Remove unneeded flake inputs

doc/maintainers.md

@@ -1,30 +0,0 @@
-# Maintainers
-
-## Role of a maintainer
-The responsibilities of maintainers are quite lax, and similar in spirit to
-[nixpkgs' maintainers][1]:
-
-    The main responsibility of a maintainer is to keep the packages they
-    maintain in a functioning state, and keep up with updates. In order to do
-    that, they are empowered to make decisions over the packages they maintain.
-
-    That being said, the maintainer is not alone in proposing changes to the
-    packages. Anybody (both bots and humans) can send PRs to bump or tweak the
-    package.
-
-In practice, this means that when updating or proposing changes to a package,
-we will notify maintainers by mentioning them in Gitea so they can test changes
-and give feedback.
-
-Since we do bi-yearly release cycles, there is no expectation from maintainers
-to update packages at each upstream release. Nevertheless, on each release cycle
-we may request help from maintainers when updating or testing their packages.
-
-## Becoming a maintainer
-
-
-You'll have to add yourself in the `maintainers.nix` list; your username should
-match your `bsc.es` email. Then you can add yourself to the `meta.maintainers`
-of any package you are interested in maintaining.
-
-[1]: [https://github.com/NixOS/nixpkgs/tree/nixos-25.05/maintainers]

flake.lock

@@ -1,25 +1,64 @@
 {
   "nodes": {
+    "agenix": {
+      "inputs": {
+        "darwin": [],
+        "home-manager": [],
+        "nixpkgs": [
+          "nixpkgs"
+        ],
+        "systems": [
+          "systems"
+        ]
+      },
+      "locked": {
+        "lastModified": 1750173260,
+        "narHash": "sha256-9P1FziAwl5+3edkfFcr5HeGtQUtrSdk/MksX39GieoA=",
+        "owner": "ryantm",
+        "repo": "agenix",
+        "rev": "531beac616433bac6f9e2a19feb8e99a22a66baf",
+        "type": "github"
+      },
+      "original": {
+        "owner": "ryantm",
+        "repo": "agenix",
+        "type": "github"
+      }
+    },
     "nixpkgs": {
       "locked": {
-        "lastModified": 1764522689,
+        "lastModified": 1752436162,
-        "narHash": "sha256-SqUuBFjhl/kpDiVaKLQBoD8TLD+/cTUzzgVFoaHrkqY=",
+        "narHash": "sha256-Kt1UIPi7kZqkSc5HVj6UY5YLHHEzPBkgpNUByuyxtlw=",
         "owner": "NixOS",
         "repo": "nixpkgs",
-        "rev": "8bb5646e0bed5dbd3ab08c7a7cc15b75ab4e1d0f",
+        "rev": "dfcd5b901dbab46c9c6e80b265648481aafb01f8",
         "type": "github"
       },
       "original": {
         "owner": "NixOS",
-        "ref": "nixos-25.11",
+        "ref": "nixos-25.05",
         "repo": "nixpkgs",
         "type": "github"
       }
     },
     "root": {
       "inputs": {
-        "nixpkgs": "nixpkgs"
+        "agenix": "agenix",
+        "nixpkgs": "nixpkgs",
+        "systems": "systems"
       }
+    },
+    "systems": {
+      "flake": false,
+      "locked": {
+        "path": "./pkgs/systems.nix",
+        "type": "path"
+      },
+      "original": {
+        "path": "./pkgs/systems.nix",
+        "type": "path"
+      },
+      "parent": []
     }
   },
   "root": "root",

flake.nix

@@ -1,13 +1,22 @@
 {
   inputs = {
-    nixpkgs.url = "github:NixOS/nixpkgs/nixos-25.11";
+    nixpkgs.url = "github:NixOS/nixpkgs/nixos-25.05";
+
+    systems.url = "path:./pkgs/systems.nix";
+    systems.flake = false;
+
+    agenix.url = "github:ryantm/agenix";
+    agenix.inputs.nixpkgs.follows = "nixpkgs";
+    agenix.inputs.systems.follows = "systems";
+    agenix.inputs.darwin.follows = "";
+    agenix.inputs.home-manager.follows = "";
   };
 
-  outputs = { self, nixpkgs, ... }:
+  outputs = { self, nixpkgs, agenix, ... }:
 let
   mkConf = name: nixpkgs.lib.nixosSystem {
     system = "x86_64-linux";
-    specialArgs = { inherit nixpkgs; theFlake = self; };
+    specialArgs = { inherit nixpkgs agenix; theFlake = self; };
     modules = [ "${self.outPath}/m/${name}/configuration.nix" ];
   };
   # For now we only support x86
@@ -43,10 +52,6 @@ in
     hydraJobs = self.legacyPackages.${system}.bsc.hydraJobs;
 
     # propagate nixpkgs lib, so we can do bscpkgs.lib
-    lib = nixpkgs.lib // {
+    inherit (nixpkgs) lib;
-      maintainers = nixpkgs.lib.maintainers // {
-        bsc = import ./pkgs/maintainers.nix;
-      };
-    };
   };
 }

m/common/base.nix

@@ -7,7 +7,6 @@
     ./base/august-shutdown.nix
     ./base/boot.nix
     ./base/env.nix
-    ./base/fish.nix
     ./base/fs.nix
     ./base/hw.nix
     ./base/net.nix

m/common/base/agenix.nix

@@ -1,8 +1,9 @@
-{ pkgs, ... }:
+{ agenix, ... }:
 
 {
-  imports = [ ../../module/agenix.nix ];
+  imports = [ agenix.nixosModules.default ];
 
-  # Add agenix to system packages
+  environment.systemPackages = [
-  environment.systemPackages = [ pkgs.agenix ];
+    agenix.packages.x86_64-linux.default
+  ];
 }

m/common/base/env.nix

@@ -1,14 +1,12 @@
-{ pkgs, ... }:
+{ pkgs, config, ... }:
 
 {
   environment.systemPackages = with pkgs; [
     vim wget git htop tmux pciutils tcpdump ripgrep nix-index nixos-option
     nix-diff ipmitool freeipmi ethtool lm_sensors cmake gnumake file tree
-    ncdu perf ldns pv
+    ncdu config.boot.kernelPackages.perf ldns pv
-    nix-output-monitor
+    # From bsckgs overlay
-    nixfmt-tree
+    osumb
-    # From jungle overlay
-    osumb nixgen
   ];
 
   programs.direnv.enable = true;
@@ -30,21 +28,8 @@
     VISUAL = "vim";
   };
 
-  programs.bash.promptInit = # bash
+  programs.bash.promptInit = ''
-    ''
-      if echo "$PATH" | grep -qc '/nix/store'; then
-        # Inside a nix shell, dumb prompt
     PS1="\h\\$ "
-      elif [ "$TERM" != "dumb" ] ; then
-        PROMPT_COLOR="1;31m"
-        ((UID)) && PROMPT_COLOR="1;32m"
-
-        PS1="\n\[\033[$PROMPT_COLOR\][\[\e]0;\u@\h: \w\a\]\u@\h:\w]\\$\[\033[0m\] "
-
-        if test "$TERM" = "xterm"; then
-          PS1="\[\033]2;\h:\u:\w\007\]$PS1"
-        fi
-      fi
   '';
 
   time.timeZone = "Europe/Madrid";

m/common/base/fish.nix

@@ -1,3 +0,0 @@
-{
-  programs.fish.enable = true;
-}

m/common/base/users.nix

@@ -87,13 +87,6 @@
         openssh.authorizedKeys.keys = [
           "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIIIFiqXqt88VuUfyANkZyLJNiuroIITaGlOOTMhVDKjf abonerib@bsc"
         ];
-        shell = pkgs.fish;
-        packages = with pkgs; [
-          fzf
-          jujutsu
-          neovim
-          starship
-        ];
       };
 
       vlopez = {
@@ -187,19 +180,6 @@
           "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIFmMqKqPg4uocNOr3O41kLbZMOMJn3m2ZdN1JvTR96z3 bsccns@arnau-bsc"
         ];
       };
-
-      aaguirre = {
-        uid = 9655;
-        isNormalUser = true;
-        home = "/home/Computational/aaguirre";
-        description = "Alejandro Aguirre";
-        group = "Computational";
-        hosts = [ "apex" "hut" ];
-        hashedPassword = "$6$TXRXQT6jjBvxkxU6$E.sh5KspAm1qeG5Ct7OPHpo8REmbGDwjFGvqeGgTVz3GASGOAnPL7UMZsMAsAKBoahOw.v8LNno6XGrTEPzZH1";
-        openssh.authorizedKeys.keys = [
-          "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIOlRX7ZCnqtUJYCxKgWmgSrFCYuA2LHY96rVwqxXPl86 aaguirre@BSC-8488184117"
-        ];
-      };
     };
 
     groups = {

m/common/base/watchdog.nix

@@ -5,5 +5,5 @@
   boot.kernelModules = [ "ipmi_watchdog" ];
 
   # Enable systemd watchdog with 30 s interval
-  systemd.settings.Manager.RuntimeWatchdogSec = 30;
+  systemd.watchdog.runtimeTime = "30s";
 }

m/fox/configuration.nix

@@ -93,4 +93,20 @@
     wantedBy = [ "multi-user.target" ];
     serviceConfig.ExecStart = script;
   };
+
+  # Only allow SSH connections from users who have a SLURM allocation
+  # See: https://slurm.schedmd.com/pam_slurm_adopt.html
+  security.pam.services.sshd.rules.account.slurm = {
+    control = "required";
+    enable = true;
+    modulePath = "${pkgs.slurm}/lib/security/pam_slurm_adopt.so";
+    args = [ "log_level=debug5" ];
+    order = 999999; # Make it last one
+  };
+
+  # Disable systemd session (pam_systemd.so) as it will conflict with the
+  # pam_slurm_adopt.so module. What happens is that the shell is first adopted
+  # into the slurmstepd task and then into the systemd session, which is not
+  # what we want, otherwise it will linger even if all jobs are gone.
+  security.pam.services.sshd.startSession = lib.mkForce false;
 }

m/hut/configuration.nix

@@ -17,7 +17,6 @@
     ./postgresql.nix
     ./nginx.nix
     ./p.nix
-    ./ompss2-timer.nix
     #./pxe.nix
   ];
 

m/hut/gitea.nix

@@ -29,9 +29,6 @@
     };
   };
 
-  # Allow gitea user to send mail
-  users.users.gitea.extraGroups = [ "mail-robot" ];
-
   services.gitea-actions-runner.instances = {
     runrun = {
       enable = true;

m/hut/msmtp.nix

@@ -1,11 +1,8 @@
 { config, lib, ... }:
 {
-  # Robot user that can see the password to send mail from jungle-robot
-  users.groups.mail-robot = {};
-
   age.secrets.jungleRobotPassword = {
     file = ../../secrets/jungle-robot-password.age;
-    group = "mail-robot";
+    group = "gitea";
     mode = "440";
   };
 

m/hut/nginx.nix

@@ -4,8 +4,8 @@ let
     name = "jungle-web";
     src = pkgs.fetchgit {
       url = "https://jungle.bsc.es/git/rarias/jungle-website.git";
-      rev = "52abaf4d71652a9ef77a0b098db14ca33bffff4c";
+      rev = "739bf0175a7f05380fe7ad7023ff1d60db1710e1";
-      hash = "sha256-/ul9GazbOrOkmlvSgDz/+2W+V+ir5725Y7mVLc3rb0M=";
+      hash = "sha256-ea5DzhYTzZ9TmqD+x95rdNdLbxPnBluqlYH2NmBYmc4=";
     };
     buildInputs = [ pkgs.hugo ];
     buildPhase = ''

m/hut/ompss2-timer.nix

@@ -1,85 +0,0 @@
-{ config, pkgs, ... }:
-{
-  systemd.timers = {
-    "ompss2-closing" = {
-      wantedBy = [ "timers.target" ];
-      timerConfig = {
-        Unit = "ompss2-closing.service";
-        OnCalendar = [ "*-03-15 07:00:00" "*-09-15 07:00:00"];
-      };
-    };
-    "ompss2-freeze" = {
-      wantedBy = [ "timers.target" ];
-      timerConfig = {
-        Unit = "ompss2-freeze.service";
-        OnCalendar = [ "*-04-15 07:00:00" "*-10-15 07:00:00" ];
-      };
-    };
-    "ompss2-release" = {
-      wantedBy = [ "timers.target" ];
-      timerConfig = {
-        Unit = "ompss2-release.service";
-        OnCalendar = [ "*-05-15 07:00:00" "*-11-15 07:00:00" ];
-      };
-    };
-  };
-
-  systemd.services =
-  let
-    closing = pkgs.writeText "closing.txt"
-    ''
-      Subject: OmpSs-2 release enters closing period
-
-      Hi,
-
-      You have one month to merge the remaining features for the next OmpSs-2
-      release. Please, identify what needs to be merged and discuss it in the next
-      OmpSs-2 meeting.
-
-      Thanks!,
-      Jungle robot
-    '';
-    freeze = pkgs.writeText "freeze.txt"
-    ''
-      Subject: OmpSs-2 release enters freeze period
-
-      Hi,
-
-      The period to introduce new features or breaking changes is over, only bug
-      fixes are allowed now. During this time, please prepare the release notes
-      to be included in the next OmpSs-2 release.
-
-      Thanks!,
-      Jungle robot
-    '';
-    release = pkgs.writeText "release.txt"
-    ''
-      Subject: OmpSs-2 release now
-
-      Hi,
-
-      The period to introduce bug fixes is now over. Please, proceed to do the
-      OmpSs-2 release.
-
-      Thanks!,
-      Jungle robot
-    '';
-    mkServ = name: mail: {
-      "ompss2-${name}" = {
-        script = ''
-          set -eu
-          set -o pipefail
-          cat ${mail} | ${config.security.wrapperDir}/sendmail star@bsc.es
-        '';
-        serviceConfig = {
-          Type = "oneshot";
-          DynamicUser = true;
-          Group = "mail-robot";
-        };
-      };
-    };
-  in
-    (mkServ "closing" closing) //
-    (mkServ "freeze" freeze) //
-    (mkServ "release" release);
-}

