{ stdenv , config , stages , targetMachine , garlicTools , bsc , writeTextFile , runCommandLocal , python , pp }: with stdenv.lib; with garlicTools; let machineConf = targetMachine.config; in rec { /* Takes a list of units and builds an experiment, after executing the trebuchet, runexp and isolate stages. Returns the trebuchet stage. */ buildTrebuchet = units: let trebuchet = stages.trebuchet { inherit (machineConf) nixPrefix sshHost; nextStage = stages.runexp { inherit (machineConf) nixPrefix; nextStage = stages.isolate { inherit (machineConf) nixPrefix; nextStage = stages.experiment { inherit units; }; }; }; }; in trebuchet // rec { result = pp.store { trebuchet=trebuchet; experiment=trebuchet.experiment; }; timetable = pp.timetable result; }; /* Given an attrset of lists `varConf` and a function `genConf` that accepts a attrset, computes the cartesian product of all combinations of `varConf` calls genConf to produce the final list of configurations. */ buildConfigs = {varConf, genConf}: map (c: genConf c) (genConfigs varConf); stdStages = { sbatch = {nextStage, conf, ...}: with conf; stages.sbatch ( # Allow a user to define a custom reservation for the job in MareNostrum4, # by setting the garlic.sbatch.reservation attribute in the # ~/.config/nixpkgs/config.nix file. If the attribute is not set, no # reservation is used. The user reservation may be overwritten by the # experiment, if the reservation is set like with nodes or ntasksPerNode. optionalAttrs (config ? garlic.sbatch.reservation) { inherit (config.garlic.sbatch) reservation; } // # However, if the experiment contains a reservation, that takes priority # over the one set in the ~/.config/nixpkgs/config.nix file. Add other # options if they are defined as well. optionalInherit [ "reservation" "time" "qos" ] conf // # Finally, add all the other required parameters { inherit nextStage nixPrefix; # These sbatch options are mandatory inherit cpusPerTask ntasksPerNode nodes jobName; exclusive = true; } ); control = {nextStage, conf, ...}: stages.control { inherit (conf) loops; inherit nextStage; }; srun = {nextStage, conf, preSrun ? "", postSrun ? "", ...}: ( assert (assertMsg (!(conf ? cpuBind)) "cpuBind is no longer available in the standard srun stage"); stages.srun { inherit (conf) nixPrefix; inherit nextStage preSrun postSrun; # Binding is set to cores always cpuBind = "cores,verbose"; } ); isolate = {nextStage, conf, ...}: stages.isolate ( ( if (conf ? extraMounts) then { inherit (conf) extraMounts; } else {} ) // { clusterName = machineConf.name; inherit (conf) nixPrefix; inherit nextStage; } ); }; stdPipelineOverride = {overrides ? {}}: let stages = stdStages // overrides; in with stages; [ sbatch isolate control srun isolate ]; stdPipeline = stdPipelineOverride {}; replaceMpi = customMpi: bsc.extend (self: super: { mpi = customMpi; }); # Generate the experimental units genUnits = {configs, pipeline}: map (c: stages.unit { conf = c; stages = pipeline; }) configs; # Generate the complete experiment genExperiment = {configs, pipeline}: let units = genUnits { inherit configs pipeline; }; in buildTrebuchet units; # Runs a python script and the standard output is directly imported as # nix code printPython = code: let p = writeTextFile { name = "python-script"; text = '' from math import * ${code} ''; }; in import (runCommandLocal "a" { buildInputs = [ python ]; } '' python ${p} > $out''); }