 +88,11 @@ let
#sigsegv = callPackage ./test/reproducers/sigsegv.nix { };
hello-c = callPackage ./test/compilers/hello-c.nix { };
hello-cpp = callPackage ./test/compilers/hello-cpp.nix { };
hello-sycl = callPackage ./test/compilers/hello-sycl.nix { };
hello-syclompss = callPackage ./test/compilers/icpx-ompss2.nix { };
hello-sycl-pocl = (callPackage ./test/compilers/hello-sycl.nix { }).withPocl;
hello-syclompss-pocl = (callPackage ./test/compilers/icpx-ompss2.nix { }).withPocl;
lto = callPackage ./test/compilers/lto.nix { };
asan = callPackage ./test/compilers/asan.nix { };
intel2023-icx-c = hello-c.override { stdenv = final.intelPackages_2023.stdenv; };
@@ -90,6 +102,13 @@ let
intel2023-ifort = callPackage ./test/compilers/hello-f.nix {
stdenv = final.intelPackages_2023.stdenv-ifort;
};
intel2024-icx-c = hello-c.override { stdenv = final.intelPackages_2024.stdenv; };
intel2025-icx-c = hello-c.override { stdenv = final.intelPackages_2025.stdenv; };
intel2024-icx-cpp = hello-cpp.override { stdenv = final.intelPackages_2024.stdenv; };
intel2025-icx-cpp = hello-cpp.override { stdenv = final.intelPackages_2025.stdenv; };
# intel2023-sycl = hello-sycl.override { intelPackages = final.intelPackages_2023; }; # broken
intel2024-sycl = hello-sycl.override { intelPackages = final.intelPackages_2024; };
intel2025-sycl = hello-sycl.override { intelPackages = final.intelPackages_2025; };
clangOmpss2-lto = lto.override { stdenv = final.stdenvClangOmpss2Nanos6; };
clangOmpss2-asan = asan.override { stdenv = final.stdenvClangOmpss2Nanos6; };
clangOmpss2-task = callPackage ./test/compilers/ompss2.nix {

View File

@@ -47,6 +47,7 @@ in
inherit version;
src = uprofSrc;
dontStrip = true;
strictDeps = true;
phases = [ "installPhase" "fixupPhase" ];
nativeBuildInputs = [ autoPatchelfHook radare2 ];
buildInputs = [

View File

@@ -18,6 +18,7 @@ in stdenv.mkDerivation {
set +x
'';
hardeningDisable = [ "pic" "format" ];
strictDeps = true;
nativeBuildInputs = kernel.moduleBuildDependencies;
patches = [ ./makefile.patch ./hrtimer.patch ./remove-wr-rdmsrq.patch ];
makeFlags = [

17
pkgs/aocc/default.nix Normal file
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@@ -0,0 +1,17 @@
{
wrapCCWith,
aoccUnwrapped,
}:
let
cc = aoccUnwrapped;
in
wrapCCWith {
inherit cc;
nixSupport.cc-cflags = [ "-isystem ${cc}/include" ];
extraBuildCommands = ''
wrap aocc $wrapper $ccPath/clang
wrap aocc++ $wrapper $ccPath/clang++
'';
}

52
pkgs/aocc/unwrapped.nix Normal file
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@@ -0,0 +1,52 @@
{
lib,
fetchurl,
stdenv,
autoPatchelfHook,
rocmPackages,
zlib,
libffi,
elfutils,
}:
let
# in newer nixpkgs the runtime is hsakmt
rocmRuntime = if rocmPackages ? hsakmt then rocmPackages.hsakmt else rocmPackages.rocm-runtime;
in
stdenv.mkDerivation {
pname = "aocc-compiler";
version = "5.0.0";
src = fetchurl {
url = "https://download.amd.com/developer/eula/aocc/aocc-5-0/aocc-compiler-5.0.0.tar";
sha256 = "sha256-lm+sLSx1np3m6WnBCtp6ezBsET9/HgfqN2gp7IY4Dao=";
};
nativeBuildInputs = [ autoPatchelfHook ];
buildInputs = [
elfutils
zlib
rocmRuntime
stdenv.cc.cc.lib
];
phases = [
"unpackPhase"
"installPhase"
"fixupPhase"
];
dontStrip = true;
installPhase = ''
mkdir -p $out
cp -a . $out/
ln -s ${lib.getLib libffi}/lib/libffi.so $out/lib/libffi.so.6
'';
passthru = {
inherit rocmRuntime;
isClang = true; # Needed for wrapCCWith
};
meta.mainProgram = "clang";
}

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@@ -59,6 +59,7 @@ stdenv.mkDerivation rec {
];
hardeningDisable = [ "all" ];
dontStrip = true;
strictDeps = true;
meta = {
homepage = "https://gitlab.pm.bsc.es/rarias/bench6";

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@@ -16,6 +16,8 @@ stdenv.mkDerivation {
};
nativeBuildInputs = [ cmake ];
strictDeps = true;
meta = {
homepage = "https://github.com/rodarima/bigotes";
description = "Versatile benchmark tool";

View File

@@ -10,11 +10,14 @@
stdenv.mkDerivation (finalAttrs: {
name = "cudainfo";
src = ./.;
buildInputs = [
strictDeps = true;
nativeBuildInputs = [
cudatoolkit # Required for nvcc
(lib.getOutput "static" cudaPackages.cuda_cudart) # Required for -lcudart_static
autoAddDriverRunpath
];
buildInputs = [
(lib.getOutput "static" cudaPackages.cuda_cudart) # Required for -lcudart_static
];
installPhase = ''
mkdir -p $out/bin
cp -a cudainfo $out/bin
@@ -23,6 +26,7 @@ stdenv.mkDerivation (finalAttrs: {
name = "cudainfo-test";
requiredSystemFeatures = [ "cuda" ];
dontBuild = true;
strictDeps = true;
nativeCheckInputs = [
finalAttrs.finalPackage # The cudainfo package from above
strace # When it fails, it will show the trace

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@@ -20,7 +20,7 @@
#, python3Packages
, installShellFiles
, symlinkJoin
, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
, enablePapi ? true
}:
let

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@@ -33,6 +33,7 @@ stdenv.mkDerivation rec {
};
enableParallelBuilding = true;
strictDeps = true;
patches = [ ./rdma-core.patch ./max-mem.patch ];

