Update versions to 2025.2

New apt list does not have Package: as the first entry for all packages

.gitea/workflows/ci.yaml

@@ -12,9 +12,4 @@ jobs:
     runs-on: native
     steps:
       - uses: https://gitea.com/ScMi1/checkout@v1.4
-      - run: nix build -L --no-link --print-out-paths .#bsc.ci.all
+      - run: nix build -L --no-link --print-out-paths .#bsc-ci.all
-  build:cross:
-    runs-on: native
-    steps:
-      - uses: https://gitea.com/ScMi1/checkout@v1.4
-      - run: nix build -L --no-link --print-out-paths .#bsc.ci.cross

doc/maintainers.md

@@ -1,30 +0,0 @@
-# Maintainers
-
-## Role of a maintainer
-The responsibilities of maintainers are quite lax, and similar in spirit to
-[nixpkgs' maintainers][1]:
-
-    The main responsibility of a maintainer is to keep the packages they
-    maintain in a functioning state, and keep up with updates. In order to do
-    that, they are empowered to make decisions over the packages they maintain.
-
-    That being said, the maintainer is not alone in proposing changes to the
-    packages. Anybody (both bots and humans) can send PRs to bump or tweak the
-    package.
-
-In practice, this means that when updating or proposing changes to a package,
-we will notify maintainers by mentioning them in Gitea so they can test changes
-and give feedback.
-
-Since we do bi-yearly release cycles, there is no expectation from maintainers
-to update packages at each upstream release. Nevertheless, on each release cycle
-we may request help from maintainers when updating or testing their packages.
-
-## Becoming a maintainer
-
-
-You'll have to add yourself in the `maintainers.nix` list; your username should
-match your `bsc.es` email. Then you can add yourself to the `meta.maintainers`
-of any package you are interested in maintaining.
-
-[1]: [https://github.com/NixOS/nixpkgs/tree/nixos-25.05/maintainers]

flake.lock

@@ -1,25 +1,107 @@
 {
   "nodes": {
+    "agenix": {
+      "inputs": {
+        "darwin": "darwin",
+        "home-manager": "home-manager",
+        "nixpkgs": [
+          "nixpkgs"
+        ],
+        "systems": "systems"
+      },
+      "locked": {
+        "lastModified": 1750173260,
+        "narHash": "sha256-9P1FziAwl5+3edkfFcr5HeGtQUtrSdk/MksX39GieoA=",
+        "owner": "ryantm",
+        "repo": "agenix",
+        "rev": "531beac616433bac6f9e2a19feb8e99a22a66baf",
+        "type": "github"
+      },
+      "original": {
+        "owner": "ryantm",
+        "repo": "agenix",
+        "type": "github"
+      }
+    },
+    "darwin": {
+      "inputs": {
+        "nixpkgs": [
+          "agenix",
+          "nixpkgs"
+        ]
+      },
+      "locked": {
+        "lastModified": 1744478979,
+        "narHash": "sha256-dyN+teG9G82G+m+PX/aSAagkC+vUv0SgUw3XkPhQodQ=",
+        "owner": "lnl7",
+        "repo": "nix-darwin",
+        "rev": "43975d782b418ebf4969e9ccba82466728c2851b",
+        "type": "github"
+      },
+      "original": {
+        "owner": "lnl7",
+        "ref": "master",
+        "repo": "nix-darwin",
+        "type": "github"
+      }
+    },
+    "home-manager": {
+      "inputs": {
+        "nixpkgs": [
+          "agenix",
+          "nixpkgs"
+        ]
+      },
+      "locked": {
+        "lastModified": 1745494811,
+        "narHash": "sha256-YZCh2o9Ua1n9uCvrvi5pRxtuVNml8X2a03qIFfRKpFs=",
+        "owner": "nix-community",
+        "repo": "home-manager",
+        "rev": "abfad3d2958c9e6300a883bd443512c55dfeb1be",
+        "type": "github"
+      },
+      "original": {
+        "owner": "nix-community",
+        "repo": "home-manager",
+        "type": "github"
+      }
+    },
     "nixpkgs": {
       "locked": {
-        "lastModified": 1764522689,
+        "lastModified": 1752436162,
-        "narHash": "sha256-SqUuBFjhl/kpDiVaKLQBoD8TLD+/cTUzzgVFoaHrkqY=",
+        "narHash": "sha256-Kt1UIPi7kZqkSc5HVj6UY5YLHHEzPBkgpNUByuyxtlw=",
         "owner": "NixOS",
         "repo": "nixpkgs",
-        "rev": "8bb5646e0bed5dbd3ab08c7a7cc15b75ab4e1d0f",
+        "rev": "dfcd5b901dbab46c9c6e80b265648481aafb01f8",
         "type": "github"
       },
       "original": {
         "owner": "NixOS",
-        "ref": "nixos-25.11",
+        "ref": "nixos-25.05",
         "repo": "nixpkgs",
         "type": "github"
       }
     },
     "root": {
       "inputs": {
+        "agenix": "agenix",
         "nixpkgs": "nixpkgs"
       }
+    },
+    "systems": {
+      "locked": {
+        "lastModified": 1681028828,
+        "narHash": "sha256-Vy1rq5AaRuLzOxct8nz4T6wlgyUR7zLU309k9mBC768=",
+        "owner": "nix-systems",
+        "repo": "default",
+        "rev": "da67096a3b9bf56a91d16901293e51ba5b49a27e",
+        "type": "github"
+      },
+      "original": {
+        "owner": "nix-systems",
+        "repo": "default",
+        "type": "github"
+      }
     }
   },
   "root": "root",

flake.nix

@@ -1,13 +1,15 @@
 {
   inputs = {
-    nixpkgs.url = "github:NixOS/nixpkgs/nixos-25.11";
+    nixpkgs.url = "github:NixOS/nixpkgs/nixos-25.05";
+    agenix.url = "github:ryantm/agenix";
+    agenix.inputs.nixpkgs.follows = "nixpkgs";
   };
 
-  outputs = { self, nixpkgs, ... }:
+  outputs = { self, nixpkgs, agenix, ... }:
 let
   mkConf = name: nixpkgs.lib.nixosSystem {
     system = "x86_64-linux";
-    specialArgs = { inherit nixpkgs; theFlake = self; };
+    specialArgs = { inherit nixpkgs agenix; theFlake = self; };
     modules = [ "${self.outPath}/m/${name}/configuration.nix" ];
   };
   # For now we only support x86
@@ -40,13 +42,11 @@ in
     # full nixpkgs with our overlay applied
     legacyPackages.${system} = pkgs;
 
-    hydraJobs = self.legacyPackages.${system}.bsc.hydraJobs;
+    hydraJobs = {
+      inherit (self.legacyPackages.${system}.bsc-ci) tests pkgs cross;
+    };
 
     # propagate nixpkgs lib, so we can do bscpkgs.lib
-    lib = nixpkgs.lib // {
+    inherit (nixpkgs) lib;
-      maintainers = nixpkgs.lib.maintainers // {
-        bsc = import ./pkgs/maintainers.nix;
-      };
-    };
   };
 }

m/common/base.nix

@@ -11,7 +11,6 @@
     ./base/hw.nix
     ./base/net.nix
     ./base/nix.nix
-    ./base/sys-devices.nix
     ./base/ntp.nix
     ./base/rev.nix
     ./base/ssh.nix

m/common/base/agenix.nix

@@ -1,8 +1,9 @@
-{ pkgs, ... }:
+{ agenix, ... }:
 
 {
-  imports = [ ../../module/agenix.nix ];
+  imports = [ agenix.nixosModules.default ];
 
-  # Add agenix to system packages
+  environment.systemPackages = [
-  environment.systemPackages = [ pkgs.agenix ];
+    agenix.packages.x86_64-linux.default
+  ];
 }

m/common/base/env.nix

@@ -1,12 +1,12 @@
-{ pkgs, ... }:
+{ pkgs, config, ... }:
 
 {
   environment.systemPackages = with pkgs; [
     vim wget git htop tmux pciutils tcpdump ripgrep nix-index nixos-option
     nix-diff ipmitool freeipmi ethtool lm_sensors cmake gnumake file tree
-    ncdu perf ldns pv
+    ncdu config.boot.kernelPackages.perf ldns pv
-    # From jungle overlay
+    # From bsckgs overlay
-    osumb nixgen
+    osumb
   ];
 
   programs.direnv.enable = true;

m/common/base/sys-devices.nix

@@ -1,9 +0,0 @@
-{
-  nix.settings.system-features = [ "sys-devices" ];
-
-  programs.nix-required-mounts.enable = true;
-  programs.nix-required-mounts.allowedPatterns.sys-devices.paths = [
-    "/sys/devices/system/cpu"
-    "/sys/devices/system/node"
-  ];
-}

m/common/base/users.nix

@@ -180,19 +180,6 @@
           "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIFmMqKqPg4uocNOr3O41kLbZMOMJn3m2ZdN1JvTR96z3 bsccns@arnau-bsc"
         ];
       };
-
-      aaguirre = {
-        uid = 9655;
-        isNormalUser = true;
-        home = "/home/Computational/aaguirre";
-        description = "Alejandro Aguirre";
-        group = "Computational";
-        hosts = [ "apex" "hut" ];
-        hashedPassword = "$6$TXRXQT6jjBvxkxU6$E.sh5KspAm1qeG5Ct7OPHpo8REmbGDwjFGvqeGgTVz3GASGOAnPL7UMZsMAsAKBoahOw.v8LNno6XGrTEPzZH1";
-        openssh.authorizedKeys.keys = [
-          "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIOlRX7ZCnqtUJYCxKgWmgSrFCYuA2LHY96rVwqxXPl86 aaguirre@BSC-8488184117"
-        ];
-      };
     };
 
     groups = {

m/common/base/watchdog.nix

@@ -5,5 +5,5 @@
   boot.kernelModules = [ "ipmi_watchdog" ];
 
   # Enable systemd watchdog with 30 s interval
-  systemd.settings.Manager.RuntimeWatchdogSec = 30;
+  systemd.watchdog.runtimeTime = "30s";
 }

m/fox/configuration.nix

@@ -93,4 +93,20 @@
     wantedBy = [ "multi-user.target" ];
     serviceConfig.ExecStart = script;
   };
+
+  # Only allow SSH connections from users who have a SLURM allocation
+  # See: https://slurm.schedmd.com/pam_slurm_adopt.html
+  security.pam.services.sshd.rules.account.slurm = {
+    control = "required";
+    enable = true;
+    modulePath = "${pkgs.slurm}/lib/security/pam_slurm_adopt.so";
+    args = [ "log_level=debug5" ];
+    order = 999999; # Make it last one
+  };
+
+  # Disable systemd session (pam_systemd.so) as it will conflict with the
+  # pam_slurm_adopt.so module. What happens is that the shell is first adopted
+  # into the slurmstepd task and then into the systemd session, which is not
+  # what we want, otherwise it will linger even if all jobs are gone.
+  security.pam.services.sshd.startSession = lib.mkForce false;
 }

m/hut/configuration.nix

@@ -17,7 +17,6 @@
     ./postgresql.nix
     ./nginx.nix
     ./p.nix
-    ./ompss2-timer.nix
     #./pxe.nix
   ];
 

m/hut/gitea.nix

@@ -29,9 +29,6 @@
     };
   };
 
-  # Allow gitea user to send mail
-  users.users.gitea.extraGroups = [ "mail-robot" ];
-
   services.gitea-actions-runner.instances = {
     runrun = {
       enable = true;

m/hut/msmtp.nix

@@ -1,11 +1,8 @@
 { config, lib, ... }:
 {
-  # Robot user that can see the password to send mail from jungle-robot
-  users.groups.mail-robot = {};
-
   age.secrets.jungleRobotPassword = {
     file = ../../secrets/jungle-robot-password.age;
-    group = "mail-robot";
+    group = "gitea";
     mode = "440";
   };
 

m/hut/nginx.nix

@@ -4,8 +4,8 @@ let
     name = "jungle-web";
     src = pkgs.fetchgit {
       url = "https://jungle.bsc.es/git/rarias/jungle-website.git";
-      rev = "52abaf4d71652a9ef77a0b098db14ca33bffff4c";
+      rev = "739bf0175a7f05380fe7ad7023ff1d60db1710e1";
-      hash = "sha256-/ul9GazbOrOkmlvSgDz/+2W+V+ir5725Y7mVLc3rb0M=";
+      hash = "sha256-ea5DzhYTzZ9TmqD+x95rdNdLbxPnBluqlYH2NmBYmc4=";
     };
     buildInputs = [ pkgs.hugo ];
     buildPhase = ''

m/hut/ompss2-timer.nix

@@ -1,85 +0,0 @@
-{ config, pkgs, ... }:
-{
-  systemd.timers = {
-    "ompss2-closing" = {
-      wantedBy = [ "timers.target" ];
-      timerConfig = {
-        Unit = "ompss2-closing.service";
-        OnCalendar = [ "*-03-15 07:00:00" "*-09-15 07:00:00"];
-      };
-    };
-    "ompss2-freeze" = {
-      wantedBy = [ "timers.target" ];
-      timerConfig = {
-        Unit = "ompss2-freeze.service";
-        OnCalendar = [ "*-04-15 07:00:00" "*-10-15 07:00:00" ];
-      };
-    };
-    "ompss2-release" = {
-      wantedBy = [ "timers.target" ];
-      timerConfig = {
-        Unit = "ompss2-release.service";
-        OnCalendar = [ "*-05-15 07:00:00" "*-11-15 07:00:00" ];
-      };
-    };
-  };
-
-  systemd.services =
-  let
-    closing = pkgs.writeText "closing.txt"
-    ''
-      Subject: OmpSs-2 release enters closing period
-
-      Hi,
-
-      You have one month to merge the remaining features for the next OmpSs-2
-      release. Please, identify what needs to be merged and discuss it in the next
-      OmpSs-2 meeting.
-
-      Thanks!,
-      Jungle robot
-    '';
-    freeze = pkgs.writeText "freeze.txt"
-    ''
-      Subject: OmpSs-2 release enters freeze period
-
-      Hi,
-
-      The period to introduce new features or breaking changes is over, only bug
-      fixes are allowed now. During this time, please prepare the release notes
-      to be included in the next OmpSs-2 release.
-
-      Thanks!,
-      Jungle robot
-    '';
-    release = pkgs.writeText "release.txt"
-    ''
-      Subject: OmpSs-2 release now
-
-      Hi,
-
-      The period to introduce bug fixes is now over. Please, proceed to do the
-      OmpSs-2 release.
-
-      Thanks!,
-      Jungle robot
-    '';
-    mkServ = name: mail: {
-      "ompss2-${name}" = {
-        script = ''
-          set -eu
-          set -o pipefail
-          cat ${mail} | ${config.security.wrapperDir}/sendmail star@bsc.es
-        '';
-        serviceConfig = {
-          Type = "oneshot";
-          DynamicUser = true;
-          Group = "mail-robot";
-        };
-      };
-    };
-  in
-    (mkServ "closing" closing) //
-    (mkServ "freeze" freeze) //
-    (mkServ "release" release);
-}

