WIP: Add mpi, omp and mpi+omp experiments. See more.
Seems that gcc compilation with OpenMP throws an error. Investigate. I think I've forgot to add an override of mpicxx compiler backend
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@ -1,11 +1,11 @@
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{
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stdenv
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, cc
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, mpi
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, gitBranch ? "garlic/seq"
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, makefileName ? "Linux_Serial"
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, mpi ? null
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, gitBranch
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}:
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with stdenv.lib;
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stdenv.mkDerivation rec {
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name = "hpcg";
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@ -20,8 +20,8 @@ stdenv.mkDerivation rec {
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buildInputs = [
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cc
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mpi
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];
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]
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++ optional (mpi != null) mpi;
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makeFlags = [
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"CC=${cc.cc.CC}"
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@ -30,12 +30,6 @@ stdenv.mkDerivation rec {
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enableParallelBuilding = true;
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configurePhase = ''
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mkdir build
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cd build
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../configure ${makefileName}
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'';
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installPhase = ''
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mkdir -p $out/bin
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cp bin/* $out/bin/
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63
garlic/exp/hpcg/mpi+omp.nix
Normal file
63
garlic/exp/hpcg/mpi+omp.nix
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@ -0,0 +1,63 @@
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{
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stdenv
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, stdexp
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, bsc
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, targetMachine
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, stages
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}:
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with stdenv.lib;
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let
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# Initial variable configuration
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varConf = with bsc; {
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n = [ 104 64 ];
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};
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# Generate the complete configuration for each unit
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genConf = with bsc; c: targetMachine.config // rec {
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# hpcg options
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n = c.n;
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cc = icc;
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mpi = impi;
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gitBranch = "garlic/mpi+omp";
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# Repeat the execution of each unit 30 times
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loops = 30;
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# Resources
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qos = "debug";
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ntasksPerNode = 48;
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nodes = 1;
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time = "02:00:00";
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cpuBind = "sockets,verbose";
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jobName = "hpcg-${toString n}-${gitBranch}";
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};
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# Compute the array of configurations
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configs = stdexp.buildConfigs {
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inherit varConf genConf;
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};
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exec = {nextStage, conf, ...}: with conf; stages.exec {
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inherit nextStage;
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argv = [
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"--nx=${toString n}"
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"--ny=${toString n}"
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"--nz=${toString n}"
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];
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};
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program = {nextStage, conf, ...}: with conf;
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let
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customPkgs = stdexp.replaceMpi conf.mpi;
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in
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customPkgs.apps.hpcg.override {
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inherit cc mpi gitBranch;
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};
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pipeline = stdexp.stdPipeline ++ [ exec program ];
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in
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stdexp.genExperiment { inherit configs pipeline; }
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@ -21,8 +21,6 @@ let
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cc = icc;
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mpi = impi;
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gitBranch = "garlic/mpi";
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# FIXME: fix this option in the garlic/mpi git branch
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makefileName = "MPI";
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# Repeat the execution of each unit 30 times
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loops = 30;
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@ -55,7 +53,7 @@ let
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customPkgs = stdexp.replaceMpi conf.mpi;
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in
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customPkgs.apps.hpcg.override {
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inherit cc mpi gitBranch makefileName;
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inherit cc mpi gitBranch;
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};
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pipeline = stdexp.stdPipeline ++ [ exec program ];
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63
garlic/exp/hpcg/omp.nix
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63
garlic/exp/hpcg/omp.nix
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@ -0,0 +1,63 @@
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{
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stdenv
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, stdexp
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, bsc
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, targetMachine
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, stages
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}:
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with stdenv.lib;
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let
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# Initial variable configuration
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varConf = with bsc; {
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n = [ 104 64 ];
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};
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# Generate the complete configuration for each unit
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genConf = with bsc; c: targetMachine.config // rec {
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# hpcg options
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n = c.n;
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cc = icc;
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mpi = null; # TODO: Remove this for omp
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gitBranch = "garlic/seq";
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# Repeat the execution of each unit 30 times
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loops = 30;
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# Resources
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qos = "debug";
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ntasksPerNode = 48;
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nodes = 1;
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time = "02:00:00";
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cpuBind = "sockets,verbose";
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jobName = "hpcg-${toString n}-${gitBranch}";
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};
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# Compute the array of configurations
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configs = stdexp.buildConfigs {
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inherit varConf genConf;
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};
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exec = {nextStage, conf, ...}: with conf; stages.exec {
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inherit nextStage;
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argv = [
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"--nx=${toString n}"
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"--ny=${toString n}"
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"--nz=${toString n}"
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];
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};
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program = {nextStage, conf, ...}: with conf;
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let
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customPkgs = stdexp.replaceMpi conf.mpi;
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in
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customPkgs.apps.hpcg.override {
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inherit cc gitBranch;
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};
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pipeline = stdexp.stdPipeline ++ [ exec program ];
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in
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stdexp.genExperiment { inherit configs pipeline; }
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@ -19,7 +19,7 @@ let
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# hpcg options
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n = c.n;
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cc = icc;
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mpi = impi;
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mpi = null; # TODO: Remove this for serial
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gitBranch = "garlic/seq";
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# Repeat the execution of each unit 30 times
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@ -199,7 +199,8 @@ let
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hpcg = callPackage ./garlic/apps/hpcg/default.nix {
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cc = self.bsc.icc;
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gitBranch = "garlic/seq";
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mpi = self.bsc.impi;
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gitBranch = "garlic/mpi+omp";
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};
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# heat = callPackage ./garlic/apps/heat {
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@ -262,8 +263,8 @@ let
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hpcg = {
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serial = callPackage ./garlic/exp/hpcg/serial.nix { };
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mpi = callPackage ./garlic/exp/hpcg/mpi.nix { };
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# omp = callPackage ./garlic/exp/hpcg/omp.nix { };
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# mpi+omp = callPackage ./garlic/exp/hpcg/mpi+omp.nix { };
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omp = callPackage ./garlic/exp/hpcg/omp.nix { };
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mpi_omp = callPackage ./garlic/exp/hpcg/mpi+omp.nix { };
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};
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test = {
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