View File

@@ -40,45 +40,19 @@ let
mpi = "2021.9.0";
};
aptPackageIndex = stdenv.mkDerivation {
name = "intel-oneapi-packages";
srcs = [
# Run update.sh to update the package lists
./amd64-packages ./all-packages
];
phases = [ "installPhase" ];
installPhase = ''
awk -F': ' '\
BEGIN { print "[ {" } \
NR>1 && /^Package: / { print "} {"; } \
/: / { printf "%s = \"%s\";\n", $1, $2 } \
END { print "} ]" }' $srcs > $out
'';
};
aptPackages = import aptPackageIndex;
apthost = "https://apt.repos.intel.com/oneapi/";
getSum = pkgList: name:
findMatch = name:
let
matches = lib.filter (x: name == x.Package) pkgList;
#n = lib.length matches;
#match = builtins.trace (name + " -- ${builtins.toString n}") (lib.elemAt matches 0);
match = lib.elemAt matches 0;
in
match.SHA256;
getUrl = pkgList: name:
let
matches = lib.filter (x: name == x.Package) pkgList;
#match = assert lib.length matches == 1; lib.elemAt matches 0;
aptPackages = builtins.fromJSON (builtins.readFile ./packages.json);
matches = lib.filter (x: name == x.pname) aptPackages;
n = lib.length matches;
match =
#builtins.trace (name + " -- n=${builtins.toString n}")
(lib.elemAt matches 0);
match = builtins.traceVerbose (name + " -- ${builtins.toString n}") (builtins.head matches);
apthost = "https://apt.repos.intel.com/oneapi/";
in
apthost + match.Filename;
{
url = apthost + match.filename;
sha256 = match.sha256;
};
uncompressDebs = debs: name: stdenv.mkDerivation {
name = name;
@@ -98,10 +72,7 @@ let
joinDebs = name: names:
let
urls = builtins.map (x: getUrl aptPackages x) names;
sums = builtins.map (x: getSum aptPackages x) names;
getsrc = url: sha256: builtins.fetchurl { inherit url sha256; };
debs = lib.zipListsWith getsrc urls sums;
debs = builtins.map (x: builtins.fetchurl (findMatch x)) names;
in
uncompressDebs debs "${name}-source";
@@ -128,6 +99,7 @@ let
phases = [ "installPhase" "fixupPhase" ];
dontStrip = true;
strictDeps = true;
installPhase = ''
mkdir -p $out/{bin,etc,lib,include}
mkdir -p $out/share/man
@@ -179,6 +151,7 @@ let
];
phases = [ "installPhase" "fixupPhase" ];
dontStrip = true;
strictDeps = true;
autoPatchelfIgnoreMissingDeps = [ "libhwloc.so.5" ];
@@ -222,6 +195,7 @@ let
];
phases = [ "installPhase" "fixupPhase" ];
dontStrip = true;
strictDeps = true;
autoPatchelfIgnoreMissingDeps = [ "libsycl.so.6" ];
@@ -289,6 +263,7 @@ let
phases = [ "installPhase" "fixupPhase" ];
dontStrip = true;
strictDeps = true;
installPhase = ''
mkdir -p $out/{bin,lib,include}
@@ -377,6 +352,7 @@ let
phases = [ "installPhase" "fixupPhase" ];
dontStrip = true;
strictDeps = true;
installPhase = ''
mkdir -p $out/{bin,lib}
@@ -470,7 +446,7 @@ let
'';
};
ifort-wrapper = wrapIntel rec {
ifort-wrapper = wrapIntel {
cc = intel-compiler-fortran;
mygcc = gcc;
extraBuild = ''

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@@ -0,0 +1,297 @@
{
lib,
stdenv,
callPackage,
dpkg,
fetchurl,
sqlite,
elfutils,
}:
let
inherit (builtins)
attrNames
attrValues
concatMap
elem
filter
fromJSON
getAttr
groupBy
head
isNull
listToAttrs
map
mapAttrs
readFile
replaceStrings
splitVersion
;
inherit (lib)
converge
findFirst
groupBy'
hasPrefix
optional
pipe
take
toInt
toList
versionAtLeast
versionOlder
;
aptData = fromJSON (readFile ./packages.json);
# Compare versions in debian control file syntax
# See: https://www.debian.org/doc/debian-policy/ch-relationships.html#syntax-of-relationship-fields
#
# NOTE: this is not a proper version comparison
#
# A proper version solver, should aggregate dependencies with the same name
# and compute the constraint (e.g. a (>= 2) a (<< 5) -> 2 <= a << 5)
#
# But in the intel repo, there are no such "duplicated" dependencies to specify
# upper limits, which leads to issues when intel-hpckit-2021 depends on things
# like intel-basekit >= 2021.1.0-2403 and we end up installing the newest
# basekit instead of the one from 2021.
#
# To mitigate this, >= is set to take the latest version with matching major
# and minor (only revision and patch are allowed to change)
compareVersions =
got: kind: want:
let
g0 = take 2 (splitVersion got);
w0 = take 2 (splitVersion want);
in
if isNull want then
true
else if kind == "=" then
got == want
else if kind == "<<" then
versionOlder got want
else if kind == "<=" then
versionAtLeast want got
else if kind == ">>" then
versionOlder want got
else if kind == ">=" then
(g0 == w0) && versionAtLeast got want # always match major version
else
throw "unknown operation: ${kind}";
findMatching =
{
pname,
kind,
version,
}:
findFirst (x: pname == x.pname && compareVersions x.version kind version) null aptData;
isIntel = pkg: (hasPrefix "intel-" pkg.pname);
expandDeps =
pkg: (map findMatching (filter isIntel pkg.dependencies)) ++ (optional (pkg.size != 0) pkg);
# get the oldest by major version. If they have the same major version, take
# the newest. This prevents most issues with resolutions
# versionOlder b a -> true if b is older than a (b `older` a)
getNewerInMajor =
a: b:
let
va = a.version;
vb = b.version;
va0 = head (splitVersion va);
vb0 = head (splitVersion vb);
in
if isNull a then
b
else if va0 != vb0 then
if va0 > vb0 then b else a
else if versionOlder vb va then
a
else
b;
removeDups = l: attrValues (groupBy' getNewerInMajor null (getAttr "provides") l);
_resolveDeps = converge (l: removeDups (concatMap expandDeps l));
resolveDeps =
pkg:
let
deps = _resolveDeps (toList pkg);
namedDeps = (map (x: "${x.pname}-${x.version}") deps);
in
builtins.traceVerbose (builtins.deepSeq namedDeps namedDeps) deps;
blacklist = [
"intel-basekit-env"
"intel-basekit-getting-started"
"intel-hpckit-env"
"intel-hpckit-getting-started"
"intel-oneapi-advisor"
"intel-oneapi-common-licensing"
"intel-oneapi-common-oneapi-vars"
"intel-oneapi-common-vars"
"intel-oneapi-compiler-cpp-eclipse-cfg"
"intel-oneapi-compiler-dpcpp-eclipse-cfg"
"intel-oneapi-condaindex"
"intel-oneapi-dev-utilities-eclipse-cfg"
"intel-oneapi-dpcpp-ct-eclipse-cfg"
"intel-oneapi-eclipse-ide"
"intel-oneapi-hpc-toolkit-getting-started"
"intel-oneapi-icc-eclipse-plugin-cpp"
"intel-oneapi-vtune"
"intel-oneapi-vtune-eclipse-plugin-vtune"
];
isInBlacklist = pkg: elem pkg.provides blacklist;
removeBlacklist = filter (e: !(isInBlacklist e));
dpkgExtractAll =
pname: version:
{ srcs, deps }:
stdenv.mkDerivation {
inherit pname version srcs;
nativeBuildInputs = [ dpkg ];
phases = [ "installPhase" ];
passthru = { inherit deps; };
installPhase = ''
mkdir -p $out
for src in $srcs; do
echo "Unpacking $src"
dpkg -x $src $out
done
'';
};
apthost = "https://apt.repos.intel.com/oneapi/";
fetchDeb =
p:
fetchurl {
url = apthost + p.filename;
inherit (p) sha256;
};
buildIntel =
pkg:
pipe pkg [
resolveDeps
removeBlacklist
(l: {
srcs = map fetchDeb l;
deps = l;
})
(dpkgExtractAll "${pkg.provides}-extracted" pkg.version)
];
findHpcKit =
year:
findMatching {
pname = "intel-hpckit";
kind = "<<";
version = toString (year + 1);
};
years = map toInt (attrNames components);
patchIntel = callPackage ./patch_intel.nix { };
# Version information for each hpckit. This is used to normalize the paths
# so that files are in $out/{bin,lib,include...} instead of all over the place
# in $out/opt/intel/oneapi/*/*/{...}.
#
# The most important is the compiler component, which is used to build the
# stdenv for the hpckit.
#
# NOTE: this have to be manually specified, so we can avoid IFD. To add a
# new version, add a new field with an empty attrset, (e.g. "2026" = {}; ),
# build hpckit_2026.unpatched and use the values from
# result/opt/intel/oneapi/* to populate the attrset.
#
# WARN: if there are more than one version in the folders of the unpatched
# components, our dependency resolution hacks have probably failed and the
# package set may be broken.
components = {
"2025" = {
ishmem = "1.4";
pti = "0.13";
tcm = "1.4";
umf = "0.11";
ccl = "2021.16";
compiler = "2025.2";
dal = "2025.8";
debugger = "2025.2";
dev-utilities = "2025.2";
dnnl = "2025.2";
dpcpp-ct = "2025.2";
dpl = "2022.9";
ipp = "2022.2";
ippcp = "2025.2";
mkl = "2025.2";
mpi = "2021.16";
tbb = "2022.2";
};
"2024" = {
tcm = "1.1";
ccl = "2021.13";
compiler = "2024.2";
dal = "2024.6";
debugger = "2024.2";
dev-utilities = "2024.2";
diagnostics = "2024.2";
dnnl = "2024.2";
dpcpp-ct = "2024.2";
dpl = "2022.6";
ipp = "2021.12";
ippcp = "2021.12";
mkl = "2024.2";
mpi = "2021.13";
tbb = "2021.13";
extraPackages = [
sqlite
elfutils
];
};
};
replaceDots = replaceStrings [ "." ] [ "_" ];
in
lib.recurseIntoAttrs (
listToAttrs (
map (
year:
let
year_str = toString year;
in
{
name = "hpckit_${year_str}";
value = patchIntel {
unpatched = buildIntel (findHpcKit year);
components = components.${year_str};
};
}
) years
)
)
// {
apt = pipe aptData [
(groupBy (p: replaceDots p.provides))
(mapAttrs (
_: l:
listToAttrs (
map (pkg: {
name = replaceDots ("v" + pkg.version);
value = pkg;
}) l
)
))
];
inherit resolveDeps patchIntel buildIntel;
}