m/module/agenix.nix

@@ -1,357 +0,0 @@
-{
-  config,
-  options,
-  lib,
-  pkgs,
-  ...
-}:
-with lib;
-let
-  cfg = config.age;
-
-  isDarwin = lib.attrsets.hasAttrByPath [ "environment" "darwinConfig" ] options;
-
-  ageBin = config.age.ageBin;
-
-  users = config.users.users;
-
-  sysusersEnabled =
-    if isDarwin then
-      false
-    else
-      options.systemd ? sysusers && (config.systemd.sysusers.enable || config.services.userborn.enable);
-
-  mountCommand =
-    if isDarwin then
-      ''
-        if ! diskutil info "${cfg.secretsMountPoint}" &> /dev/null; then
-            num_sectors=1048576
-            dev=$(hdiutil attach -nomount ram://"$num_sectors" | sed 's/[[:space:]]*$//')
-            newfs_hfs -v agenix "$dev"
-            mount -t hfs -o nobrowse,nodev,nosuid,-m=0751 "$dev" "${cfg.secretsMountPoint}"
-        fi
-      ''
-    else
-      ''
-        grep -q "${cfg.secretsMountPoint} ramfs" /proc/mounts ||
-          mount -t ramfs none "${cfg.secretsMountPoint}" -o nodev,nosuid,mode=0751
-      '';
-  newGeneration = ''
-    _agenix_generation="$(basename "$(readlink ${cfg.secretsDir})" || echo 0)"
-    (( ++_agenix_generation ))
-    echo "[agenix] creating new generation in ${cfg.secretsMountPoint}/$_agenix_generation"
-    mkdir -p "${cfg.secretsMountPoint}"
-    chmod 0751 "${cfg.secretsMountPoint}"
-    ${mountCommand}
-    mkdir -p "${cfg.secretsMountPoint}/$_agenix_generation"
-    chmod 0751 "${cfg.secretsMountPoint}/$_agenix_generation"
-  '';
-
-  chownGroup = if isDarwin then "admin" else "keys";
-  # chown the secrets mountpoint and the current generation to the keys group
-  # instead of leaving it root:root.
-  chownMountPoint = ''
-    chown :${chownGroup} "${cfg.secretsMountPoint}" "${cfg.secretsMountPoint}/$_agenix_generation"
-  '';
-
-  setTruePath = secretType: ''
-    ${
-      if secretType.symlink then
-        ''
-          _truePath="${cfg.secretsMountPoint}/$_agenix_generation/${secretType.name}"
-        ''
-      else
-        ''
-          _truePath="${secretType.path}"
-        ''
-    }
-  '';
-
-  installSecret = secretType: ''
-    ${setTruePath secretType}
-    echo "decrypting '${secretType.file}' to '$_truePath'..."
-    TMP_FILE="$_truePath.tmp"
-
-    IDENTITIES=()
-    for identity in ${toString cfg.identityPaths}; do
-      test -r "$identity" || continue
-      test -s "$identity" || continue
-      IDENTITIES+=(-i)
-      IDENTITIES+=("$identity")
-    done
-
-    test "''${#IDENTITIES[@]}" -eq 0 && echo "[agenix] WARNING: no readable identities found!"
-
-    mkdir -p "$(dirname "$_truePath")"
-    [ "${secretType.path}" != "${cfg.secretsDir}/${secretType.name}" ] && mkdir -p "$(dirname "${secretType.path}")"
-    (
-      umask u=r,g=,o=
-      test -f "${secretType.file}" || echo '[agenix] WARNING: encrypted file ${secretType.file} does not exist!'
-      test -d "$(dirname "$TMP_FILE")" || echo "[agenix] WARNING: $(dirname "$TMP_FILE") does not exist!"
-      LANG=${
-        config.i18n.defaultLocale or "C"
-      } ${ageBin} --decrypt "''${IDENTITIES[@]}" -o "$TMP_FILE" "${secretType.file}"
-    )
-    chmod ${secretType.mode} "$TMP_FILE"
-    mv -f "$TMP_FILE" "$_truePath"
-
-    ${optionalString secretType.symlink ''
-      [ "${secretType.path}" != "${cfg.secretsDir}/${secretType.name}" ] && ln -sfT "${cfg.secretsDir}/${secretType.name}" "${secretType.path}"
-    ''}
-  '';
-
-  testIdentities = map (path: ''
-    test -f ${path} || echo '[agenix] WARNING: config.age.identityPaths entry ${path} not present!'
-  '') cfg.identityPaths;
-
-  cleanupAndLink = ''
-    _agenix_generation="$(basename "$(readlink ${cfg.secretsDir})" || echo 0)"
-    (( ++_agenix_generation ))
-    echo "[agenix] symlinking new secrets to ${cfg.secretsDir} (generation $_agenix_generation)..."
-    ln -sfT "${cfg.secretsMountPoint}/$_agenix_generation" ${cfg.secretsDir}
-
-    (( _agenix_generation > 1 )) && {
-    echo "[agenix] removing old secrets (generation $(( _agenix_generation - 1 )))..."
-    rm -rf "${cfg.secretsMountPoint}/$(( _agenix_generation - 1 ))"
-    }
-  '';
-
-  installSecrets = builtins.concatStringsSep "\n" (
-    [ "echo '[agenix] decrypting secrets...'" ]
-    ++ testIdentities
-    ++ (map installSecret (builtins.attrValues cfg.secrets))
-    ++ [ cleanupAndLink ]
-  );
-
-  chownSecret = secretType: ''
-    ${setTruePath secretType}
-    chown ${secretType.owner}:${secretType.group} "$_truePath"
-  '';
-
-  chownSecrets = builtins.concatStringsSep "\n" (
-    [ "echo '[agenix] chowning...'" ]
-    ++ [ chownMountPoint ]
-    ++ (map chownSecret (builtins.attrValues cfg.secrets))
-  );
-
-  secretType = types.submodule (
-    { config, ... }:
-    {
-      options = {
-        name = mkOption {
-          type = types.str;
-          default = config._module.args.name;
-          defaultText = literalExpression "config._module.args.name";
-          description = ''
-            Name of the file used in {option}`age.secretsDir`
-          '';
-        };
-        file = mkOption {
-          type = types.path;
-          description = ''
-            Age file the secret is loaded from.
-          '';
-        };
-        path = mkOption {
-          type = types.str;
-          default = "${cfg.secretsDir}/${config.name}";
-          defaultText = literalExpression ''
-            "''${cfg.secretsDir}/''${config.name}"
-          '';
-          description = ''
-            Path where the decrypted secret is installed.
-          '';
-        };
-        mode = mkOption {
-          type = types.str;
-          default = "0400";
-          description = ''
-            Permissions mode of the decrypted secret in a format understood by chmod.
-          '';
-        };
-        owner = mkOption {
-          type = types.str;
-          default = "0";
-          description = ''
-            User of the decrypted secret.
-          '';
-        };
-        group = mkOption {
-          type = types.str;
-          default = users.${config.owner}.group or "0";
-          defaultText = literalExpression ''
-            users.''${config.owner}.group or "0"
-          '';
-          description = ''
-            Group of the decrypted secret.
-          '';
-        };
-        symlink = mkEnableOption "symlinking secrets to their destination" // {
-          default = true;
-        };
-      };
-    }
-  );
-in
-{
-  imports = [
-    (mkRenamedOptionModule [ "age" "sshKeyPaths" ] [ "age" "identityPaths" ])
-  ];
-
-  options.age = {
-    ageBin = mkOption {
-      type = types.str;
-      default = "${pkgs.age}/bin/age";
-      defaultText = literalExpression ''
-        "''${pkgs.age}/bin/age"
-      '';
-      description = ''
-        The age executable to use.
-      '';
-    };
-    secrets = mkOption {
-      type = types.attrsOf secretType;
-      default = { };
-      description = ''
-        Attrset of secrets.
-      '';
-    };
-    secretsDir = mkOption {
-      type = types.path;
-      default = "/run/agenix";
-      description = ''
-        Folder where secrets are symlinked to
-      '';
-    };
-    secretsMountPoint = mkOption {
-      type =
-        types.addCheck types.str (
-          s:
-          (builtins.match "[ \t\n]*" s) == null # non-empty
-          && (builtins.match ".+/" s) == null
-        ) # without trailing slash
-        // {
-          description = "${types.str.description} (with check: non-empty without trailing slash)";
-        };
-      default = "/run/agenix.d";
-      description = ''
-        Where secrets are created before they are symlinked to {option}`age.secretsDir`
-      '';
-    };
-    identityPaths = mkOption {
-      type = types.listOf types.path;
-      default =
-        if isDarwin then
-          [
-            "/etc/ssh/ssh_host_ed25519_key"
-            "/etc/ssh/ssh_host_rsa_key"
-          ]
-        else if (config.services.openssh.enable or false) then
-          map (e: e.path) (
-            lib.filter (e: e.type == "rsa" || e.type == "ed25519") config.services.openssh.hostKeys
-          )
-        else
-          [ ];
-      defaultText = literalExpression ''
-        if isDarwin
-        then [
-          "/etc/ssh/ssh_host_ed25519_key"
-          "/etc/ssh/ssh_host_rsa_key"
-        ]
-        else if (config.services.openssh.enable or false)
-        then map (e: e.path) (lib.filter (e: e.type == "rsa" || e.type == "ed25519") config.services.openssh.hostKeys)
-        else [];
-      '';
-      description = ''
-        Path to SSH keys to be used as identities in age decryption.
-      '';
-    };
-  };
-
-  config = mkIf (cfg.secrets != { }) (mkMerge [
-    {
-      assertions = [
-        {
-          assertion = cfg.identityPaths != [ ];
-          message = "age.identityPaths must be set, for example by enabling openssh.";
-        }
-      ];
-    }
-    (optionalAttrs (!isDarwin) {
-      # When using sysusers we no longer be started as an activation script
-      # because those are started in initrd while sysusers is started later.
-      systemd.services.agenix-install-secrets = mkIf sysusersEnabled {
-        wantedBy = [ "sysinit.target" ];
-        after = [ "systemd-sysusers.service" ];
-        unitConfig.DefaultDependencies = "no";
-
-        path = [ pkgs.mount ];
-        serviceConfig = {
-          Type = "oneshot";
-          ExecStart = pkgs.writeShellScript "agenix-install" (concatLines [
-            newGeneration
-            installSecrets
-            chownSecrets
-          ]);
-          RemainAfterExit = true;
-        };
-      };
-
-      # Create a new directory full of secrets for symlinking (this helps
-      # ensure removed secrets are actually removed, or at least become
-      # invalid symlinks).
-      system.activationScripts = mkIf (!sysusersEnabled) {
-        agenixNewGeneration = {
-          text = newGeneration;
-          deps = [
-            "specialfs"
-          ];
-        };
-
-        agenixInstall = {
-          text = installSecrets;
-          deps = [
-            "agenixNewGeneration"
-            "specialfs"
-          ];
-        };
-
-        # So user passwords can be encrypted.
-        users.deps = [ "agenixInstall" ];
-
-        # Change ownership and group after users and groups are made.
-        agenixChown = {
-          text = chownSecrets;
-          deps = [
-            "users"
-            "groups"
-          ];
-        };
-
-        # So other activation scripts can depend on agenix being done.
-        agenix = {
-          text = "";
-          deps = [ "agenixChown" ];
-        };
-      };
-    })
-
-    (optionalAttrs isDarwin {
-      launchd.daemons.activate-agenix = {
-        script = ''
-          set -e
-          set -o pipefail
-          export PATH="${pkgs.gnugrep}/bin:${pkgs.coreutils}/bin:@out@/sw/bin:/usr/bin:/bin:/usr/sbin:/sbin"
-          ${newGeneration}
-          ${installSecrets}
-          ${chownSecrets}
-          exit 0
-        '';
-        serviceConfig = {
-          RunAtLoad = true;
-          KeepAlive.SuccessfulExit = false;
-        };
-      };
-    })
-  ]);
-}

m/module/debuginfod.nix

@@ -1,10 +1,3 @@
 {
-  services.nixseparatedebuginfod2 = {
+  services.nixseparatedebuginfod.enable = true;
-    enable = true;
-    substituters = [
-      "local:"
-      "https://cache.nixos.org"
-      "http://hut/cache"
-    ];
-  };
 }

m/module/slurm-client.nix

@@ -1,4 +1,4 @@
-{ lib, pkgs, ... }:
+{ lib, ... }:
 
 {
   imports = [
@@ -21,20 +21,4 @@
   };
 
   services.slurm.client.enable = true;
-
-  # Only allow SSH connections from users who have a SLURM allocation
-  # See: https://slurm.schedmd.com/pam_slurm_adopt.html
-  security.pam.services.sshd.rules.account.slurm = {
-    control = "required";
-    enable = true;
-    modulePath = "${pkgs.slurm}/lib/security/pam_slurm_adopt.so";
-    args = [ "log_level=debug5" ];
-    order = 999999; # Make it last one
-  };
-
-  # Disable systemd session (pam_systemd.so) as it will conflict with the
-  # pam_slurm_adopt.so module. What happens is that the shell is first adopted
-  # into the slurmstepd task and then into the systemd session, which is not
-  # what we want, otherwise it will linger even if all jobs are gone.
-  security.pam.services.sshd.startSession = lib.mkForce false;
 }

m/module/slurm-common.nix

@@ -1,6 +1,31 @@
 { config, pkgs, ... }:
 
-{
+let
+  suspendProgram = pkgs.writeShellScript "suspend.sh" ''
+    exec 1>>/var/log/power_save.log 2>>/var/log/power_save.log
+    set -x
+    export "PATH=/run/current-system/sw/bin:$PATH"
+    echo "$(date) Suspend invoked $0 $*" >> /var/log/power_save.log
+    hosts=$(scontrol show hostnames $1)
+    for host in $hosts; do
+      echo Shutting down host: $host
+      ipmitool -I lanplus -H ''${host}-ipmi -P "" -U "" chassis power off
+    done
+  '';
+
+  resumeProgram = pkgs.writeShellScript "resume.sh" ''
+    exec 1>>/var/log/power_save.log 2>>/var/log/power_save.log
+    set -x
+    export "PATH=/run/current-system/sw/bin:$PATH"
+    echo "$(date) Suspend invoked $0 $*" >> /var/log/power_save.log
+    hosts=$(scontrol show hostnames $1)
+    for host in $hosts; do
+      echo Starting host: $host
+      ipmitool -I lanplus -H ''${host}-ipmi -P "" -U "" chassis power on
+    done
+  '';
+
+in {
   services.slurm = {
     controlMachine = "apex";
     clusterName = "jungle";
@@ -34,6 +59,16 @@
       # the resources. Use the task/cgroup plugin to enable process containment.
       TaskPlugin=task/affinity,task/cgroup
 
+      # Power off unused nodes until they are requested
+      SuspendProgram=${suspendProgram}
+      SuspendTimeout=60
+      ResumeProgram=${resumeProgram}
+      ResumeTimeout=300
+      SuspendExcNodes=fox
+
+      # Turn the nodes off after 1 hour of inactivity
+      SuspendTime=3600
+
       # Reduce port range so we can allow only this range in the firewall
       SrunPortRange=60000-61000
 
@@ -51,7 +86,9 @@
       # when a task runs (srun) so we can ssh early.
       PrologFlags=Alloc,Contain,X11
 