m/module/agenix.nix

@@ -1,357 +0,0 @@
-{
-  config,
-  options,
-  lib,
-  pkgs,
-  ...
-}:
-with lib;
-let
-  cfg = config.age;
-
-  isDarwin = lib.attrsets.hasAttrByPath [ "environment" "darwinConfig" ] options;
-
-  ageBin = config.age.ageBin;
-
-  users = config.users.users;
-
-  sysusersEnabled =
-    if isDarwin then
-      false
-    else
-      options.systemd ? sysusers && (config.systemd.sysusers.enable || config.services.userborn.enable);
-
-  mountCommand =
-    if isDarwin then
-      ''
-        if ! diskutil info "${cfg.secretsMountPoint}" &> /dev/null; then
-            num_sectors=1048576
-            dev=$(hdiutil attach -nomount ram://"$num_sectors" | sed 's/[[:space:]]*$//')
-            newfs_hfs -v agenix "$dev"
-            mount -t hfs -o nobrowse,nodev,nosuid,-m=0751 "$dev" "${cfg.secretsMountPoint}"
-        fi
-      ''
-    else
-      ''
-        grep -q "${cfg.secretsMountPoint} ramfs" /proc/mounts ||
-          mount -t ramfs none "${cfg.secretsMountPoint}" -o nodev,nosuid,mode=0751
-      '';
-  newGeneration = ''
-    _agenix_generation="$(basename "$(readlink ${cfg.secretsDir})" || echo 0)"
-    (( ++_agenix_generation ))
-    echo "[agenix] creating new generation in ${cfg.secretsMountPoint}/$_agenix_generation"
-    mkdir -p "${cfg.secretsMountPoint}"
-    chmod 0751 "${cfg.secretsMountPoint}"
-    ${mountCommand}
-    mkdir -p "${cfg.secretsMountPoint}/$_agenix_generation"
-    chmod 0751 "${cfg.secretsMountPoint}/$_agenix_generation"
-  '';
-
-  chownGroup = if isDarwin then "admin" else "keys";
-  # chown the secrets mountpoint and the current generation to the keys group
-  # instead of leaving it root:root.
-  chownMountPoint = ''
-    chown :${chownGroup} "${cfg.secretsMountPoint}" "${cfg.secretsMountPoint}/$_agenix_generation"
-  '';
-
-  setTruePath = secretType: ''
-    ${
-      if secretType.symlink then
-        ''
-          _truePath="${cfg.secretsMountPoint}/$_agenix_generation/${secretType.name}"
-        ''
-      else
-        ''
-          _truePath="${secretType.path}"
-        ''
-    }
-  '';
-
-  installSecret = secretType: ''
-    ${setTruePath secretType}
-    echo "decrypting '${secretType.file}' to '$_truePath'..."
-    TMP_FILE="$_truePath.tmp"
-
-    IDENTITIES=()
-    for identity in ${toString cfg.identityPaths}; do
-      test -r "$identity" || continue
-      test -s "$identity" || continue
-      IDENTITIES+=(-i)
-      IDENTITIES+=("$identity")
-    done
-
-    test "''${#IDENTITIES[@]}" -eq 0 && echo "[agenix] WARNING: no readable identities found!"
-
-    mkdir -p "$(dirname "$_truePath")"
-    [ "${secretType.path}" != "${cfg.secretsDir}/${secretType.name}" ] && mkdir -p "$(dirname "${secretType.path}")"
-    (
-      umask u=r,g=,o=
-      test -f "${secretType.file}" || echo '[agenix] WARNING: encrypted file ${secretType.file} does not exist!'
-      test -d "$(dirname "$TMP_FILE")" || echo "[agenix] WARNING: $(dirname "$TMP_FILE") does not exist!"
-      LANG=${
-        config.i18n.defaultLocale or "C"
-      } ${ageBin} --decrypt "''${IDENTITIES[@]}" -o "$TMP_FILE" "${secretType.file}"
-    )
-    chmod ${secretType.mode} "$TMP_FILE"
-    mv -f "$TMP_FILE" "$_truePath"
-
-    ${optionalString secretType.symlink ''
-      [ "${secretType.path}" != "${cfg.secretsDir}/${secretType.name}" ] && ln -sfT "${cfg.secretsDir}/${secretType.name}" "${secretType.path}"
-    ''}
-  '';
-
-  testIdentities = map (path: ''
-    test -f ${path} || echo '[agenix] WARNING: config.age.identityPaths entry ${path} not present!'
-  '') cfg.identityPaths;
-
-  cleanupAndLink = ''
-    _agenix_generation="$(basename "$(readlink ${cfg.secretsDir})" || echo 0)"
-    (( ++_agenix_generation ))
-    echo "[agenix] symlinking new secrets to ${cfg.secretsDir} (generation $_agenix_generation)..."
-    ln -sfT "${cfg.secretsMountPoint}/$_agenix_generation" ${cfg.secretsDir}
-
-    (( _agenix_generation > 1 )) && {
-    echo "[agenix] removing old secrets (generation $(( _agenix_generation - 1 )))..."
-    rm -rf "${cfg.secretsMountPoint}/$(( _agenix_generation - 1 ))"
-    }
-  '';
-
-  installSecrets = builtins.concatStringsSep "\n" (
-    [ "echo '[agenix] decrypting secrets...'" ]
-    ++ testIdentities
-    ++ (map installSecret (builtins.attrValues cfg.secrets))
-    ++ [ cleanupAndLink ]
-  );
-
-  chownSecret = secretType: ''
-    ${setTruePath secretType}
-    chown ${secretType.owner}:${secretType.group} "$_truePath"
-  '';
-
-  chownSecrets = builtins.concatStringsSep "\n" (
-    [ "echo '[agenix] chowning...'" ]
-    ++ [ chownMountPoint ]
-    ++ (map chownSecret (builtins.attrValues cfg.secrets))
-  );
-
-  secretType = types.submodule (
-    { config, ... }:
-    {
-      options = {
-        name = mkOption {
-          type = types.str;
-          default = config._module.args.name;
-          defaultText = literalExpression "config._module.args.name";
-          description = ''
-            Name of the file used in {option}`age.secretsDir`
-          '';
-        };
-        file = mkOption {
-          type = types.path;
-          description = ''
-            Age file the secret is loaded from.
-          '';
-        };
-        path = mkOption {
-          type = types.str;
-          default = "${cfg.secretsDir}/${config.name}";
-          defaultText = literalExpression ''
-            "''${cfg.secretsDir}/''${config.name}"
-          '';
-          description = ''
-            Path where the decrypted secret is installed.
-          '';
-        };
-        mode = mkOption {
-          type = types.str;
-          default = "0400";
-          description = ''
-            Permissions mode of the decrypted secret in a format understood by chmod.
-          '';
-        };
-        owner = mkOption {
-          type = types.str;
-          default = "0";
-          description = ''
-            User of the decrypted secret.
-          '';
-        };
-        group = mkOption {
-          type = types.str;
-          default = users.${config.owner}.group or "0";
-          defaultText = literalExpression ''
-            users.''${config.owner}.group or "0"
-          '';
-          description = ''
-            Group of the decrypted secret.
-          '';
-        };
-        symlink = mkEnableOption "symlinking secrets to their destination" // {
-          default = true;
-        };
-      };
-    }
-  );
-in
-{
-  imports = [
-    (mkRenamedOptionModule [ "age" "sshKeyPaths" ] [ "age" "identityPaths" ])
-  ];
-
-  options.age = {
-    ageBin = mkOption {
-      type = types.str;
-      default = "${pkgs.age}/bin/age";
-      defaultText = literalExpression ''
-        "''${pkgs.age}/bin/age"
-      '';
-      description = ''
-        The age executable to use.
-      '';
-    };
-    secrets = mkOption {
-      type = types.attrsOf secretType;
-      default = { };
-      description = ''
-        Attrset of secrets.
-      '';
-    };
-    secretsDir = mkOption {
-      type = types.path;
-      default = "/run/agenix";
-      description = ''
-        Folder where secrets are symlinked to
-      '';
-    };
-    secretsMountPoint = mkOption {
-      type =
-        types.addCheck types.str (
-          s:
-          (builtins.match "[ \t\n]*" s) == null # non-empty
-          && (builtins.match ".+/" s) == null
-        ) # without trailing slash
-        // {
-          description = "${types.str.description} (with check: non-empty without trailing slash)";
-        };
-      default = "/run/agenix.d";
-      description = ''
-        Where secrets are created before they are symlinked to {option}`age.secretsDir`
-      '';
-    };
-    identityPaths = mkOption {
-      type = types.listOf types.path;
-      default =
-        if isDarwin then
-          [
-            "/etc/ssh/ssh_host_ed25519_key"
-            "/etc/ssh/ssh_host_rsa_key"
-          ]
-        else if (config.services.openssh.enable or false) then
-          map (e: e.path) (
-            lib.filter (e: e.type == "rsa" || e.type == "ed25519") config.services.openssh.hostKeys
-          )
-        else
-          [ ];
-      defaultText = literalExpression ''
-        if isDarwin
-        then [
-          "/etc/ssh/ssh_host_ed25519_key"
-          "/etc/ssh/ssh_host_rsa_key"
-        ]
-        else if (config.services.openssh.enable or false)
-        then map (e: e.path) (lib.filter (e: e.type == "rsa" || e.type == "ed25519") config.services.openssh.hostKeys)
-        else [];
-      '';
-      description = ''
-        Path to SSH keys to be used as identities in age decryption.
-      '';
-    };
-  };
-
-  config = mkIf (cfg.secrets != { }) (mkMerge [
-    {
-      assertions = [
-        {
-          assertion = cfg.identityPaths != [ ];
-          message = "age.identityPaths must be set, for example by enabling openssh.";
-        }
-      ];
-    }
-    (optionalAttrs (!isDarwin) {
-      # When using sysusers we no longer be started as an activation script
-      # because those are started in initrd while sysusers is started later.
-      systemd.services.agenix-install-secrets = mkIf sysusersEnabled {
-        wantedBy = [ "sysinit.target" ];
-        after = [ "systemd-sysusers.service" ];
-        unitConfig.DefaultDependencies = "no";
-
-        path = [ pkgs.mount ];
-        serviceConfig = {
-          Type = "oneshot";
-          ExecStart = pkgs.writeShellScript "agenix-install" (concatLines [
-            newGeneration
-            installSecrets
-            chownSecrets
-          ]);
-          RemainAfterExit = true;
-        };
-      };
-
-      # Create a new directory full of secrets for symlinking (this helps
-      # ensure removed secrets are actually removed, or at least become
-      # invalid symlinks).
-      system.activationScripts = mkIf (!sysusersEnabled) {
-        agenixNewGeneration = {
-          text = newGeneration;
-          deps = [
-            "specialfs"
-          ];
-        };
-
-        agenixInstall = {
-          text = installSecrets;
-          deps = [
-            "agenixNewGeneration"
-            "specialfs"
-          ];
-        };
-
-        # So user passwords can be encrypted.
-        users.deps = [ "agenixInstall" ];
-
-        # Change ownership and group after users and groups are made.
-        agenixChown = {
-          text = chownSecrets;
-          deps = [
-            "users"
-            "groups"
-          ];
-        };
-
-        # So other activation scripts can depend on agenix being done.
-        agenix = {
-          text = "";
-          deps = [ "agenixChown" ];
-        };
-      };
-    })
-
-    (optionalAttrs isDarwin {
-      launchd.daemons.activate-agenix = {
-        script = ''
-          set -e
-          set -o pipefail
-          export PATH="${pkgs.gnugrep}/bin:${pkgs.coreutils}/bin:@out@/sw/bin:/usr/bin:/bin:/usr/sbin:/sbin"
-          ${newGeneration}
-          ${installSecrets}
-          ${chownSecrets}
-          exit 0
-        '';
-        serviceConfig = {
-          RunAtLoad = true;
-          KeepAlive.SuccessfulExit = false;
-        };
-      };
-    })
-  ]);
-}

m/module/debuginfod.nix

@@ -1,10 +1,3 @@
 {
-  services.nixseparatedebuginfod2 = {
+  services.nixseparatedebuginfod.enable = true;
-    enable = true;
-    substituters = [
-      "local:"
-      "https://cache.nixos.org"
-      "http://hut/cache"
-    ];
-  };
 }

m/module/slurm-client.nix

@@ -1,4 +1,4 @@
-{ lib, pkgs, ... }:
+{ lib, ... }:
 
 {
   imports = [
@@ -21,20 +21,4 @@
   };
 
   services.slurm.client.enable = true;
-
-  # Only allow SSH connections from users who have a SLURM allocation
-  # See: https://slurm.schedmd.com/pam_slurm_adopt.html
-  security.pam.services.sshd.rules.account.slurm = {
-    control = "required";
-    enable = true;
-    modulePath = "${pkgs.slurm}/lib/security/pam_slurm_adopt.so";
-    args = [ "log_level=debug5" ];
-    order = 999999; # Make it last one
-  };
-
-  # Disable systemd session (pam_systemd.so) as it will conflict with the
-  # pam_slurm_adopt.so module. What happens is that the shell is first adopted
-  # into the slurmstepd task and then into the systemd session, which is not
-  # what we want, otherwise it will linger even if all jobs are gone.
-  security.pam.services.sshd.startSession = lib.mkForce false;
 }

m/module/slurm-common.nix

@@ -1,6 +1,31 @@
 { config, pkgs, ... }:
 
-{
+let
+  suspendProgram = pkgs.writeShellScript "suspend.sh" ''
+    exec 1>>/var/log/power_save.log 2>>/var/log/power_save.log
+    set -x
+    export "PATH=/run/current-system/sw/bin:$PATH"
+    echo "$(date) Suspend invoked $0 $*" >> /var/log/power_save.log
+    hosts=$(scontrol show hostnames $1)
+    for host in $hosts; do
+      echo Shutting down host: $host
+      ipmitool -I lanplus -H ''${host}-ipmi -P "" -U "" chassis power off
+    done
+  '';
+
+  resumeProgram = pkgs.writeShellScript "resume.sh" ''
+    exec 1>>/var/log/power_save.log 2>>/var/log/power_save.log
+    set -x
+    export "PATH=/run/current-system/sw/bin:$PATH"
+    echo "$(date) Suspend invoked $0 $*" >> /var/log/power_save.log
+    hosts=$(scontrol show hostnames $1)
+    for host in $hosts; do
+      echo Starting host: $host
+      ipmitool -I lanplus -H ''${host}-ipmi -P "" -U "" chassis power on
+    done
+  '';
+
+in {
   services.slurm = {
     controlMachine = "apex";
     clusterName = "jungle";
@@ -34,6 +59,16 @@
       # the resources. Use the task/cgroup plugin to enable process containment.
       TaskPlugin=task/affinity,task/cgroup
 
+      # Power off unused nodes until they are requested
+      SuspendProgram=${suspendProgram}
+      SuspendTimeout=60
+      ResumeProgram=${resumeProgram}
+      ResumeTimeout=300
+      SuspendExcNodes=fox
+
+      # Turn the nodes off after 1 hour of inactivity
+      SuspendTime=3600
+
       # Reduce port range so we can allow only this range in the firewall
       SrunPortRange=60000-61000
 
@@ -51,7 +86,9 @@
       # when a task runs (srun) so we can ssh early.
       PrologFlags=Alloc,Contain,X11
 
-      LaunchParameters=use_interactive_step
+      # LaunchParameters=ulimit_pam_adopt will set RLIMIT_RSS in processes
+      # adopted by the external step, similar to tasks running in regular steps
+      # LaunchParameters=ulimit_pam_adopt
       SlurmdDebug=debug5
       #DebugFlags=Protocol,Cgroup
     '';

m/tent/nginx.nix

@@ -4,8 +4,8 @@ let
     name = "jungle-web";
     src = pkgs.fetchgit {
       url = "https://jungle.bsc.es/git/rarias/jungle-website.git";
-      rev = "52abaf4d71652a9ef77a0b098db14ca33bffff4c";
+      rev = "739bf0175a7f05380fe7ad7023ff1d60db1710e1";
-      hash = "sha256-/ul9GazbOrOkmlvSgDz/+2W+V+ir5725Y7mVLc3rb0M=";
+      hash = "sha256-ea5DzhYTzZ9TmqD+x95rdNdLbxPnBluqlYH2NmBYmc4=";
     };
     buildInputs = [ pkgs.hugo ];
     buildPhase = ''

m/weasel/configuration.nix

@@ -1,10 +1,9 @@
-{ lib, pkgs, ... }:
+{ lib, ... }:
 
 {
   imports = [
     ../common/ssf.nix
     ../module/hut-substituter.nix
-    ./hydra.nix
   ];
 
   # Select this using the ID to avoid mismatches
@@ -31,22 +30,4 @@
       prefixLength = 24;
     } ];
   };
-
-  services.nix-serve = {
-    enable = true;
-    bindAddress = "0.0.0.0";
-    port = 5000;
-    package = pkgs.haskell.lib.overrideSrc (pkgs.haskell.packages.ghc96.nix-serve-ng.override { nix = pkgs.nixVersions.nix_2_28; }) {
-      src = pkgs.fetchgit {
-        url = "https://jungle.bsc.es/git/abonerib/nix-serve-ng.git";
-        rev = "9c056641300a826db66b66d7e584b2541d38927a";
-        hash = "sha256-y69ZchFiZOU71eyeljcQgLxkLk5JUzZfanq8Yzw4MkI=";
-      };
-      version = "unstable";
-    };
-
-    secretKeyFile = "/var/cache-priv-key.pem";
-    # Public key:
-    # 10.0.40.6:8jBhIdXEBap+Qo+vc1/fnV9vj43A2oDk839EEheRr/U=
-  };
 }

m/weasel/hydra.nix

@@ -1,57 +0,0 @@
-{
-  config,
-  pkgs,
-  lib,
-  ...
-}:
-{
-  services.hydra = {
-    enable = true;
-
-    # Wrap hydra so it puts quiet flag every time... This is dumb and annoying,
-    # but i can't override the systemd ExecStart without running into infinite
-    # recursion.
-    package = pkgs.symlinkJoin {
-      name = "hydra-quiet";
-      paths = [ pkgs.hydra ];
-      postBuild = ''
-        for prog in hydra-queue-runner hydra-evaluator ; do
-          prev=$(realpath $out/bin/$prog)
-          rm $out/bin/$prog
-          cat >$out/bin/$prog <<EOF
-        #!/bin/sh
-        args=()
-        for arg in "\$@"; do
-          if [ "\$arg" != "-v" ]; then
-            args+=("\$arg")
-          fi
-        done
-        exec $prev --quiet "\''${args[@]}"
-        EOF
-
-          chmod +x $out/bin/$prog
-        done
-      '';
-    };
-
-    hydraURL = "http://localhost:3001"; # externally visible URL
-    notificationSender = "hydra@jungle.bsc.es"; # e-mail of Hydra service
-    port = 3001;
-    # a standalone Hydra will require you to unset the buildMachinesFiles list to avoid using a nonexistant /etc/nix/machines
-    buildMachinesFiles = [ ];
-    # you will probably also want, otherwise *everything* will be built from scratch
-    useSubstitutes = true;
-    listenHost = "0.0.0.0"; # Force IPv4
-  };
-
-  systemd.services.hydra-send-stats.enable = lib.mkForce false;
-
-  networking.firewall.allowedTCPPorts = [ config.services.hydra.port ];
-
-  nix.settings.extra-allowed-uris = [
-    "git+ssh://git@bscpm04.bsc.es"
-    "git+ssh://git@gitlab-internal.bsc.es"
-    "https://github.com"
-    "git+ssh://github.com"
-  ];
-}