View File

@@ -0,0 +1,192 @@
{
stdenv,
stdenvNoCC,
lib,
symlinkJoin,
autoPatchelfHook,
wrapCCWith,
overrideCC,
gcc,
hwloc,
libelf,
libffi_3_3,
libpsm2,
libuuid,
libxml2,
numactl,
ocl-icd,
openssl,
python3,
rdma-core,
ucx,
zlib,
}:
lib.makeOverridable (
{
unpatched,
components ? { },
extraPackages ? components.extraPackages or [ ],
}:
let
inherit (builtins)
attrValues
filter
mapAttrs
removeAttrs
;
__components = removeAttrs components [ "extraPackages" ];
_components = __components;
# _components = lib.traceSeqN 2 {
# inherit unpatched __components;
# deps = builtins.map (x: "${x.pname}-${x.version}") unpatched.deps;
# } __components;
wrapIntel =
cc:
let
targetConfig = stdenv.targetPlatform.config;
in
(wrapCCWith {
inherit cc;
nixSupport = {
cc-ldflags = [
"-L${gcc.cc}/lib/gcc/${targetConfig}/${gcc.version}"
"-L${gcc.cc.lib}/lib"
"-L${cc}/lib"
];
cc-cflags = [
"--gcc-toolchain=${gcc.cc}"
"-isystem \"${cc.original}/lib/clang/*/include\""
"-isystem ${cc}/include"
"-isystem ${cc}/include/intel64"
"-isystem ${gcc.cc}/lib/gcc/${targetConfig}/${gcc.version}/include"
];
libcxx-cxxflags = [
# "--gcc-toolchain=${gcc.cc}"
"-isystem ${gcc.cc}/include/c++/${gcc.version}"
"-isystem ${gcc.cc}/include/c++/${gcc.version}/${targetConfig}"
];
};
extraBuildCommands = ''
# FIXME: We should find a better way to modify the PATH instead of using
# this ugly hack. See https://jungle.bsc.es/git/rarias/bscpkgs/issues/9
echo 'path_backup="${gcc.cc}/bin:$path_backup"' >>$out/nix-support/cc-wrapper-hook
# Disable hardening by default
echo "" > $out/nix-support/add-hardening.sh
wrap icx $wrapper $ccPath/icx
wrap icpx $wrapper $ccPath/icpx
wrap ifx $wrapper $ccPath/ifx
ln -s $out/bin/icpx $out/bin/c++
ln -s $out/bin/icx $out/bin/cc
ln -s $ccPath/sycl-ls $out/bin/sycl-ls
ln -s $ccPath/sycl-trace $out/bin/sycl-trace
sed -i 's/.*isCxx=0/isCxx=1/' $out/bin/icpx
# Use this to detect when a compiler subprocess is called
# from icpx (--fsycl-host-compiler)
echo 'export NIX_CC_WRAPPER_INTEL=1' >>$out/nix-support/cc-wrapper-hook
# oneMath looks for sycl libraries in bin/../lib
ln -s ${cc}/lib $out/lib
ln -s ${cc}/include $out/include
'';
}).overrideAttrs
(old: {
installPhase = old.installPhase + ''
export named_cc="icx"
export named_cxx="icpx"
export named_fc="ifx"
'';
});
in
stdenvNoCC.mkDerivation (finalAttrs: {
pname = lib.removeSuffix "-extracted" unpatched.pname;
inherit (unpatched) version;
src = unpatched;
phases = [
"installPhase"
"fixupPhase"
];
buildInputs = [
libffi_3_3
libelf
libxml2
hwloc
numactl
libuuid
libpsm2
zlib
ocl-icd
rdma-core
ucx
openssl
python3
stdenv.cc.cc.lib
]
++ extraPackages;
autoPatchelfIgnoreMissingDeps = [
"libhwloc.so.5"
"libcuda.so.1"
"libze_loader.so.1"
];
# There are broken symlinks that go outside packages, ignore them
dontCheckForBrokenSymlinks = true;
nativeBuildInputs = [ autoPatchelfHook ];
installPhase = ''
cp -r $src/opt/intel/oneapi/ $out
'';
passthru =
let
pkgs = mapAttrs (
folder: version:
let
original = "${finalAttrs.finalPackage}/${folder}/${version}";
in
(symlinkJoin {
pname = "intel-${folder}";
inherit version;
paths = [ original ];
}).overrideAttrs
{ passthru = { inherit original; }; }
) _components;
in
pkgs
// {
inherit unpatched;
pkgs = lib.recurseIntoAttrs pkgs;
components = _components;
# This contains all packages properly symlinked into toplevel directories
# in $out.
#
# NOTE: there are clashes with packages that have symlinks outside their
# scope (libtcm and env/vars.sh)
all = symlinkJoin {
pname = finalAttrs.finalPackage + "-symlinked";
inherit (finalAttrs.finalPackage) version;
paths = filter lib.isDerivation (attrValues finalAttrs.finalPackage.pkgs);
};
stdenv = overrideCC stdenv finalAttrs.finalPackage.cc;
cc = wrapIntel finalAttrs.finalPackage.pkgs.compiler;
};
})
)