-      LaunchParameters=use_interactive_step
+      # LaunchParameters=ulimit_pam_adopt will set RLIMIT_RSS in processes
+      # adopted by the external step, similar to tasks running in regular steps
+      # LaunchParameters=ulimit_pam_adopt
       SlurmdDebug=debug5
       #DebugFlags=Protocol,Cgroup
     '';

m/tent/nginx.nix

@@ -4,8 +4,8 @@ let
     name = "jungle-web";
     src = pkgs.fetchgit {
       url = "https://jungle.bsc.es/git/rarias/jungle-website.git";
-      rev = "52abaf4d71652a9ef77a0b098db14ca33bffff4c";
+      rev = "739bf0175a7f05380fe7ad7023ff1d60db1710e1";
-      hash = "sha256-/ul9GazbOrOkmlvSgDz/+2W+V+ir5725Y7mVLc3rb0M=";
+      hash = "sha256-ea5DzhYTzZ9TmqD+x95rdNdLbxPnBluqlYH2NmBYmc4=";
     };
     buildInputs = [ pkgs.hugo ];
     buildPhase = ''

overlay.nix

@@ -7,7 +7,6 @@ let
   callPackage = final.callPackage;
 
   bscPkgs = {
-    agenix = prev.callPackage ./pkgs/agenix/default.nix { };
     amd-uprof = prev.callPackage ./pkgs/amd-uprof/default.nix { };
     bench6 = callPackage ./pkgs/bench6/default.nix { };
     bigotes = callPackage ./pkgs/bigotes/default.nix { };
@@ -34,15 +33,13 @@ let
       amd-uprof-driver = _prev.callPackage ./pkgs/amd-uprof/driver.nix { };
     });
     lmbench = callPackage ./pkgs/lmbench/default.nix { };
-    # Broken and unmantained
+    mcxx = callPackage ./pkgs/mcxx/default.nix { };
-    # mcxx = callPackage ./pkgs/mcxx/default.nix { };
     meteocat-exporter = prev.callPackage ./pkgs/meteocat-exporter/default.nix { };
     mpi = final.mpich; # Set MPICH as default
     mpich = callPackage ./pkgs/mpich/default.nix { mpich = prev.mpich; };
     nanos6 = callPackage ./pkgs/nanos6/default.nix { };
     nanos6Debug = final.nanos6.override { enableDebug = true; };
     nixtools = callPackage ./pkgs/nixtools/default.nix { };
-    nixgen = callPackage ./pkgs/nixgen/default.nix { };
     # Broken because of pkgsStatic.libcap
     # See: https://github.com/NixOS/nixpkgs/pull/268791
     #nix-wrap = callPackage ./pkgs/nix-wrap/default.nix { };
@@ -58,7 +55,6 @@ let
     prometheus-slurm-exporter = prev.callPackage ./pkgs/slurm-exporter/default.nix { };
     #pscom = callPackage ./pkgs/parastation/pscom.nix { }; # Unmaintaned
     #psmpi = callPackage ./pkgs/parastation/psmpi.nix { }; # Unmaintaned
-    slurm = import ./pkgs/slurm/default.nix { slurm = prev.slurm; };
     sonar = callPackage ./pkgs/sonar/default.nix { };
     stdenvClangOmpss2 = final.stdenv.override { cc = final.clangOmpss2; allowedRequisites = null; };
     stdenvClangOmpss2Nanos6 = final.stdenv.override { cc = final.clangOmpss2Nanos6; allowedRequisites = null; };
@@ -73,7 +69,7 @@ let
   };
 
   tests = rec {
-    hwloc = callPackage ./test/bugs/hwloc.nix { };
+    #hwloc = callPackage ./test/bugs/hwloc.nix { }; # Broken, no /sys
     #sigsegv = callPackage ./test/reproducers/sigsegv.nix { };
     hello-c = callPackage ./test/compilers/hello-c.nix { };
     hello-cpp = callPackage ./test/compilers/hello-cpp.nix { };
@@ -114,20 +110,12 @@ let
     };
   };
 
-  # For now, only build toplevel packages in CI/Hydra
+  pkgs = filterAttrs (_: isDerivation) bscPkgs;
-  pkgsTopLevel = filterAttrs (_: isDerivation) bscPkgs;
 
-  # Native build in that platform doesn't imply cross build works
+  crossTargets = [ "riscv64" ];
-  canCrossCompile = platform: default: pkg:
+  cross = prev.lib.genAttrs crossTargets (target:
-    (isDerivation pkg) &&
+    final.pkgsCross.${target}.bsc-ci.pkgs
-    # If meta.cross is undefined, use default
+  );
-    (pkg.meta.cross or default) &&
-    (meta.availableOn final.pkgsCross.${platform}.stdenv.hostPlatform pkg);
-
-  # For now only RISC-V
-  crossSet = genAttrs [ "riscv64" ] (platform:
-    filterAttrs (_: canCrossCompile platform true)
-      final.pkgsCross.${platform}.bsc.pkgsTopLevel);
 
   buildList = name: paths:
     final.runCommandLocal name { } ''
@@ -141,38 +129,22 @@ let
       printf '%s\n' $deps >$out
     '';
 
-  pkgsList = buildList "ci-pkgs" (builtins.attrValues pkgsTopLevel);
+  crossList = builtins.mapAttrs (t: v: buildList t (builtins.attrValues v)) cross;
-  testsList = buildList "ci-tests" (collect isDerivation tests);
+
-  allList = buildList' "ci-all" [ pkgsList testsList ];
+  pkgsList = buildList "ci-pkgs" (builtins.attrValues pkgs);
-  # For now only RISC-V
+  testList = buildList "ci-tests" (collect isDerivation tests);
-  crossList = buildList "ci-cross"
+
-    (filter
+  all = buildList' "ci-all" [ pkgsList testList ];
-      (canCrossCompile "riscv64" false) # opt-in (pkgs with: meta.cross = true)
-        (builtins.attrValues crossSet.riscv64));
 
 in bscPkgs // {
-
+  # Prevent accidental usage of bsc attribute
-  lib = prev.lib // {
+  bsc = throw "the bsc attribute is deprecated, packages are now in the root";
-    maintainers = prev.lib.maintainers // {
-      bsc = import ./pkgs/maintainers.nix;
-    };
-  };
-
-  # Prevent accidental usage of bsc-ci attribute
-  bsc-ci = throw "the bsc-ci attribute is deprecated, use bsc.ci";
 
   # Internal for our CI tests
-  bsc = {
+  bsc-ci = {
-    # CI targets for nix build
+    inherit pkgs pkgsList;
-    ci = { pkgs = pkgsList; tests = testsList; all = allList; cross = crossList; };
+    inherit tests testList;
-
+    inherit cross crossList;
-    # Direct access to package sets
+    inherit all;
-    tests = tests;
-    pkgs = bscPkgs;
-    pkgsTopLevel = pkgsTopLevel;
-    cross = crossSet;
-
-    # Hydra uses attribute sets of pkgs
-    hydraJobs = { tests = tests; pkgs = pkgsTopLevel; cross = crossSet; };
   };
 }

pkgs/agenix/agenix.sh

@@ -1,212 +0,0 @@
-#!/usr/bin/env bash
-set -Eeuo pipefail
-
-PACKAGE="agenix"
-
-function show_help () {
-  echo "$PACKAGE - edit and rekey age secret files"
-  echo " "
-  echo "$PACKAGE -e FILE [-i PRIVATE_KEY]"
-  echo "$PACKAGE -r [-i PRIVATE_KEY]"
-  echo ' '
-  echo 'options:'
-  echo '-h, --help                show help'
-  # shellcheck disable=SC2016
-  echo '-e, --edit FILE           edits FILE using $EDITOR'
-  echo '-r, --rekey               re-encrypts all secrets with specified recipients'
-  echo '-d, --decrypt FILE        decrypts FILE to STDOUT'
-  echo '-i, --identity            identity to use when decrypting'
-  echo '-v, --verbose             verbose output'
-  echo ' '
-  echo 'FILE an age-encrypted file'
-  echo ' '
-  echo 'PRIVATE_KEY a path to a private SSH key used to decrypt file'
-  echo ' '
-  echo 'EDITOR environment variable of editor to use when editing FILE'
-  echo ' '
-  echo 'If STDIN is not interactive, EDITOR will be set to "cp /dev/stdin"'
-  echo ' '
-  echo 'RULES environment variable with path to Nix file specifying recipient public keys.'
-  echo "Defaults to './secrets.nix'"
-  echo ' '
-  echo "agenix version: @version@"
-  echo "age binary path: @ageBin@"
-  echo "age version: $(@ageBin@ --version)"
-}
-
-function warn() {
-  printf '%s\n' "$*" >&2
-}
-
-function err() {
-  warn "$*"
-  exit 1
-}
-
-test $# -eq 0 && (show_help && exit 1)
-
-REKEY=0
-DECRYPT_ONLY=0
-DEFAULT_DECRYPT=(--decrypt)
-
-while test $# -gt 0; do
-  case "$1" in
-    -h|--help)
-      show_help
-      exit 0
-      ;;
-    -e|--edit)
-      shift
-      if test $# -gt 0; then
-        export FILE=$1
-      else
-        echo "no FILE specified"
-        exit 1
-      fi
-      shift
-      ;;
-    -i|--identity)
-      shift
-      if test $# -gt 0; then
-        DEFAULT_DECRYPT+=(--identity "$1")
-      else
-        echo "no PRIVATE_KEY specified"
-        exit 1
-      fi
-      shift
-      ;;
-    -r|--rekey)
-      shift
-      REKEY=1
-      ;;
-    -d|--decrypt)
-      shift
-      DECRYPT_ONLY=1
-      if test $# -gt 0; then
-        export FILE=$1
-      else
-        echo "no FILE specified"
-        exit 1
-      fi
-      shift
-      ;;
-    -v|--verbose)
-      shift
-      set -x
-      ;;
-    *)
-      show_help
-      exit 1
-      ;;
-  esac
-done
-
-RULES=${RULES:-./secrets.nix}
-function cleanup {
-    if [ -n "${CLEARTEXT_DIR+x}" ]
-    then
-        rm -rf -- "$CLEARTEXT_DIR"
-    fi
-    if [ -n "${REENCRYPTED_DIR+x}" ]
-    then
-        rm -rf -- "$REENCRYPTED_DIR"
-    fi
-}
-trap "cleanup" 0 2 3 15
-
-function keys {
-    (@nixInstantiate@ --json --eval --strict -E "(let rules = import $RULES; in rules.\"$1\".publicKeys)" | @jqBin@ -r .[]) || exit 1
-}
-
-function armor {
-    (@nixInstantiate@ --json --eval --strict -E "(let rules = import $RULES; in (builtins.hasAttr \"armor\" rules.\"$1\" && rules.\"$1\".armor))") || exit 1
-}
-
-function decrypt {
-    FILE=$1
-    KEYS=$2
-    if [ -z "$KEYS" ]
-    then
-        err "There is no rule for $FILE in $RULES."
-    fi
-
-    if [ -f "$FILE" ]
-    then
-        DECRYPT=("${DEFAULT_DECRYPT[@]}")
-        if [[ "${DECRYPT[*]}" != *"--identity"* ]]; then
-            if [ -f "$HOME/.ssh/id_rsa" ]; then
-                DECRYPT+=(--identity "$HOME/.ssh/id_rsa")
-            fi
-            if [ -f "$HOME/.ssh/id_ed25519" ]; then
-                DECRYPT+=(--identity "$HOME/.ssh/id_ed25519")
-            fi
-        fi
-        if [[ "${DECRYPT[*]}" != *"--identity"* ]]; then
-          err "No identity found to decrypt $FILE. Try adding an SSH key at $HOME/.ssh/id_rsa or $HOME/.ssh/id_ed25519 or using the --identity flag to specify a file."
-        fi
-
-        @ageBin@ "${DECRYPT[@]}" -- "$FILE" || exit 1
-    fi
-}
-
-function edit {
-    FILE=$1
-    KEYS=$(keys "$FILE") || exit 1
-    ARMOR=$(armor "$FILE") || exit 1
-
-    CLEARTEXT_DIR=$(@mktempBin@ -d)
-    CLEARTEXT_FILE="$CLEARTEXT_DIR/$(basename -- "$FILE")"
-    DEFAULT_DECRYPT+=(-o "$CLEARTEXT_FILE")
-
-    decrypt "$FILE" "$KEYS" || exit 1
-
-    [ ! -f "$CLEARTEXT_FILE" ] || cp -- "$CLEARTEXT_FILE" "$CLEARTEXT_FILE.before"
-
-    [ -t 0 ] || EDITOR='cp -- /dev/stdin'
-
-    $EDITOR "$CLEARTEXT_FILE"
-
-    if [ ! -f "$CLEARTEXT_FILE" ]
-    then
-      warn "$FILE wasn't created."
-      return
-    fi
-    [ -f "$FILE" ] && [ "$EDITOR" != ":" ] && @diffBin@ -q -- "$CLEARTEXT_FILE.before" "$CLEARTEXT_FILE" && warn "$FILE wasn't changed, skipping re-encryption." && return
-
-    ENCRYPT=()
-    if [[ "$ARMOR" == "true" ]]; then
-        ENCRYPT+=(--armor)
-    fi
-    while IFS= read -r key
-    do
-        if [ -n "$key" ]; then
-            ENCRYPT+=(--recipient "$key")
-        fi
-    done <<< "$KEYS"
-
-    REENCRYPTED_DIR=$(@mktempBin@ -d)
-    REENCRYPTED_FILE="$REENCRYPTED_DIR/$(basename -- "$FILE")"
-
-    ENCRYPT+=(-o "$REENCRYPTED_FILE")
-
-    @ageBin@ "${ENCRYPT[@]}" <"$CLEARTEXT_FILE" || exit 1
-
-    mkdir -p -- "$(dirname -- "$FILE")"
-
-    mv -f -- "$REENCRYPTED_FILE" "$FILE"
-}
-
-function rekey {
-    FILES=$( (@nixInstantiate@ --json --eval -E "(let rules = import $RULES; in builtins.attrNames rules)"  | @jqBin@ -r .[]) || exit 1)
-
-    for FILE in $FILES
-    do
-        warn "rekeying $FILE..."
-        EDITOR=: edit "$FILE"
-        cleanup
-    done
-}
-
-[ $REKEY -eq 1 ] && rekey && exit 0
-[ $DECRYPT_ONLY -eq 1 ] && DEFAULT_DECRYPT+=("-o" "-") && decrypt "${FILE}" "$(keys "$FILE")" && exit 0
-edit "$FILE" && cleanup && exit 0

