Prepare nix build for nanos6 rt tests

nix/0001-Emit-a-fill-event-at-shutdown.patch

@@ -0,0 +1,29 @@
+From abeed615777690ba748f64bdb72a35fe5311259b Mon Sep 17 00:00:00 2001
+From: Rodrigo Arias <rodrigo.arias@bsc.es>
+Date: Thu, 25 Aug 2022 16:36:38 +0200
+Subject: [PATCH] Emit a fill event at shutdown
+
+---
+ src/instrument/ovni/InstrumentThreadManagement.cpp | 6 ++++++
+ 1 file changed, 6 insertions(+)
+
+diff --git a/src/instrument/ovni/InstrumentThreadManagement.cpp b/src/instrument/ovni/InstrumentThreadManagement.cpp
+index c79a9750..4872b2d9 100644
+--- a/src/instrument/ovni/InstrumentThreadManagement.cpp
++++ b/src/instrument/ovni/InstrumentThreadManagement.cpp
+@@ -92,6 +92,12 @@ void Instrument::threadHasResumed(__attribute__((unused)) external_thread_id_t t
+ 
+ void Instrument::threadWillShutdown()
+ {
++	ThreadLocalData &tld = getThreadLocalData();
++	if (tld._hungry) {
++		tld._hungry = false;
++		Ovni::schedFill();
++	}
++
+ 	Ovni::threadEnd();
+ }
+ 
+-- 
+2.36.1
+

nix/nanos6.nix

@@ -0,0 +1,93 @@
+let
+  pkgs = import (builtins.fetchTarball
+    "https://pm.bsc.es/gitlab/rarias/bscpkgs/-/archive/master/bscpkgs-master.tar.gz");
+
+  rWrapper = pkgs.rWrapper.override {
+    packages = with pkgs.rPackages; [ tidyverse rjson jsonlite egg viridis ];
+  };
+
+  # Recursively set MPI
+  bsc = pkgs.bsc.extend (last: prev: {
+    mpi = last.impi;
+    #mpi = last.openmpi;
+
+    nanos6 = (prev.nanos6Git.override {
+      gitUrl = "ssh://git@bscpm03.bsc.es/nanos6/forks/nanos6-extern-001.git";
+      gitBranch = "ovni_instr";
+      extrae = null;
+    }).overrideAttrs (old: {
+      buildInputs = old.buildInputs ++ [ last.ovni ];
+      patches = [ ./0001-Emit-a-fill-event-at-shutdown.patch ];
+      configureFlags = old.configureFlags ++ [
+        "--with-ovni=${last.ovni}"
+      ];
+    });
+
+    # Quick hack, as we only need the libovni runtime to match ours
+    nanos6' = /nix/store/zg989jl3mgdps7amdskna43hipb6snsq-nanos6-60fc5f2;
+
+    ompss2 = {
+      clangUnwrapped = prev.clangOmpss2Unwrapped.overrideAttrs (
+        old:
+        rec {
+          src = ../kk/llvm-mono-d3d4f2bf231b9461a5881c5bf56659516d45e670.tar.bz2;
+          #src = fetchTarball {
+          #  url = ../kk/llvm-mono-d3d4f2bf231b9461a5881c5bf56659516d45e670.tar.bz2;
+          #};
+          #builtins.fetchTree {
+          #  type = "git";
+          #  url = "ssh://git@bscpm03.bsc.es/llvm-ompss/llvm-mono.git";
+          #  ref = "master";
+          #  # Master at 2022-07-26
+          #  rev = "d3d4f2bf231b9461a5881c5bf56659516d45e670";
+          #  shallow = true;
+          #};
+          version = "d3d4f2bf";
+        }
+      );
+
+      #clangUnwrapped = /nix/store/fg621rqj50x85gnsbh1pj304049yqlaq-clang-ompss2-d3d4f2b;
+
+      clang = prev.clangOmpss2.override {
+        clangOmpss2Unwrapped = last.ompss2.clangUnwrapped;
+      };
+
+      #clang = /nix/store/qva7b665inxgg8wrfl2jf9dwzdp69sxq-clang-ompss2-wrapper-d3d4f2b;
+
+      stdenv = pkgs.overrideCC pkgs.llvmPackages_11.stdenv bsc.ompss2.clang;
+    };
+
+    nosv = pkgs.stdenv.mkDerivation rec {
+      pname = "nosv";
+      version = src.shortRev;
+      buildInputs = with pkgs; [ autoreconfHook pkg-config numactl last.ovni ];
+      configureFlags = [ "--with-ovni=${last.ovni}" ];
+      dontStrip = true;
+      src = builtins.fetchGit {
+        url = "ssh://git@gitlab-internal.bsc.es/nos-v/nos-v.git";
+        ref = "master";
+      };
+    };
+
+    # Quick fix to avoid rebuilding every time the ovni source changes.
+    # Use this nosv' version below as dependency of ovni-rt
+    nosv' = /nix/store/rvnrbc7ibpw06jdilz6mha7szzxcr2mi-nosv-8936f3e;
+
+    ovni = last.callPackage ./ovni.nix { };
+
+    ovni-rt = (last.ovni.override {
+      stdenv = last.ompss2.stdenv;
+    }).overrideAttrs (old: {
+      __impure = true;
+      __noChroot = true;
+      buildInputs = old.buildInputs ++ [
+        last.nosv'
+        pkgs.strace
+      ];
+      cmakeFlags = old.cmakeFlags ++ [ "-DBUILD_RT_TESTING=ON" ];
+    });
+  });
+
+in
+  bsc.ovni-rt
+  #bsc.ompss2.clang

nix/ovni.nix

@@ -0,0 +1,32 @@
+{
+  stdenv
+, cmake
+, openmpi
+}:
+
+stdenv.mkDerivation rec {
+  name = "ovni";
+
+  buildInputs = [ cmake openmpi ];
+
+  # Prevent accidental reutilization of previous builds, as we are taking the
+  # current directory as-is
+  preConfigure = ''
+    rm -rf build install
+
+    # There is no /bin/bash
+    patchShebangs test/*.sh
+  '';
+
+  cmakeBuildType = "Debug";
+  cmakeFlags = [ "-DCMAKE_SKIP_BUILD_RPATH=OFF" ];
+  buildFlags = [ "VERBOSE=1" ];
+  preCheck = ''
+    export CTEST_OUTPUT_ON_FAILURE=1
+  '';
+  dontStrip = true;
+  doCheck = true;
+  checkTarget = "test";
+
+  src = ../.;
+}