29
pkgs/intel-oneapi/process.jq Executable file
View File

@@ -0,0 +1,29 @@
#!/usr/bin/env -S jq -f
def extract_fields: {
pname : .Package,
version : .Version,
provides : .Package | sub("[0-9.-]*$"; ""),
filename : .Filename,
size : ."Installed-Size" | tonumber,
sha256 : .SHA256,
dependencies : .Depends,
} ;
# parses dependencies into a list of [{.pname, .kind, .version}]
# some dependencies do not have a version specified, in which case, kind = version = null
#
# example dependencies:
# intel-oneapi-common-vars (>= 2023.0.0-25325), intel-oneapi-common-licensing-2023.0.0
def split_dependencies : map(try(.dependencies |= split(",\\s?"; "")) // .dependencies |= []) ;
def match_version : capture("(?<pname>[a-zA-Z0-9_\\-.]*) *(\\((?<kind>[<>=]*) *(?<version>.*)\\))?"; "") ;
def parse_dependencies : map_values(.dependencies.[] |= match_version) ;
def sort_version_decreasing : sort_by(.version | split("[-.]"; "") | map(tonumber)) | reverse ;
map(extract_fields) | split_dependencies | parse_dependencies | sort_version_decreasing
# [.[] | select(.pname == "intel-hpckit") | .version]

29
pkgs/intel-oneapi/toJson.awk Executable file
View File

@@ -0,0 +1,29 @@
#!/usr/bin/env -S awk -f
BEGIN {
FS=": "
prev_empty=1
t=" "
print "[ {"
}
!NF { # empty line, update separator so next non empty line closes the dict
prev_empty=1
t="},\n{ "
next # skip line (we won't match anything else)
}
{
printf t "\"%s\" : \"%s\"\n", $1, $2
if (prev_empty) {
# we were the first after a group of empty lines, following ones have to
# have a comma
prev_empty=0
t=", "
}
}
END { print "} ]" }

View File

@@ -1,4 +1,11 @@
#!/bin/sh
curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-amd64/Packages -o amd64-packages
curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-all/Packages -o all-packages
out_64=$(mktemp intel-api.64.XXXXXX)
out_all=$(mktemp intel-api.all.XXXXXX)
trap 'rm -f "$out_64" "$out_all"' EXIT INT HUP
curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-amd64/Packages -o "$out_64"
curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-all/Packages -o "$out_all"
# NOTE: we use `jq -r tostring` to minify the json (3.2Mb -> 2.3Mb)
cat "$out_64" "$out_all" | ./toJson.awk | ./process.jq | jq -r tostring >packages.json

View File

@@ -48,6 +48,7 @@ in stdenv.mkDerivation {
inherit (source) src version;
enableParallelBuilding = true;
strictDeps = true;
passthru = {
CC = "clang";

View File

@@ -3,6 +3,7 @@
, lib
, gcc
, clangOmpss2Unwrapped
, writeShellScript
, openmp ? null
, wrapCCWith
, llvmPackages_latest
@@ -37,10 +38,7 @@ let
inherit gcc;
cc = clangOmpss2Unwrapped;
gccVersion = with versions; let v = gcc.version; in concatStringsSep "." [(major v) (minor v) (patch v)];
in wrapCCWith {
inherit cc bintools;
# extraPackages adds packages to depsTargetTargetPropagated
extraPackages = optional (openmp != null) openmp;
extraBuildCommands = ''
echo "-target ${targetConfig}" >> $out/nix-support/cc-cflags
echo "-B${gcc.cc}/lib/gcc/${targetConfig}/${gccVersion}" >> $out/nix-support/cc-cflags
@@ -57,14 +55,50 @@ in wrapCCWith {
echo "--gcc-toolchain=${gcc}" >> $out/nix-support/cc-cflags
wrap clang++ $wrapper $ccPath/clang++
'' + optionalString (openmp != null) ''
echo "export OPENMP_RUNTIME=${ompname}" >> $out/nix-support/cc-wrapper-hook
'' + optionalString (ompss2rt != null) ''
echo "export OMPSS2_RUNTIME=${rtname}" >> $out/nix-support/cc-wrapper-hook
echo "export ${homevar}=${ompss2rt}" >> $out/nix-support/cc-wrapper-hook
'' + optionalString (ompss2rt != null && ompss2rt.pname == "nodes") ''
echo "export NOSV_HOME=${ompss2rt.nosv}" >> $out/nix-support/cc-wrapper-hook
'';
}
envExports = lib.optionalString (openmp != null) ''
echo "export OPENMP_RUNTIME=${ompname}" >> $out/nix-support/cc-wrapper-hook
'' + optionalString (ompss2rt != null) ''
echo "export OMPSS2_RUNTIME=${rtname}" >> $out/nix-support/cc-wrapper-hook
echo "export ${homevar}=${ompss2rt}" >> $out/nix-support/cc-wrapper-hook
'' + optionalString (ompss2rt != null && ompss2rt.pname == "nodes") ''
echo "export NOSV_HOME=${ompss2rt.nosv}" >> $out/nix-support/cc-wrapper-hook
'';
extraPackages = optional (openmp != null) openmp;
wrappedCC = wrapCCWith {
# extraPackages adds packages to depsTargetTargetPropagated
inherit cc bintools extraPackages;
extraBuildCommands = extraBuildCommands + envExports;
};
resetIntelCCFlags = let tconf = builtins.replaceStrings ["-"] ["_"] targetConfig;
in writeShellScript "remove-intel.sh" ''
if [ "''${NIX_CC_WRAPPER_INTEL:-0}" = 1 ]; then
unset NIX_CFLAGS_COMPILE_${tconf}
unset NIX_CC_WRAPPER_FLAGS_SET_${tconf}
if (( "''${NIX_DEBUG:-0}" >= 1 )); then
echo "ompss2: cleaned NIX_CFLAGS_COMPILE_${tconf} (invokation from intel compiler detected)"
fi
fi
'';
intelExtraBuildCommands = ''
sed -i 's|# Flirting.*|source ${resetIntelCCFlags}\n\n&|' $out/bin/clang
sed -i 's|# Flirting.*|source ${resetIntelCCFlags}\n\n&|' $out/bin/clang++
'';
wrappedCCIntel = wrapCCWith {
inherit cc bintools extraPackages;
# extraPackages adds packages to depsTargetTargetPropagated
extraBuildCommands = intelExtraBuildCommands + envExports;
};
in wrappedCC.overrideAttrs (oldAttrs: {
passthru = oldAttrs.passthru // {
forIcpx = wrappedCCIntel;
};
})