overlay.nix

@@ -7,11 +7,7 @@ let
   callPackage = final.callPackage;
 
   bscPkgs = {
-    agenix = prev.callPackage ./pkgs/agenix/default.nix { };
     amd-uprof = prev.callPackage ./pkgs/amd-uprof/default.nix { };
-    aoccUnwrapped = callPackage ./pkgs/aocc/unwrapped.nix { };
-    aocc = callPackage ./pkgs/aocc/default.nix { };
-    stdenvAocc = final.overrideCC final.stdenv final.aocc;
     bench6 = callPackage ./pkgs/bench6/default.nix { };
     bigotes = callPackage ./pkgs/bigotes/default.nix { };
     clangOmpss2 = callPackage ./pkgs/llvm-ompss2/default.nix { };
@@ -22,12 +18,7 @@ let
     cudainfo = prev.callPackage ./pkgs/cudainfo/default.nix { };
     #extrae = callPackage ./pkgs/extrae/default.nix { }; # Broken and outdated
     gpi-2 = callPackage ./pkgs/gpi-2/default.nix { };
-    gromacs = callPackage ./pkgs/gromacs/default.nix { enableSYCL = true; };
-    intel-apt = callPackage ./pkgs/intel-oneapi/packages.nix { };
     intelPackages_2023 = callPackage ./pkgs/intel-oneapi/2023.nix { };
-    intelPackages_2024 = final.intel-apt.hpckit_2024;
-    intelPackages_2025 = final.intel-apt.hpckit_2025;
-    intelPackages = final.intelPackages_2025;
     jemallocNanos6 = callPackage ./pkgs/nanos6/jemalloc.nix { };
     # FIXME: Extend this to all linuxPackages variants. Open problem, see:
     # https://discourse.nixos.org/t/whats-the-right-way-to-make-a-custom-kernel-module-available/4636
@@ -37,45 +28,28 @@ let
     linuxPackages_latest = prev.linuxPackages_latest.extend(_final: _prev: {
       amd-uprof-driver = _prev.callPackage ./pkgs/amd-uprof/driver.nix { };
     });
-    llvm-intel = callPackage ./pkgs/llvm-intel/default.nix { };
     lmbench = callPackage ./pkgs/lmbench/default.nix { };
-    # Broken and unmantained
+    mcxx = callPackage ./pkgs/mcxx/default.nix { };
-    # mcxx = callPackage ./pkgs/mcxx/default.nix { };
     meteocat-exporter = prev.callPackage ./pkgs/meteocat-exporter/default.nix { };
     mpi = final.mpich; # Set MPICH as default
     mpich = callPackage ./pkgs/mpich/default.nix { mpich = prev.mpich; };
     nanos6 = callPackage ./pkgs/nanos6/default.nix { };
     nanos6Debug = final.nanos6.override { enableDebug = true; };
     nixtools = callPackage ./pkgs/nixtools/default.nix { };
-    nixgen = callPackage ./pkgs/nixgen/default.nix { };
     # Broken because of pkgsStatic.libcap
     # See: https://github.com/NixOS/nixpkgs/pull/268791
     #nix-wrap = callPackage ./pkgs/nix-wrap/default.nix { };
     nodes = callPackage ./pkgs/nodes/default.nix { };
     nosv = callPackage ./pkgs/nosv/default.nix { };
-    oneMath = callPackage ./pkgs/onemath/default.nix { };
     openmp = callPackage ./pkgs/llvm-ompss2/openmp.nix { monorepoSrc = final.clangOmpss2Unwrapped.src; version = final.clangOmpss2Unwrapped.version; };
     openmpv = final.openmp.override { enableNosv = true; enableOvni = true; };
     osumb = callPackage ./pkgs/osu/default.nix { };
     ovni = callPackage ./pkgs/ovni/default.nix { };
     ovniGit = final.ovni.override { useGit = true; };
-    papi = callPackage ./pkgs/papi/default.nix { papi = prev.papi; };
     paraverKernel = callPackage ./pkgs/paraver/kernel.nix { };
-    pertalde = callPackage ./pkgs/pertalde/default.nix { };
-    pocl = callPackage ./pkgs/pocl/default.nix { };
-    pocl-unpublished = callPackage ./pkgs/pocl/default.nix {
-      gitUrl = "git@github.com:pocl/unpublished.git";
-      gitBranch = "loopvec-next";
-      gitCommit = "74f7e2b5644b1c5598205c8cac1914bb4c5dadec";
-      enableNOSV = false;
-      enableOVNI = false;
-    };
-    pocl-noicd = callPackage ./pkgs/pocl/default.nix { enableICD = false; };
     prometheus-slurm-exporter = prev.callPackage ./pkgs/slurm-exporter/default.nix { };
     #pscom = callPackage ./pkgs/parastation/pscom.nix { }; # Unmaintaned
     #psmpi = callPackage ./pkgs/parastation/psmpi.nix { }; # Unmaintaned
-    rodinia = callPackage ./pkgs/rodinia/default.nix { };
-    slurm = import ./pkgs/slurm/default.nix { slurm = prev.slurm; };
     sonar = callPackage ./pkgs/sonar/default.nix { };
     stdenvClangOmpss2 = final.stdenv.override { cc = final.clangOmpss2; allowedRequisites = null; };
     stdenvClangOmpss2Nanos6 = final.stdenv.override { cc = final.clangOmpss2Nanos6; allowedRequisites = null; };
@@ -83,18 +57,8 @@ let
     stdenvClangOmpss2NodesOmpv = final.stdenv.override { cc = final.clangOmpss2NodesOmpv; allowedRequisites = null; };
     tagaspi = callPackage ./pkgs/tagaspi/default.nix { };
     tampi = callPackage ./pkgs/tampi/default.nix { };
-    tasycl = callPackage ./pkgs/tasycl/default.nix { };
-    tasycl-acpp = callPackage ./pkgs/tasycl/default.nix { useIntel = false; };
-    unified-runtime = callPackage ./pkgs/unified-runtime/default.nix { };
     upc-qaire-exporter = prev.callPackage ./pkgs/upc-qaire-exporter/default.nix { };
-    taopencl = callPackage ./pkgs/taopencl/default.nix { };
     wxparaver = callPackage ./pkgs/paraver/default.nix { };
-
-    _cuda = prev._cuda.extend (_: _prev: final.lib.recursiveUpdate _prev {
-      extensions = _prev.extensions ++ [(finalAttrs: _: {
-        tacuda = finalAttrs.callPackage ./pkgs/tacuda/default.nix { };
-      })];
-    });
   };
 
   tests = rec {
@@ -102,13 +66,6 @@ let
     #sigsegv = callPackage ./test/reproducers/sigsegv.nix { };
     hello-c = callPackage ./test/compilers/hello-c.nix { };
     hello-cpp = callPackage ./test/compilers/hello-cpp.nix { };
-    hello-sycl = callPackage ./test/compilers/hello-sycl.nix { };
-    hello-syclompss = callPackage ./test/compilers/icpx-ompss2.nix { };
-    hello-sycl-pocl = (callPackage ./test/compilers/hello-sycl.nix { }).withPocl;
-    hello-sycl-intel = (callPackage ./test/compilers/hello-sycl.nix { }).withIntel;
-    hello-syclompss-pocl = (callPackage ./test/compilers/icpx-ompss2.nix { }).withPocl;
-    hello-syclompss-intel = (callPackage ./test/compilers/icpx-ompss2.nix { }).withIntel;
-
     lto = callPackage ./test/compilers/lto.nix { };
     asan = callPackage ./test/compilers/asan.nix { };
     intel2023-icx-c   = hello-c.override   { stdenv = final.intelPackages_2023.stdenv; };
@@ -118,13 +75,6 @@ let
     intel2023-ifort   = callPackage ./test/compilers/hello-f.nix {
       stdenv = final.intelPackages_2023.stdenv-ifort;
     };
-    intel2024-icx-c   = hello-c.override   { stdenv = final.intelPackages_2024.stdenv; };
-    intel2025-icx-c   = hello-c.override   { stdenv = final.intelPackages_2025.stdenv; };
-    intel2024-icx-cpp = hello-cpp.override { stdenv = final.intelPackages_2024.stdenv; };
-    intel2025-icx-cpp = hello-cpp.override { stdenv = final.intelPackages_2025.stdenv; };
-    # intel2023-sycl    = hello-sycl.override { intelPackages = final.intelPackages_2023; }; # broken
-    intel2024-sycl    = hello-sycl.override { intelPackages = final.intelPackages_2024; };
-    intel2025-sycl    = hello-sycl.override { intelPackages = final.intelPackages_2025; };
     clangOmpss2-lto   = lto.override       { stdenv = final.stdenvClangOmpss2Nanos6; };
     clangOmpss2-asan  = asan.override      { stdenv = final.stdenvClangOmpss2Nanos6; };
     clangOmpss2-task  = callPackage ./test/compilers/ompss2.nix {
@@ -142,31 +92,20 @@ let
     clangNosvOmpv-ld = callPackage ./test/compilers/clang-openmp-ld.nix {
       stdenv = final.stdenvClangOmpss2NodesOmpv;
     };
-
-    ocl-build = callPackage ./test/compilers/opencl.nix { };
-    ocl-build-noicd = callPackage ./test/compilers/opencl.nix { ocl-icd = final.pocl-noicd; };
-
-    pocl = callPackage ./test/compilers/pocl.nix { };
-    ocl-run-pocl = ocl-build.test-icd;
-    ocl-run-pocl-noicd = ocl-build-noicd.test-noicd;
-
-    sycl-ls = callPackage ./test/compilers/sycl-ls.nix { };
   };
 
   # For now, only build toplevel packages in CI/Hydra
   pkgsTopLevel = filterAttrs (_: isDerivation) bscPkgs;
 
   # Native build in that platform doesn't imply cross build works
-  canCrossCompile = platform: default: pkg:
+  canCrossCompile = platform: pkg:
     (isDerivation pkg) &&
-    # If meta.cross is undefined, use default
+    # Must be defined explicitly
-    (pkg.meta.cross or default) &&
+    (pkg.meta.cross or false) &&
-    (meta.availableOn final.pkgsCross.${platform}.stdenv.hostPlatform pkg);
+    (meta.availableOn platform pkg);
 
   # For now only RISC-V
-  crossSet = genAttrs [ "riscv64" ] (platform:
+  crossSet = { riscv64 = final.pkgsCross.riscv64.bsc.pkgsTopLevel; };
-    filterAttrs (_: canCrossCompile platform true)
-      final.pkgsCross.${platform}.bsc.pkgsTopLevel);
 
   buildList = name: paths:
     final.runCommandLocal name { } ''
@@ -186,17 +125,10 @@ let
   # For now only RISC-V
   crossList = buildList "ci-cross"
     (filter
-      (canCrossCompile "riscv64" false) # opt-in (pkgs with: meta.cross = true)
+      (canCrossCompile final.pkgsCross.riscv64.stdenv.hostPlatform)
         (builtins.attrValues crossSet.riscv64));
 
 in bscPkgs // {
-
-  lib = prev.lib // {
-    maintainers = prev.lib.maintainers // {
-      bsc = import ./pkgs/maintainers.nix;
-    };
-  };
-
   # Prevent accidental usage of bsc-ci attribute
   bsc-ci = throw "the bsc-ci attribute is deprecated, use bsc.ci";
 

pkgs/agenix/agenix.sh

@@ -1,212 +0,0 @@
-#!/usr/bin/env bash
-set -Eeuo pipefail
-
-PACKAGE="agenix"
-
-function show_help () {
-  echo "$PACKAGE - edit and rekey age secret files"
-  echo " "
-  echo "$PACKAGE -e FILE [-i PRIVATE_KEY]"
-  echo "$PACKAGE -r [-i PRIVATE_KEY]"
-  echo ' '
-  echo 'options:'
-  echo '-h, --help                show help'
-  # shellcheck disable=SC2016
-  echo '-e, --edit FILE           edits FILE using $EDITOR'
-  echo '-r, --rekey               re-encrypts all secrets with specified recipients'
-  echo '-d, --decrypt FILE        decrypts FILE to STDOUT'
-  echo '-i, --identity            identity to use when decrypting'
-  echo '-v, --verbose             verbose output'
-  echo ' '
-  echo 'FILE an age-encrypted file'
-  echo ' '
-  echo 'PRIVATE_KEY a path to a private SSH key used to decrypt file'
-  echo ' '
-  echo 'EDITOR environment variable of editor to use when editing FILE'
-  echo ' '
-  echo 'If STDIN is not interactive, EDITOR will be set to "cp /dev/stdin"'
-  echo ' '
-  echo 'RULES environment variable with path to Nix file specifying recipient public keys.'
-  echo "Defaults to './secrets.nix'"
-  echo ' '
-  echo "agenix version: @version@"
-  echo "age binary path: @ageBin@"
-  echo "age version: $(@ageBin@ --version)"
-}
-
-function warn() {
-  printf '%s\n' "$*" >&2
-}
-
-function err() {
-  warn "$*"
-  exit 1
-}
-
-test $# -eq 0 && (show_help && exit 1)
-
-REKEY=0
-DECRYPT_ONLY=0
-DEFAULT_DECRYPT=(--decrypt)
-
-while test $# -gt 0; do
-  case "$1" in
-    -h|--help)
-      show_help
-      exit 0
-      ;;
-    -e|--edit)
-      shift
-      if test $# -gt 0; then
-        export FILE=$1
-      else
-        echo "no FILE specified"
-        exit 1
-      fi
-      shift
-      ;;
-    -i|--identity)
-      shift
-      if test $# -gt 0; then
-        DEFAULT_DECRYPT+=(--identity "$1")
-      else
-        echo "no PRIVATE_KEY specified"
-        exit 1
-      fi
-      shift
-      ;;
-    -r|--rekey)
-      shift
-      REKEY=1
-      ;;
-    -d|--decrypt)
-      shift
-      DECRYPT_ONLY=1
-      if test $# -gt 0; then
-        export FILE=$1
-      else
-        echo "no FILE specified"
-        exit 1
-      fi
-      shift
-      ;;
-    -v|--verbose)
-      shift
-      set -x
-      ;;
-    *)
-      show_help
-      exit 1
-      ;;
-  esac
-done
-
-RULES=${RULES:-./secrets.nix}
-function cleanup {
-    if [ -n "${CLEARTEXT_DIR+x}" ]
-    then
-        rm -rf -- "$CLEARTEXT_DIR"
-    fi
-    if [ -n "${REENCRYPTED_DIR+x}" ]
-    then
-        rm -rf -- "$REENCRYPTED_DIR"
-    fi
-}
-trap "cleanup" 0 2 3 15
-
-function keys {
-    (@nixInstantiate@ --json --eval --strict -E "(let rules = import $RULES; in rules.\"$1\".publicKeys)" | @jqBin@ -r .[]) || exit 1
-}
-
-function armor {
-    (@nixInstantiate@ --json --eval --strict -E "(let rules = import $RULES; in (builtins.hasAttr \"armor\" rules.\"$1\" && rules.\"$1\".armor))") || exit 1
-}
-
-function decrypt {
-    FILE=$1
-    KEYS=$2
-    if [ -z "$KEYS" ]
-    then
-        err "There is no rule for $FILE in $RULES."
-    fi
-
-    if [ -f "$FILE" ]
-    then
-        DECRYPT=("${DEFAULT_DECRYPT[@]}")
-        if [[ "${DECRYPT[*]}" != *"--identity"* ]]; then
-            if [ -f "$HOME/.ssh/id_rsa" ]; then
-                DECRYPT+=(--identity "$HOME/.ssh/id_rsa")
-            fi
-            if [ -f "$HOME/.ssh/id_ed25519" ]; then
-                DECRYPT+=(--identity "$HOME/.ssh/id_ed25519")
-            fi
-        fi
-        if [[ "${DECRYPT[*]}" != *"--identity"* ]]; then
-          err "No identity found to decrypt $FILE. Try adding an SSH key at $HOME/.ssh/id_rsa or $HOME/.ssh/id_ed25519 or using the --identity flag to specify a file."
-        fi
-
-        @ageBin@ "${DECRYPT[@]}" -- "$FILE" || exit 1
-    fi
-}
-
-function edit {
-    FILE=$1
-    KEYS=$(keys "$FILE") || exit 1
-    ARMOR=$(armor "$FILE") || exit 1
-
-    CLEARTEXT_DIR=$(@mktempBin@ -d)
-    CLEARTEXT_FILE="$CLEARTEXT_DIR/$(basename -- "$FILE")"
-    DEFAULT_DECRYPT+=(-o "$CLEARTEXT_FILE")
-
-    decrypt "$FILE" "$KEYS" || exit 1
-
-    [ ! -f "$CLEARTEXT_FILE" ] || cp -- "$CLEARTEXT_FILE" "$CLEARTEXT_FILE.before"
-
-    [ -t 0 ] || EDITOR='cp -- /dev/stdin'
-
-    $EDITOR "$CLEARTEXT_FILE"
-
-    if [ ! -f "$CLEARTEXT_FILE" ]
-    then
-      warn "$FILE wasn't created."
-      return
-    fi
-    [ -f "$FILE" ] && [ "$EDITOR" != ":" ] && @diffBin@ -q -- "$CLEARTEXT_FILE.before" "$CLEARTEXT_FILE" && warn "$FILE wasn't changed, skipping re-encryption." && return
-
-    ENCRYPT=()
-    if [[ "$ARMOR" == "true" ]]; then
-        ENCRYPT+=(--armor)
-    fi
-    while IFS= read -r key
-    do
-        if [ -n "$key" ]; then
-            ENCRYPT+=(--recipient "$key")
-        fi
-    done <<< "$KEYS"
-
-    REENCRYPTED_DIR=$(@mktempBin@ -d)
-    REENCRYPTED_FILE="$REENCRYPTED_DIR/$(basename -- "$FILE")"
-
-    ENCRYPT+=(-o "$REENCRYPTED_FILE")
-
-    @ageBin@ "${ENCRYPT[@]}" <"$CLEARTEXT_FILE" || exit 1
-
-    mkdir -p -- "$(dirname -- "$FILE")"
-
-    mv -f -- "$REENCRYPTED_FILE" "$FILE"
-}
-
-function rekey {
-    FILES=$( (@nixInstantiate@ --json --eval -E "(let rules = import $RULES; in builtins.attrNames rules)"  | @jqBin@ -r .[]) || exit 1)
-
-    for FILE in $FILES
-    do
-        warn "rekeying $FILE..."
-        EDITOR=: edit "$FILE"
-        cleanup
-    done
-}
-
-[ $REKEY -eq 1 ] && rekey && exit 0
-[ $DECRYPT_ONLY -eq 1 ] && DEFAULT_DECRYPT+=("-o" "-") && decrypt "${FILE}" "$(keys "$FILE")" && exit 0
-edit "$FILE" && cleanup && exit 0

