bscpkgs/garlic/fig/hpcg/ss.R

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library(ggplot2)
library(dplyr, warn.conflicts = FALSE)
library(scales)
library(jsonlite)
library(viridis, warn.conflicts = FALSE)
args = commandArgs(trailingOnly=TRUE)
if (length(args)>0) { input_file = args[1] } else { input_file = "input" }
df = jsonlite::stream_in(file(input_file), verbose=FALSE) %>%
jsonlite::flatten() %>%
select(config.nblocks,
config.hw.cpusPerSocket,
config.nodes,
config.nprocs.x,
config.nprocs.y,
config.nprocs.z,
config.blocksPerCpu,
config.sizePerCpu.z,
unit,
time
) %>%
rename(nblocks=config.nblocks,
cpusPerSocket=config.hw.cpusPerSocket,
nodes=config.nodes,
blocksPerCpu=config.blocksPerCpu,
sizePerCpu.z=config.sizePerCpu.z,
npx=config.nprocs.x,
npy=config.nprocs.y,
npz=config.nprocs.z
) %>%
mutate(time.sizeZ = time / sizePerCpu.z) %>%
mutate(time.nodes = time * nodes) %>%
mutate(axisColor=as.factor(ifelse(npx != 1, "X", ifelse(npy != 1, "Y", "Z")))) %>%
mutate(nblocks = as.factor(nblocks)) %>%
mutate(blocksPerCpu = as.factor(blocksPerCpu)) %>%
mutate(nodes = as.factor(nodes)) %>%
mutate(unit = as.factor(unit)) %>%
mutate(sizePerCpu.z = as.factor(sizePerCpu.z)) %>%
group_by(unit) %>%
mutate(median.time = median(time)) %>%
mutate(normalized.time = time / median.time - 1) %>%
mutate(log.median.time = log(median.time)) %>%
ungroup()
dpi=300
h=7
w=7
p = ggplot(df, aes(x=nodes, y=time.nodes)) +
geom_boxplot() +
theme_bw() +
labs(x="Nodes", y="Time * nodes (s)",
title="HPCG strong scalability in Z",
subtitle=input_file) +
theme(plot.subtitle=element_text(size=8),
legend.position="bottom")
ggsave("time.nodes.png", plot=p, width=w, height=h, dpi=dpi)
ggsave("time.nodes.pdf", plot=p, width=w, height=h, dpi=dpi)
p = ggplot(df, aes(x=nodes, y=time.sizeZ, fill=sizePerCpu.z)) +
geom_boxplot() +
theme_bw() +
labs(x="Nodes", y="Time / npcz (s)", title="HPCG strong scalability in Z",
color="Size per CPU in Z",
subtitle=input_file) +
theme(plot.subtitle=element_text(size=8),
legend.position="bottom")
ggsave("time.size.png", plot=p, width=w, height=h, dpi=dpi)
ggsave("time.size.pdf", plot=p, width=w, height=h, dpi=dpi)