View File

@@ -39,7 +39,9 @@ stdenv.mkDerivation rec {
perl
pkg-config
python3
] ++ lib.optionals enableNosv [
];
buildInputs = lib.optionals enableNosv [
nosv
] ++ lib.optionals enableOvni [
ovni
@@ -54,6 +56,7 @@ stdenv.mkDerivation rec {
dontStrip = enableDebug;
separateDebugInfo = true;
strictDeps = true;
cmakeFlags = [
"-DLIBOMP_OMPD_SUPPORT=OFF"
@@ -71,6 +74,28 @@ stdenv.mkDerivation rec {
rm -f $out/libllvmrt/libomp.*
'';
doInstallCheck = true;
# There are not cmake flags to force nOS-V, it enables it when found through
# pkg-config. If enableNosv is set, but we fail to find it at build time,
# the build will succeed but won't use nOS-V (libompv won't be created).
# This is a sanity check to ensure that after install we have the proper
# files.
installCheckPhase =
if enableNosv then
''
test -f $out/lib/libompv.so
test -f $out/libllvmrt/libompv.so
test ! -f $out/lib/libomp.so
test ! -f $out/libllvmrt/libomp.so
''
else
''
test -f $out/lib/libomp.so
test -f $out/libllvmrt/libomp.so
test ! -f $out/lib/libompv.so
test ! -f $out/libllvmrt/libompv.so
'';
passthru = {
inherit nosv;
};

View File

@@ -27,6 +27,7 @@ stdenv.mkDerivation rec {
hardeningDisable = [ "all" ];
enableParallelBuilding = false;
strictDeps = true;
preBuild = ''
makeFlagsArray+=(

View File

@@ -9,6 +9,7 @@ python3Packages.buildPythonApplication {
src = ./.;
doCheck = false;
strictDeps = true;
build-system = with python3Packages; [
setuptools

View File

@@ -53,6 +53,7 @@ in mpich.overrideAttrs (old: {
'';
hardeningDisable = [ "all" ];
strictDeps = true;
meta = old.meta // {
maintainers = old.meta.maintainers ++ (with lib.maintainers.bsc; [ rarias ]);

View File

@@ -0,0 +1,67 @@
diff --git a/m4/papi.m4 b/m4/papi.m4
--- a/m4/papi.m4
+++ b/m4/papi.m4
@@ -24,12 +24,13 @@ AC_DEFUN([AC_CHECK_PAPI],
else
PKG_CHECK_MODULES(
[papi],
- [papi],
+ [papi >= 5.6.0],
[
AC_MSG_CHECKING([the PAPI installation prefix])
AC_MSG_RESULT([retrieved from pkg-config])
papi_CPPFLAGS="${papi_CFLAGS}"
ac_use_papi=yes
+ ac_papi_version_correct=yes
], [
AC_MSG_CHECKING([the PAPI installation prefix])
AC_MSG_RESULT([not available])
@@ -67,27 +68,29 @@ AC_DEFUN([AC_CHECK_PAPI],
fi
if test x"${ac_use_papi}" = x"yes" ; then
- if test x"${ac_cv_use_papi_prefix}" != x"" ; then
- papiBinary=${ac_cv_use_papi_prefix}/bin/papi_version
- else
- papiBinary=papi_version
- fi
- papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
+ if test x"${ac_papi_version_correct}" != x"yes" ; then
+ if test x"${ac_cv_use_papi_prefix}" != x"" ; then
+ papiBinary=${ac_cv_use_papi_prefix}/bin/papi_version
+ else
+ papiBinary=papi_version
+ fi
+ papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
- AX_COMPARE_VERSION(
- [[${papiVersion}]],
- [[ge]],
- [[5.6.0]],
- [[ac_papi_version_correct=yes]],
- [[ac_papi_version_correct=no]]
- )
+ AX_COMPARE_VERSION(
+ [[${papiVersion}]],
+ [[ge]],
+ [[5.6.0]],
+ [[ac_papi_version_correct=yes]],
+ [[ac_papi_version_correct=no]]
+ )
- if test x"${ac_papi_version_correct}" != x"yes" ; then
- AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
- ac_use_papi=no
- else
- AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
- AC_MSG_RESULT([${ac_papi_version_correct}])
+ if test x"${ac_papi_version_correct}" != x"yes" ; then
+ AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
+ ac_use_papi=no
+ else
+ AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
+ AC_MSG_RESULT([${ac_papi_version_correct}])
+ fi
fi
fi

View File

@@ -16,7 +16,7 @@
, jemallocNanos6 ? null
, cachelineBytes ? 64
, enableGlibcxxDebug ? false
, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
, enablePapi ? true
, useGit ? false
, gitUrl ? "ssh://git@bscpm04.bsc.es/nanos6/nanos6"
, gitBranch ? "master"
@@ -95,16 +95,15 @@ in
dontStrip = enableDebug;
separateDebugInfo = true;
strictDeps = true;
patches = [ ./check-papi-version-with-pkgconfig.patch ];
nativeBuildInputs = [
autoconf
automake
libtool
pkg-config
# TODO: papi_version is needed for configure:
# ./configure: line 27378: papi_version: command not found
# This probably breaks cross-compilation
] ++ lib.optionals enablePapi [ papi ];
];
buildInputs = [
boost

View File

@@ -8,6 +8,7 @@ stdenv.mkDerivation {
version = "0.0.1";
src = ./nixgen;
dontUnpack = true;
strictDeps = true;
phases = [ "installPhase" ];
installPhase = ''
mkdir -p $out/bin

View File

@@ -16,6 +16,7 @@ stdenv.mkDerivation rec {
makeFlags = [ "DESTDIR=$(out)" ];
preBuild = "env";
dontPatchShebangs = true;
strictDeps = true;
meta = {
homepage = "https://gitlab.pm.bsc.es/rarias/nixtools";

View File

@@ -48,6 +48,7 @@ in
enableParallelBuilding = true;
dontStrip = true;
separateDebugInfo = true;
strictDeps = true;
configureFlags = [
"--with-nosv=${nosv}"

