|
|
e4ab177d6c
|
saiph: remove dangerous Intel MPI envvar
It is no longer used, as we have moved to the release library version.
|
2021-03-30 17:56:26 +02:00 |
|
|
|
b7dcf7bc69
|
rplot: add support for gziped datasets
|
2021-03-30 16:35:47 +02:00 |
|
|
|
5ac581b573
|
creams: remove pure mpi from granularity
|
2021-03-30 16:14:32 +02:00 |
|
|
|
b900cb95f0
|
creams: make configurations unique
|
2021-03-30 16:14:11 +02:00 |
|
|
|
389d3f6310
|
creams: simplify granularity figure
|
2021-03-30 16:07:14 +02:00 |
|
|
|
76deac0a63
|
creams: update figures using one single pipeline
|
2021-03-30 15:59:52 +02:00 |
|
|
|
87f751185c
|
creams: merge similar experiments together
Large experiments have the enableExtended parameter disabled by default,
which enables more tests.
|
2021-03-30 15:55:57 +02:00 |
|
|
|
ec056d97e5
|
rplot: add total job time in the plots
|
2021-03-30 15:49:40 +02:00 |
|
|
|
872ad1a289
|
stdexp: allow preSrun attribute in the srun stage
This option allows an experiment to inject commands before srun starts,
while keeping the standard srun stage options.
|
2021-03-29 17:46:19 +02:00 |
|
Pedro Martinez
|
617ef21d38
|
creams: redefine granularity figures
|
2021-03-24 13:52:26 +01:00 |
|
Pedro Martinez
|
5cd9894636
|
creams: redefine granularity experiments
|
2021-03-24 13:52:26 +01:00 |
|
Pedro Martinez
|
bfc32ef4b7
|
creams: readjust granularity for strong scalability
|
2021-03-24 13:52:26 +01:00 |
|
Pedro Martinez
|
cb4d27aefb
|
creams: bugfix in granularity values
|
2021-03-24 13:52:26 +01:00 |
|
Pedro Martinez
|
d27c696259
|
creams: reduce granularity combinations to 8
|
2021-03-24 13:52:26 +01:00 |
|
Pedro Martinez
|
a55019c6ef
|
creams: add more nodes for granularity experiments
|
2021-03-24 13:52:26 +01:00 |
|
|
|
8a81c6bfba
|
creams: add granularity figure
Only the hybrid experiment is used by now
|
2021-03-24 13:52:26 +01:00 |
|
|
|
c59f298ae2
|
creams: reduce granularity experiment units
|
2021-03-24 13:52:26 +01:00 |
|
|
|
6818b29d02
|
creams: fix outdated nanos6.toml
This temporal fix allows the experiment to ignore the nanos6.toml in the
git repository, and only set version.dependencies variable.
|
2021-03-24 13:52:26 +01:00 |
|
Pedro Martinez
|
8445fb0928
|
creams: run the cp command in one process only
|
2021-03-24 13:52:26 +01:00 |
|
Pedro Martinez
|
1aa0e77157
|
creams: avoid race condition
Ensure only one Slurm process performs environment operations
|
2021-03-24 13:52:26 +01:00 |
|
Pedro Martinez
|
938246322f
|
creams: add OpenMP branches
|
2021-03-24 13:52:26 +01:00 |
|
Pedro Martinez
|
6c0f4ec1b3
|
creams: add granularity experiments
|
2021-03-24 13:52:26 +01:00 |
|
|
|
46f7add84c
|
garlicd: use head instead of the read builtin
It seems that bash is unable to propagate the SIGINT while
reading from the FIFO. This fixes the anoying ^C^C^C problems
found when running garlicd.
|
2021-03-22 18:43:01 +01:00 |
|
|
|
87fa3bb336
|
sbatch: assert types to avoid silent parse errors
|
2021-03-19 16:37:31 +01:00 |
|
|
|
74cd3d4fbc
|
rplot: fix fontconfig warning
|
2021-03-12 19:53:24 +01:00 |
|
|
|
c41456412c
|
examples: Add granularity examples
|
2021-03-12 19:33:40 +01:00 |
|
|
|
7d66b34140
|
nbody: fix converter rename in nanos6 CTF options
|
2021-03-12 12:58:41 +01:00 |
|
|
|
0781e8b28e
|
nbody: remove jemalloc experiments
Nanos6 has jemalloc enabled by default
|
2021-03-12 12:58:41 +01:00 |
|
|
|
88087bb4b7
|
nbody: add time-node plot
|
2021-03-12 12:58:41 +01:00 |
|
|
|
637c57b388
|
nbody: improve unit name
|
2021-03-12 12:58:41 +01:00 |
|
|
|
26ab2d9bbd
|
nbody: fix indentation in baseline R script
|
2021-03-12 12:58:41 +01:00 |
|
|
|
133ef50bb4
|
nbody: show time points
|
2021-03-12 12:58:41 +01:00 |
|
|
|
3a2694ad36
|
nbody: add mpi branch in scaling experiment
|
2021-03-12 12:58:37 +01:00 |
|
|
|
5804b167db
|
nbody: add scaling figure
|
2021-03-12 12:57:01 +01:00 |
|
|
|
425479c9fc
|
nbody: add scaling experiment
|
2021-03-12 12:57:01 +01:00 |
|
|
|
a286488979
|
rplot: add egg package for ggarange function
|
2021-03-12 12:56:58 +01:00 |
|
|
|
d70adae9ec
|
heat: add figure for the mode experiment
|
2021-03-12 12:14:51 +01:00 |
|
|
|
854707103c
|
heat: add ctf stage to analyze mode times
|
2021-03-12 12:13:10 +01:00 |
|
|
|
972be56eed
|
heat: patch to print the start and end time
It will be used to cut the CTF traces to take only the computation part
in cosideration.
