The previous iniput size for both granularity and strong scaling tests where too big to meet the timing constrains needed for garlic. This patch sets a new, smaller, input size. Also, a minor cleanup is applied to the rest of the fwi experiments and figures.
		
			
				
	
	
		
			121 lines
		
	
	
		
			3.3 KiB
		
	
	
	
		
			R
		
	
	
	
	
	
			
		
		
	
	
			121 lines
		
	
	
		
			3.3 KiB
		
	
	
	
		
			R
		
	
	
	
	
	
| library(ggplot2)
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| library(dplyr)
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| library(scales)
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| library(jsonlite)
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| 
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| args=commandArgs(trailingOnly=TRUE)
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| 
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| # Read the timetable from args[1]
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| input_file = "input.json"
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| if (length(args)>0) { input_file = args[1] }
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| 
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| # Load the dataset in NDJSON format
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| dataset = jsonlite::stream_in(file(input_file)) %>%
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|   jsonlite::flatten()
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| 
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| # Select block size to display
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| useBlocksize = 2
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| 
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| # We only need the nblocks and time
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| df = select(dataset, config.blocksize, config.gitBranch, config.nodes, time) %>%
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|   rename(
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|      blocksize=config.blocksize,
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|      gitBranch=config.gitBranch,
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|      nodes=config.nodes
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|   ) %>%
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|   filter(blocksize == useBlocksize | blocksize == 0) %>%
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|   group_by(nodes, gitBranch) %>%
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|   mutate(mtime = median(time)) %>%
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|   mutate(nxmtime = mtime * nodes) %>%
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|   mutate(nxtime = time * nodes) %>%
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|   ungroup()
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| 
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| df$gitBranch = as.factor(df$gitBranch)
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| df$blocksize = as.factor(df$blocksize)
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| df$nodes     = as.factor(df$nodes)
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| 
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| ppi=300
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| h=5
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| w=5
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| 
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| ####################################################################
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| ### Line plot (time)
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| ####################################################################
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| png("time.png", width=w*ppi, height=h*ppi, res=ppi)
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| 
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| p = ggplot(df, aes(x=nodes, y=time, group=gitBranch, color=gitBranch)) +
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|   geom_point() +
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|   geom_line() +
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|   theme_bw() +
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|   labs(x="Nodes", y="Time (s)", title="FWI strong scaling",
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|     subtitle=input_file) +
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|   theme(plot.subtitle=element_text(size=8)) +
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|   theme(legend.position = c(0.6, 0.75))
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| 
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| # Render the plot
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| print(p)
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| 
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| # Save the png image
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| dev.off()
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| 
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| ####################################################################
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| ### Line plot (time x nodes)
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| ####################################################################
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| png("nxtime.png", width=w*ppi, height=h*ppi, res=ppi)
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| 
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| p = ggplot(df, aes(x=nodes, y=nxtime, group=gitBranch, color=gitBranch)) +
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|   geom_point() +
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|   geom_line() +
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|   theme_bw() +
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|   labs(x="Nodes", y="Time * Nodes (s)", title="FWI strong scaling",
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|     subtitle=input_file) +
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|   theme(plot.subtitle=element_text(size=8)) +
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|   theme(legend.position = c(0.15, 0.80)) +
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|   theme(legend.text = element_text(size = 7))
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| 
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| # Render the plot
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| print(p)
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| 
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| # Save the png image
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| dev.off()
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| 
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| ####################################################################
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| ### Line plot (median time)
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| ####################################################################
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| png("mediantime.png", width=w*ppi, height=h*ppi, res=ppi)
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| 
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| p = ggplot(df, aes(x=nodes, y=mtime, group=gitBranch, color=gitBranch)) +
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|   geom_point() +
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|   geom_line() +
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|   theme_bw() +
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|   labs(x="Nodes", y="Median Time (s)", title="FWI strong scaling",
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|     subtitle=input_file) +
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|   theme(plot.subtitle=element_text(size=8)) +
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|   theme(legend.position = c(0.5, 0.88))
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| 
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| # Render the plot
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| print(p)
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| 
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| # Save the png image
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| dev.off()
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| 
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| ####################################################################
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| ### Line plot (nodes x median time)
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| ####################################################################
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| png("nxmtime.png", width=w*ppi, height=h*ppi, res=ppi)
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| 
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| p = ggplot(df, aes(x=nodes, y=nxmtime, group=gitBranch, color=gitBranch)) +
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|   geom_point() +
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|   geom_line() +
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|   theme_bw() +
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|   labs(x="Nodes", y="Median Time * Nodes (s)", title="FWI strong scaling",
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|     subtitle=input_file) +
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|   theme(plot.subtitle=element_text(size=8)) +
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|   theme(legend.position = c(0.5, 0.88))
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| 
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| # Render the plot
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| print(p)
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| 
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| # Save the png image
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| dev.off()
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