View File

@@ -0,0 +1,68 @@
diff --git a/m4/papi.m4 b/m4/papi.m4
index de905848..fa3db9a1 100644
--- a/m4/papi.m4
+++ b/m4/papi.m4
@@ -24,12 +24,13 @@ AC_DEFUN([AC_CHECK_PAPI],
else
PKG_CHECK_MODULES(
[papi],
- [papi],
+ [papi >= 5.6.0],
[
AC_MSG_CHECKING([the PAPI installation prefix])
AC_MSG_RESULT([retrieved from pkg-config])
papi_CFLAGS="${papi_CFLAGS}"
ac_use_papi=yes
+ ac_papi_version_correct=yes
], [
AC_MSG_CHECKING([the PAPI installation prefix])
AC_MSG_RESULT([not available])
@@ -67,27 +68,29 @@ AC_DEFUN([AC_CHECK_PAPI],
fi
if test x"${ac_use_papi}" = x"yes" ; then
- if test x"${ac_cv_use_papi_prefix}" != x"" ; then
- papiBinary=${ac_cv_use_papi_prefix}/bin/papi_version
- else
- papiBinary=papi_version
- fi
- papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
+ if test x"${ac_papi_version_correct}" != x"yes" ; then
+ if test x"${ac_cv_use_papi_prefix}" != x"" ; then
+ papiBinary=${ac_cv_use_papi_prefix}/bin/papi_version
+ else
+ papiBinary=papi_version
+ fi
+ papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
- AX_COMPARE_VERSION(
- [[${papiVersion}]],
- [[ge]],
- [[5.6.0]],
- [[ac_papi_version_correct=yes]],
- [[ac_papi_version_correct=no]]
- )
+ AX_COMPARE_VERSION(
+ [[${papiVersion}]],
+ [[ge]],
+ [[5.6.0]],
+ [[ac_papi_version_correct=yes]],
+ [[ac_papi_version_correct=no]]
+ )
- if test x"${ac_papi_version_correct}" != x"yes" ; then
- AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
- ac_use_papi=no
- else
- AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
- AC_MSG_RESULT([${ac_papi_version_correct}])
+ if test x"${ac_papi_version_correct}" != x"yes" ; then
+ AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
+ ac_use_papi=no
+ else
+ AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
+ AC_MSG_RESULT([${ac_papi_version_correct}])
+ fi
fi
fi

View File

@@ -7,7 +7,7 @@
, numactl
, hwloc
, papi
, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
, enablePapi ? true
, cacheline ? 64 # bits
, ovni ? null
, useGit ? false
@@ -40,12 +40,14 @@ let
source = if (useGit) then git else release;
in
stdenv.mkDerivation rec {
stdenv.mkDerivation {
pname = "nosv";
inherit (source) src version;
hardeningDisable = [ "all" ];
dontStrip = true;
separateDebugInfo = true;
strictDeps = true;
patches = [ ./check-papi-version-with-pkgconfig.patch ];
configureFlags = [
"--with-ovni=${ovni}"
"CACHELINE_WIDTH=${toString cacheline}"

91
pkgs/onemath/default.nix Normal file
View File

@@ -0,0 +1,91 @@
{
lib,
fetchFromGitHub,
cmake,
withCFlags,
intelPackages,
mklSupport ? true,
config,
cudaSupport ? config.cudaSupport,
cudaPackages ? { },
rocmSupport ? config.rocmSupport,
hipTargets ? null, # only one target at a time supported
rocmPackages ? { },
}:
let
# rocmSupport is not enough, we need a specific target
enableHip = rocmSupport && hipTargets != null;
stdenv = withCFlags (lib.optionals cudaSupport [
"--cuda-path=${cudaPackages.cudatoolkit}"
]) intelPackages.stdenv;
in
# at least one backend has to be enabled
assert mklSupport || cudaSupport || enableHip;
stdenv.mkDerivation rec {
pname = "oneMath";
version = "0.8";
src = fetchFromGitHub {
owner = "uxlfoundation";
repo = "oneMath";
rev = "v${version}";
sha256 = "sha256-xK8lKI3oqKlx3xtvdScpMq+HXAuoYCP0BZdkEqnJP5o=";
};
cmakeFlags = [
(lib.cmakeBool "ENABLE_MKLCPU_BACKEND" mklSupport)
(lib.cmakeBool "ENABLE_MKLGPU_BACKEND" mklSupport)
(lib.cmakeBool "ENABLE_CUBLAS_BACKEND" cudaSupport)
(lib.cmakeBool "ENABLE_CUFFT_BACKEND" cudaSupport)
(lib.cmakeBool "ENABLE_CURAND_BACKEND" cudaSupport)
(lib.cmakeBool "ENABLE_CUSOLVER_BACKEND" cudaSupport)
(lib.cmakeBool "ENABLE_CUSPARSE_BACKEND" cudaSupport)
(lib.cmakeBool "ENABLE_ROCBLAS_BACKEND" enableHip)
(lib.cmakeBool "ENABLE_ROCFFT_BACKEND" enableHip)
(lib.cmakeBool "ENABLE_ROCSOLVER_BACKEND" enableHip)
(lib.cmakeBool "ENABLE_ROCRAND_BACKEND" enableHip)
(lib.cmakeBool "ENABLE_ROCSPARSE_BACKEND" enableHip)
(lib.cmakeBool "BUILD_FUNCTIONAL_TESTS" false)
(lib.cmakeBool "BUILD_EXAMPLES" false)
]
++ lib.optionals enableHip [
(lib.cmakeFeature "HIP_TARGETS" hipTargets)
];
nativeBuildInputs = [ cmake ];
buildInputs =
lib.optionals (mklSupport) [
intelPackages.mkl
intelPackages.tbb
]
++ lib.optionals (enableHip) [
rocmPackages.rocmPath
rocmPackages.rocblas
rocmPackages.rocfft
rocmPackages.rocsolver
rocmPackages.rocrand
rocmPackages.rocsparse
]
++ lib.optionals (cudaSupport) [
(lib.getDev cudaPackages.cuda_cudart)
cudaPackages.cudatoolkit
cudaPackages.libcublas
cudaPackages.libcurand
cudaPackages.libcufft
cudaPackages.libcusparse
cudaPackages.libcusolver
];
}

View File

@@ -24,6 +24,7 @@ stdenv.mkDerivation rec {
doCheck = true;
enableParallelBuilding = true;
strictDeps = true;
nativeBuildInputs = [ mpiAll ];
buildInputs = [ mpiAll ];
hardeningDisable = [ "all" ];

View File

@@ -40,6 +40,7 @@ in
inherit (source) src version;
dontStrip = true;
separateDebugInfo = true;
strictDeps = true;
postPatch = ''
patchShebangs --build test/
'';

22
pkgs/papi/default.nix Normal file
View File

@@ -0,0 +1,22 @@
{
stdenv,
papi,
}:
if stdenv.hostPlatform == stdenv.buildPlatform then
papi
else
papi.overrideAttrs (old: {
configureFlags = (old.configureFlags or [ ]) ++ [
"--enable-perf_event_uncore=no"
"--with-sysdetect=no"
"--with-ffsll"
"--with-tls=__thread"
"--with-virtualtimer=clock_thread_cputime_id"
"--with-walltimer=clock_realtime"
"--with-perf-events"
"--with-CPU=${stdenv.hostPlatform.uname.processor}"
"--with-arch=${stdenv.hostPlatform.uname.processor}"
];
patches = (old.patches or [ ]) ++ [ ./fix-ar-cross.patch ];
})