|
2021-03-12 12:11:24 +01:00 |
|
|
|
56c625bfe4
|
ds: add ctf mode analysis
|
2021-03-12 12:10:18 +01:00 |
|
|
|
3445a72686
|
garlic tool: copy recursively from .garlic/
It allows an experiment to store a CTF trace in the resultTree (which is
not recommended for large traces).
|
2021-03-12 11:13:35 +01:00 |
|
|
|
b192fc44f5
|
heat: refactor cache into granul experiment
|
2021-03-09 18:45:33 +01:00 |
|
|
|
7b4da07dbf
|
heat: add more figures from perf counters
|
2021-03-09 18:21:59 +01:00 |
|
|
|
3bcbc62a98
|
fig: add fig.heat.cache to fig.article
|
2021-03-09 18:21:22 +01:00 |
|
|
|
52360c9459
|
rplot: add viridis R package
|
2021-03-09 18:20:40 +01:00 |
|
|
|
71a1396955
|
ds: parse time with perf generator
|
2021-03-09 11:07:19 +01:00 |
|
|
|
b600f64fcc
|
heat: add cache miss experiment and figure
|
2021-03-05 18:31:31 +01:00 |
|
|
|
14fbb1499b
|
ds: add perf stat parser
We can only read one output file by now, located at:
.garlic/perf.csv
|
2021-03-05 18:29:43 +01:00 |
|
|
|
c1efba1e65
|
heat: rename test -> granul experiment
|
2021-03-05 18:28:32 +01:00 |
|
|
|
29d7245135
|
heat: add figure with heatmap
|
2021-03-05 16:21:13 +01:00 |
|
|
|
363700eb9a
|
heat: update test experiment
|
2021-03-05 16:18:51 +01:00 |
|
|
|
7e10a43b40
|
heat: update new app version
The blocksize is now specified at runtime
|
2021-03-05 16:16:06 +01:00 |
|
|
|
6b6b54f757
|
timetable: add total_time column
|
2021-03-03 19:00:36 +01:00 |
|
|
|
5afe819724
|
osu: add impi figure
|
2021-03-03 12:42:19 +01:00 |
|
|
|
651d91ef79
|
fig: improve indentation
|
2021-03-03 12:42:19 +01:00 |
|
|
|
14211c9895
|
osu: use ggsave and reduce verbosity
|
2021-03-03 12:42:19 +01:00 |
|
|
|
6973f48638
|
osu: add an experiment for Intel MPI tunning
|
2021-03-03 12:42:19 +01:00 |
|
|
|
4786953eeb
|
garlic: fix self/super with correct scope
The callPackage function was trying to find packages in bsc.self before
the self of the input parameters.
|
2021-03-03 12:42:19 +01:00 |
|
|
|
a6815dc7cf
|
fig: add article figure directory
|
2021-03-03 12:41:31 +01:00 |
|
|
|
4ffb609261
|
osu: add figures using the fast generators
|
2021-03-01 12:21:10 +01:00 |
|
|
|
1d015c7e1e
|
ds: add osu fast generators
|
2021-03-01 12:00:58 +01:00 |
|
|
|
ed932c9921
|
osu: add bw test
|
2021-03-01 11:58:23 +01:00 |
|
|
|
a36d912022
|
osu: add multithread benchmark
|
2021-03-01 11:55:13 +01:00 |
|
|
|
8373751f67
|
rplot: remove suffix from input link
We may have compressed input datasets
|
2021-03-01 11:41:28 +01:00 |
|
|
|
2f7032aca6
|
pp: remove unused derivations and helpers
|
2021-03-01 11:40:56 +01:00 |
|
|
|
6dd41fd96f
|
fig: use the fast timetable generator by default
|
2021-03-01 11:38:28 +01:00 |
|
|
|
09a0348b0e
|
ds: add fast timetable generator
|
2021-03-01 11:16:03 +01:00 |
|
|
|
051a74b85d
|
srun: allow commands to run before srun
|
2021-02-26 17:00:09 +01:00 |
|
|
|
8a77900201
|
srun: don't expand variables on install
|
2021-02-26 16:59:29 +01:00 |
|
|
|
1291b90b7f
|
user guide: correct typo
|
2021-02-26 12:18:50 +01:00 |
|
|
|
8e130604aa
|
machines: set the hardware revision for MN4
This change will cause a rebuild of all experiments.