pkgs/agenix/default.nix

@@ -1,66 +0,0 @@
-{
-  lib,
-  stdenv,
-  age,
-  jq,
-  nix,
-  mktemp,
-  diffutils,
-  replaceVars,
-  ageBin ? "${age}/bin/age",
-  shellcheck,
-}:
-let
-  bin = "${placeholder "out"}/bin/agenix";
-in
-stdenv.mkDerivation rec {
-  pname = "agenix";
-  version = "0.15.0";
-  src = replaceVars ./agenix.sh {
-    inherit ageBin version;
-    jqBin = "${jq}/bin/jq";
-    nixInstantiate = "${nix}/bin/nix-instantiate";
-    mktempBin = "${mktemp}/bin/mktemp";
-    diffBin = "${diffutils}/bin/diff";
-  };
-  dontUnpack = true;
-  doInstallCheck = true;
-  installCheckInputs = [ shellcheck ];
-  postInstallCheck = ''
-    shellcheck ${bin}
-    ${bin} -h | grep ${version}
-
-    test_tmp=$(mktemp -d 2>/dev/null || mktemp -d -t 'mytmpdir')
-    export HOME="$test_tmp/home"
-    export NIX_STORE_DIR="$test_tmp/nix/store"
-    export NIX_STATE_DIR="$test_tmp/nix/var"
-    mkdir -p "$HOME" "$NIX_STORE_DIR" "$NIX_STATE_DIR"
-    function cleanup {
-      rm -rf "$test_tmp"
-    }
-    trap "cleanup" 0 2 3 15
-
-    mkdir -p $HOME/.ssh
-    cp -r "${./example}" $HOME/secrets
-    chmod -R u+rw $HOME/secrets
-    (
-    umask u=rw,g=r,o=r
-    cp ${./example_keys/user1.pub} $HOME/.ssh/id_ed25519.pub
-    chown $UID $HOME/.ssh/id_ed25519.pub
-    )
-    (
-    umask u=rw,g=,o=
-    cp ${./example_keys/user1} $HOME/.ssh/id_ed25519
-    chown $UID $HOME/.ssh/id_ed25519
-    )
-
-    cd $HOME/secrets
-    test $(${bin} -d secret1.age) = "hello"
-  '';
-
-  installPhase = ''
-    install -D $src ${bin}
-  '';
-
-  meta.description = "age-encrypted secrets for NixOS";
-}

pkgs/agenix/example/-leading-hyphen-filename.age

@@ -1,7 +0,0 @@
-age-encryption.org/v1
--> ssh-ed25519 V3XmEA zirqdzZZ1E+sedBn7fbEHq4ntLEkokZ4GctarBBOHXY
-Rvs5YHaAUeCZyNwPedubPcHClWYIuXXWA5zadXPWY6w
--> ssh-ed25519 KLPP8w BVp4rDkOYSQyn8oVeHFeinSqW+pdVtxBF9+5VM1yORY
-bMwppAi8Nhz0328taU4AzUkTVyWtSLvFZG6c5W/Fs78
---- xCbqLhXAcOziO2wmbjTiSQfZvt5Rlsc4SCvF+iEzpQA
-<EFBFBD>KB<EFBFBD><EFBFBD>/<2F>Z<><5A>r<EFBFBD>%
<01><>4<EFBFBD><34><EFBFBD>Mq5<71><35>_<EFBFBD><5F>ݒ<><DD92><EFBFBD><EFBFBD><EFBFBD>11ܨqM;& <20><>Lr<4C><72><EFBFBD>f<EFBFBD><66><EFBFBD>]>N

pkgs/agenix/example/armored-secret.age

@@ -1,7 +0,0 @@
------BEGIN AGE ENCRYPTED FILE-----
-YWdlLWVuY3J5cHRpb24ub3JnL3YxCi0+IHNzaC1lZDI1NTE5IFYzWG1FQSBpZkZW
-aFpLNnJxc0VUMHRmZ2dZS0pjMGVENnR3OHd5K0RiT1RjRUhibFZBCnN5UG5vUjA3
-SXpsNGtiVUw4T0tIVFo5Wkk5QS9NQlBndzVvektiQ0ozc0kKLS0tIGxyY1Q4dEZ1
-VGZEanJyTFNta2JNRmpZb2FnK2JyS1hSVml1UGdMNWZKQXMKYla+wTXcRedyZoEb
-LVWaSx49WoUTU0KBPJg9RArxaeC23GoCDzR/aM/1DvYU
------END AGE ENCRYPTED FILE-----

pkgs/agenix/example/passwordfile-user1.age

@@ -1,9 +0,0 @@
-age-encryption.org/v1
--> ssh-ed25519 KLPP8w s1DYZRlZuSsyhmZCF1lFB+E9vB8bZ/+ZhBRlx8nprwE
-nmYVCsVBrX2CFXXPU+D+bbkkIe/foofp+xoUrg9DHZw
--> ssh-ed25519 V3XmEA Pwv3oCwcY0DX8rY48UNfsj9RumWsn4dbgorYHCwObgI
-FKxRYkL3JHtJxUwymWDF0rAtJ33BivDI6IfPsfumM90
--> V'v(/u$-grease em/Vgf 2qDuk
-7I3iiQLPGi1COML9u/JeYkr7EqbSLoU
---- 57WJRigUGtmcObrssS3s4PvmR8wgh1AOC/ijJn1s3xI
-<EFBFBD>'K<>ƷY&<26>7G<37>O<EFBFBD><4F>Fj
<13>k<EFBFBD>X<EFBFBD><58>BnuJ<75><4A>:9<>(<><7F><EFBFBD>X<EFBFBD>#<23>A<EFBFBD><41><EFBFBD><EFBFBD>ڧj<DAA7>,<02>_<17><><EFBFBD>?<3F>Z<EFBFBD><17>v<EFBFBD><76>V<EFBFBD>96]oks~%<25>c	<04>e^C<>%JQ5<51><H<>z}<7D>C<EFBFBD>,<2C>p<EFBFBD><70>*!W<><57><EFBFBD>A<EFBFBD><41><EFBFBD>҅dC<15>K)<10><>-<2D>y

pkgs/agenix/example/secret2.age

@@ -1,5 +0,0 @@
-age-encryption.org/v1
--> ssh-ed25519 V3XmEA OB4+1FbPhQ3r6iGksM7peWX5it8NClpXIq/o5nnP7GA
-FmHVUj+A5i5+bDFgySQskmlvynnosJiWUTJmBRiNA9I
---- tP+3mFVtd7ogVu1Lkboh55zoi5a77Ht08Uc/QuIviv4
-<EFBFBD><EFBFBD>X<EFBFBD>{<7B><>O<EFBFBD><4F><1F><04>tMXx<58>vӪ(<28>I<EFBFBD>myP<79><50><EFBFBD><EFBFBD>+3<>S3i

pkgs/agenix/example/secrets.nix

@@ -1,23 +0,0 @@
-let
-  user1 = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIL0idNvgGiucWgup/mP78zyC23uFjYq0evcWdjGQUaBH";
-  system1 = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIPJDyIr/FSz1cJdcoW69R+NrWzwGK/+3gJpqD1t8L2zE";
-in
-{
-  "secret1.age".publicKeys = [
-    user1
-    system1
-  ];
-  "secret2.age".publicKeys = [ user1 ];
-  "passwordfile-user1.age".publicKeys = [
-    user1
-    system1
-  ];
-  "-leading-hyphen-filename.age".publicKeys = [
-    user1
-    system1
-  ];
-  "armored-secret.age" = {
-    publicKeys = [ user1 ];
-    armor = true;
-  };
-}

pkgs/agenix/example_keys/system1

@@ -1,7 +0,0 @@
------BEGIN OPENSSH PRIVATE KEY-----
-b3BlbnNzaC1rZXktdjEAAAAABG5vbmUAAAAEbm9uZQAAAAAAAAABAAAAMwAAAAtzc2gtZW
-QyNTUxOQAAACDyQ8iK/xUs9XCXXKFuvUfja1s8Biv/t4Caag9bfC9sxAAAAJA3yvCWN8rw
-lgAAAAtzc2gtZWQyNTUxOQAAACDyQ8iK/xUs9XCXXKFuvUfja1s8Biv/t4Caag9bfC9sxA
-AAAEA+J2V6AG1NriAIvnNKRauIEh1JE9HSdhvKJ68a5Fm0w/JDyIr/FSz1cJdcoW69R+Nr
-WzwGK/+3gJpqD1t8L2zEAAAADHJ5YW50bUBob21lMQE=
------END OPENSSH PRIVATE KEY-----

pkgs/agenix/example_keys/system1.pub

@@ -1 +0,0 @@
-ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIPJDyIr/FSz1cJdcoW69R+NrWzwGK/+3gJpqD1t8L2zE

pkgs/agenix/example_keys/user1

@@ -1,7 +0,0 @@
------BEGIN OPENSSH PRIVATE KEY-----
-b3BlbnNzaC1rZXktdjEAAAAABG5vbmUAAAAEbm9uZQAAAAAAAAABAAAAMwAAAAtzc2gtZW
-QyNTUxOQAAACC9InTb4BornFoLqf5j+/M8gtt7hY2KtHr3FnYxkFGgRwAAAJC2JJ8htiSf
-IQAAAAtzc2gtZWQyNTUxOQAAACC9InTb4BornFoLqf5j+/M8gtt7hY2KtHr3FnYxkFGgRw
-AAAEDxt5gC/s53IxiKAjfZJVCCcFIsdeERdIgbYhLO719+Kb0idNvgGiucWgup/mP78zyC
-23uFjYq0evcWdjGQUaBHAAAADHJ5YW50bUBob21lMQE=
------END OPENSSH PRIVATE KEY-----

pkgs/agenix/example_keys/user1.pub

@@ -1 +0,0 @@
-ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIL0idNvgGiucWgup/mP78zyC23uFjYq0evcWdjGQUaBH

pkgs/agenix/update.sh

@@ -1,23 +0,0 @@
-#!/bin/sh
-
-set -e
-
-# All operations are done relative to root
-GITROOT=$(git rev-parse --show-toplevel)
-cd "$GITROOT"
-
-REVISION=${1:-main}
-
-TMPCLONE=$(mktemp -d)
-trap "rm -rf ${TMPCLONE}" EXIT
-
-git clone https://github.com/ryantm/agenix.git --revision="$REVISION" "$TMPCLONE" --depth=1
-
-cp "${TMPCLONE}/pkgs/agenix.sh" pkgs/agenix/agenix.sh
-cp "${TMPCLONE}/pkgs/agenix.nix" pkgs/agenix/default.nix
-sed -i 's#../example#./example#' pkgs/agenix/default.nix
-
-cp "${TMPCLONE}/example/"* pkgs/agenix/example/
-cp "${TMPCLONE}/example_keys/"* pkgs/agenix/example_keys/
-
-cp "${TMPCLONE}/modules/age.nix" m/module/agenix.nix

pkgs/amd-uprof/default.nix

@@ -47,7 +47,6 @@ in
     inherit version;
     src = uprofSrc;
     dontStrip = true;
-    strictDeps = true;
     phases = [ "installPhase" "fixupPhase" ];
     nativeBuildInputs = [ autoPatchelfHook radare2 ];
     buildInputs = [
@@ -87,13 +86,4 @@ in
       patchelf --add-needed libnuma.so $out/bin/AMDuProfPcm
       set +x
     '';
-
-    meta = {
-      description = "Performance analysis tool-suite for x86 based applications";
-      homepage = "https://www.amd.com/es/developer/uprof.html";
-      platforms = [ "x86_64-linux" ];
-      license = lib.licenses.unfree;
-      maintainers = with lib.maintainers.bsc; [ rarias varcila ];
-    };
-
   }

pkgs/amd-uprof/driver.nix

@@ -18,9 +18,8 @@ in stdenv.mkDerivation {
     set +x
   '';
   hardeningDisable = [ "pic" "format" ];
-  strictDeps = true;
   nativeBuildInputs = kernel.moduleBuildDependencies;
-  patches = [ ./makefile.patch ./hrtimer.patch ./remove-wr-rdmsrq.patch ];
+  patches = [ ./makefile.patch ./hrtimer.patch ];
   makeFlags = [
     "KERNEL_VERSION=${kernel.modDirVersion}"
     "KERNEL_DIR=${kernel.dev}/lib/modules/${kernel.modDirVersion}/build"
@@ -30,7 +29,5 @@ in stdenv.mkDerivation {
     description = "AMD Power Profiler Driver";
     homepage = "https://www.amd.com/es/developer/uprof.html";
     platforms = lib.platforms.linux;
-    license = lib.licenses.unfree;
-    maintainers = with lib.maintainers.bsc; [ rarias varcila ];
   };
 }

pkgs/amd-uprof/remove-wr-rdmsrq.patch

@@ -1,20 +0,0 @@
-diff --git a/inc/PwrProfAsm.h b/inc/PwrProfAsm.h
-index d77770a..c93a0e9 100644
---- a/inc/PwrProfAsm.h
-+++ b/inc/PwrProfAsm.h
-@@ -347,6 +347,7 @@
- 
- #endif
- 
-+/*
- #define rdmsrq(msr,val1,val2,val3,val4) ({ \
-         __asm__ __volatile__( \
-                               "rdmsr\n" \
-@@ -362,6 +363,7 @@
-                               :"c"(msr), "a"(val1), "d"(val2), "S"(val3), "D"(val4) \
-                             ); \
-     })
-+*/
- 
- #define rdmsrpw(msr,val1,val2,val3,val4) ({ \
-         __asm__ __volatile__( \

pkgs/aocc/default.nix

@@ -1,17 +0,0 @@
-{
-  wrapCCWith,
-  aoccUnwrapped,
-}:
-
-let
-  cc = aoccUnwrapped;
-in
-wrapCCWith {
-  inherit cc;
-  nixSupport.cc-cflags = [ "-isystem ${cc}/include" ];
-
-  extraBuildCommands = ''
-    wrap aocc   $wrapper $ccPath/clang
-    wrap aocc++ $wrapper $ccPath/clang++
-  '';
-}