View File

@@ -0,0 +1,19 @@
diff --git a/sde_lib/Makefile b/sde_lib/Makefile
index 8518f92..90a9953 100644
--- a/sde_lib/Makefile
+++ b/sde_lib/Makefile
@@ -1,4 +1,5 @@
CC ?= gcc
+AR ?= ar
SDE_INC = -I. -I..
SDE_LD = -ldl -pthread
CFLAGS += -Wextra -Wall -O2
@@ -18,7 +19,7 @@ dynamic: $(DOBJS)
rm -f *_d.o
static: $(SOBJS)
- ar rs libsde.a $(SOBJS)
+ $(AR) rs libsde.a $(SOBJS)
rm -f *_s.o
clean:

View File

@@ -47,6 +47,7 @@ stdenv.mkDerivation rec {
dontStrip = true;
enableParallelBuilding = true;
strictDeps = true;
preConfigure = ''
export CFLAGS="-O3"

View File

@@ -34,6 +34,7 @@ stdenv.mkDerivation rec {
enableParallelBuilding = true;
dontStrip = true;
strictDeps = true;
preConfigure = ''
export CFLAGS="-O3 -DPARALLEL_ENABLED"

47
pkgs/pertalde/default.nix Normal file
View File

@@ -0,0 +1,47 @@
{
lib,
python3,
fetchPypi,
cargo,
rustPlatform,
rustc,
}:
let
pname = "pertalde";
version = "0.1.4";
src = fetchPypi {
inherit pname version;
hash = "sha256-KdS5yNYR+8z81hMBTl9oNiLi17cVLyoZBNNR88T/gOY=";
};
in
python3.pkgs.buildPythonApplication {
inherit pname version src;
pyproject = true;
strictDeps = true;
cargoDeps = rustPlatform.fetchCargoVendor {
inherit src;
name = "${pname}-${version}";
hash = "sha256-dQ8EKlYZq+Urtb+0zxRi/Vh/ormIGCNKHy/9entyb7g=";
};
# error[E0554]: `#![feature]` may not be used on the stable release channel
env.RUSTC_BOOTSTRAP = true;
build-system = [
cargo
rustPlatform.cargoSetupHook
rustPlatform.maturinBuildHook
rustc
];
meta = {
description = "Some command-line utilities on paraver traces";
homepage = "https://pypi.org/project/pertalde/";
license = lib.licenses.gpl3Only;
maintainers = with lib.maintainers.bsc; [ abonerib ];
mainProgram = "ptd";
};
}

View File

@@ -14,8 +14,6 @@
python3,
writableTmpDirAsHomeHook,
writeText,
runCommand,
opencl-cts,
fetchFromGitHub,
@@ -203,38 +201,12 @@ stdenv.mkDerivation (finalAttrs: {
''
);
passthru =
let
self = finalAttrs.finalPackage;
in
{
updateScript = nix-update-script { };
git = self.override { useGit = true; };
withICD = enableICD;
test = {
# Run builtin tests (causes a rebuild)
self = self.overrideAttrs { doCheck = true; };
# Run basic test from Khronos OpenCL Conformance Test Suite
# WARN: despite its name, test_basic is very exhaustive, and can take more
# than 1 hour in a marenostrum5 node.
cts =
assert enableICD;
lib.genAttrs [ "api" "basic" "c11_atomics" "printf" "svm" ] (
name:
runCommand "pocl-cts-test_${name}" {
nativeBuildInputs = [ self ];
requiredSystemFeatures = [ "sys-devices" ];
env = {
POCL_DEBUG = "error,warn";
POCL_CACHE_DIR = "/build/pocl_cache";
};
} "${opencl-cts}/bin/Release/test_${name} | tee $out"
);
};
};
passthru = {
updateScript = nix-update-script { };
git = finalAttrs.finalPackage.override { useGit = true; };
test = finalAttrs.finalPackage.overrideAttrs { doCheck = true; };
withICD = enableICD;
};
env.HWLOC_SYNTHETIC = lib.optionalDrvAttr enableHWLOC "node:1 core:1 pu:1";

View File

@@ -13,6 +13,7 @@ buildGoModule rec {
vendorHash = "sha256-A1dd9T9SIEHDCiVT2UwV6T02BSLh9ej6LC/2l54hgwI=";
doCheck = false;
strictDeps = true;
meta = with lib; {
description = "Prometheus SLURM Exporter";

View File

@@ -18,6 +18,7 @@ stdenv.mkDerivation rec {
};
hardeningDisable = [ "all" ];
dontStrip = true;
strictDeps = true;
configureFlags = [ "--with-ovni=${ovni}" ];
nativeBuildInputs = [

View File

@@ -1,5 +1,5 @@
{
backendStdenv,
stdenv,
fetchFromGitHub,
automake,
autoconf,
@@ -7,9 +7,7 @@
gnumake,
autoreconfHook,
boost,
cudatoolkit,
libcublas,
cuda_cudart,
cudaPackages,
useGit ? false,
gitUrl ? "git@gitlab-internal.bsc.es:task-awareness/tacuda/tacuda.git",
@@ -43,13 +41,12 @@ let
in
backendStdenv.mkDerivation {
stdenv.mkDerivation {
pname = "tacuda";
inherit (source) src version;
enableParallelBuilding = true;
separateDebugInfo = true;
strictDeps = true;
nativeBuildInputs = [
autoreconfHook
@@ -61,12 +58,12 @@ backendStdenv.mkDerivation {
patches = [ ./fix_config.patch ];
configureFlags = [ "--with-cuda-include=${cudatoolkit}/include" ];
configureFlags = [ "--with-cuda-include=${cudaPackages.cudatoolkit}/include" ];
buildInputs = [
boost
libcublas
cuda_cudart
cudaPackages.libcublas
cudaPackages.cuda_cudart
];
}

View File

@@ -17,6 +17,7 @@ stdenv.mkDerivation rec {
pname = "tagaspi";
enableParallelBuilding = true;
separateDebugInfo = true;
strictDeps = true;
version = "2.0";
src = fetchFromGitHub {

View File

@@ -45,6 +45,7 @@ in stdenv.mkDerivation {
inherit (source) src version;
enableParallelBuilding = true;
separateDebugInfo = true;
strictDeps = true;
nativeBuildInputs = [
autoconf