|
2021-02-25 20:45:20 +01:00 |
|
|
|
0015c7e4cd
|
pp: remove launcher
It has now been integrated with resultTree in pp/store.nix
|
2021-02-25 12:29:12 +01:00 |
|
|
|
9612c69aec
|
doc: add garlic configuration section
Update the garlicd usage as well.
|
2021-02-25 11:38:29 +01:00 |
|
|
|
6e0e2f0bf6
|
garlicd: drop bscpkgs argument requirement
The bscpkgs/default.nix is not longer read, as the garlic tool only
needs it for the fetching (-F), when it runs nix-build.
|
2021-02-25 11:38:29 +01:00 |
|
|
|
48820ee2d3
|
resultTree: garlic must be used from the nix shell
|
2021-02-25 11:38:29 +01:00 |
|
|
|
9277e60079
|
timetable: enable verbose processing
|
2021-02-25 11:38:29 +01:00 |
|
|
|
c869b6e3b4
|
garlic: enable verbose rsync fetch
|
2021-02-25 11:38:29 +01:00 |
|
|
|
0b95ea20b7
|
garlicd: allow manual experiment executions
|
2021-02-25 11:37:58 +01:00 |
|
|
|
ceb25e5d18
|
osu: add figure for latency tests
|
2021-02-23 17:52:48 +01:00 |
|
|
|
0c9e89dcc0
|
osu: update experiments using stdexp
|
2021-02-23 15:22:56 +01:00 |
|
|
|
ebcbf91fbe
|
exec: allow manual specification of program path
|
2021-02-23 15:22:18 +01:00 |
|
|
|
3e2b369e3e
|
garlicd: allow nix builders write to the pipes
|
2021-02-17 10:28:34 +01:00 |
|
|
|
d4947a40b9
|
Fix ssh missing shell
|
2021-02-17 10:28:11 +01:00 |
|
|
|
243d022620
|
cn6: update name and add to the shell
|
2021-02-15 17:44:20 +01:00 |
|
|
|
0ee2747215
|
garlicd: avoid no match fail
We check the result in the next if.
|
2021-02-15 16:32:06 +01:00 |
|
|
|
5fd2a62684
|
doc: update garlicd usage from the nix-shell
|
2021-02-15 16:22:45 +01:00 |
|
|
|
0e0bf9e7a7
|
garlic: add shell with the garlic tools
|
2021-02-15 16:22:06 +01:00 |
|
|
|
cb5bcd7097
|
garlicd: add to index and check for error
The garlicd is now available under garlic.garlid and it requires the
extra-sandbox-path option to be properly set.
|
2021-02-15 16:20:06 +01:00 |
|
|
|
d51fe5db48
|
garlic tool: ensure the mountpoint is enabled
|
2021-02-15 16:18:21 +01:00 |
|
|
|
c36b724e9a
|
Add experimental garlicd doc
|
2021-02-15 13:00:19 +01:00 |
|
|
|
cdf48181e5
|
user guide: add time measurement sections
|
2021-02-08 19:05:46 +01:00 |
|
|
|
a6b7b14d5e
|
user guide: add initialization time limit
|
2021-02-08 19:05:46 +01:00 |
|
|
|
2ca58c46b4
|
user guide: Add postprocessing section
|
2021-02-08 19:05:46 +01:00 |
|
|
|
25208a8158
|
user guide: add tar.gz target for the web
|
2021-02-08 19:05:19 +01:00 |
|
|
|
c46feb4bf2
|
user guide: use ms macros
Added HTML output
|
2021-02-08 19:05:19 +01:00 |
|
|
|
4d626bff97
|
user guide: test ms macros
|
2021-02-08 19:05:19 +01:00 |
|
|
|
042876a287
|
user guide: generate html with css
|
2021-02-08 19:05:19 +01:00 |
|
|
|
edd71815eb
|
pp: fix code block for html
|
2021-02-08 19:05:19 +01:00 |
|
|
|
39c360b413
|
user guide: add readme and branch name conventions
|
2021-02-08 19:04:51 +01:00 |
|
|
|
3ce0d3934b
|
user guide: reorder development
|
2021-02-08 19:04:45 +01:00 |
|
