85ba591ea7
gromacs: fixes
2025-10-28 17:02:25 +01:00
2f7af3445e
Add gromacs
2025-10-28 17:02:25 +01:00
a6009b1dff
Update versions to 2025.2
2025-10-28 17:02:25 +01:00
a6e095a354
Minify packages.json
2025-10-28 17:02:25 +01:00
27b458c4b7
Use packages.json for intel packages instead of awk script
2025-10-28 17:02:24 +01:00
24f8c723cd
Use gcc13 for llvm-ompss2 for intel
2025-10-28 17:02:24 +01:00
565bf12883
Use gcc13 for intel compiler
2025-10-28 17:02:24 +01:00
af97f80332
Add passthru in ompss2 wrapper for icpx compat
2025-10-28 17:02:24 +01:00
0c3cb8c612
Remove wrapper flags when clang called from intel
2025-10-28 17:02:24 +01:00
fe7278162a
Add oneMath
2025-10-28 17:02:24 +01:00
335cb28628
Fix parsing of new apt package list for oneapi 2023
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New apt list does not have Package: as the first entry for all packages
2025-10-28 17:02:24 +01:00
8425ee1ab1
Add TASYCL 2.1.0
2025-10-28 17:02:23 +01:00
6f721d3ec2
Add test for icpx with ompss-2 as host compiler
2025-10-28 17:02:23 +01:00
f17c434161
Add SYCL test compilation
2025-10-28 17:02:23 +01:00
f390b99557
Add intelPackages_202{4,5} and make 2025 the default
2025-10-28 17:02:23 +01:00
019826d09e
Add OmpSs-2 release timers and services
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Send a reminder email to the STAR group to mark the release cycle dates.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-28 12:38:37 +01:00
a294daf7e3
Use specific mail-robot group to send mail
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Allows any user to be able to send mail from the robot account as long
as it is added to the mail-robot group.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-28 12:38:17 +01:00
a7018250ca
Add missing slurm package to overlay
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-28 11:44:40 +01:00
e3d1785285
Run a shell in the allocated node with salloc
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By default, salloc will open a new shell in the *current* node instead
of in the allocated node. This often causes users to leave the extra
shell running once the allocation ends. Repeating this process several
times causes chains of shells.
By running the shell in the remote node, once the allocation ends the
shell finishes as well.
Fixes: rarias/jungle#174
See: https://slurm.schedmd.com/faq.html#prompt
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-28 11:44:14 +01:00
ab86243a07
Add missing which in nodes checkPhase
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When enabling checks, the build log is polluted with errors.
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Aleix Boné <abonerib@bsc.es>
2025-10-23 15:59:21 +02:00
14f2393d30
Update website
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Add apex page and replace bscpkgs references for jungle after the merge.
See: rarias/jungle-website#1
Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-22 15:48:13 +02:00
f115d611e7
Add aaguirre user
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-22 15:28:29 +02:00
4261d327c6
Include agenix module and package directly
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Avoids adding an extra flake input only to fetch a single module and
package.
Reviewed-by: Aleix Boné <abonerib@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-14 09:37:47 +02:00
4685c36e2f
Add brief documentation on maintainer roles
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-10 16:37:00 +02:00
c6c788f1e2
Add meta to packages
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-10 16:36:56 +02:00
606386d006
Add maintainers
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-10 16:36:38 +02:00
1fba0a14a8
Enable ovni for cross compilation
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-10 12:08:28 +02:00
d6621e939a
Add RISC-V cross-compilation target for CI
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-10 12:08:24 +02:00
67726c1d44
Fix nanos6 cross-compilation for riscv
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-09 15:49:01 +02:00
a971ed6a54
Fix cross compilation for lmbench
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-09 15:49:01 +02:00
06581e455c
Disable papi when cross compiling
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Even if we do an override to papi get the proper configure flags for
cross-compiling, the memory fences are not defined for risc-v:
mb.h:67:2: error: #error Need to define rmb for this architecture!
See: rarias/jungle#184
Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-09 15:48:45 +02:00
dd7f24f455
Replace __noChroot with requiredSystemFeatures
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-09 11:41:18 +02:00
64e2c39582
Add hwloc test with sys-devices feature
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-09 11:41:06 +02:00
98d17b19d3
Enable custom sys-devices system feature
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-09 11:40:44 +02:00
44cc60fcd8
Update license year range to 2025
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:32 +02:00
ca48ce556c
Update gitlab CI after merge
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:30 +02:00
e8ac9dfb64
Upgrade README after bscpkgs merge
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:28 +02:00
188ba6df0a
Remove bscpkgs input
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:26 +02:00
b1a37ae1fe
Enable unfree packages in nixpkgs config
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:24 +02:00
63822bb054
Move the rest of packages to main overlay
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:23 +02:00
b94a1493d5
Merge flake.nix with bscpkgs
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:21 +02:00
826d6a28ef
Move slurm to pkgs/
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:19 +02:00
ae6b0ae161
Move MPICH to pkgs/mpich and set as default
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-07 16:07:01 +02:00
01986c376b
Merge remote-tracking branch 'bscpkgs/master' into merge-bscpkgs
2025-10-03 13:47:04 +02:00
e42058f08b
Allow access to hut from fox
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-02 17:03:21 +02:00
f3bfe89f27
Fetch website from its own git repository
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-02 15:45:21 +02:00
ee6f981006
Add script to trim the repository
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Reviewed-by: Aleix Boné <abonerib@bsc.es>
2025-10-02 15:44:56 +02:00
92ee4a09d7
Rename test to tests and tests to testList
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
Tested-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:53:09 +02:00
34f4b6aa37
Move bsc-ci test into let
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:33 +02:00
2f2d6cbea8
Rework bsc-ci
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Reviewed-by: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
2025-10-01 15:45:31 +02:00