pkgs/agenix/default.nix

@@ -1,66 +0,0 @@
-{
-  lib,
-  stdenv,
-  age,
-  jq,
-  nix,
-  mktemp,
-  diffutils,
-  replaceVars,
-  ageBin ? "${age}/bin/age",
-  shellcheck,
-}:
-let
-  bin = "${placeholder "out"}/bin/agenix";
-in
-stdenv.mkDerivation rec {
-  pname = "agenix";
-  version = "0.15.0";
-  src = replaceVars ./agenix.sh {
-    inherit ageBin version;
-    jqBin = "${jq}/bin/jq";
-    nixInstantiate = "${nix}/bin/nix-instantiate";
-    mktempBin = "${mktemp}/bin/mktemp";
-    diffBin = "${diffutils}/bin/diff";
-  };
-  dontUnpack = true;
-  doInstallCheck = true;
-  installCheckInputs = [ shellcheck ];
-  postInstallCheck = ''
-    shellcheck ${bin}
-    ${bin} -h | grep ${version}
-
-    test_tmp=$(mktemp -d 2>/dev/null || mktemp -d -t 'mytmpdir')
-    export HOME="$test_tmp/home"
-    export NIX_STORE_DIR="$test_tmp/nix/store"
-    export NIX_STATE_DIR="$test_tmp/nix/var"
-    mkdir -p "$HOME" "$NIX_STORE_DIR" "$NIX_STATE_DIR"
-    function cleanup {
-      rm -rf "$test_tmp"
-    }
-    trap "cleanup" 0 2 3 15
-
-    mkdir -p $HOME/.ssh
-    cp -r "${./example}" $HOME/secrets
-    chmod -R u+rw $HOME/secrets
-    (
-    umask u=rw,g=r,o=r
-    cp ${./example_keys/user1.pub} $HOME/.ssh/id_ed25519.pub
-    chown $UID $HOME/.ssh/id_ed25519.pub
-    )
-    (
-    umask u=rw,g=,o=
-    cp ${./example_keys/user1} $HOME/.ssh/id_ed25519
-    chown $UID $HOME/.ssh/id_ed25519
-    )
-
-    cd $HOME/secrets
-    test $(${bin} -d secret1.age) = "hello"
-  '';
-
-  installPhase = ''
-    install -D $src ${bin}
-  '';
-
-  meta.description = "age-encrypted secrets for NixOS";
-}

pkgs/agenix/example/-leading-hyphen-filename.age

@@ -1,7 +0,0 @@
-age-encryption.org/v1
--> ssh-ed25519 V3XmEA zirqdzZZ1E+sedBn7fbEHq4ntLEkokZ4GctarBBOHXY
-Rvs5YHaAUeCZyNwPedubPcHClWYIuXXWA5zadXPWY6w
--> ssh-ed25519 KLPP8w BVp4rDkOYSQyn8oVeHFeinSqW+pdVtxBF9+5VM1yORY
-bMwppAi8Nhz0328taU4AzUkTVyWtSLvFZG6c5W/Fs78
---- xCbqLhXAcOziO2wmbjTiSQfZvt5Rlsc4SCvF+iEzpQA
-<EFBFBD>KB<EFBFBD><EFBFBD>/<2F>Z<><5A>r<EFBFBD>%
<01><>4<EFBFBD><34><EFBFBD>Mq5<71><35>_<EFBFBD><5F>ݒ<><DD92><EFBFBD><EFBFBD><EFBFBD>11ܨqM;& <20><>Lr<4C><72><EFBFBD>f<EFBFBD><66><EFBFBD>]>N

pkgs/agenix/example/armored-secret.age

@@ -1,7 +0,0 @@
------BEGIN AGE ENCRYPTED FILE-----
-YWdlLWVuY3J5cHRpb24ub3JnL3YxCi0+IHNzaC1lZDI1NTE5IFYzWG1FQSBpZkZW
-aFpLNnJxc0VUMHRmZ2dZS0pjMGVENnR3OHd5K0RiT1RjRUhibFZBCnN5UG5vUjA3
-SXpsNGtiVUw4T0tIVFo5Wkk5QS9NQlBndzVvektiQ0ozc0kKLS0tIGxyY1Q4dEZ1
-VGZEanJyTFNta2JNRmpZb2FnK2JyS1hSVml1UGdMNWZKQXMKYla+wTXcRedyZoEb
-LVWaSx49WoUTU0KBPJg9RArxaeC23GoCDzR/aM/1DvYU
------END AGE ENCRYPTED FILE-----

pkgs/agenix/example/passwordfile-user1.age

@@ -1,9 +0,0 @@
-age-encryption.org/v1
--> ssh-ed25519 KLPP8w s1DYZRlZuSsyhmZCF1lFB+E9vB8bZ/+ZhBRlx8nprwE
-nmYVCsVBrX2CFXXPU+D+bbkkIe/foofp+xoUrg9DHZw
--> ssh-ed25519 V3XmEA Pwv3oCwcY0DX8rY48UNfsj9RumWsn4dbgorYHCwObgI
-FKxRYkL3JHtJxUwymWDF0rAtJ33BivDI6IfPsfumM90
--> V'v(/u$-grease em/Vgf 2qDuk
-7I3iiQLPGi1COML9u/JeYkr7EqbSLoU
---- 57WJRigUGtmcObrssS3s4PvmR8wgh1AOC/ijJn1s3xI
-<EFBFBD>'K<>ƷY&<26>7G<37>O<EFBFBD><4F>Fj
<13>k<EFBFBD>X<EFBFBD><58>BnuJ<75><4A>:9<>(<><7F><EFBFBD>X<EFBFBD>#<23>A<EFBFBD><41><EFBFBD><EFBFBD>ڧj<DAA7>,<02>_<17><><EFBFBD>?<3F>Z<EFBFBD><17>v<EFBFBD><76>V<EFBFBD>96]oks~%<25>c	<04>e^C<>%JQ5<51><H<>z}<7D>C<EFBFBD>,<2C>p<EFBFBD><70>*!W<><57><EFBFBD>A<EFBFBD><41><EFBFBD>҅dC<15>K)<10><>-<2D>y

pkgs/agenix/example/secret2.age

@@ -1,5 +0,0 @@
-age-encryption.org/v1
--> ssh-ed25519 V3XmEA OB4+1FbPhQ3r6iGksM7peWX5it8NClpXIq/o5nnP7GA
-FmHVUj+A5i5+bDFgySQskmlvynnosJiWUTJmBRiNA9I
---- tP+3mFVtd7ogVu1Lkboh55zoi5a77Ht08Uc/QuIviv4
-<EFBFBD><EFBFBD>X<EFBFBD>{<7B><>O<EFBFBD><4F><1F><04>tMXx<58>vӪ(<28>I<EFBFBD>myP<79><50><EFBFBD><EFBFBD>+3<>S3i

pkgs/agenix/example/secrets.nix

@@ -1,23 +0,0 @@
-let
-  user1 = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIL0idNvgGiucWgup/mP78zyC23uFjYq0evcWdjGQUaBH";
-  system1 = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIPJDyIr/FSz1cJdcoW69R+NrWzwGK/+3gJpqD1t8L2zE";
-in
-{
-  "secret1.age".publicKeys = [
-    user1
-    system1
-  ];
-  "secret2.age".publicKeys = [ user1 ];
-  "passwordfile-user1.age".publicKeys = [
-    user1
-    system1
-  ];
-  "-leading-hyphen-filename.age".publicKeys = [
-    user1
-    system1
-  ];
-  "armored-secret.age" = {
-    publicKeys = [ user1 ];
-    armor = true;
-  };
-}

pkgs/agenix/example_keys/system1

@@ -1,7 +0,0 @@
------BEGIN OPENSSH PRIVATE KEY-----
-b3BlbnNzaC1rZXktdjEAAAAABG5vbmUAAAAEbm9uZQAAAAAAAAABAAAAMwAAAAtzc2gtZW
-QyNTUxOQAAACDyQ8iK/xUs9XCXXKFuvUfja1s8Biv/t4Caag9bfC9sxAAAAJA3yvCWN8rw
-lgAAAAtzc2gtZWQyNTUxOQAAACDyQ8iK/xUs9XCXXKFuvUfja1s8Biv/t4Caag9bfC9sxA
-AAAEA+J2V6AG1NriAIvnNKRauIEh1JE9HSdhvKJ68a5Fm0w/JDyIr/FSz1cJdcoW69R+Nr
-WzwGK/+3gJpqD1t8L2zEAAAADHJ5YW50bUBob21lMQE=
------END OPENSSH PRIVATE KEY-----

pkgs/agenix/example_keys/system1.pub

@@ -1 +0,0 @@
-ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIPJDyIr/FSz1cJdcoW69R+NrWzwGK/+3gJpqD1t8L2zE

pkgs/agenix/example_keys/user1

@@ -1,7 +0,0 @@
------BEGIN OPENSSH PRIVATE KEY-----
-b3BlbnNzaC1rZXktdjEAAAAABG5vbmUAAAAEbm9uZQAAAAAAAAABAAAAMwAAAAtzc2gtZW
-QyNTUxOQAAACC9InTb4BornFoLqf5j+/M8gtt7hY2KtHr3FnYxkFGgRwAAAJC2JJ8htiSf
-IQAAAAtzc2gtZWQyNTUxOQAAACC9InTb4BornFoLqf5j+/M8gtt7hY2KtHr3FnYxkFGgRw
-AAAEDxt5gC/s53IxiKAjfZJVCCcFIsdeERdIgbYhLO719+Kb0idNvgGiucWgup/mP78zyC
-23uFjYq0evcWdjGQUaBHAAAADHJ5YW50bUBob21lMQE=
------END OPENSSH PRIVATE KEY-----

pkgs/agenix/example_keys/user1.pub

@@ -1 +0,0 @@
-ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIL0idNvgGiucWgup/mP78zyC23uFjYq0evcWdjGQUaBH

pkgs/agenix/update.sh

@@ -1,23 +0,0 @@
-#!/bin/sh
-
-set -e
-
-# All operations are done relative to root
-GITROOT=$(git rev-parse --show-toplevel)
-cd "$GITROOT"
-
-REVISION=${1:-main}
-
-TMPCLONE=$(mktemp -d)
-trap "rm -rf ${TMPCLONE}" EXIT
-
-git clone https://github.com/ryantm/agenix.git --revision="$REVISION" "$TMPCLONE" --depth=1
-
-cp "${TMPCLONE}/pkgs/agenix.sh" pkgs/agenix/agenix.sh
-cp "${TMPCLONE}/pkgs/agenix.nix" pkgs/agenix/default.nix
-sed -i 's#../example#./example#' pkgs/agenix/default.nix
-
-cp "${TMPCLONE}/example/"* pkgs/agenix/example/
-cp "${TMPCLONE}/example_keys/"* pkgs/agenix/example_keys/
-
-cp "${TMPCLONE}/modules/age.nix" m/module/agenix.nix

pkgs/amd-uprof/default.nix

@@ -86,13 +86,4 @@ in
       patchelf --add-needed libnuma.so $out/bin/AMDuProfPcm
       set +x
     '';
-
-    meta = {
-      description = "Performance analysis tool-suite for x86 based applications";
-      homepage = "https://www.amd.com/es/developer/uprof.html";
-      platforms = [ "x86_64-linux" ];
-      license = lib.licenses.unfree;
-      maintainers = with lib.maintainers.bsc; [ rarias varcila ];
-    };
-
   }

pkgs/amd-uprof/driver.nix

@@ -19,7 +19,7 @@ in stdenv.mkDerivation {
   '';
   hardeningDisable = [ "pic" "format" ];
   nativeBuildInputs = kernel.moduleBuildDependencies;
-  patches = [ ./makefile.patch ./hrtimer.patch ./remove-wr-rdmsrq.patch ];
+  patches = [ ./makefile.patch ./hrtimer.patch ];
   makeFlags = [
     "KERNEL_VERSION=${kernel.modDirVersion}"
     "KERNEL_DIR=${kernel.dev}/lib/modules/${kernel.modDirVersion}/build"
@@ -29,7 +29,5 @@ in stdenv.mkDerivation {
     description = "AMD Power Profiler Driver";
     homepage = "https://www.amd.com/es/developer/uprof.html";
     platforms = lib.platforms.linux;
-    license = lib.licenses.unfree;
-    maintainers = with lib.maintainers.bsc; [ rarias varcila ];
   };
 }

pkgs/amd-uprof/remove-wr-rdmsrq.patch

@@ -1,20 +0,0 @@
-diff --git a/inc/PwrProfAsm.h b/inc/PwrProfAsm.h
-index d77770a..c93a0e9 100644
---- a/inc/PwrProfAsm.h
-+++ b/inc/PwrProfAsm.h
-@@ -347,6 +347,7 @@
- 
- #endif
- 
-+/*
- #define rdmsrq(msr,val1,val2,val3,val4) ({ \
-         __asm__ __volatile__( \
-                               "rdmsr\n" \
-@@ -362,6 +363,7 @@
-                               :"c"(msr), "a"(val1), "d"(val2), "S"(val3), "D"(val4) \
-                             ); \
-     })
-+*/
- 
- #define rdmsrpw(msr,val1,val2,val3,val4) ({ \
-         __asm__ __volatile__( \

pkgs/bench6/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , bigotes
 , cmake
 , clangOmpss2
@@ -59,12 +58,4 @@ stdenv.mkDerivation rec {
   ];
   hardeningDisable = [ "all" ];
   dontStrip = true;
-
-  meta = {
-    homepage = "https://gitlab.pm.bsc.es/rarias/bench6";
-    description = "Set of micro-benchmarks for OmpSs-2 and several mini-apps";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.gpl3Plus;
-  };
 }

pkgs/bigotes/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , fetchFromGitHub
 , cmake
 }:
@@ -15,12 +14,4 @@ stdenv.mkDerivation {
     sha256 = "sha256-ktxM3pXiL8YXSK+/IKWYadijhYXqGoLY6adLk36iigE=";
   };
   nativeBuildInputs = [ cmake ];
-
-  meta = {
-    homepage = "https://github.com/rodarima/bigotes";
-    description = "Versatile benchmark tool";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.gpl3Plus;
-  };
 }

pkgs/cudainfo/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , cudatoolkit
 , cudaPackages
 , autoAddDriverRunpath
@@ -12,7 +11,7 @@ stdenv.mkDerivation (finalAttrs: {
   src = ./.;
   buildInputs = [
     cudatoolkit # Required for nvcc
-    (lib.getOutput "static" cudaPackages.cuda_cudart) # Required for -lcudart_static
+    cudaPackages.cuda_cudart.static # Required for -lcudart_static
     autoAddDriverRunpath
   ];
   installPhase = ''
@@ -41,9 +40,4 @@ stdenv.mkDerivation (finalAttrs: {
     '';
     installPhase = "touch $out";
   };
-
-  meta = {
-    platforms = [ "x86_64-linux" ];
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-  };
 })

pkgs/extrae/default.nix

@@ -20,7 +20,6 @@
 #, python3Packages
 , installShellFiles
 , symlinkJoin
-, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
 }:
 
 let
@@ -88,7 +87,7 @@ stdenv.mkDerivation rec {
       --enable-sampling
       --with-unwind=${libunwind.dev}
       --with-xml-prefix=${libxml2.dev}
-      ${lib.optionalString enablePapi "--with-papi=${papi}"}
+      --with-papi=${papi}
       ${if (mpi != null) then ''--with-mpi=${mpi}''
         else ''--without-mpi''}
       --without-dyninst)
@@ -111,13 +110,4 @@ stdenv.mkDerivation rec {
 #    then [ "--enable-openmp" ]
 #    else []
 #  );
-
-  meta = {
-    homepage = "https://github.com/bsc-performance-tools/extrae";
-    description = "Instrumentation framework to generate execution traces of the most used parallel runtimes";
-    maintainers = [ ];
-    broken = true;
-    platforms = lib.platforms.linux;
-    license = lib.licenses.lgpl21Plus;
-  };
 }

pkgs/gpi-2/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , fetchurl
 , symlinkJoin
 , slurm
@@ -9,6 +8,7 @@
 , automake
 , libtool
 , mpi
+, rsync
 , gfortran
 }:
 