87
pkgs/tasycl/default.nix Normal file
View File

@@ -0,0 +1,87 @@
{
lib,
stdenv,
autoconf,
automake,
autoreconfHook,
boost,
fetchFromGitHub,
gnumake,
libtool,
withCFlags,
useIntel ? true,
adaptivecpp ? null,
intelPackages ? null,
useGit ? false,
gitUrl ? "git@gitlab-internal.bsc.es:task-awareness/tasycl/tasycl.git",
gitBranch ? "main",
gitCommit ? "78f98dcf60a66e0eaa3b4ebcf55be076bec64825",
}:
assert !useIntel -> adaptivecpp != null;
assert useIntel -> intelPackages != null;
let
variant = if useIntel then "intel" else "acpp";
syclStdenv = withCFlags [ "-O3" ] (if useIntel then intelPackages.stdenv else stdenv);
release = rec {
version = "2.1.0";
src = fetchFromGitHub {
owner = "bsc-pm";
repo = "tasycl";
rev = version;
hash = "sha256-0kXnb0lHeQNHR27GTLbJ8xbiICLU8k2+FqEnnFSrzzo=";
};
};
git = rec {
version = src.shortRev;
src = builtins.fetchGit {
url = gitUrl;
ref = gitBranch;
rev = gitCommit;
};
};
source = if (useGit) then git else release;
in
syclStdenv.mkDerivation {
pname = "tasycl-${variant}";
inherit (source) src version;
enableParallelBuilding = true;
separateDebugInfo = true;
nativeBuildInputs = [
autoreconfHook
automake
autoconf
libtool
gnumake
];
buildInputs = [
boost
];
configureFlags = lib.optionals (!useIntel) [
"CXX=${lib.getExe adaptivecpp}"
];
# add symlinks so we can explicitly link with tasycl-intel / tasycl-acpp
postInstall = ''
pushd $out/lib
for i in libtasycl* ; do
ln -s "$i" "''\${i/tasycl/tasycl-${variant}}"
done
popd
'';
hardeningDisable = [ "all" ];
}

View File

@@ -9,6 +9,7 @@ python3Packages.buildPythonApplication {
src = ./.;
doCheck = false;
strictDeps = true;
build-system = with python3Packages; [
setuptools

View File

@@ -23,9 +23,6 @@ in stdenv.mkDerivation {
dontUnpack = true;
dontConfigure = true;
# nOS-V requires access to /sys/devices to request NUMA information
requiredSystemFeatures = [ "sys-devices" ];
buildInputs = [ openmp ];
buildPhase = ''

View File

@@ -0,0 +1,79 @@
{
intelPackages,
writeText,
strace,
pocl,
}:
let
stdenv = intelPackages.stdenv;
hello_sycl = writeText "hello.cpp" ''
#include <sycl/sycl.hpp>
class hello_world;
int main(int argc, char** argv) try {
auto device_selector = sycl::default_selector_v;
sycl::queue queue(device_selector);
std::cout << "Running on: "
<< queue.get_device().get_info<sycl::info::device::name>()
<< std::endl;
queue.submit([&] (sycl::handler& cgh) {
auto os = sycl::stream{128, 128, cgh};
cgh.single_task<hello_world>([=]() {
os << "Hello World! (on device)\n";
});
});
return 0;
} catch (sycl::exception &e) {
std::cout << "SYCL exception: " << e.what() << std::endl;
return 0; // we excpect to fail since no devices should be available;
}
'';
in
stdenv.mkDerivation (finalAttrs: {
version = "0.0.1";
name = "hello-sycl";
nativeBuildInputs = [
stdenv
strace
];
src = hello_sycl;
dontUnpack = true;
dontConfigure = true;
NIX_DEBUG = 0;
buildPhase = ''
cp $src hello.cpp
set -x
echo CXX=$CXX
command -v $CXX
$CXX -fsycl hello.cpp -o hello
./hello | tee test-output
set +x
'';
installPhase = ''
cp test-output $out
'';
passthru.withPocl = finalAttrs.finalPackage.overrideAttrs (old: {
nativeBuildInputs = old.nativeBuildInputs ++ [ pocl ];
env = (old.env or { }) // {
POCL_DEBUG = "error,warn";
POCL_CACHE_DIR = "/build/pocl_cache";
# Make PoCL report Intel vendor id so oneapi SYCL works
POCL_DRIVER_VERSION_OVERRIDE = "2024.18.6.0.02_160000";
POCL_CPU_VENDOR_ID_OVERRIDE = 32902;
};
doInstallCheck = true;
installCheckPhase = ''
grep "Hello World! (on device)" $out
'';
});
})

View File

@@ -0,0 +1,98 @@
{
writeText,
intelPackages,
nodes,
nosv,
clangOmpss2Nodes,
strace,
pocl,
}:
let
hello_cpp = writeText "hello.cpp" ''
#include <cstdio>
#include <sycl/sycl.hpp>
int main(int argc, char** argv) try {
sycl::queue queue;
std::cout << "Running on: "
<< queue.get_device().get_info<sycl::info::device::name>()
<< std::endl;
#pragma oss task
queue.submit([&] (sycl::handler& cgh) {
auto os = sycl::stream{128, 128, cgh};
cgh.single_task<class hello_world>([=]() {
os << "Hello World! (on device)\n";
});
}).wait();
return 0;
} catch (sycl::exception &e) {
std::cout << "SYCL exception: " << e.what() << std::endl;
return 0; // we expect to fail since no devices should be available;
}
'';
in
intelPackages.stdenv.mkDerivation (finalAttrs: {
version = "0.0.1";
name = "hello-syclompss";
src = hello_cpp;
nativeBuildInputs = [
strace
nodes
nosv
];
passthru.withPocl = finalAttrs.finalPackage.overrideAttrs (old: {
nativeBuildInputs = old.nativeBuildInputs ++ [ pocl ];
env = (old.env or { }) // {
POCL_DEBUG = "error,warn";
POCL_CACHE_DIR = "/build/pocl_cache";
# Make PoCL report Intel vendor id so oneapi SYCL works
POCL_DRIVER_VERSION_OVERRIDE = "2024.18.6.0.02_160000";
POCL_CPU_VENDOR_ID_OVERRIDE = 32902;
};
doInstallCheck = true;
installCheckPhase = ''
grep "Hello World! (on device)" $out
'';
});
dontUnpack = true;
dontConfigure = true;
# NODES requires access to /sys/devices to request NUMA information
requiredSystemFeatures = [ "sys-devices" ];
env.NODES_HOME = nodes;
NIX_DEBUG = 1;
buildPhase = ''
cp $src hello.cpp
set -x
echo CXX=$CXX
echo NODES_HOME=$NODES_HOME
command -v $CXX
icpx -Wno-deprecated-declarations -fsycl \
-fsycl-host-compiler=${clangOmpss2Nodes.forIcpx}/bin/clang++ \
-fsycl-host-compiler-options='-Wno-deprecated-declarations -fompss-2=libnodes' \
-lnodes -lnosv \
$NODES_HOME/lib/nodes-main-wrapper.o \
hello.cpp -o hello
./hello | tee test-output
set +x
'';
installPhase = ''
cp test-output $out
'';
})

View File

@@ -0,0 +1,31 @@
{
stdenv,
clang-ompss2,
nanos6,
}:
stdenv.mkDerivation {
version = "0.0.1";
name = "test-clang-ompss2";
src = ./.;
buildInputs = [
clang-ompss2
nanos6
];
env = {
# NIX_DEBUG = 1;
OCL_ICD_VENDORS = "";
};
buildPhase = ''
clang -fompss-2 hello.c -o hello
./hello
clang++ -fompss-2 hello.cc -o hello
./hello
'';
installPhase = ''
mkdir -p $out
'';
}