pkgs/aocc/unwrapped.nix

@@ -1,52 +0,0 @@
-{
-  lib,
-  fetchurl,
-  stdenv,
-  autoPatchelfHook,
-  rocmPackages,
-  zlib,
-  libffi,
-  elfutils,
-}:
-
-let
-  # in newer nixpkgs the runtime is hsakmt
-  rocmRuntime = if rocmPackages ? hsakmt then rocmPackages.hsakmt else rocmPackages.rocm-runtime;
-in
-stdenv.mkDerivation {
-  pname = "aocc-compiler";
-  version = "5.0.0";
-
-  src = fetchurl {
-    url = "https://download.amd.com/developer/eula/aocc/aocc-5-0/aocc-compiler-5.0.0.tar";
-    sha256 = "sha256-lm+sLSx1np3m6WnBCtp6ezBsET9/HgfqN2gp7IY4Dao=";
-  };
-
-  nativeBuildInputs = [ autoPatchelfHook ];
-  buildInputs = [
-    elfutils
-    zlib
-    rocmRuntime
-    stdenv.cc.cc.lib
-  ];
-  phases = [
-    "unpackPhase"
-    "installPhase"
-    "fixupPhase"
-  ];
-  dontStrip = true;
-
-  installPhase = ''
-    mkdir -p $out
-    cp -a . $out/
-
-    ln -s ${lib.getLib libffi}/lib/libffi.so $out/lib/libffi.so.6
-  '';
-
-  passthru = {
-    inherit rocmRuntime;
-    isClang = true; # Needed for wrapCCWith
-  };
-
-  meta.mainProgram = "clang";
-}

pkgs/bench6/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , bigotes
 , cmake
 , clangOmpss2
@@ -59,13 +58,4 @@ stdenv.mkDerivation rec {
   ];
   hardeningDisable = [ "all" ];
   dontStrip = true;
-  strictDeps = true;
-
-  meta = {
-    homepage = "https://gitlab.pm.bsc.es/rarias/bench6";
-    description = "Set of micro-benchmarks for OmpSs-2 and several mini-apps";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.gpl3Plus;
-  };
 }

pkgs/bigotes/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , fetchFromGitHub
 , cmake
 }:
@@ -15,14 +14,4 @@ stdenv.mkDerivation {
     sha256 = "sha256-ktxM3pXiL8YXSK+/IKWYadijhYXqGoLY6adLk36iigE=";
   };
   nativeBuildInputs = [ cmake ];
-
-  strictDeps = true;
-
-  meta = {
-    homepage = "https://github.com/rodarima/bigotes";
-    description = "Versatile benchmark tool";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.gpl3Plus;
-  };
 }

pkgs/cudainfo/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , cudatoolkit
 , cudaPackages
 , autoAddDriverRunpath
@@ -10,13 +9,10 @@
 stdenv.mkDerivation (finalAttrs: {
   name = "cudainfo";
   src = ./.;
-  strictDeps = true;
-  nativeBuildInputs = [
-    cudatoolkit # Required for nvcc
-    autoAddDriverRunpath
-  ];
   buildInputs = [
-    (lib.getOutput "static" cudaPackages.cuda_cudart) # Required for -lcudart_static
+    cudatoolkit # Required for nvcc
+    cudaPackages.cuda_cudart.static # Required for -lcudart_static
+    autoAddDriverRunpath
   ];
   installPhase = ''
     mkdir -p $out/bin
@@ -26,7 +22,6 @@ stdenv.mkDerivation (finalAttrs: {
     name = "cudainfo-test";
     requiredSystemFeatures = [ "cuda" ];
     dontBuild = true;
-    strictDeps = true;
     nativeCheckInputs = [
       finalAttrs.finalPackage # The cudainfo package from above
       strace # When it fails, it will show the trace
@@ -45,9 +40,4 @@ stdenv.mkDerivation (finalAttrs: {
     '';
     installPhase = "touch $out";
   };
-
-  meta = {
-    platforms = [ "x86_64-linux" ];
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-  };
 })

pkgs/extrae/default.nix

@@ -20,7 +20,7 @@
 #, python3Packages
 , installShellFiles
 , symlinkJoin
-, enablePapi ? true
+, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
 }:
 
 let
@@ -111,13 +111,4 @@ stdenv.mkDerivation rec {
 #    then [ "--enable-openmp" ]
 #    else []
 #  );
-
-  meta = {
-    homepage = "https://github.com/bsc-performance-tools/extrae";
-    description = "Instrumentation framework to generate execution traces of the most used parallel runtimes";
-    maintainers = [ ];
-    broken = true;
-    platforms = lib.platforms.linux;
-    license = lib.licenses.lgpl21Plus;
-  };
 }

pkgs/gpi-2/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , fetchurl
 , symlinkJoin
 , slurm
@@ -9,6 +8,7 @@
 , automake
 , libtool
 , mpi
+, rsync
 , gfortran
 }:
 
@@ -33,7 +33,6 @@ stdenv.mkDerivation rec {
   };
 
   enableParallelBuilding = true;
-  strictDeps = true;
 
   patches = [ ./rdma-core.patch ./max-mem.patch ];
 
@@ -44,33 +43,13 @@ stdenv.mkDerivation rec {
 
   configureFlags = [
     "--with-infiniband=${rdma-core-all}"
-    "--with-mpi=yes" # fixes mpi detection when cross-compiling
+    "--with-mpi=${mpiAll}"
     "--with-slurm"
     "CFLAGS=-fPIC"
     "CXXFLAGS=-fPIC"
   ];
 
-  nativeBuildInputs = [
+  buildInputs = [ slurm mpiAll rdma-core-all autoconf automake libtool rsync gfortran ];
-    autoconf
-    automake
-    gfortran
-    libtool
-  ];
-
-  buildInputs = [
-    slurm
-    mpiAll
-    rdma-core-all
-  ];
 
   hardeningDisable = [ "all" ];
-
-  meta = {
-    homepage = "https://pm.bsc.es/gitlab/interoperability/extern/GPI-2";
-    description = "GPI-2 extended for supporting Task-Aware GASPI (TAGASPI) library";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.gpl3Plus;
-    cross = false; # infiniband detection does not work
-  };
 }

pkgs/gromacs/default.nix

@@ -1,190 +0,0 @@
-{
-  lib,
-  stdenv,
-  fetchurl,
-  cmake,
-  hwloc,
-  fftw,
-  perl,
-  blas,
-  lapack,
-  llvmPackages,
-  intelPackages ? null,
-  mpi,
-  cudaPackages,
-  plumed,
-  singlePrec ? true,
-  config,
-  enableSYCL ? false,
-  enableCuda ? config.cudaSupport,
-  enableMpi ? false,
-  enablePlumed ? false,
-  cpuAcceleration ? null,
-}:
-
-# CUDA is only implemented for single precission
-assert enableCuda -> singlePrec;
-
-assert !(enableSYCL && enableCuda);
-
-assert enableSYCL -> intelPackages != null;
-
-let
-  inherit (cudaPackages.flags) cmakeCudaArchitecturesString;
-
-  # Select reasonable defaults for all major platforms
-  # The possible values are defined in CMakeLists.txt:
-  # AUTO None SSE2 SSE4.1 AVX_128_FMA AVX_256 AVX2_256
-  # AVX2_128 AVX_512 AVX_512_KNL MIC ARM_NEON ARM_NEON_ASIMD
-  SIMD =
-    x:
-    if (cpuAcceleration != null) then
-      x
-    else if stdenv.hostPlatform.system == "i686-linux" then
-      "SSE2"
-    else if stdenv.hostPlatform.system == "x86_64-linux" then
-      "SSE4.1"
-    else if stdenv.hostPlatform.system == "x86_64-darwin" then
-      "SSE4.1"
-    else if stdenv.hostPlatform.system == "aarch64-linux" then
-      "ARM_NEON_ASIMD"
-    else
-      "None";
-
-  source =
-    if enablePlumed then
-      {
-        version = "2024.2";
-        hash = "sha256-gCp+M18uiVdw9XsVnk7DaOuw/yzm2sz3BsboAlw2hSs=";
-      }
-    else
-      {
-        version = "2025.3";
-        hash = "sha256-i9/KAmjz8Qp8o8BuWbYvc+oCQgxnIRwP85EvMteDPGU=";
-      };
-
-  stdenv' = if enableSYCL then intelPackages.stdenv else stdenv;
-
-in
-stdenv'.mkDerivation rec {
-  pname = "gromacs";
-  version = source.version;
-
-  src = fetchurl {
-    url = "ftp://ftp.gromacs.org/pub/gromacs/gromacs-${version}.tar.gz";
-    inherit (source) hash;
-  };
-
-  patches = [ (if enablePlumed then ./pkgconfig-2024.patch else ./pkgconfig-2025.patch) ];
-
-  postPatch = lib.optionalString enablePlumed ''
-    plumed patch -p -e gromacs-${source.version}
-  '';
-
-  outputs = [
-    "out"
-    "dev"
-    "man"
-  ];
-
-  nativeBuildInputs = [
-    cmake
-  ]
-  ++ lib.optional enablePlumed plumed
-  ++ lib.optionals enableCuda [ cudaPackages.cuda_nvcc ];
-
-  env.MKLROOT = intelPackages.mkl;
-
-  buildInputs = [
-    fftw
-    perl
-    hwloc
-    blas
-    lapack
-  ]
-  ++ lib.optional enableMpi mpi
-  ++ lib.optionals enableCuda [
-    cudaPackages.cuda_cccl
-    cudaPackages.cuda_cudart
-    cudaPackages.libcufft
-    cudaPackages.cuda_profiler_api
-  ]
-  ++ lib.optional stdenv.hostPlatform.isDarwin llvmPackages.openmp;
-
-  propagatedBuildInputs = lib.optional enableMpi mpi;
-  propagatedUserEnvPkgs = lib.optional enableMpi mpi;
-
-  cmakeFlags = [
-    (lib.cmakeBool "GMX_HWLOC" true)
-    "-DGMX_SIMD:STRING=${SIMD cpuAcceleration}"
-    "-DGMX_OPENMP:BOOL=TRUE"
-    "-DBUILD_SHARED_LIBS=ON"
-  ]
-  ++ (
-    if singlePrec then
-      [
-        "-DGMX_DOUBLE=OFF"
-      ]
-    else
-      [
-        "-DGMX_DOUBLE=ON"
-        "-DGMX_DEFAULT_SUFFIX=OFF"
-      ]
-  )
-  ++ (
-    if enableMpi then
-      [
-        "-DGMX_MPI:BOOL=TRUE"
-        "-DGMX_THREAD_MPI:BOOL=FALSE"
-      ]
-    else
-      [
-        "-DGMX_MPI:BOOL=FALSE"
-      ]
-  )
-  ++ (lib.optionals enableSYCL [
-    "-DGMX_GPU=SYCL"
-    "-DGMX_OPENMP=OFF" # TODO: enable OpenMP with SYCL?
-  ])
-  ++ lib.optionals enableCuda [
-    "-DGMX_GPU=CUDA"
-    (lib.cmakeFeature "CMAKE_CUDA_ARCHITECTURES" cmakeCudaArchitecturesString)
-
-    # Gromacs seems to ignore and override the normal variables, so we add this ad hoc:
-    (lib.cmakeFeature "GMX_CUDA_TARGET_COMPUTE" cmakeCudaArchitecturesString)
-  ];
-
-  postInstall = ''
-    moveToOutput share/cmake $dev
-  '';
-
-  meta = with lib; {
-    homepage = "https://www.gromacs.org";
-    license = licenses.lgpl21Plus;
-    description = "Molecular dynamics software package";
-    longDescription = ''
-      GROMACS is a versatile package to perform molecular dynamics,
-      i.e. simulate the Newtonian equations of motion for systems
-      with hundreds to millions of particles.
-
-      It is primarily designed for biochemical molecules like
-      proteins, lipids and nucleic acids that have a lot of
-      complicated bonded interactions, but since GROMACS is
-      extremely fast at calculating the nonbonded interactions (that
-      usually dominate simulations) many groups are also using it
-      for research on non-biological systems, e.g. polymers.
-
-      GROMACS supports all the usual algorithms you expect from a
-      modern molecular dynamics implementation, (check the online
-      reference or manual for details), but there are also quite a
-      few features that make it stand out from the competition.
-
-      See: https://www.gromacs.org/about.html for details.
-    '';
-    platforms = platforms.unix;
-    maintainers = with maintainers; [
-      sheepforce
-      markuskowa
-    ];
-  };
-}

pkgs/gromacs/pkgconfig-2024.patch

@@ -1,24 +0,0 @@
-diff --git a/src/external/muparser/muparser.pc.in b/src/external/muparser/muparser.pc.in
-index 646787cb53..9b97ad57f7 100644
---- a/src/external/muparser/muparser.pc.in
-+++ b/src/external/muparser/muparser.pc.in
-@@ -1,7 +1,5 @@
--prefix=@CMAKE_INSTALL_PREFIX@
--exec_prefix=${prefix}
--libdir=${prefix}/@CMAKE_INSTALL_LIBDIR@
--includedir=${prefix}/@CMAKE_INSTALL_INCLUDEDIR@
-+libdir=@CMAKE_INSTALL_FULL_LIBDIR@
-+includedir=@CMAKE_INSTALL_FULL_INCLUDEDIR@
- 
- Name: @PACKAGE_NAME@
- Description: Mathematical expressions parser library
-diff --git a/src/gromacs/libgromacs.pc.cmakein b/src/gromacs/libgromacs.pc.cmakein
-index ec1ed6684e..ca1105474a 100644
---- a/src/gromacs/libgromacs.pc.cmakein
-+++ b/src/gromacs/libgromacs.pc.cmakein
-@@ -1,4 +1,4 @@
--libdir=@CMAKE_INSTALL_PREFIX@/@CMAKE_INSTALL_LIBDIR@
-+libdir=@CMAKE_INSTALL_FULL_LIBDIR@
- 
- Name: libgromacs@GMX_LIBS_SUFFIX@
- Description: Gromacs library

pkgs/gromacs/pkgconfig-2025.patch

@@ -1,36 +0,0 @@
-diff --git a/src/external/muparser/muparser.pc.in b/src/external/muparser/muparser.pc.in
-index 646787cb53..d26e84de8f 100644
---- a/src/external/muparser/muparser.pc.in
-+++ b/src/external/muparser/muparser.pc.in
-@@ -1,11 +1,9 @@
--prefix=@CMAKE_INSTALL_PREFIX@
--exec_prefix=${prefix}
--libdir=${prefix}/@CMAKE_INSTALL_LIBDIR@
--includedir=${prefix}/@CMAKE_INSTALL_INCLUDEDIR@
--
--Name: @PACKAGE_NAME@
--Description: Mathematical expressions parser library
--Version: @MUPARSER_VERSION@
--Requires:
--Libs: -L${libdir} -lmuparser
--Cflags: -I${includedir} @PKG_CONFIG_FLAGS@
-+libdir=@CMAKE_INSTALL_FULL_LIBDIR@
-+includedir=@CMAKE_INSTALL_FULL_INCLUDEDIR@
-+
-+Name: @PACKAGE_NAME@
-+Description: Mathematical expressions parser library
-+Version: @MUPARSER_VERSION@
-+Requires:
-+Libs: -L${libdir} -lmuparser
-+Cflags: -I${includedir} @PKG_CONFIG_FLAGS@
-diff --git a/src/gromacs/libgromacs.pc.cmakein b/src/gromacs/libgromacs.pc.cmakein
-index af9b5a6dc0..5f58d549bf 100644
---- a/src/gromacs/libgromacs.pc.cmakein
-+++ b/src/gromacs/libgromacs.pc.cmakein
-@@ -1,5 +1,4 @@
--prefix=@CMAKE_INSTALL_PREFIX@
--libdir=${prefix}/@CMAKE_INSTALL_LIBDIR@
-+libdir=@CMAKE_INSTALL_FULL_LIBDIR@
-
- Name: libgromacs@GMX_LIBS_SUFFIX@
- Description: Gromacs library

pkgs/intel-compiler/icc2020.nix

@@ -1,5 +1,4 @@
 { stdenv
-, lib
 , fetchurl
 , rpmextract
 , autoPatchelfHook
@@ -60,12 +59,4 @@ stdenv.mkDerivation rec {
       rm $out/lib/*.dbg
     popd
   '';
-
-  meta = {
-    homepage = "https://www.intel.com/content/www/us/en/developer/tools/overview.html";
-    description = "Intel compiler";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.unfree;
-  };
 }

pkgs/intel-compiler/icc2021.nix

@@ -145,12 +145,4 @@ in
       popd
     '';
 