@@ -43,33 +43,13 @@ stdenv.mkDerivation rec {
 
   configureFlags = [
     "--with-infiniband=${rdma-core-all}"
-    "--with-mpi=yes" # fixes mpi detection when cross-compiling
+    "--with-mpi=${mpiAll}"
     "--with-slurm"
     "CFLAGS=-fPIC"
     "CXXFLAGS=-fPIC"
   ];
 
-  nativeBuildInputs = [
+  buildInputs = [ slurm mpiAll rdma-core-all autoconf automake libtool rsync gfortran ];
-    autoconf
-    automake
-    gfortran
-    libtool
-  ];
-
-  buildInputs = [
-    slurm
-    mpiAll
-    rdma-core-all
-  ];
 
   hardeningDisable = [ "all" ];
-
-  meta = {
-    homepage = "https://pm.bsc.es/gitlab/interoperability/extern/GPI-2";
-    description = "GPI-2 extended for supporting Task-Aware GASPI (TAGASPI) library";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.gpl3Plus;
-    cross = false; # infiniband detection does not work
-  };
 }

pkgs/intel-compiler/icc2020.nix

@@ -1,5 +1,4 @@
 { stdenv
-, lib
 , fetchurl
 , rpmextract
 , autoPatchelfHook
@@ -60,12 +59,4 @@ stdenv.mkDerivation rec {
       rm $out/lib/*.dbg
     popd
   '';
-
-  meta = {
-    homepage = "https://www.intel.com/content/www/us/en/developer/tools/overview.html";
-    description = "Intel compiler";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.unfree;
-  };
 }

pkgs/intel-compiler/icc2021.nix

@@ -145,12 +145,4 @@ in
       popd
     '';
 
-    meta = {
-      homepage = "https://www.intel.com/content/www/us/en/developer/tools/overview.html";
-      description = "Intel compiler";
-      maintainers = with lib.maintainers.bsc; [ rarias ];
-      platforms = lib.platforms.linux;
-      license = lib.licenses.unfree;
-    };
-
   }

pkgs/intel-mpi/default.nix

@@ -1,5 +1,4 @@
 { stdenv
-, lib
 , rpmextract
 , gcc
 , zlib
@@ -102,12 +101,4 @@ stdenv.mkDerivation rec {
     patchelf --set-rpath "$out/lib:${rdma-core}/lib:${libpsm2}/lib" $out/lib/libfabric.so
     echo "Patched RPATH in libfabric.so to: $(patchelf --print-rpath $out/lib/libfabric.so)"
   '';
-
-  meta = {
-    homepage = "https://www.intel.com/content/www/us/en/developer/tools/overview.html";
-    description = "Intel MPI";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.unfree;
-  };
 }

pkgs/intel-oneapi/2023.nix

@@ -10,7 +10,7 @@
 , zlib
 , autoPatchelfHook
 , libfabric
-, gcc
+, gcc13
 , wrapCCWith
 }:
 
@@ -26,12 +26,7 @@
 
 let
 
-  meta = {
+  gcc = gcc13;
-    description = "Intel oneapi hpckit package component";
-    homepage = "https://www.intel.com/content/www/us/en/developer/tools/oneapi/hpc-toolkit-download.html";
-    license = lib.licenses.unfree;
-    maintainers = with lib.maintainers.bsc; [ abonerib ];
-  };
 
   v = {
     hpckit   = "2023.1.0";
@@ -66,8 +61,6 @@ let
         dpkg -x $src $out
       done
     '';
-
-    inherit meta;
   };
 
   joinDebs = name: names:
@@ -123,8 +116,6 @@ let
         sed -i "s:I_MPI_SUBSTITUTE_INSTALLDIR:$out:g" "$i"
       done
     '';
-
-    inherit meta;
   };
 
   intel-tbb = stdenv.mkDerivation rec {
@@ -163,8 +154,6 @@ let
         rsync -a lib/intel64/gcc4.8/ $out/lib/
       popd
     '';
-
-    inherit meta;
   };
 
   intel-compiler-shared = stdenv.mkDerivation rec {
@@ -222,8 +211,6 @@ let
         popd
       popd
     '';
-
-    inherit meta;
   };
 
 
@@ -289,8 +276,6 @@ let
         ln -s $out/lib $out/lib_lin
       popd
     '';
-
-    inherit meta;
   };
 
   intel-compiler = stdenv.mkDerivation rec {
@@ -378,8 +363,6 @@ let
         rsync -a documentation/en/man/common/ $out/share/man/
       popd
     '';
-
-    inherit meta;
   };
 
   wrapIntel = { cc, mygcc, extraBuild ? "", extraInstall ? "" }:

pkgs/intel-oneapi/packages.nix

@@ -1,46 +1,19 @@
-{
+{ lib
-  lib,
+, stdenv
-  stdenv,
+, callPackage
-  callPackage,
+, dpkg
-  dpkg,
+, fetchurl
-  fetchurl,
+, recurseIntoAttrs
 
-  sqlite,
+, sqlite
-  elfutils,
+, elfutils
 }:
 
 let
   inherit (builtins)
-    attrNames
+    elem attrNames attrValues concatMap filter fromJSON getAttr groupBy head isNull listToAttrs map mapAttrs readFile replaceStrings splitVersion ;
-    attrValues
-    concatMap
-    elem
-    filter
-    fromJSON
-    getAttr
-    groupBy
-    head
-    isNull
-    listToAttrs
-    map
-    mapAttrs
-    readFile
-    replaceStrings
-    splitVersion
-    ;
   inherit (lib)
-    converge
+    converge findFirst groupBy' hasPrefix optional pipe take toInt toList versionAtLeast versionOlder ;
-    findFirst
-    groupBy'
-    hasPrefix
-    optional
-    pipe
-    take
-    toInt
-    toList
-    versionAtLeast
-    versionOlder
-    ;
 
   aptData = fromJSON (readFile ./packages.json);
 
@@ -59,69 +32,44 @@ let
   #
   # To mitigate this, >= is set to take the latest version with matching major
   # and minor (only revision and patch are allowed to change)
-  compareVersions =
+  compareVersions = got: kind: want:
-    got: kind: want:
     let
       g0 = take 2 (splitVersion got);
       w0 = take 2 (splitVersion want);
-    in
+    in if isNull want then true
-    if isNull want then
+    else if kind == "=" then got == want
-      true
+    else if kind == "<<" then versionOlder got want
-    else if kind == "=" then
+    else if kind == "<=" then versionAtLeast want got
-      got == want
+    else if kind == ">>" then versionOlder want got
-    else if kind == "<<" then
+    else if kind == ">=" then (g0 == w0) && versionAtLeast got want # always match major version
-      versionOlder got want
+    else throw "unknown operation: ${kind}";
-    else if kind == "<=" then
-      versionAtLeast want got
-    else if kind == ">>" then
-      versionOlder want got
-    else if kind == ">=" then
-      (g0 == w0) && versionAtLeast got want # always match major version
-    else
-      throw "unknown operation: ${kind}";
 
-  findMatching =
+  findMatching = { pname, kind, version }:
-    {
-      pname,
-      kind,
-      version,
-    }:
     findFirst (x: pname == x.pname && compareVersions x.version kind version) null aptData;
 
   isIntel = pkg: (hasPrefix "intel-" pkg.pname);
 
-  expandDeps =
+  expandDeps = pkg: (map findMatching (filter isIntel pkg.dependencies)) ++ (optional (pkg.size != 0) pkg);
-    pkg: (map findMatching (filter isIntel pkg.dependencies)) ++ (optional (pkg.size != 0) pkg);
 
   # get the oldest by major version. If they have the same major version, take
   # the newest. This prevents most issues with resolutions
   # versionOlder b a -> true if b is older than a (b `older` a)
-  getNewerInMajor =
+  getNewerInMajor = a: b: let
-    a: b:
+    va = a.version;
-    let
+    vb = b.version;
-      va = a.version;
+    va0 = head (splitVersion va);
-      vb = b.version;
+    vb0 = head (splitVersion vb);
-      va0 = head (splitVersion va);
+  in
-      vb0 = head (splitVersion vb);
+  if isNull a then b
-    in
+  else if va0 != vb0 then
-    if isNull a then
+    if va0 > vb0 then b else a
-      b
+  else if versionOlder vb va then a else b;
-    else if va0 != vb0 then
-      if va0 > vb0 then b else a
-    else if versionOlder vb va then
-      a
-    else
-      b;
   removeDups = l: attrValues (groupBy' getNewerInMajor null (getAttr "provides") l);
 
   _resolveDeps = converge (l: removeDups (concatMap expandDeps l));
-  resolveDeps =
+  resolveDeps = pkg: let deps = _resolveDeps (toList pkg);
-    pkg:
-    let
-      deps = _resolveDeps (toList pkg);
       namedDeps = (map (x: "${x.pname}-${x.version}") deps);
-    in
+    in builtins.traceVerbose (builtins.deepSeq namedDeps namedDeps) deps;
-    builtins.traceVerbose (builtins.deepSeq namedDeps namedDeps) deps;
 
   blacklist = [
     "intel-basekit-env"
@@ -147,53 +95,34 @@ let
   isInBlacklist = pkg: elem pkg.provides blacklist;
   removeBlacklist = filter (e: !(isInBlacklist e));
 
-  dpkgExtractAll =
+  dpkgExtractAll = pname: version: {srcs, deps}: stdenv.mkDerivation {
-    pname: version:
+    inherit pname version srcs;
-    { srcs, deps }:
-    stdenv.mkDerivation {
-      inherit pname version srcs;
 
-      nativeBuildInputs = [ dpkg ];
+    nativeBuildInputs = [ dpkg ];
-      phases = [ "installPhase" ];
+    phases = [ "installPhase" ];
 
-      passthru = { inherit deps; };
+    passthru = { inherit deps; };
 
-      installPhase = ''
+    installPhase = ''
-        mkdir -p $out
+      mkdir -p $out
-        for src in $srcs; do
+      for src in $srcs; do
-          echo "Unpacking $src"
+        echo "Unpacking $src"
-          dpkg -x $src $out
+        dpkg -x $src $out
-        done
+      done
-      '';
+    '';
-    };
+  };
 
   apthost = "https://apt.repos.intel.com/oneapi/";
-  fetchDeb =
+  fetchDeb = p: fetchurl { url = apthost + p.filename; inherit (p) sha256; };
-    p:
-    fetchurl {
-      url = apthost + p.filename;
-      inherit (p) sha256;
-    };
 
-  buildIntel =
+  buildIntel = pkg: pipe pkg [
-    pkg:
+    resolveDeps
-    pipe pkg [
+    removeBlacklist
-      resolveDeps
+    (l: {srcs = map fetchDeb l; deps = l; })
-      removeBlacklist
+    (dpkgExtractAll "${pkg.provides}-extracted" pkg.version)
-      (l: {
+  ];
-        srcs = map fetchDeb l;
-        deps = l;
-      })
-      (dpkgExtractAll "${pkg.provides}-extracted" pkg.version)
-    ];
 
-  findHpcKit =
+  findHpcKit = year: findMatching { pname = "intel-hpckit"; kind = "<<"; version = toString (year+1); };
-    year:
-    findMatching {
-      pname = "intel-hpckit";
-      kind = "<<";
-      version = toString (year + 1);
-    };
   years = map toInt (attrNames components);
 
   patchIntel = callPackage ./patch_intel.nix { };
@@ -259,39 +188,18 @@ let
     };
   };
 
-  replaceDots = replaceStrings [ "." ] [ "_" ];
+  replaceDots = replaceStrings ["."] ["_"];
 
-in
+in recurseIntoAttrs (listToAttrs (map (year: let
-lib.recurseIntoAttrs (
+      year_str = toString year;
-  listToAttrs (
+    in {
-    map (
+      name = "hpckit_${year_str}";
-      year:
+      value = patchIntel {unpatched = buildIntel (findHpcKit year); components = components.${year_str}; };
-      let
+  }) years)) // {
-        year_str = toString year;
-      in
-      {
-        name = "hpckit_${year_str}";
-        value = patchIntel {
-          unpatched = buildIntel (findHpcKit year);
-          components = components.${year_str};
-        };
-      }
-    ) years
-  )
-)
-// {
   apt = pipe aptData [
     (groupBy (p: replaceDots p.provides))
-    (mapAttrs (
+    (mapAttrs (_: l: listToAttrs (map (pkg: { name = replaceDots ("v" + pkg.version); value = pkg; }) l)))
-      _: l:
+  ] ;
-      listToAttrs (
-        map (pkg: {
-          name = replaceDots ("v" + pkg.version);
-          value = pkg;
-        }) l
-      )
-    ))
-  ];
 
   inherit resolveDeps patchIntel buildIntel;
 }

pkgs/intel-oneapi/patch_intel.nix

@@ -1,189 +1,179 @@
-{
+{ stdenvNoCC
-  stdenv,
+, lib
-  stdenvNoCC,
+, symlinkJoin
-  lib,
+, autoPatchelfHook
-  symlinkJoin,
+, wrapCCWith
-  autoPatchelfHook,
+, overrideCC
-  wrapCCWith,
+, gcc13
-  overrideCC,
+, gcc13Stdenv
-  gcc,
+, hwloc
-  hwloc,
+, libelf
-  libelf,
+, libffi_3_3
-  libffi_3_3,
+, libpsm2
-  libpsm2,
+, libuuid
-  libuuid,
+, libxml2
-  libxml2,
+, numactl
-  numactl,
+, ocl-icd
-  ocl-icd,
+, openssl
-  openssl,
+, python3
-  python3,
+, rdma-core
-  rdma-core,
+, ucx
-  ucx,
+, zlib
-  zlib,
+, makeOverridable
+, recurseIntoAttrs
 }:
 
-lib.makeOverridable (
+makeOverridable (
-  {
+{
-    unpatched,
+  unpatched,
-    components ? { },
+  components ? { },
-    extraPackages ? components.extraPackages or [ ],
+  extraPackages ? components.extraPackages or []
-  }:
+}:
 
-  let
+let
-    inherit (builtins)
+  inherit (builtins) attrValues filter mapAttrs removeAttrs;
-      attrValues
-      filter
-      mapAttrs
-      removeAttrs
-      ;
 
-    __components = removeAttrs components [ "extraPackages" ];
+  gcc = gcc13;
-    _components = __components;
+  stdenv = gcc13Stdenv;
-    # _components = lib.traceSeqN 2 {
-    #   inherit unpatched __components;
-    #   deps = builtins.map (x: "${x.pname}-${x.version}") unpatched.deps;
-    # } __components;
 
-    wrapIntel =
+  __components = removeAttrs components ["extraPackages"];
-      cc:
+  _components = __components;
-      let
+  # _components = lib.traceSeqN 2 {
-        targetConfig = stdenv.targetPlatform.config;
+  #   inherit unpatched __components;
-      in
+  #   deps = builtins.map (x: "${x.pname}-${x.version}") unpatched.deps;
-      (wrapCCWith {
+  # } __components;
-        inherit cc;
 
