library(ggplot2) library(dplyr, warn.conflicts = FALSE) library(scales) library(jsonlite) library(viridis, warn.conflicts = FALSE) library(stringr) args = commandArgs(trailingOnly=TRUE) # Set the input dataset if given in argv[1], or use "input" as default if (length(args)>0) { input_file = args[1] } else { input_file = "input" } if (length(args)>1) { output = args[2] } else { output = "?" } df = jsonlite::stream_in(file(input_file), verbose=FALSE) %>% jsonlite::flatten() %>% select(unit, config.blocksize, config.gitBranch, config.nodes, time) %>% rename(blocksize=config.blocksize, nodes=config.nodes, gitBranch=config.gitBranch) %>% # Remove the "garlic/" prefix from the gitBranch mutate(branch = str_replace(gitBranch, "garlic/", "")) %>% mutate(time.nodes = time * nodes) %>% mutate(unit = as.factor(unit)) %>% mutate(gitBranch = as.factor(gitBranch)) %>% mutate(branch = as.factor(branch)) %>% mutate(blocksize = as.factor(blocksize)) %>% mutate(nodes = as.factor(nodes)) %>% group_by(unit) %>% mutate(median.time = median(time)) %>% mutate(median.time.nodes = median(time.nodes)) %>% mutate(normalized.time = time / median.time - 1) %>% ungroup() dpi = 300 h = 6 w = 6 main_title = "FWI strong scaling" # --------------------------------------------------------------------- p = ggplot(df, aes(x=nodes, y=normalized.time)) + geom_boxplot() + geom_hline(yintercept=c(-0.01, 0.01), linetype="dashed", color="red") + theme_bw() + facet_wrap(branch ~ .) + labs(x="nodes", y="Normalized time", title=sprintf("%s: normalized time", main_title), subtitle=output) + theme(plot.subtitle=element_text(size=8)) ggsave("normalized.time.png", plot=p, width=w, height=h, dpi=dpi) ggsave("normalized.time.pdf", plot=p, width=w, height=h, dpi=dpi) # --------------------------------------------------------------------- p = ggplot(df, aes(x=nodes, y=time, color=gitBranch)) + geom_point(shape=21, size=3) + geom_line(aes(y=median.time, group=gitBranch)) + theme_bw() + # facet_wrap(branch ~ .) + labs(y="Time (s)", title=sprintf("%s: time", main_title), subtitle=output) + theme(plot.subtitle=element_text(size=8)) ggsave("time.png", plot=p, width=w, height=h, dpi=dpi) ggsave("time.pdf", plot=p, width=w, height=h, dpi=dpi) # --------------------------------------------------------------------- p = ggplot(df, aes(x=nodes, y=time.nodes, color=branch)) + geom_point(shape=21, size=3) + geom_line(aes(y=median.time.nodes, group=branch)) + theme_bw() + #facet_wrap(branch ~ .) + labs(x="nodes", y="Time * nodes (s)", title=sprintf("%s: time * nodes", main_title), subtitle=output) + theme(plot.subtitle=element_text(size=8)) ggsave("time.nodes.png", plot=p, width=w, height=h, dpi=dpi) ggsave("time.nodes.pdf", plot=p, width=w, height=h, dpi=dpi)