-    meta = {
-      homepage = "https://www.intel.com/content/www/us/en/developer/tools/overview.html";
-      description = "Intel compiler";
-      maintainers = with lib.maintainers.bsc; [ rarias ];
-      platforms = lib.platforms.linux;
-      license = lib.licenses.unfree;
-    };
-
   }

pkgs/intel-mpi/default.nix

@@ -1,5 +1,4 @@
 { stdenv
-, lib
 , rpmextract
 , gcc
 , zlib
@@ -102,12 +101,4 @@ stdenv.mkDerivation rec {
     patchelf --set-rpath "$out/lib:${rdma-core}/lib:${libpsm2}/lib" $out/lib/libfabric.so
     echo "Patched RPATH in libfabric.so to: $(patchelf --print-rpath $out/lib/libfabric.so)"
   '';
-
-  meta = {
-    homepage = "https://www.intel.com/content/www/us/en/developer/tools/overview.html";
-    description = "Intel MPI";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.unfree;
-  };
 }

pkgs/intel-oneapi/2023.nix

@@ -10,7 +10,7 @@
 , zlib
 , autoPatchelfHook
 , libfabric
-, gcc
+, gcc13
 , wrapCCWith
 }:
 
@@ -26,12 +26,7 @@
 
 let
 
-  meta = {
+  gcc = gcc13;
-    description = "Intel oneapi hpckit package component";
-    homepage = "https://www.intel.com/content/www/us/en/developer/tools/oneapi/hpc-toolkit-download.html";
-    license = lib.licenses.unfree;
-    maintainers = with lib.maintainers.bsc; [ abonerib ];
-  };
 
   v = {
     hpckit   = "2023.1.0";
@@ -40,19 +35,45 @@ let
     mpi      = "2021.9.0";
   };
 
-  findMatch = name:
+  aptPackageIndex = stdenv.mkDerivation {
-  let
+    name = "intel-oneapi-packages";
-    aptPackages = builtins.fromJSON (builtins.readFile ./packages.json);
+    srcs = [
-    matches = lib.filter (x: name == x.pname) aptPackages;
+      # Run update.sh to update the package lists
-    n = lib.length matches;
+      ./amd64-packages ./all-packages
-    match = builtins.traceVerbose (name + " -- ${builtins.toString n}") (builtins.head matches);
+    ];
+    phases = [ "installPhase" ];
+    installPhase = ''
+      awk -F': ' '\
+        BEGIN   { print "[ {" } \
+        NR>1 && /^Package: / { print "} {"; } \
+        /: /    { printf "%s = \"%s\";\n", $1, $2 } \
+        END     { print "} ]" }' $srcs > $out
+    '';
+  };
+
+  aptPackages = import aptPackageIndex;
 
   apthost = "https://apt.repos.intel.com/oneapi/";
+
+  getSum = pkgList: name:
+  let
+    matches = lib.filter (x: name == x.Package) pkgList;
+    #n = lib.length matches;
+    #match = builtins.trace (name + " -- ${builtins.toString n}") (lib.elemAt matches 0);
+    match = lib.elemAt matches 0;
   in
-    {
+    match.SHA256;
-      url = apthost + match.filename;
+
-      sha256 = match.sha256;
+  getUrl = pkgList: name:
-    };
+  let
+    matches = lib.filter (x: name == x.Package) pkgList;
+    #match = assert lib.length matches == 1; lib.elemAt matches 0;
+    n = lib.length matches;
+    match =
+      #builtins.trace (name + " -- n=${builtins.toString n}")
+      (lib.elemAt matches 0);
+  in
+    apthost + match.Filename;
 
   uncompressDebs = debs: name: stdenv.mkDerivation {
     name = name;
@@ -66,13 +87,14 @@ let
         dpkg -x $src $out
       done
     '';
-
-    inherit meta;
   };
 
   joinDebs = name: names:
   let
-    debs = builtins.map (x: builtins.fetchurl (findMatch x)) names;
+    urls = builtins.map (x: getUrl aptPackages x) names;
+    sums = builtins.map (x: getSum aptPackages x) names;
+    getsrc = url: sha256: builtins.fetchurl { inherit url sha256; };
+    debs = lib.zipListsWith getsrc urls sums;
   in
     uncompressDebs debs "${name}-source";
 
@@ -99,7 +121,6 @@ let
 
     phases = [ "installPhase" "fixupPhase" ];
     dontStrip = true;
-    strictDeps = true;
     installPhase = ''
       mkdir -p $out/{bin,etc,lib,include}
       mkdir -p $out/share/man
@@ -124,8 +145,6 @@ let
         sed -i "s:I_MPI_SUBSTITUTE_INSTALLDIR:$out:g" "$i"
       done
     '';
-
-    inherit meta;
   };
 
   intel-tbb = stdenv.mkDerivation rec {
@@ -151,7 +170,6 @@ let
     ];
     phases = [ "installPhase" "fixupPhase" ];
     dontStrip = true;
-    strictDeps = true;
 
     autoPatchelfIgnoreMissingDeps = [ "libhwloc.so.5" ];
 
@@ -165,8 +183,6 @@ let
         rsync -a lib/intel64/gcc4.8/ $out/lib/
       popd
     '';
-
-    inherit meta;
   };
 
   intel-compiler-shared = stdenv.mkDerivation rec {
@@ -195,7 +211,6 @@ let
     ];
     phases = [ "installPhase" "fixupPhase" ];
     dontStrip = true;
-    strictDeps = true;
 
     autoPatchelfIgnoreMissingDeps = [ "libsycl.so.6" ];
 
@@ -225,8 +240,6 @@ let
         popd
       popd
     '';
-
-    inherit meta;
   };
 
 
@@ -263,7 +276,6 @@ let
     phases = [ "installPhase" "fixupPhase" ];
 
     dontStrip = true;
-    strictDeps = true;
 
     installPhase = ''
       mkdir -p $out/{bin,lib,include}
@@ -293,8 +305,6 @@ let
         ln -s $out/lib $out/lib_lin
       popd
     '';
-
-    inherit meta;
   };
 
   intel-compiler = stdenv.mkDerivation rec {
@@ -352,7 +362,6 @@ let
     phases = [ "installPhase" "fixupPhase" ];
 
     dontStrip = true;
-    strictDeps = true;
 
     installPhase = ''
       mkdir -p $out/{bin,lib}
@@ -383,8 +392,6 @@ let
         rsync -a documentation/en/man/common/ $out/share/man/
       popd
     '';
-
-    inherit meta;
   };
 
   wrapIntel = { cc, mygcc, extraBuild ? "", extraInstall ? "" }:
@@ -446,7 +453,7 @@ let
     '';
   };
 
-  ifort-wrapper = wrapIntel {
+  ifort-wrapper = wrapIntel rec {
     cc = intel-compiler-fortran;
     mygcc = gcc;
     extraBuild = ''

pkgs/intel-oneapi/packages.nix

@@ -1,297 +0,0 @@
-{
-  lib,
-  stdenv,
-  callPackage,
-  dpkg,
-  fetchurl,
-
-  sqlite,
-  elfutils,
-}:
-
-let
-  inherit (builtins)
-    attrNames
-    attrValues
-    concatMap
-    elem
-    filter
-    fromJSON
-    getAttr
-    groupBy
-    head
-    isNull
-    listToAttrs
-    map
-    mapAttrs
-    readFile
-    replaceStrings
-    splitVersion
-    ;
-  inherit (lib)
-    converge
-    findFirst
-    groupBy'
-    hasPrefix
-    optional
-    pipe
-    take
-    toInt
-    toList
-    versionAtLeast
-    versionOlder
-    ;
-
-  aptData = fromJSON (readFile ./packages.json);
-
-  # Compare versions in debian control file syntax
-  # See: https://www.debian.org/doc/debian-policy/ch-relationships.html#syntax-of-relationship-fields
-  #
-  # NOTE: this is not a proper version comparison
-  #
-  # A proper version solver, should aggregate dependencies with the same name
-  # and compute the constraint (e.g. a (>= 2) a (<< 5) -> 2 <= a << 5)
-  #
-  # But in the intel repo, there are no such "duplicated" dependencies to specify
-  # upper limits, which leads to issues when intel-hpckit-2021 depends on things
-  # like intel-basekit >= 2021.1.0-2403 and we end up installing the newest
-  # basekit instead of the one from 2021.
-  #
-  # To mitigate this, >= is set to take the latest version with matching major
-  # and minor (only revision and patch are allowed to change)
-  compareVersions =
-    got: kind: want:
-    let
-      g0 = take 2 (splitVersion got);
-      w0 = take 2 (splitVersion want);
-    in
-    if isNull want then
-      true
-    else if kind == "=" then
-      got == want
-    else if kind == "<<" then
-      versionOlder got want
-    else if kind == "<=" then
-      versionAtLeast want got
-    else if kind == ">>" then
-      versionOlder want got
-    else if kind == ">=" then
-      (g0 == w0) && versionAtLeast got want # always match major version
-    else
-      throw "unknown operation: ${kind}";
-
-  findMatching =
-    {
-      pname,
-      kind,
-      version,
-    }:
-    findFirst (x: pname == x.pname && compareVersions x.version kind version) null aptData;
-
-  isIntel = pkg: (hasPrefix "intel-" pkg.pname);
-
-  expandDeps =
-    pkg: (map findMatching (filter isIntel pkg.dependencies)) ++ (optional (pkg.size != 0) pkg);
-
-  # get the oldest by major version. If they have the same major version, take
-  # the newest. This prevents most issues with resolutions
-  # versionOlder b a -> true if b is older than a (b `older` a)
-  getNewerInMajor =
-    a: b:
-    let
-      va = a.version;
-      vb = b.version;
-      va0 = head (splitVersion va);
-      vb0 = head (splitVersion vb);
-    in
-    if isNull a then
-      b
-    else if va0 != vb0 then
-      if va0 > vb0 then b else a
-    else if versionOlder vb va then
-      a
-    else
-      b;
-  removeDups = l: attrValues (groupBy' getNewerInMajor null (getAttr "provides") l);
-
-  _resolveDeps = converge (l: removeDups (concatMap expandDeps l));
-  resolveDeps =
-    pkg:
-    let
-      deps = _resolveDeps (toList pkg);
-      namedDeps = (map (x: "${x.pname}-${x.version}") deps);
-    in
-    builtins.traceVerbose (builtins.deepSeq namedDeps namedDeps) deps;
-
-  blacklist = [
-    "intel-basekit-env"
-    "intel-basekit-getting-started"
-    "intel-hpckit-env"
-    "intel-hpckit-getting-started"
-    "intel-oneapi-advisor"
-    "intel-oneapi-common-licensing"
-    "intel-oneapi-common-oneapi-vars"
-    "intel-oneapi-common-vars"
-    "intel-oneapi-compiler-cpp-eclipse-cfg"
-    "intel-oneapi-compiler-dpcpp-eclipse-cfg"
-    "intel-oneapi-condaindex"
-    "intel-oneapi-dev-utilities-eclipse-cfg"
-    "intel-oneapi-dpcpp-ct-eclipse-cfg"
-    "intel-oneapi-eclipse-ide"
-    "intel-oneapi-hpc-toolkit-getting-started"
-    "intel-oneapi-icc-eclipse-plugin-cpp"
-    "intel-oneapi-vtune"
-    "intel-oneapi-vtune-eclipse-plugin-vtune"
-  ];
-
-  isInBlacklist = pkg: elem pkg.provides blacklist;
-  removeBlacklist = filter (e: !(isInBlacklist e));
-
-  dpkgExtractAll =
-    pname: version:
-    { srcs, deps }:
-    stdenv.mkDerivation {
-      inherit pname version srcs;
-
-      nativeBuildInputs = [ dpkg ];
-      phases = [ "installPhase" ];
-
-      passthru = { inherit deps; };
-
-      installPhase = ''
-        mkdir -p $out
-        for src in $srcs; do
-          echo "Unpacking $src"
-          dpkg -x $src $out
-        done
-      '';
-    };
-
-  apthost = "https://apt.repos.intel.com/oneapi/";
-  fetchDeb =
-    p:
-    fetchurl {
-      url = apthost + p.filename;
-      inherit (p) sha256;
-    };
-
-  buildIntel =
-    pkg:
-    pipe pkg [
-      resolveDeps
-      removeBlacklist
-      (l: {
-        srcs = map fetchDeb l;
-        deps = l;
-      })
-      (dpkgExtractAll "${pkg.provides}-extracted" pkg.version)
-    ];
-
-  findHpcKit =
-    year:
-    findMatching {
-      pname = "intel-hpckit";
-      kind = "<<";
-      version = toString (year + 1);
-    };
-  years = map toInt (attrNames components);
-
-  patchIntel = callPackage ./patch_intel.nix { };
-
-  # Version information for each hpckit. This is used to normalize the paths
-  # so that files are in $out/{bin,lib,include...} instead of all over the place
-  # in $out/opt/intel/oneapi/*/*/{...}.
-  #
-  # The most important is the compiler component, which is used to build the
-  # stdenv for the hpckit.
-  #
-  # NOTE: this have to be manually specified, so we can avoid IFD. To add a
-  # new version, add a new field with an empty attrset, (e.g. "2026" = {}; ),
-  # build hpckit_2026.unpatched and use the values from
-  # result/opt/intel/oneapi/* to populate the attrset.
-  #
-  # WARN: if there are more than one version in the folders of the unpatched
-  # components, our dependency resolution hacks have probably failed and the
-  # package set may be broken.
-  components = {
-    "2025" = {
-      ishmem = "1.4";
-      pti = "0.13";
-      tcm = "1.4";
-      umf = "0.11";
-
-      ccl = "2021.16";
-      compiler = "2025.2";
-      dal = "2025.8";
-      debugger = "2025.2";
-      dev-utilities = "2025.2";
-      dnnl = "2025.2";
-      dpcpp-ct = "2025.2";
-      dpl = "2022.9";
-      ipp = "2022.2";
-      ippcp = "2025.2";
-      mkl = "2025.2";
-      mpi = "2021.16";
-      tbb = "2022.2";
-    };
-    "2024" = {
-      tcm = "1.1";
-
-      ccl = "2021.13";
-      compiler = "2024.2";
-      dal = "2024.6";
-      debugger = "2024.2";
-      dev-utilities = "2024.2";
-      diagnostics = "2024.2";
-      dnnl = "2024.2";
-      dpcpp-ct = "2024.2";
-      dpl = "2022.6";
-      ipp = "2021.12";
-      ippcp = "2021.12";
-      mkl = "2024.2";
-      mpi = "2021.13";
-      tbb = "2021.13";
-
-      extraPackages = [
-        sqlite
-        elfutils
-      ];
-    };
-  };
-
-  replaceDots = replaceStrings [ "." ] [ "_" ];
-
-in
-lib.recurseIntoAttrs (
-  listToAttrs (
-    map (
-      year:
-      let
-        year_str = toString year;
-      in
-      {
-        name = "hpckit_${year_str}";
-        value = patchIntel {
-          unpatched = buildIntel (findHpcKit year);
-          components = components.${year_str};
-        };
-      }
-    ) years
-  )
-)
-// {
-  apt = pipe aptData [
-    (groupBy (p: replaceDots p.provides))
-    (mapAttrs (
-      _: l:
-      listToAttrs (
-        map (pkg: {
-          name = replaceDots ("v" + pkg.version);
-          value = pkg;
-        }) l
-      )
-    ))
-  ];
-
-  inherit resolveDeps patchIntel buildIntel;
-}