-        nixSupport = {
+  wrapIntel = { cc, extraBuildCommands ? "", extraInstall ? "", ... }@args:
-          cc-ldflags = [
+    let
-            "-L${gcc.cc}/lib/gcc/${targetConfig}/${gcc.version}"
+      targetConfig = stdenv.targetPlatform.config;
-            "-L${gcc.cc.lib}/lib"
+    in (wrapCCWith {
-            "-L${cc}/lib"
+      inherit cc;
-          ];
+      extraBuildCommands = ''
-          cc-cflags = [
+        echo "-L${gcc.cc}/lib/gcc/${targetConfig}/${gcc.version}" >> $out/nix-support/cc-ldflags
-            "--gcc-toolchain=${gcc.cc}"
+        echo "-L${gcc.cc.lib}/lib" >> $out/nix-support/cc-ldflags
-            "-isystem \"${cc.original}/lib/clang/*/include\""
+        echo "-L${cc}/lib" >> $out/nix-support/cc-ldflags
-            "-isystem ${cc}/include"
-            "-isystem ${cc}/include/intel64"
-            "-isystem ${gcc.cc}/lib/gcc/${targetConfig}/${gcc.version}/include"
-          ];
-          libcxx-cxxflags = [
-            # "--gcc-toolchain=${gcc.cc}"
-            "-isystem ${gcc.cc}/include/c++/${gcc.version}"
-            "-isystem ${gcc.cc}/include/c++/${gcc.version}/${targetConfig}"
-          ];
-        };
 
-        extraBuildCommands = ''
+        # echo "--gcc-toolchain=${gcc.cc}" >> $out/nix-support/libcxx-cxxflags
-          # FIXME: We should find a better way to modify the PATH instead of using
+        echo "--gcc-toolchain=${gcc.cc}" >> $out/nix-support/cc-cflags
-          # this ugly hack. See https://jungle.bsc.es/git/rarias/bscpkgs/issues/9
-          echo 'path_backup="${gcc.cc}/bin:$path_backup"' >>$out/nix-support/cc-wrapper-hook
 
-          # Disable hardening by default
+        # For some reason, If we don't resolve the realpath things go wrong
-          echo "" > $out/nix-support/add-hardening.sh
+        for stddef in ${cc}/lib/clang/*/include/stddef.h ; do
+          dir=$(dirname $(realpath "$stddef"))
+          echo "-isystem $dir" >> $out/nix-support/cc-cflags
+        done
 
-          wrap icx  $wrapper $ccPath/icx
+        echo "-isystem ${cc}/include" >> $out/nix-support/cc-cflags
-          wrap icpx $wrapper $ccPath/icpx
+        echo "-isystem ${cc}/include/intel64" >> $out/nix-support/cc-cflags
-          wrap ifx  $wrapper $ccPath/ifx
 
-          ln -s $out/bin/icpx $out/bin/c++
+        for dir in ${gcc.cc}/lib/gcc/${targetConfig}/*/include; do
-          ln -s $out/bin/icx  $out/bin/cc
+          echo "-isystem $dir" >> $out/nix-support/cc-cflags
+        done
 
-          sed -i 's/.*isCxx=0/isCxx=1/' $out/bin/icpx
+        for dir in ${gcc.cc}/include/c++/*; do
+          echo "-isystem $dir" >> $out/nix-support/libcxx-cxxflags
+        done
+        for dir in ${gcc.cc}/include/c++/*/${targetConfig}; do
+          echo "-isystem $dir" >> $out/nix-support/libcxx-cxxflags
+        done
 
-          # Use this to detect when a compiler subprocess is called
+        # FIXME: We should find a better way to modify the PATH instead of using
-          # from icpx (--fsycl-host-compiler)
+        # this ugly hack. See https://jungle.bsc.es/git/rarias/bscpkgs/issues/9
-          echo 'export NIX_CC_WRAPPER_INTEL=1' >>$out/nix-support/cc-wrapper-hook
+        echo 'path_backup="${gcc.cc}/bin:$path_backup"' >> $out/nix-support/cc-wrapper-hook
 
-          # oneMath looks for sycl libraries in bin/../lib
+        # Disable hardening by default
-          ln -s ${cc}/lib $out/lib
+        echo "" > $out/nix-support/add-hardening.sh
-          ln -s ${cc}/include $out/include
+      '' + extraBuildCommands;
-        '';
+    } // (removeAttrs args ["cc" "extraBuildCommands" "extraInstall"])
-      }).overrideAttrs
+    ).overrideAttrs (old: {
-        (old: {
+      installPhase = old.installPhase + extraInstall;
-          installPhase = old.installPhase + ''
+    });
-            export named_cc="icx"
-            export named_cxx="icpx"
-            export named_fc="ifx"
-          '';
-        });
 
-  in
+in
-  stdenvNoCC.mkDerivation (finalAttrs: {
+stdenvNoCC.mkDerivation (finalAttrs: {
-    pname = lib.removeSuffix "-extracted" unpatched.pname;
+  pname = lib.removeSuffix "-extracted" unpatched.pname;
-    inherit (unpatched) version;
+  inherit (unpatched) version;
-    src = unpatched;
+  src = unpatched;
 
-    phases = [
+  phases = [ "installPhase" "fixupPhase" ];
-      "installPhase"
+  buildInputs = [
-      "fixupPhase"
+    libffi_3_3
-    ];
+    libelf
-    buildInputs = [
+    libxml2
-      libffi_3_3
+    hwloc
-      libelf
+    numactl
-      libxml2
+    libuuid
-      hwloc
+    libpsm2
-      numactl
+    zlib
-      libuuid
+    ocl-icd
-      libpsm2
+    rdma-core
-      zlib
+    ucx
-      ocl-icd
+    openssl
-      rdma-core
+    python3
-      ucx
+    stdenv.cc.cc.lib
-      openssl
+  ] ++ extraPackages;
-      python3
-      stdenv.cc.cc.lib
-    ]
-    ++ extraPackages;
 
-    autoPatchelfIgnoreMissingDeps = [
+  autoPatchelfIgnoreMissingDeps = [ "libhwloc.so.5" "libcuda.so.1" "libze_loader.so.1" ];
-      "libhwloc.so.5"
-      "libcuda.so.1"
-      "libze_loader.so.1"
-    ];
 
-    # There are broken symlinks that go outside packages, ignore them
+  # There are broken symlinks that go outside packages, ignore them
-    dontCheckForBrokenSymlinks = true;
+  dontCheckForBrokenSymlinks = true;
 
-    nativeBuildInputs = [ autoPatchelfHook ];
+  nativeBuildInputs = [ autoPatchelfHook ];
-    installPhase = ''
+  installPhase = ''
-      cp -r $src/opt/intel/oneapi/ $out
+    cp -r $src/opt/intel/oneapi/ $out
-    '';
+  '';
 
-    passthru =
+  passthru = let
-      let
+    pkgs = mapAttrs
-        pkgs = mapAttrs (
+      (folder: version: symlinkJoin {
-          folder: version:
+        pname = "intel-${folder}";
-          let
+        inherit version;
-            original = "${finalAttrs.finalPackage}/${folder}/${version}";
+        paths = ["${finalAttrs.finalPackage}/${folder}/${version}"];
-          in
+      })
-          (symlinkJoin {
+      _components;
-            pname = "intel-${folder}";
+  in pkgs // {
-            inherit version;
+    inherit unpatched;
-            paths = [ original ];
+    pkgs = recurseIntoAttrs pkgs;
-          }).overrideAttrs
+    components = _components;
-            { passthru = { inherit original; }; }
-        ) _components;
-      in
-      pkgs
-      // {
-        inherit unpatched;
-        pkgs = lib.recurseIntoAttrs pkgs;
-        components = _components;
 
-        # This contains all packages properly symlinked into toplevel directories
+    # This contains all packages properly symlinked into toplevel directories
-        # in $out.
+    # in $out.
-        #
+    #
-        # NOTE: there are clashes with packages that have symlinks outside their
+    # NOTE: there are clashes with packages that have symlinks outside their
-        # scope (libtcm and env/vars.sh)
+    # scope (libtcm and env/vars.sh)
-        all = symlinkJoin {
+    all = symlinkJoin {
-          pname = finalAttrs.finalPackage + "-symlinked";
+      pname = finalAttrs.finalPackage + "-symlinked";
-          inherit (finalAttrs.finalPackage) version;
+      inherit (finalAttrs.finalPackage) version;
-          paths = filter lib.isDerivation (attrValues finalAttrs.finalPackage.pkgs);
+      paths = filter lib.isDerivation (attrValues finalAttrs.finalPackage.pkgs);
-        };
+    };
 
-        stdenv = overrideCC stdenv finalAttrs.finalPackage.cc;
+    stdenv = overrideCC stdenv finalAttrs.finalPackage.cc;
 
-        cc = wrapIntel finalAttrs.finalPackage.pkgs.compiler;
+    cc = wrapIntel {
-      };
+      cc = finalAttrs.finalPackage.pkgs.compiler;
+      extraBuildCommands = ''
+        wrap icx  $wrapper $ccPath/icx
+        wrap icpx $wrapper $ccPath/icpx
+        wrap ifx  $wrapper $ccPath/ifx
 
-  })
+        ln -s $out/bin/icpx $out/bin/c++
-)
+        ln -s $out/bin/icx  $out/bin/cc
+
+        # Use this to detect when a compiler subprocess is called
+        # from icpx (--fsycl-host-compiler)
+        echo 'export "NIX_CC_WRAPPER_INTEL=1"' >> $out/nix-support/cc-wrapper-hook
+
+        sed -i 's/.*isCxx=0/isCxx=1/' $out/bin/icpx
+
+        # oneMath looks for sycl libraries in bin/../lib
+        ln -s ${finalAttrs.finalPackage.pkgs.compiler}/lib $out/lib
+        ln -s ${finalAttrs.finalPackage.pkgs.compiler}/include $out/include
+      '';
+      extraInstall = ''
+        export named_cc="icx"
+        export named_cxx="icpx"
+        export named_fc="ifx"
+      '';
+    };
+  };
+
+}))

pkgs/llvm-ompss2/clang.nix

@@ -16,19 +16,19 @@
 , useGit ? false
 , gitUrl ? "ssh://git@bscpm04.bsc.es/llvm-ompss/llvm-mono.git"
 , gitBranch ? "master"
-, gitCommit ? "872ba63f86edaefc9787984ef3fae9f2f94e0124" # github-release-2025.11
+, gitCommit ? "880e2341c56bad1dc14e8c369fb3356bec19018e"
 }:
 
 let
   stdenv = llvmPackages_latest.stdenv;
 
   release = rec {
-    version = "2025.11";
+    version = "2025.06";
     src = fetchFromGitHub {
       owner = "bsc-pm";
       repo = "llvm";
       rev = "refs/tags/github-release-${version}";
-      hash = "sha256-UgwMTUkM9Z87dDH205swZFBeFhrcbLAxginViG40pBM=";
+      hash = "sha256-ww9PpRmtz/M9IyLiZ8rAehx2UW4VpQt+svf4XfKBzKo=";
     };
   };
 
@@ -126,12 +126,4 @@ in stdenv.mkDerivation {
 # nanos6 installation, but this is would require a recompilation of clang each
 # time nanos6 is changed. Better to use the environment variable NANOS6_HOME,
 # and specify nanos6 at run time.
-
-  meta = {
-    homepage = "https://gitlab.pm.bsc.es/llvm-ompss/llvm-mono";
-    description = "C language family frontend for LLVM (for OmpSs-2)";
-    maintainers = with lib.maintainers.bsc; [ rpenacob ];
-    platforms = lib.platforms.linux;
-    license = [ lib.licenses.asl20 lib.licenses.llvm-exception ];
-  };
 }

pkgs/llvm-ompss2/default.nix

@@ -2,6 +2,7 @@
   stdenv
 , lib
 , gcc
+, gcc13
 , clangOmpss2Unwrapped
 , writeShellScript
 , openmp ? null
@@ -28,10 +29,10 @@ let
   # We need to replace the lld linker from bintools with our linker just built,
   # otherwise we run into incompatibility issues when mixing compiler and linker
   # versions.
-  bintools-unwrapped = llvmPackages_latest.bintools-unwrapped.override {
+  bintools-unwrapped = llvmPackages_latest.tools.bintools-unwrapped.override {
     lld = clangOmpss2Unwrapped;
   };
-  bintools = llvmPackages_latest.bintools.override {
+  bintools = llvmPackages_latest.tools.bintools.override {
     bintools = bintools-unwrapped;
   };
   targetConfig = stdenv.targetPlatform.config;
@@ -92,7 +93,8 @@ let
   '';
 
   wrappedCCIntel = wrapCCWith {
-    inherit cc bintools extraPackages;
+    inherit bintools extraPackages;
+    cc = cc.override { gcc = gcc13; }; # Intel uses gcc13, so we have to match it
     # extraPackages adds packages to depsTargetTargetPropagated
     extraBuildCommands = intelExtraBuildCommands + envExports;
   };

pkgs/llvm-ompss2/openmp.nix

@@ -74,13 +74,5 @@ stdenv.mkDerivation rec {
   passthru = {
     inherit nosv;
   };
-
-  meta = {
-    homepage = "https://gitlab.pm.bsc.es/llvm-ompss/llvm-mono";
-    description = "Support for the OpenMP language (with nOS-V)";
-    maintainers = with lib.maintainers.bsc; [ rpenacob ];
-    platforms = lib.platforms.linux;
-    license = [ lib.licenses.asl20 lib.licenses.llvm-exception ];
-  };
 }
 

pkgs/lmbench/default.nix

@@ -35,16 +35,13 @@ stdenv.mkDerivation rec {
       CFLAGS=-Wno-implicit-int
       CPPFLAGS=-I${libtirpc.dev}/include/tirpc
       LDFLAGS=-ltirpc
-      CC=$CC
-      AR=$AR
     )
   '';
 
   meta = {
     description = "lmbench";
-    homepage = "https://github.com/intel/lmbench";
+    homepage = "http://www.bitmover.com/lmbench/";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
+    maintainers = [ ];
     platforms = lib.platforms.all;
-    license = lib.licenses.gpl2Plus;
   };
 }

pkgs/maintainers.nix

@@ -1,7 +0,0 @@
-builtins.mapAttrs (name: value: { email = name + "@bsc.es"; } // value) {
-  abonerib.name = "Aleix Boné";
-  arocanon.name = "Aleix Roca";
-  rarias.name = "Rodrigo Arias";
-  rpenacob.name = "Raúl Peñacoba";
-  varcila.name = "Vincent Arcila";
-}

pkgs/mcxx/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , fetchFromGitHub
 , autoreconfHook
 , nanos6
@@ -63,13 +62,4 @@ stdenv.mkDerivation rec {
 # Fails with "memory exhausted" with bison 3.7.1
 #    "--enable-bison-regeneration"
   ];
-
-  meta = {
-    broken = true;
-    homepage = "https://github.com/bsc-pm/mcxx";
-    description = "C/C++/Fortran source-to-source compilation infrastructure aimed at fast prototyping";
-    maintainers = with lib.maintainers.bsc; [ rpenacob ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.gpl3Plus;
-  };
 }

pkgs/mcxx/git.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , fetchFromGitHub
 , autoreconfHook
 , nanos6
@@ -58,12 +57,4 @@ stdenv.mkDerivation rec {
 # Fails with "memory exhausted" with bison 3.7.1
 #    "--enable-bison-regeneration"
   ];
-
-  meta = {
-    homepage = "https://github.com/bsc-pm/mcxx";
-    description = "C/C++/Fortran source-to-source compilation infrastructure aimed at fast prototyping";
-    maintainers = with lib.maintainers.bsc; [ rpenacob ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.gpl3Plus;
-  };
 }

pkgs/mcxx/rarias.nix

@@ -1,5 +1,4 @@
 { stdenv
-, lib
 , fetchgit
 , autoreconfHook
 , nanos6
@@ -57,12 +56,4 @@ stdenv.mkDerivation rec {
   #preBuild = ''
   #  make generate_builtins_ia32 GXX_X86_BUILTINS=${gcc}/bin/g++
   #'';
-  #
-  meta = {
-    homepage = "https://github.com/bsc-pm/mcxx";
-    description = "C/C++/Fortran source-to-source compilation infrastructure aimed at fast prototyping";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.gpl3Plus;
-  };
 }

pkgs/meteocat-exporter/default.nix

@@ -1,11 +1,9 @@
 { python3Packages, lib }:
 
