SQ Fix mpich

flake.nix

@@ -19,7 +19,6 @@ let
   pkgs = import nixpkgs {
     inherit system;
     overlays = [ self.overlays.default ];
-    config.allowUnfree = true;
   };
 in
   {

overlay.nix

@@ -7,7 +7,6 @@ let
   callPackage = final.callPackage;
 
   bscPkgs = {
-    amd-uprof = prev.callPackage ./pkgs/amd-uprof/default.nix { };
     bench6 = callPackage ./pkgs/bench6/default.nix { };
     bigotes = callPackage ./pkgs/bigotes/default.nix { };
     clangOmpss2 = callPackage ./pkgs/llvm-ompss2/default.nix { };
@@ -15,22 +14,12 @@ let
     clangOmpss2Nodes = callPackage ./pkgs/llvm-ompss2/default.nix { ompss2rt = final.nodes; openmp = final.openmp; };
     clangOmpss2NodesOmpv = callPackage ./pkgs/llvm-ompss2/default.nix { ompss2rt = final.nodes; openmp = final.openmpv; };
     clangOmpss2Unwrapped = callPackage ./pkgs/llvm-ompss2/clang.nix { };
-    cudainfo = prev.callPackage ./pkgs/cudainfo/default.nix { };
     #extrae = callPackage ./pkgs/extrae/default.nix { }; # Broken and outdated
     gpi-2 = callPackage ./pkgs/gpi-2/default.nix { };
     intelPackages_2023 = callPackage ./pkgs/intel-oneapi/2023.nix { };
     jemallocNanos6 = callPackage ./pkgs/nanos6/jemalloc.nix { };
-    # FIXME: Extend this to all linuxPackages variants. Open problem, see:
-    # https://discourse.nixos.org/t/whats-the-right-way-to-make-a-custom-kernel-module-available/4636
-    linuxPackages = prev.linuxPackages.extend (_final: _prev: {
-      amd-uprof-driver = _prev.callPackage ./pkgs/amd-uprof/driver.nix { };
-    });
-    linuxPackages_latest = prev.linuxPackages_latest.extend(_final: _prev: {
-      amd-uprof-driver = _prev.callPackage ./pkgs/amd-uprof/driver.nix { };
-    });
     lmbench = callPackage ./pkgs/lmbench/default.nix { };
     mcxx = callPackage ./pkgs/mcxx/default.nix { };
-    meteocat-exporter = prev.callPackage ./pkgs/meteocat-exporter/default.nix { };
     mpi = final.mpich; # Set MPICH as default
     mpich = callPackage ./pkgs/mpich/default.nix { mpich = prev.mpich; };
     nanos6 = callPackage ./pkgs/nanos6/default.nix { };
@@ -47,7 +36,6 @@ let
     ovni = callPackage ./pkgs/ovni/default.nix { };
     ovniGit = final.ovni.override { useGit = true; };
     paraverKernel = callPackage ./pkgs/paraver/kernel.nix { };
-    prometheus-slurm-exporter = prev.callPackage ./pkgs/slurm-exporter/default.nix { };
     #pscom = callPackage ./pkgs/parastation/pscom.nix { }; # Unmaintaned
     #psmpi = callPackage ./pkgs/parastation/psmpi.nix { }; # Unmaintaned
     sonar = callPackage ./pkgs/sonar/default.nix { };
@@ -57,7 +45,6 @@ let
     stdenvClangOmpss2NodesOmpv = final.stdenv.override { cc = final.clangOmpss2NodesOmpv; allowedRequisites = null; };
     tagaspi = callPackage ./pkgs/tagaspi/default.nix { };
     tampi = callPackage ./pkgs/tampi/default.nix { };
-    upc-qaire-exporter = prev.callPackage ./pkgs/upc-qaire-exporter/default.nix { };
     wxparaver = callPackage ./pkgs/paraver/default.nix { };
   };
 

pkgs/overlay.nix

@@ -0,0 +1,37 @@
+final: prev:
+{
+  slurm = prev.slurm.overrideAttrs (old: {
+    patches = (old.patches or []) ++ [
+      # See https://bugs.schedmd.com/show_bug.cgi?id=19324
+      ./slurm-rank-expansion.patch
+    ];
+    # Install also the pam_slurm_adopt library to restrict users from accessing
+    # nodes with no job allocated.
+    postBuild = (old.postBuild or "") + ''
+      pushd contribs/pam_slurm_adopt
+        make "PAM_DIR=$out/lib/security"
+      popd
+    '';
+    postInstall = (old.postInstall or "") + ''
+      pushd contribs/pam_slurm_adopt
+        make "PAM_DIR=$out/lib/security" install
+      popd
+    '';
+  });
+
+  prometheus-slurm-exporter = prev.callPackage ./slurm-exporter.nix { };
+  meteocat-exporter = prev.callPackage ./meteocat-exporter/default.nix { };
+  upc-qaire-exporter = prev.callPackage ./upc-qaire-exporter/default.nix { };
+  cudainfo = prev.callPackage ./cudainfo/default.nix { };
+
+  amd-uprof = prev.callPackage ./amd-uprof/default.nix { };
+
+  # FIXME: Extend this to all linuxPackages variants. Open problem, see:
+  # https://discourse.nixos.org/t/whats-the-right-way-to-make-a-custom-kernel-module-available/4636
+  linuxPackages = prev.linuxPackages.extend (_final: _prev: {
+    amd-uprof-driver = _prev.callPackage ./amd-uprof/driver.nix { };
+  });
+  linuxPackages_latest = prev.linuxPackages_latest.extend(_final: _prev: {
+    amd-uprof-driver = _prev.callPackage ./amd-uprof/driver.nix { };
+  });
+}