pkgs/intel-oneapi/patch_intel.nix

@@ -1,199 +0,0 @@
-{
-  stdenv,
-  stdenvNoCC,
-  lib,
-  symlinkJoin,
-  autoPatchelfHook,
-  wrapCCWith,
-  overrideCC,
-  gcc,
-  hwloc,
-  libelf,
-  libffi_3_3,
-  libpsm2,
-  libuuid,
-  libxml2,
-  numactl,
-  ocl-icd,
-  openssl,
-  python3,
-  rdma-core,
-  ucx,
-  zlib,
-  writeTextFile,
-}:
-
-lib.makeOverridable (
-  {
-    unpatched,
-    components ? { },
-    extraPackages ? components.extraPackages or [ ],
-  }:
-
-  let
-    inherit (builtins)
-      attrValues
-      filter
-      mapAttrs
-      removeAttrs
-      ;
-
-    __components = removeAttrs components [ "extraPackages" ];
-    _components = __components;
-    # _components = lib.traceSeqN 2 {
-    #   inherit unpatched __components;
-    #   deps = builtins.map (x: "${x.pname}-${x.version}") unpatched.deps;
-    # } __components;
-
-    wrapIntel =
-      cc:
-      let
-        targetConfig = stdenv.targetPlatform.config;
-      in
-      (wrapCCWith {
-        inherit cc;
-
-        nixSupport = {
-          cc-ldflags = [
-            "-L${gcc.cc}/lib/gcc/${targetConfig}/${gcc.version}"
-            "-L${gcc.cc.lib}/lib"
-            "-L${cc}/lib"
-          ];
-          cc-cflags = [
-            "--gcc-toolchain=${gcc.cc}"
-            "-isystem \"${cc.original}/lib/clang/*/include\""
-            "-isystem ${cc}/include"
-            "-isystem ${cc}/include/intel64"
-            "-isystem ${gcc.cc}/lib/gcc/${targetConfig}/${gcc.version}/include"
-          ];
-          libcxx-cxxflags = [
-            # "--gcc-toolchain=${gcc.cc}"
-            "-isystem ${gcc.cc}/include/c++/${gcc.version}"
-            "-isystem ${gcc.cc}/include/c++/${gcc.version}/${targetConfig}"
-          ];
-        };
-
-        extraBuildCommands = ''
-          # FIXME: We should find a better way to modify the PATH instead of using
-          # this ugly hack. See https://jungle.bsc.es/git/rarias/bscpkgs/issues/9
-          echo 'path_backup="${gcc.cc}/bin:$path_backup"' >>$out/nix-support/cc-wrapper-hook
-
-          # Disable hardening by default
-          echo "" > $out/nix-support/add-hardening.sh
-
-          wrap icx  $wrapper $ccPath/icx
-          wrap icpx $wrapper $ccPath/icpx
-          wrap ifx  $wrapper $ccPath/ifx
-
-          ln -s $out/bin/icpx $out/bin/c++
-          ln -s $out/bin/icx  $out/bin/cc
-
-          ln -s $ccPath/sycl-ls $out/bin/sycl-ls
-          ln -s $ccPath/sycl-trace $out/bin/sycl-trace
-
-          sed -i 's/.*isCxx=0/isCxx=1/' $out/bin/icpx
-
-          # Use this to detect when a compiler subprocess is called
-          # from icpx (--fsycl-host-compiler)
-          echo 'export NIX_CC_WRAPPER_INTEL=1' >>$out/nix-support/cc-wrapper-hook
-
-          # oneMath looks for sycl libraries in bin/../lib
-          ln -s ${cc}/lib $out/lib
-          ln -s ${cc}/include $out/include
-        '';
-      }).overrideAttrs
-        (old: {
-          installPhase = old.installPhase + ''
-            export named_cc="icx"
-            export named_cxx="icpx"
-            export named_fc="ifx"
-          '';
-        });
-
-  in
-  stdenvNoCC.mkDerivation (finalAttrs: {
-    pname = lib.removeSuffix "-extracted" unpatched.pname;
-    inherit (unpatched) version;
-    src = unpatched;
-
-    phases = [
-      "installPhase"
-      "fixupPhase"
-    ];
-    buildInputs = [
-      libffi_3_3
-      libelf
-      libxml2
-      hwloc
-      numactl
-      libuuid
-      libpsm2
-      zlib
-      ocl-icd
-      rdma-core
-      ucx
-      openssl
-      python3
-      stdenv.cc.cc.lib
-    ]
-    ++ extraPackages;
-
-    autoPatchelfIgnoreMissingDeps = [
-      "libhwloc.so.5"
-      "libcuda.so.1"
-      "libze_loader.so.1"
-    ];
-
-    # There are broken symlinks that go outside packages, ignore them
-    dontCheckForBrokenSymlinks = true;
-
-    nativeBuildInputs = [ autoPatchelfHook ];
-    installPhase = ''
-      cp -r $src/opt/intel/oneapi/ $out
-    '';
-
-    passthru =
-      let
-        pkgs = mapAttrs (
-          folder: version:
-          let
-            original = "${finalAttrs.finalPackage}/${folder}/${version}";
-
-            etc-vendors = writeTextFile {
-              name = "intel-ocl-icd";
-              text = "${original}/lib/libintelocl.so";
-              destination = "/etc/OpenCL/vendors/intel.icd";
-            };
-          in
-          symlinkJoin {
-            pname = "intel-${folder}";
-            inherit version;
-            paths = [ original ] ++ lib.optionals (folder == "compiler") [ etc-vendors ];
-            passthru = { inherit original; };
-          }
-        ) _components;
-      in
-      pkgs
-      // {
-        inherit unpatched;
-        pkgs = lib.recurseIntoAttrs pkgs;
-        components = _components;
-
-        # This contains all packages properly symlinked into toplevel directories
-        # in $out.
-        #
-        # NOTE: there are clashes with packages that have symlinks outside their
-        # scope (libtcm and env/vars.sh)
-        all = symlinkJoin {
-          pname = finalAttrs.finalPackage.pname + "-symlinked";
-          inherit (finalAttrs.finalPackage) version;
-          paths = filter lib.isDerivation (attrValues finalAttrs.finalPackage.pkgs);
-        };
-
-        stdenv = overrideCC stdenv finalAttrs.finalPackage.cc;
-
-        cc = wrapIntel finalAttrs.finalPackage.pkgs.compiler;
-      };
-
-  })
-)

pkgs/intel-oneapi/process.jq

@@ -1,29 +0,0 @@
-#!/usr/bin/env -S jq -f
-
-def extract_fields: {
-        pname : .Package,
-        version : .Version,
-        provides : .Package | sub("[0-9.-]*$"; ""),
-        filename : .Filename,
-        size : ."Installed-Size" | tonumber,
-        sha256 : .SHA256,
-        dependencies : .Depends,
-    } ;
-
-# parses dependencies into a list of [{.pname, .kind, .version}]
-# some dependencies do not have a version specified, in which case, kind = version = null
-#
-# example dependencies:
-# intel-oneapi-common-vars (>= 2023.0.0-25325), intel-oneapi-common-licensing-2023.0.0
-
-def split_dependencies : map(try(.dependencies |= split(",\\s?"; "")) // .dependencies |= []) ;
-
-def match_version : capture("(?<pname>[a-zA-Z0-9_\\-.]*) *(\\((?<kind>[<>=]*) *(?<version>.*)\\))?"; "") ;
-
-def parse_dependencies : map_values(.dependencies.[] |= match_version) ;
-
-def sort_version_decreasing : sort_by(.version | split("[-.]"; "") | map(tonumber)) | reverse ;
-
-map(extract_fields) | split_dependencies | parse_dependencies | sort_version_decreasing
-
-# [.[] | select(.pname == "intel-hpckit") | .version]

pkgs/intel-oneapi/toJson.awk

@@ -1,29 +0,0 @@
-#!/usr/bin/env -S awk -f
-
-BEGIN   {
-    FS=": "
-
-    prev_empty=1
-    t="  "
-
-    print "[ {"
-}
-
-!NF { # empty line, update separator so next non empty line closes the dict
-    prev_empty=1
-    t="},\n{ "
-    next # skip line (we won't match anything else)
-}
-
-{
-    printf t "\"%s\" : \"%s\"\n", $1, $2
-
-    if (prev_empty) {
-        # we were the first after a group of empty lines, following ones have to
-        # have a comma
-        prev_empty=0
-        t=", "
-    }
-}
-
-END     { print "} ]" }

pkgs/intel-oneapi/update.sh

@@ -1,11 +1,4 @@
 #!/bin/sh
 
-out_64=$(mktemp intel-api.64.XXXXXX)
+curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-amd64/Packages -o amd64-packages
-out_all=$(mktemp intel-api.all.XXXXXX)
+curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-all/Packages -o all-packages
-trap 'rm -f "$out_64" "$out_all"' EXIT INT HUP
-
-curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-amd64/Packages -o "$out_64"
-curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-all/Packages -o "$out_all"
-
-# NOTE: we use `jq -r tostring` to minify the json (3.2Mb -> 2.3Mb)
-cat "$out_64" "$out_all" | ./toJson.awk | ./process.jq | jq -r tostring >packages.json

pkgs/llvm-intel/default.nix

@@ -1,200 +0,0 @@
-{
-  stdenv,
-  lib,
-  ninja,
-  addDriverRunpath,
-  cmake,
-  emhash,
-  fetchFromGitHub,
-  khronos-ocl-icd-loader,
-  libbacktrace,
-  opencl-headers,
-  parallel-hashmap,
-  perl,
-  pkg-config,
-  python3,
-  spirv-headers,
-  spirv-tools,
-  symlinkJoin,
-  zlib,
-
-  cudaPackages,
-  enableCuda ? true,
-}:
-
-let
-  version = "6.2.1";
-  src = fetchFromGitHub {
-    owner = "intel";
-    repo = "llvm";
-    tag = "v${version}";
-    sha256 = "sha256-j8+DmGKO0qDF5JjH+DlkLKs1kBz6dS7ukwySd/Crqv0=";
-  };
-
-  pinned = {
-    inherit parallel-hashmap;
-
-    vc-intrinsics.src = fetchFromGitHub {
-      owner = "intel";
-      repo = "vc-intrinsics";
-      rev = "4e51b2467104a257c22788e343dafbdde72e28bb";
-      sha256 = "sha256-AHXeKbih4bzmcuu+tx2TeS7Ixmk54uS1vKFVxI6ZP8g=";
-    };
-
-    unified-memory-framework.src = fetchFromGitHub {
-      owner = "oneapi-src";
-      repo = "unified-memory-framework";
-      tag = "v0.11.0";
-      sha256 = "sha256-k8QdP2u1QOoeCZ6ps4sM8+1iZq/H3q0lqCfVk8mz9KI=";
-    };
-
-    ocl-headers = opencl-headers.overrideAttrs {
-      version = "2024.10.24";
-      src = fetchFromGitHub {
-        owner = "KhronosGroup";
-        repo = "OpenCL-Headers";
-        tag = "v2024.10.24";
-        sha256 = "sha256-KDlruE0IG8d+lAChxYyc6dg5XOvqCMrMyO69sdAzejA=";
-      };
-    };
-
-    ocl-icd = khronos-ocl-icd-loader;
-
-    spirv-headers = spirv-headers.overrideAttrs {
-      version = "1.4.309.0";
-      src = fetchFromGitHub {
-        owner = "KhronosGroup";
-        repo = "SPIRV-Headers";
-        tag = "vulkan-sdk-1.4.309.0";
-        sha256 = "sha256-Q1i6i5XimULuGufP6mimwDW674anAETUiIEvDQwvg5Y=";
-      };
-    };
-  };
-
-  fetchcontent_cmakeFlags = lib.mapAttrsToList (
-    name: value: (lib.cmakeFeature "FETCHCONTENT_SOURCE_DIR_${lib.toUpper name}" (toString value.src))
-  ) pinned;
-
-  # Hack to fix #include <emhash/...>
-  emhash' = symlinkJoin {
-    name = "emhash";
-    paths = [ emhash ];
-    postBuild = ''
-      pushd $out/include
-      ln -s . emhash
-      popd
-    '';
-  };
-
-in
-stdenv.mkDerivation {
-  pname = "intel-llvm";
-  inherit src version;
-
-  enableParallelBuilding = true;
-  strictDeps = true;
-
-  nativeBuildInputs = [
-    perl
-    cmake
-    ninja
-    pkg-config
-    python3
-    spirv-tools
-    addDriverRunpath
-  ]
-  ++ lib.optionals enableCuda [
-    cudaPackages.cuda_nvcc
-  ];
-
-  buildInputs = [
-    emhash'
-    libbacktrace
-    zlib
-
-    pinned.ocl-icd
-    pinned.ocl-headers
-    pinned.spirv-headers
-  ]
-  ++ lib.optionals enableCuda [
-    cudaPackages.cudatoolkit
-  ];
-
-  patches = [ ./fix-ur.patch ]; # Has been fixed in next release
-
-  preBuild = ''
-    chmod -R u+w /build/source
-  '';
-
-  cmakeDir = "../llvm";
-
-  cmakeFlags =
-    let
-      cmakeList = name: l: lib.cmakeOptionType "list" name (builtins.concatStringsSep ";" l);
-
-      LLVM_EXTERNAL_PROJECTS = [
-        "sycl"
-        "llvm-spirv"
-        "opencl"
-        "xpti"
-        "xptifw"
-        "compiler-rt"
-        "sycl-jit"
-      ]
-      ++ lib.optionals enableCuda [
-        "libclc"
-      ];
-    in
-    [
-      (lib.cmakeBool "LLVM_ENABLE_ASSERTIONS" true)
-
-      (cmakeList "LLVM_TARGETS_TO_BUILD" (
-        [
-          "host"
-          "SPIRV"
-        ]
-        ++ lib.optionals enableCuda [ "NVPTX" ]
-      ))
-      (cmakeList "LLVM_EXTERNAL_PROJECTS" LLVM_EXTERNAL_PROJECTS)
-      (cmakeList "LLVM_ENABLE_PROJECTS" ([ "clang" ] ++ LLVM_EXTERNAL_PROJECTS))
-
-      (lib.cmakeBool "UR_USE_EXTERNAL_UMF" false)
-      (lib.cmakeOptionType "path" "UR_OPENCL_INCLUDE_DIR" (toString pinned.ocl-headers))
-      (lib.cmakeOptionType "path" "UR_OPENCL_ICD_LOADER_LIBRARY" (toString pinned.ocl-icd))
-      (lib.cmakeFeature "UR_OPENCL_ICD_LOADER_LIBRARY" (toString pinned.ocl-icd))
-
-      (lib.cmakeBool "BUILD_SHARED_LIBS" false)
-      (lib.cmakeBool "LLVM_BUILD_TOOLS" true)
-      (lib.cmakeBool "LLVM_ENABLE_ZSTD" true)
-      (lib.cmakeBool "LLVM_USE_STATIC_ZSTD" true)
-      (lib.cmakeBool "LLVM_ENABLE_DOXYGEN" false)
-      (lib.cmakeBool "LLVM_ENABLE_LLD" false)
-      (lib.cmakeBool "LLVM_ENABLE_SPHINX" false)
-      (lib.cmakeBool "LLVM_SPIRV_ENABLE_LIBSPIRV_DIS" false)
-      (lib.cmakeBool "SYCL_ENABLE_WERROR" false)
-      (lib.cmakeBool "SYCL_INCLUDE_TESTS" false)
-      (lib.cmakeBool "SYCL_ENABLE_EXTENSION_JIT" true)
-      (lib.cmakeBool "SYCL_ENABLE_MAJOR_RELEASE_PREVIEW_LIB" false)
-      (lib.cmakeBool "SYCL_ENABLE_XPTI_TRACING" true)
-      (lib.cmakeBool "XPTI_ENABLE_WERROR" false)
-
-      (cmakeList "SYCL_ENABLE_BACKENDS" ([ "opencl" ] ++ lib.optionals enableCuda [ "cuda" ]))
-    ]
-    ++ fetchcontent_cmakeFlags
-    ++ lib.optionals enableCuda [
-      (lib.cmakeOptionType "list" "LIBCLC_TARGETS_TO_BUILD" "nvptx64--nvidiacl")
-      (lib.cmakeBool "LIBCLC_GENERATE_REMANGLED_VARIANTS" true)
-      (lib.cmakeBool "LIBCLC_NATIVECPU_HOST_TARGET" false)
-    ];
-
-  meta = {
-    homepage = "https://github.com/intel/llvm";
-    description = "Intel staging area for llvm.org contribution";
-    maintainers = with lib.maintainers.bsc; [ abonerib ];
-    platforms = lib.platforms.linux;
-    license = [
-      lib.licenses.asl20
-      lib.licenses.llvm-exception
-    ];
-  };
-}

pkgs/llvm-intel/fix-ur.patch

@@ -1,23 +0,0 @@
-diff --git a/unified-runtime/source/adapters/cuda/CMakeLists.txt b/unified-runtime/source/adapters/cuda/CMakeLists.txt
-index a8401c71a..2ab363926 100644
---- a/unified-runtime/source/adapters/cuda/CMakeLists.txt
-+++ b/unified-runtime/source/adapters/cuda/CMakeLists.txt
-@@ -62,14 +62,14 @@ add_library(cudadrv SHARED IMPORTED GLOBAL)
- if (WIN32)
-   set_target_properties(
-     cudadrv PROPERTIES 
--      IMPORTED_IMPLIB               ${CUDA_cuda_driver_LIBRARY}
--      INTERFACE_INCLUDE_DIRECTORIES ${CUDAToolkit_INCLUDE_DIRS}
-+      IMPORTED_IMPLIB               "${CUDA_cuda_driver_LIBRARY}"
-+      INTERFACE_INCLUDE_DIRECTORIES "${CUDAToolkit_INCLUDE_DIRS}"
-   )
- else()
-   set_target_properties(
-     cudadrv PROPERTIES 
--      IMPORTED_LOCATION             ${CUDA_cuda_driver_LIBRARY}
--      INTERFACE_INCLUDE_DIRECTORIES ${CUDAToolkit_INCLUDE_DIRS}
-+      IMPORTED_LOCATION             "${CUDA_cuda_driver_LIBRARY}"
-+      INTERFACE_INCLUDE_DIRECTORIES "${CUDAToolkit_INCLUDE_DIRS}"
-   )
- endif()
- 

pkgs/llvm-ompss2/clang.nix

@@ -16,19 +16,19 @@
 , useGit ? false
 , gitUrl ? "ssh://git@bscpm04.bsc.es/llvm-ompss/llvm-mono.git"
 , gitBranch ? "master"
-, gitCommit ? "872ba63f86edaefc9787984ef3fae9f2f94e0124" # github-release-2025.11
+, gitCommit ? "880e2341c56bad1dc14e8c369fb3356bec19018e"
 }:
 
 let
   stdenv = llvmPackages_latest.stdenv;
 
   release = rec {
-    version = "2025.11";
+    version = "2025.06";
     src = fetchFromGitHub {
       owner = "bsc-pm";
       repo = "llvm";
       rev = "refs/tags/github-release-${version}";
-      hash = "sha256-UgwMTUkM9Z87dDH205swZFBeFhrcbLAxginViG40pBM=";
+      hash = "sha256-ww9PpRmtz/M9IyLiZ8rAehx2UW4VpQt+svf4XfKBzKo=";
     };
   };
 