-python3Packages.buildPythonApplication {
+python3Packages.buildPythonApplication rec {
   pname = "meteocat-exporter";
   version = "1.0";
 
-  pyproject = true;
-
   src = ./.;
 
   doCheck = false;

pkgs/mpich/default.nix

@@ -6,13 +6,6 @@
 , pmix
 , gfortran
 , symlinkJoin
-# Disabled when cross-compiling
-# To fix cross compilation, we should fill the values in:
-# https://github.com/pmodels/mpich/blob/main/maint/fcrosscompile/cross_values.txt.in
-# For each arch
-, enableFortran ? stdenv.hostPlatform == stdenv.buildPlatform
-, perl
-, targetPackages
 }:
 
 let
@@ -22,13 +15,10 @@ let
     paths = [ pmix.dev pmix.out ];
   };
 in mpich.overrideAttrs (old: {
-  buildInputs = old.buildInputs ++ [
+  buildInput = old.buildInputs ++ [
     libfabric
     pmixAll
   ];
-  nativeBuildInputs = old.nativeBuildInputs ++ [
-    perl
-  ];
   configureFlags = [
     "--enable-shared"
     "--enable-sharedlib"
@@ -41,21 +31,6 @@ in mpich.overrideAttrs (old: {
   ] ++ lib.optionals (lib.versionAtLeast gfortran.version "10") [
     "FFLAGS=-fallow-argument-mismatch" # https://github.com/pmodels/mpich/issues/4300
     "FCFLAGS=-fallow-argument-mismatch"
-  ] ++ lib.optionals (!enableFortran) [
-    "--disable-fortran"
   ];
-
-  preFixup = ''
-    sed -i 's:^CC=.*:CC=${targetPackages.stdenv.cc}/bin/${targetPackages.stdenv.cc.targetPrefix}cc:' $out/bin/mpicc
-    sed -i 's:^CXX=.*:CXX=${targetPackages.stdenv.cc}/bin/${targetPackages.stdenv.cc.targetPrefix}c++:' $out/bin/mpicxx
-  '' + lib.optionalString enableFortran ''
-    sed -i 's:^FC=.*:FC=${targetPackages.gfortran or gfortran}/bin/${targetPackages.gfortran.targetPrefix or gfortran.targetPrefix}gfortran:' $out/bin/mpifort
-  '';
-
   hardeningDisable = [ "all" ];
-
-  meta = old.meta // {
-    maintainers = old.meta.maintainers ++ (with lib.maintainers.bsc; [ rarias ]);
-    cross = true;
-  };
 })

pkgs/nanos6/default.nix

@@ -16,7 +16,6 @@
 , jemallocNanos6 ? null
 , cachelineBytes ? 64
 , enableGlibcxxDebug ? false
-, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
 , useGit ? false
 , gitUrl ? "ssh://git@bscpm04.bsc.es/nanos6/nanos6"
 , gitBranch ? "master"
@@ -48,8 +47,6 @@ let
   };
 
   source = if (useGit) then git else release;
-
-  isCross = stdenv.hostPlatform != stdenv.buildPlatform;
 in
   stdenv.mkDerivation (source // {
     pname = "nanos6";
@@ -74,13 +71,9 @@ in
       "--disable-all-instrumentations"
       "--enable-ovni-instrumentation"
       "--with-ovni=${ovni}"
-      "--with-boost=${boost.dev}"
     ] ++
       (optional enableJemalloc "--with-jemalloc=${jemallocNanos6}") ++
-      (optional enableGlibcxxDebug "CXXFLAGS=-D_GLIBCXX_DEBUG") ++
+      (optional enableGlibcxxDebug "CXXFLAGS=-D_GLIBCXX_DEBUG");
-      # Most nanos6 api symbols are resolved at runtime, so prefer
-      # ifunc by default
-      (optional isCross "--with-symbol-resolution=ifunc");
 
     postConfigure = lib.optionalString (!enableDebug) ''
       # Disable debug
@@ -104,14 +97,16 @@ in
       # TODO: papi_version is needed for configure:
       # ./configure: line 27378: papi_version: command not found
       # This probably breaks cross-compilation
-    ] ++ lib.optionals enablePapi [ papi ];
+      papi
+    ];
 
     buildInputs = [
       boost
       numactl
       hwloc
+      papi
       ovni
-    ] ++ lib.optionals enablePapi [ papi ];
+    ];
 
     # Create a script that sets NANOS6_HOME
     postInstall = ''
@@ -119,12 +114,11 @@ in
       echo "export NANOS6_HOME=$out" >> $out/nix-support/setup-hook
     '';
 
-    meta = {
+    meta = with lib; {
       homepage = "https://github.com/bsc-pm/nanos6";
       description = "Nanos6 runtime for OmpSs-2" +
         optionalString (enableDebug) " (with debug symbols)";
-      maintainers = with lib.maintainers.bsc; [ rarias ];
+      platforms = platforms.linux;
-      platforms = lib.platforms.linux;
+      license = licenses.gpl3;
-      license = lib.licenses.gpl3Plus;
     };
   })

pkgs/nanos6/jemalloc.nix

@@ -1,4 +1,4 @@
-{ jemalloc, lib }:
+{ jemalloc }:
 
 jemalloc.overrideAttrs (old: {
   configureFlags = old.configureFlags ++ [
@@ -8,6 +8,5 @@ jemalloc.overrideAttrs (old: {
   hardeningDisable = [ "all" ];
   meta = old.meta // {
     description = old.meta.description + " (for Nanos6)";
-    maintainers = (old.meta.maintainers or []) ++ (with lib.maintainers.bsc; [ rarias ]);
   };
 })

pkgs/nix-wrap/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , bashInteractive
 , busybox
 , nix
@@ -87,14 +86,5 @@ stdenv.mkDerivation rec {
     mkdir -p $out/share
     cp ${nix_conf} $out/share/nix.conf
   '';
-
-  meta = {
-    homepage = null;
-    description = "nix bubblewrap wrapper";
-    maintainers = [ ];
-    broken = true;
-    platforms = lib.platforms.linux;
-    license = lib.licenses.mit;
-  };
 }
 

pkgs/nixgen/default.nix

@@ -1,22 +0,0 @@
-{
-  stdenv
-, lib
-}:
-
-stdenv.mkDerivation {
-  pname = "nixgen";
-  version = "0.0.1";
-  src = ./nixgen;
-  dontUnpack = true;
-  phases = [ "installPhase" ];
-  installPhase = ''
-    mkdir -p $out/bin
-    cp -a $src $out/bin/nixgen
-  '';
-  meta = {
-    description = "Quickly generate flake.nix from command line";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.gpl3Plus;
-  };
-}

pkgs/nixgen/nixgen

@@ -1,97 +0,0 @@
-#!/bin/sh
-#
-# Copyright (c) 2025, Barcelona Supercomputing Center (BSC)
-# SPDX-License-Identifier: GPL-3.0+
-# Author: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
-
-function usage() {
-  echo "USAGE: nixgen [-f] [package [...]] [-b package [...]]" >&2
-  echo "  Generates a flake.nix file with the given packages." >&2
-  echo "  After flake.nix is created, use 'nix develop' to enter the shell." >&2
-  echo "OPTIONS" >&2
-  echo "  -f               Overwrite existing flake.nix (default: no)." >&2
-  echo "  packages...      Add these packages to the shell." >&2
-  echo "  -b packages...   Add the dependencies needed to build these packages." >&2
-  echo "EXAMPLE" >&2
-  echo "  $ nixgen ovni bigotes -b nosv tampi" >&2
-  echo "  Adds the packages ovni and bigotes as well as all required dependencies" >&2
-  echo "  to build nosv and tampi." >&2
-  echo "AUTHOR" >&2
-  echo "  Rodrigo Arias Mallo <rodrigo.arias@bsc.es>" >&2
-  exit 1
-}
-
-mode=package
-packages=
-inputsFrom=
-force=
-
-if [[ $# -eq 0 ]]; then
-  usage
-fi
-
-while [[ $# -gt 0 ]]; do
-    case $1 in -b)
-      mode=build
-      shift
-      ;;
-    -f)
-      force=1
-      shift
-      ;;
-    -h)
-      usage
-      ;;
-    -*|--*)
-      echo "error: unknown option $1" >&2
-      exit 1
-      ;;
-    *)
-      if [ "$mode" == "package" ]; then
-        packages+="${packages:+ }$1"
-      else
-        inputsFrom+="${inputsFrom:+ }$1"
-      fi
-      shift
-      ;;
-  esac
-done
-
-if [ ! "$force" -a -e flake.nix ]; then
-  echo "error: flake.nix exists, force overwrite with -f" >&2
-  exit 1
-fi
-
-cat > flake.nix <<EOF
-{
-  inputs.jungle.url = "git+https://jungle.bsc.es/git/rarias/jungle";
-  outputs = { self, jungle }:
-  let
-    nixpkgs = jungle.inputs.nixpkgs;
-    customOverlay = (final: prev: {
-      # Example overlay, for now empty
-    });
-    pkgs = import nixpkgs {
-      system = "x86_64-linux";
-      overlays = [
-        # Apply jungle overlay to get our BSC custom packages
-        jungle.outputs.bscOverlay
-        # And on top apply our local changes to customize for cluster
-        customOverlay
-      ];
-    };
-  in {
-    devShells.x86_64-linux.default = pkgs.mkShell {
-      pname = "devshell";
-      # Include these packages in the shell
-      packages = with pkgs; [
-        $packages
-      ];
-      # The dependencies needed to build these packages will be also included
-      inputsFrom = with pkgs; [
-        $inputsFrom
-      ];
-    };
-  };
-}
-EOF

pkgs/nixtools/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , glibc
 }:
 
@@ -16,11 +15,4 @@ stdenv.mkDerivation rec {
   makeFlags = [ "DESTDIR=$(out)" ];
   preBuild = "env";
   dontPatchShebangs = true;
-
-  meta = {
-    homepage = "https://gitlab.pm.bsc.es/rarias/nixtools";
-    description = "nix bubblewrap wrapper";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-  };
 }

pkgs/nodes/default.nix

@@ -3,6 +3,7 @@
 , lib
 , fetchFromGitHub
 , pkg-config
+, perl
 , numactl
 , hwloc
 , boost
@@ -10,23 +11,22 @@
 , ovni
 , nosv
 , clangOmpss2
-, which
 , useGit ? false
 , gitUrl ? "ssh://git@gitlab-internal.bsc.es/nos-v/nodes.git"
 , gitBranch ? "master"
-, gitCommit ? "511489e71504a44381e0930562e7ac80ac69a848" # version-1.4
+, gitCommit ? "6002ec9ae6eb876d962cc34366952a3b26599ba6"
 }:
 
 with lib;
 
 let
   release = rec {
-    version = "1.4";
+    version = "1.3";
     src = fetchFromGitHub {
       owner = "bsc-pm";
       repo = "nodes";
       rev = "version-${version}";
-      hash = "sha256-+lR/R0l3fGZO3XG7whMorFW2y2YZ0ZFnLeOHyQYrAsQ=";
+      hash = "sha256-cFb9pxcjtkMmH0CsGgUO9LTdXDNh7MCqicgGWawLrsU=";
     };
   };
 
@@ -59,7 +59,6 @@ in
     doCheck = false;
     nativeCheckInputs = [
       clangOmpss2
-      which
     ];
 
     # The "bindnow" flags are incompatible with ifunc resolution mechanism. We
@@ -82,12 +81,4 @@ in
     passthru = {
       inherit nosv;
     };
-
-    meta = {
-      homepage = "https://gitlab.bsc.es/nos-v/nodes";
-      description = "Runtime library designed to work on top of the nOS-V runtime";
-      maintainers = with lib.maintainers.bsc; [ abonerib rarias ];
-      platforms = lib.platforms.linux;
-      license = lib.licenses.gpl3Plus;
-    };
   }

pkgs/nosv/default.nix

@@ -7,25 +7,25 @@
 , numactl
 , hwloc
 , papi
-, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
+, enablePapi ? true
 , cacheline ? 64 # bits
 , ovni ? null
 , useGit ? false
 , gitUrl ? "git@gitlab-internal.bsc.es:nos-v/nos-v.git"
 , gitBranch ? "master"
-, gitCommit ? "1108e4786b58e0feb9a16fa093010b763eb2f8e8" # version 4.0.0
+, gitCommit ? "9f47063873c3aa9d6a47482a82c5000a8c813dd8"
 }:
 
 with lib;
 
 let
   release = rec {
-    version = "4.0.0";
+    version = "3.2.0";
     src = fetchFromGitHub {
       owner = "bsc-pm";
       repo = "nos-v";
       rev = "${version}";
-      hash = "sha256-llaq73bd/YxLVKNlMebnUHKa4z3sdcsuDUoVwUxNuw8=";
+      hash = "sha256-yaz92426EM8trdkBJlISmAoG9KJCDTvoAW/HKrasvOw=";
     };
   };
 
@@ -59,12 +59,4 @@ in
       hwloc
       ovni
     ] ++ lib.optionals enablePapi [ papi ];
-
-    meta = {
-      homepage = "https://gitlab.bsc.es/nos-v/nos-v";
-      description = "Tasking library enables the co-execution of multiple applications with system-wide scheduling and a centralized management of resources";
-      maintainers = with lib.maintainers.bsc; [ abonerib rarias ];
-      platforms = lib.platforms.linux;
-      license = lib.licenses.gpl3Plus;
-    };
   }

pkgs/onemath/default.nix

@@ -1,33 +1,30 @@
-{
+{ lib
-  lib,
+, fetchFromGitHub
-  fetchFromGitHub,
+, cmake
-  cmake,
+, withCFlags
-  withCFlags,
+, intelPackages
-  intelPackages,
 
-  mklSupport ? true,
+, mklSupport ? true
 
-  config,
+, config
 
-  cudaSupport ? config.cudaSupport,
+, cudaSupport ? config.cudaSupport
-  cudaPackages ? { },
+, cudaPackages ? { }
 
-  rocmSupport ? config.rocmSupport,
+, rocmSupport ? config.rocmSupport
-  hipTargets ? null, # only one target at a time supported
+, hipTargets ? null # only one target at a time supported
-  rocmPackages ? { },
+, rocmPackages ? { }
 }:
 
 let
   # rocmSupport is not enough, we need a specific target
   enableHip = rocmSupport && hipTargets != null;
 
-  stdenv = withCFlags (lib.optionals cudaSupport [
+  stdenv = withCFlags (lib.optionals cudaSupport [ "--cuda-path=${cudaPackages.cudatoolkit}" ]) intelPackages.stdenv;
-    "--cuda-path=${cudaPackages.cudatoolkit}"
-  ]) intelPackages.stdenv;
 in
 
-# at least one backend has to be enabled
+  # at least one backend has to be enabled
-assert mklSupport || cudaSupport || enableHip;
+  assert mklSupport || cudaSupport || enableHip;
 
 stdenv.mkDerivation rec {
   pname = "oneMath";
@@ -41,51 +38,47 @@ stdenv.mkDerivation rec {
   };
 
   cmakeFlags = [
-    (lib.cmakeBool "ENABLE_MKLCPU_BACKEND" mklSupport)
+    (lib.cmakeBool "ENABLE_MKLCPU_BACKEND"    mklSupport)
-    (lib.cmakeBool "ENABLE_MKLGPU_BACKEND" mklSupport)
+    (lib.cmakeBool "ENABLE_MKLGPU_BACKEND"    mklSupport)
 
-    (lib.cmakeBool "ENABLE_CUBLAS_BACKEND" cudaSupport)
+    (lib.cmakeBool "ENABLE_CUBLAS_BACKEND"    cudaSupport)
-    (lib.cmakeBool "ENABLE_CUFFT_BACKEND" cudaSupport)
+    (lib.cmakeBool "ENABLE_CUFFT_BACKEND"     cudaSupport)
-    (lib.cmakeBool "ENABLE_CURAND_BACKEND" cudaSupport)
+    (lib.cmakeBool "ENABLE_CURAND_BACKEND"    cudaSupport)
-    (lib.cmakeBool "ENABLE_CUSOLVER_BACKEND" cudaSupport)
+    (lib.cmakeBool "ENABLE_CUSOLVER_BACKEND"  cudaSupport)
-    (lib.cmakeBool "ENABLE_CUSPARSE_BACKEND" cudaSupport)
+    (lib.cmakeBool "ENABLE_CUSPARSE_BACKEND"  cudaSupport)
 
-    (lib.cmakeBool "ENABLE_ROCBLAS_BACKEND" enableHip)
+    (lib.cmakeBool "ENABLE_ROCBLAS_BACKEND"   enableHip)
-    (lib.cmakeBool "ENABLE_ROCFFT_BACKEND" enableHip)
+    (lib.cmakeBool "ENABLE_ROCFFT_BACKEND"    enableHip)
     (lib.cmakeBool "ENABLE_ROCSOLVER_BACKEND" enableHip)
-    (lib.cmakeBool "ENABLE_ROCRAND_BACKEND" enableHip)
+    (lib.cmakeBool "ENABLE_ROCRAND_BACKEND"   enableHip)
     (lib.cmakeBool "ENABLE_ROCSPARSE_BACKEND" enableHip)
 
     (lib.cmakeBool "BUILD_FUNCTIONAL_TESTS" false)
     (lib.cmakeBool "BUILD_EXAMPLES" false)
-  ]
+  ] ++ lib.optionals enableHip [
-  ++ lib.optionals enableHip [
     (lib.cmakeFeature "HIP_TARGETS" hipTargets)
   ];
 
   nativeBuildInputs = [ cmake ];
-  buildInputs =
+  buildInputs = lib.optionals (mklSupport) [
-    lib.optionals (mklSupport) [
+    intelPackages.mkl
-      intelPackages.mkl
+    intelPackages.tbb
-      intelPackages.tbb
+  ] ++ lib.optionals (enableHip) [
-    ]
+    rocmPackages.rocmPath
-    ++ lib.optionals (enableHip) [
+    rocmPackages.rocblas
-      rocmPackages.rocmPath
+    rocmPackages.rocfft
-      rocmPackages.rocblas
+    rocmPackages.rocsolver
-      rocmPackages.rocfft
+    rocmPackages.rocrand
-      rocmPackages.rocsolver
+    rocmPackages.rocsparse
-      rocmPackages.rocrand
+  ] ++ lib.optionals (cudaSupport) [
-      rocmPackages.rocsparse
+    (lib.getDev cudaPackages.cuda_cudart)
-    ]
+    cudaPackages.cudatoolkit
-    ++ lib.optionals (cudaSupport) [
-      (lib.getDev cudaPackages.cuda_cudart)
-      cudaPackages.cudatoolkit
 
-      cudaPackages.libcublas
+    cudaPackages.libcublas
-      cudaPackages.libcurand
+    cudaPackages.libcurand
-      cudaPackages.libcufft
+    cudaPackages.libcufft
-      cudaPackages.libcusparse
+    cudaPackages.libcusparse
-      cudaPackages.libcusolver
+    cudaPackages.libcusolver
-    ];
+  ];
 
 }

pkgs/osu/default.nix

@@ -32,11 +32,6 @@ stdenv.mkDerivation rec {
       "CXX=mpicxx"
   ];
 
-  env = {
-    MPICH_CC="${stdenv.cc}/bin/${stdenv.cc.targetPrefix}cc";
-    MPICH_CXX="${stdenv.cc}/bin/${stdenv.cc.targetPrefix}c++";
-  };
-
   postInstall = ''
     mkdir -p $out/bin
     for f in $(find $out -executable -type f); do
@@ -49,6 +44,5 @@ stdenv.mkDerivation rec {
     homepage = "http://mvapich.cse.ohio-state.edu/benchmarks/";
     maintainers = [ ];
     platforms = lib.platforms.all;
-    cross = true;
   };
 }

pkgs/ovni/default.nix

@@ -7,7 +7,7 @@
 , useGit ? false
 , gitBranch ? "master"
 , gitUrl ? "ssh://git@bscpm04.bsc.es/rarias/ovni.git"
-, gitCommit ? "06432668f346c8bdc1006fabc23e94ccb81b0d8b" # version 1.13.0
+, gitCommit ? "e4f62382076f0cf0b1d08175cf57cc0bc51abc61"
 , enableDebug ? false
 # Only enable MPI if the build is native (fails on cross-compilation)
 , useMpi ? (stdenv.buildPlatform.canExecute stdenv.hostPlatform)
@@ -15,13 +15,13 @@
 
 let
   release = rec {
-    version = "1.13.0";
+    version = "1.12.0";
     src = fetchFromGitHub {
       owner = "bsc-pm";
       repo = "ovni";
       rev = "${version}";
-      hash = "sha256-0l2ryIyWNiZqeYdVlnj/WnQGS3xFCY4ICG8JedX424w=";
+      hash = "sha256-H04JvsVKrdqr3ON7JhU0g17jjlg/jzQ7eTfx9vUNd3E=";
-    } // { shortRev = "0643266"; };
+    } // { shortRev = "a73afcf"; };
   };
 
   git = rec {
@@ -55,13 +55,4 @@ in
     doCheck = true;
     checkTarget = "test";
     hardeningDisable = [ "all" ];
-
-    meta = {
-      homepage = "https://ovni.readthedocs.io";
-      description = "Obtuse but Versatile Nanoscale Instrumentation";
-      maintainers = with lib.maintainers.bsc; [ rarias ];
-      platforms = lib.platforms.linux;
-      license = lib.licenses.gpl3Plus;
-      cross = true;
-    };
   }

pkgs/paraver/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , fetchFromGitHub
 , autoreconfHook
 , boost
@@ -12,7 +11,7 @@
 , paraverKernel
 , openssl
 , glibcLocales
-, wrapGAppsHook3
+, wrapGAppsHook
 }:
 
 let
@@ -64,7 +63,7 @@ stdenv.mkDerivation rec {
     autoconf
     automake
     autoreconfHook
-    wrapGAppsHook3
+    wrapGAppsHook
   ];
 
   buildInputs = [
@@ -89,18 +88,4 @@ stdenv.mkDerivation rec {
     mkdir -p $out/share/man
     mv $out/share/doc/wxparaver_help_contents/man $out/share/man/man1
   '';
-
-  meta = {
-    homepage = "https://tools.bsc.es/paraver";
-    downloadPage = "https://github.com/bsc-performance-tools/wxparaver";
-    description = "Performance analyzer based on event traces";
-    longDescription = ''
-      Trace-based visualization and analysis tool designed to study quantitative
-      detailed metrics and obtain qualitative knowledge of the performance of
-      applications, libraries, processors and whole architectures
-    '';
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.lgpl21Plus;
-  };
 }

pkgs/paraver/kernel.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , fetchFromGitHub
 , autoreconfHook
 , boost
@@ -58,13 +57,4 @@ stdenv.mkDerivation rec {
     xml2
     zlib
   ];
-
-  meta = {
-    homepage = "https://tools.bsc.es/paraver";
-    downloadPage = "https://github.com/bsc-performance-tools/paraver-kernel";
-    description = "Kernel library used by wxparaver";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.lgpl21Plus;
-  };
 }

pkgs/sonar/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , autoreconfHook
 , fetchFromGitHub
 , ovni
@@ -28,13 +27,4 @@ stdenv.mkDerivation rec {
     ovni
     mpi
   ];
-
-  meta = {
-    homepage = "https://github.com/bsc-pm/sonar";
-    description = "Set of runtime libraries which instrument parallel programming models through the ovni instrumentation library";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.mit;
-    cross = true;
-  };
 }

pkgs/tagaspi/default.nix

@@ -1,18 +1,26 @@
 {
   stdenv
-, lib
 , fetchFromGitHub
 , automake
 , autoconf
 , libtool
+, mpi
 , autoreconfHook
 , gpi-2
 , boost
 , numactl
 , rdma-core
 , gfortran
+, symlinkJoin
 }:
 
+let
+  mpiAll = symlinkJoin {
+    name = "mpi-all";
+    paths = [ mpi.all ];
+  };
+in
+
 stdenv.mkDerivation rec {
   pname = "tagaspi";
   enableParallelBuilding = true;
@@ -26,18 +34,16 @@ stdenv.mkDerivation rec {
     hash = "sha256-RGG/Re2uM293HduZfGzKUWioDtwnSYYdfeG9pVrX9EM=";
   };
 
-  nativeBuildInputs = [
+  buildInputs = [
     autoreconfHook
     automake
     autoconf
     libtool
-    gfortran
-  ];
-
-  buildInputs = [
     boost
     numactl
     rdma-core
+    gfortran
+    mpiAll
   ];
 
   dontDisableStatic = true;
@@ -49,13 +55,4 @@ stdenv.mkDerivation rec {
   ];
 
   hardeningDisable = [ "all" ];
-
-  meta = {
-    homepage = "https://github.com/bsc-pm/tagaspi";
-    description = "Task-Aware GASPI";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.gpl3Plus;
-    cross = false; # gpi-2 cannot cross
-  };
 }

pkgs/tampi/default.nix

@@ -61,13 +61,4 @@ in stdenv.mkDerivation {
   configureFlags = optional (enableOvni) "--with-ovni=${ovni}";
   dontDisableStatic = true;
   hardeningDisable = [ "all" ];
-
-  meta = {
-    homepage = "https://github.com/bsc-pm/tampi";
-    description = "Task-Aware MPI";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.gpl3Plus;
-    cross = true;
-  };
 }

pkgs/upc-qaire-exporter/default.nix

@@ -1,11 +1,9 @@
 { python3Packages, lib }:
 
-python3Packages.buildPythonApplication {
+python3Packages.buildPythonApplication rec {
   pname = "upc-qaire-exporter";
   version = "1.0";
 
-  pyproject = true;
-
   src = ./.;
 
   doCheck = false;

test/bugs/hwloc.nix

@@ -6,7 +6,6 @@
 
 stdenv.mkDerivation {
   name = "hwloc-test";
-  requiredSystemFeatures = [ "sys-devices" ];
 
   src = ./.;
 
@@ -15,7 +14,7 @@ stdenv.mkDerivation {
   buildPhase = ''
     ls -l /sys
     gcc -lhwloc hwloc.c -o hwloc
-    strace ./hwloc > $out
+    strace ./hwloc
   '';
 
 }

test/compilers/clang-openmp-ld.nix

@@ -23,8 +23,9 @@ in stdenv.mkDerivation {
   dontUnpack = true;
   dontConfigure = true;
 
-  # nOS-V requires access to /sys/devices to request NUMA information
+  # nOS-V requires access to /sys/devices to request NUMA information. It will
-  requiredSystemFeatures = [ "sys-devices" ];
+  # fail to run otherwise, so we disable the sandbox for this test.
+  __noChroot = true;
 
   buildInputs = [ openmp ];
 

test/compilers/clang-openmp-nosv.nix

@@ -36,8 +36,9 @@ in stdenv.mkDerivation {
   dontUnpack = true;
   dontConfigure = true;
 
-  # nOS-V requires access to /sys/devices to request NUMA information
+  # nOS-V requires access to /sys/devices to request NUMA information. It will
-  requiredSystemFeatures = [ "sys-devices" ];
+  # fail to run otherwise, so we disable the sandbox for this test.
+  __noChroot = true;
 
   buildInputs = [ nosv ];
 

test/compilers/clang-openmp.nix

@@ -24,8 +24,9 @@ in stdenv.mkDerivation {
   dontUnpack = true;
   dontConfigure = true;
 
-  # nOS-V requires access to /sys/devices to request NUMA information
+  # nOS-V requires access to /sys/devices to request NUMA information. It will
-  requiredSystemFeatures = [ "sys-devices" ];
+  # fail to run otherwise, so we disable the sandbox for this test.
+  __noChroot = true;
 
   buildPhase = ''
     set -x

test/compilers/hello-sycl.nix

@@ -1,8 +1,4 @@
-{
+{ intelPackages,  writeText, strace }:
-  intelPackages,
-  writeText,
-  strace,
-}:
 
 let
   stdenv = intelPackages.stdenv;
@@ -38,10 +34,7 @@ in
 stdenv.mkDerivation {
   version = "0.0.1";
   name = "hello-sycl";
-  buildInputs = [
+  buildInputs = [ stdenv strace ];
-    stdenv
-    strace
-  ];
   src = hello_sycl;
   dontUnpack = true;
   dontConfigure = true;

test/compilers/icpx-ompss2.nix

@@ -1,11 +1,4 @@
-{
+{ writeText, intelPackages, nodes, nosv, clangOmpss2Nodes, strace }:
-  writeText,
-  intelPackages,
-  nodes,
-  nosv,
-  clangOmpss2Nodes,
-  strace,
-}:
 
 let
   hello_cpp = writeText "hello.cpp" ''
@@ -51,12 +44,13 @@ intelPackages.stdenv.mkDerivation {
   dontUnpack = true;
   dontConfigure = true;
 
-  # NODES requires access to /sys/devices to request NUMA information
+  # NODES requires access to /sys/devices to request NUMA information. It will
-  requiredSystemFeatures = [ "sys-devices" ];
+  # fail to run otherwise, so we disable the sandbox for this test.
+  __noChroot = true;
 
   env.NODES_HOME = nodes;
 
-  NIX_DEBUG = 1;
+  NIX_DEBUG = 0;
   buildPhase = ''
     cp $src hello.cpp
     set -x

test/compilers/ompss2.nix

@@ -25,10 +25,9 @@ stdenv.mkDerivation rec {
   hardeningDisable = [ "all" ];
   #NIX_DEBUG = 1;
   buildInputs = [ ]; #strace gdb;
-
+  # NODES requires access to /sys/devices to request NUMA information. It will
-  # NODES requires access to /sys/devices to request NUMA information
+  # fail to run otherwise, so we disable the sandbox for this test.
-  requiredSystemFeatures = [ "sys-devices" ];
+  __noChroot = true;
-
   buildPhase = ''
     set -x
     #$CC -v