@@ -48,7 +48,6 @@ in stdenv.mkDerivation {
   inherit (source) src version;
 
   enableParallelBuilding = true;
-  strictDeps = true;
 
   passthru = {
     CC = "clang";
@@ -127,12 +126,4 @@ in stdenv.mkDerivation {
 # nanos6 installation, but this is would require a recompilation of clang each
 # time nanos6 is changed. Better to use the environment variable NANOS6_HOME,
 # and specify nanos6 at run time.
-
-  meta = {
-    homepage = "https://gitlab.pm.bsc.es/llvm-ompss/llvm-mono";
-    description = "C language family frontend for LLVM (for OmpSs-2)";
-    maintainers = with lib.maintainers.bsc; [ rpenacob ];
-    platforms = lib.platforms.linux;
-    license = [ lib.licenses.asl20 lib.licenses.llvm-exception ];
-  };
 }

pkgs/llvm-ompss2/default.nix

@@ -3,7 +3,6 @@
 , lib
 , gcc
 , clangOmpss2Unwrapped
-, writeShellScript
 , openmp ? null
 , wrapCCWith
 , llvmPackages_latest
@@ -28,17 +27,20 @@ let
   # We need to replace the lld linker from bintools with our linker just built,
   # otherwise we run into incompatibility issues when mixing compiler and linker
   # versions.
-  bintools-unwrapped = llvmPackages_latest.bintools-unwrapped.override {
+  bintools-unwrapped = llvmPackages_latest.tools.bintools-unwrapped.override {
     lld = clangOmpss2Unwrapped;
   };
-  bintools = llvmPackages_latest.bintools.override {
+  bintools = llvmPackages_latest.tools.bintools.override {
     bintools = bintools-unwrapped;
   };
   targetConfig = stdenv.targetPlatform.config;
   inherit gcc;
   cc = clangOmpss2Unwrapped;
   gccVersion = with versions; let v = gcc.version; in concatStringsSep "." [(major v) (minor v) (patch v)];
-
+in wrapCCWith {
+  inherit cc bintools;
+  # extraPackages adds packages to depsTargetTargetPropagated
+  extraPackages = optional (openmp != null) openmp;
   extraBuildCommands = ''
     echo "-target ${targetConfig}" >> $out/nix-support/cc-cflags
     echo "-B${gcc.cc}/lib/gcc/${targetConfig}/${gccVersion}" >> $out/nix-support/cc-cflags
@@ -55,9 +57,8 @@ let
     echo "--gcc-toolchain=${gcc}" >> $out/nix-support/cc-cflags
 
     wrap clang++  $wrapper $ccPath/clang++
-  '';
 
-  envExports = lib.optionalString (openmp != null) ''
+  '' + optionalString (openmp != null) ''
     echo "export OPENMP_RUNTIME=${ompname}" >> $out/nix-support/cc-wrapper-hook
   '' + optionalString (ompss2rt != null) ''
     echo "export OMPSS2_RUNTIME=${rtname}" >> $out/nix-support/cc-wrapper-hook
@@ -65,40 +66,5 @@ let
   '' + optionalString (ompss2rt != null && ompss2rt.pname == "nodes") ''
     echo "export NOSV_HOME=${ompss2rt.nosv}" >> $out/nix-support/cc-wrapper-hook
   '';
+}
 
-  extraPackages = optional (openmp != null) openmp;
-
-  wrappedCC = wrapCCWith {
-    # extraPackages adds packages to depsTargetTargetPropagated
-    inherit cc bintools extraPackages;
-    extraBuildCommands = extraBuildCommands + envExports;
-  };
-
-  resetIntelCCFlags = let tconf = builtins.replaceStrings ["-"] ["_"] targetConfig;
-  in writeShellScript "remove-intel.sh" ''
-    if [ "''${NIX_CC_WRAPPER_INTEL:-0}" = 1 ]; then
-      unset NIX_CFLAGS_COMPILE_${tconf}
-      unset NIX_CC_WRAPPER_FLAGS_SET_${tconf}
-
-      if (( "''${NIX_DEBUG:-0}" >= 1 )); then
-        echo "ompss2: cleaned NIX_CFLAGS_COMPILE_${tconf} (invokation from intel compiler detected)"
-      fi
-    fi
-  '';
-
-  intelExtraBuildCommands = ''
-    sed -i 's|# Flirting.*|source ${resetIntelCCFlags}\n\n&|' $out/bin/clang
-    sed -i 's|# Flirting.*|source ${resetIntelCCFlags}\n\n&|' $out/bin/clang++
-  '';
-
-  wrappedCCIntel = wrapCCWith {
-    inherit cc bintools extraPackages;
-    # extraPackages adds packages to depsTargetTargetPropagated
-    extraBuildCommands = intelExtraBuildCommands + envExports;
-  };
-
-in wrappedCC.overrideAttrs (oldAttrs: {
-    passthru = oldAttrs.passthru // {
-      forIcpx = wrappedCCIntel;
-    };
-  })

pkgs/llvm-ompss2/openmp.nix

@@ -39,9 +39,7 @@ stdenv.mkDerivation rec {
     perl
     pkg-config
     python3
-  ];
+  ] ++ lib.optionals enableNosv [
-
-  buildInputs = lib.optionals enableNosv [
     nosv
   ] ++ lib.optionals enableOvni [
     ovni
@@ -56,7 +54,6 @@ stdenv.mkDerivation rec {
   dontStrip = enableDebug;
 
   separateDebugInfo = true;
-  strictDeps = true;
 
   cmakeFlags = [
     "-DLIBOMP_OMPD_SUPPORT=OFF"
@@ -74,38 +71,8 @@ stdenv.mkDerivation rec {
     rm -f $out/libllvmrt/libomp.*
   '';
 
-  doInstallCheck = true;
-  # There are not cmake flags to force nOS-V, it enables it when found through
-  # pkg-config. If enableNosv is set, but we fail to find it at build time,
-  # the build will succeed but won't use nOS-V (libompv won't be created).
-  # This is a sanity check to ensure that after install we have the proper
-  # files.
-  installCheckPhase =
-    if enableNosv then
-      ''
-        test -f $out/lib/libompv.so
-        test -f $out/libllvmrt/libompv.so
-        test ! -f $out/lib/libomp.so
-        test ! -f $out/libllvmrt/libomp.so
-      ''
-    else
-      ''
-        test -f $out/lib/libomp.so
-        test -f $out/libllvmrt/libomp.so
-        test ! -f $out/lib/libompv.so
-        test ! -f $out/libllvmrt/libompv.so
-      '';
-
   passthru = {
     inherit nosv;
   };
-
-  meta = {
-    homepage = "https://gitlab.pm.bsc.es/llvm-ompss/llvm-mono";
-    description = "Support for the OpenMP language (with nOS-V)";
-    maintainers = with lib.maintainers.bsc; [ rpenacob ];
-    platforms = lib.platforms.linux;
-    license = [ lib.licenses.asl20 lib.licenses.llvm-exception ];
-  };
 }
 

pkgs/lmbench/default.nix

@@ -27,7 +27,6 @@ stdenv.mkDerivation rec {
   hardeningDisable = [ "all" ];
 
   enableParallelBuilding = false;
-  strictDeps = true;
 
   preBuild = ''
     makeFlagsArray+=(
@@ -43,9 +42,8 @@ stdenv.mkDerivation rec {
 
   meta = {
     description = "lmbench";
-    homepage = "https://github.com/intel/lmbench";
+    homepage = "http://www.bitmover.com/lmbench/";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
+    maintainers = [ ];
     platforms = lib.platforms.all;
-    license = lib.licenses.gpl2Plus;
   };
 }

pkgs/maintainers.nix

@@ -1,7 +0,0 @@
-builtins.mapAttrs (name: value: { email = name + "@bsc.es"; } // value) {
-  abonerib.name = "Aleix Boné";
-  arocanon.name = "Aleix Roca";
-  rarias.name = "Rodrigo Arias";
-  rpenacob.name = "Raúl Peñacoba";
-  varcila.name = "Vincent Arcila";
-}

pkgs/mcxx/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , fetchFromGitHub
 , autoreconfHook
 , nanos6
@@ -63,13 +62,4 @@ stdenv.mkDerivation rec {
 # Fails with "memory exhausted" with bison 3.7.1
 #    "--enable-bison-regeneration"
   ];
-
-  meta = {
-    broken = true;
-    homepage = "https://github.com/bsc-pm/mcxx";
-    description = "C/C++/Fortran source-to-source compilation infrastructure aimed at fast prototyping";
-    maintainers = with lib.maintainers.bsc; [ rpenacob ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.gpl3Plus;
-  };
 }

pkgs/mcxx/git.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , fetchFromGitHub
 , autoreconfHook
 , nanos6
@@ -58,12 +57,4 @@ stdenv.mkDerivation rec {
 # Fails with "memory exhausted" with bison 3.7.1
 #    "--enable-bison-regeneration"
   ];
-
-  meta = {
-    homepage = "https://github.com/bsc-pm/mcxx";
-    description = "C/C++/Fortran source-to-source compilation infrastructure aimed at fast prototyping";
-    maintainers = with lib.maintainers.bsc; [ rpenacob ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.gpl3Plus;
-  };
 }

pkgs/mcxx/rarias.nix

@@ -1,5 +1,4 @@
 { stdenv
-, lib
 , fetchgit
 , autoreconfHook
 , nanos6
@@ -57,12 +56,4 @@ stdenv.mkDerivation rec {
   #preBuild = ''
   #  make generate_builtins_ia32 GXX_X86_BUILTINS=${gcc}/bin/g++
   #'';
-  #
-  meta = {
-    homepage = "https://github.com/bsc-pm/mcxx";
-    description = "C/C++/Fortran source-to-source compilation infrastructure aimed at fast prototyping";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.gpl3Plus;
-  };
 }

pkgs/meteocat-exporter/default.nix

@@ -1,15 +1,12 @@
 { python3Packages, lib }:
 
-python3Packages.buildPythonApplication {
+python3Packages.buildPythonApplication rec {
   pname = "meteocat-exporter";
   version = "1.0";
 
-  pyproject = true;
-
   src = ./.;
 
   doCheck = false;
-  strictDeps = true;
 
   build-system = with python3Packages; [
     setuptools

pkgs/mpich/default.nix

@@ -6,13 +6,6 @@
 , pmix
 , gfortran
 , symlinkJoin
-# Disabled when cross-compiling
-# To fix cross compilation, we should fill the values in:
-# https://github.com/pmodels/mpich/blob/main/maint/fcrosscompile/cross_values.txt.in
-# For each arch
-, enableFortran ? stdenv.hostPlatform == stdenv.buildPlatform
-, perl
-, targetPackages
 }:
 
 let
@@ -22,13 +15,10 @@ let
     paths = [ pmix.dev pmix.out ];
   };
 in mpich.overrideAttrs (old: {
-  buildInputs = old.buildInputs ++ [
+  buildInput = old.buildInputs ++ [
     libfabric
     pmixAll
   ];
-  nativeBuildInputs = old.nativeBuildInputs ++ [
-    perl
-  ];
   configureFlags = [
     "--enable-shared"
     "--enable-sharedlib"
@@ -41,22 +31,6 @@ in mpich.overrideAttrs (old: {
   ] ++ lib.optionals (lib.versionAtLeast gfortran.version "10") [
     "FFLAGS=-fallow-argument-mismatch" # https://github.com/pmodels/mpich/issues/4300
     "FCFLAGS=-fallow-argument-mismatch"
-  ] ++ lib.optionals (!enableFortran) [
-    "--disable-fortran"
   ];
-
-  preFixup = ''
-    sed -i 's:^CC=.*:CC=${targetPackages.stdenv.cc}/bin/${targetPackages.stdenv.cc.targetPrefix}cc:' $out/bin/mpicc
-    sed -i 's:^CXX=.*:CXX=${targetPackages.stdenv.cc}/bin/${targetPackages.stdenv.cc.targetPrefix}c++:' $out/bin/mpicxx
-  '' + lib.optionalString enableFortran ''
-    sed -i 's:^FC=.*:FC=${targetPackages.gfortran or gfortran}/bin/${targetPackages.gfortran.targetPrefix or gfortran.targetPrefix}gfortran:' $out/bin/mpifort
-  '';
-
   hardeningDisable = [ "all" ];
-  strictDeps = true;
-
-  meta = old.meta // {
-    maintainers = old.meta.maintainers ++ (with lib.maintainers.bsc; [ rarias ]);
-    cross = true;
-  };
 })

pkgs/nanos6/default.nix

@@ -16,7 +16,7 @@
 , jemallocNanos6 ? null
 , cachelineBytes ? 64
 , enableGlibcxxDebug ? false
-, enablePapi ? true
+, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
 , useGit ? false
 , gitUrl ? "ssh://git@bscpm04.bsc.es/nanos6/nanos6"
 , gitBranch ? "master"
@@ -80,8 +80,7 @@ in
       (optional enableGlibcxxDebug "CXXFLAGS=-D_GLIBCXX_DEBUG") ++
       # Most nanos6 api symbols are resolved at runtime, so prefer
       # ifunc by default
-      (optional isCross "--with-symbol-resolution=ifunc") ++
+      (optional isCross "--with-symbol-resolution=ifunc");
-      (optional enablePapi "--with-papi=${papi}");
 
     postConfigure = lib.optionalString (!enableDebug) ''
       # Disable debug
@@ -96,14 +95,16 @@ in
     dontStrip = enableDebug;
     separateDebugInfo = true;
 
-    strictDeps = true;
-
     nativeBuildInputs = [
       autoconf
       automake
       libtool
       pkg-config
-    ];
+
+      # TODO: papi_version is needed for configure:
+      # ./configure: line 27378: papi_version: command not found
+      # This probably breaks cross-compilation
+    ] ++ lib.optionals enablePapi [ papi ];
 
     buildInputs = [
       boost
@@ -118,12 +119,11 @@ in
       echo "export NANOS6_HOME=$out" >> $out/nix-support/setup-hook
     '';
 
-    meta = {
+    meta = with lib; {
       homepage = "https://github.com/bsc-pm/nanos6";
       description = "Nanos6 runtime for OmpSs-2" +
         optionalString (enableDebug) " (with debug symbols)";
-      maintainers = with lib.maintainers.bsc; [ rarias ];
+      platforms = platforms.linux;
-      platforms = lib.platforms.linux;
+      license = licenses.gpl3;
-      license = lib.licenses.gpl3Plus;
     };
   })

pkgs/nanos6/jemalloc.nix

@@ -1,4 +1,4 @@
-{ jemalloc, lib }:
+{ jemalloc }:
 
 jemalloc.overrideAttrs (old: {
   configureFlags = old.configureFlags ++ [
@@ -8,6 +8,5 @@ jemalloc.overrideAttrs (old: {
   hardeningDisable = [ "all" ];
   meta = old.meta // {
     description = old.meta.description + " (for Nanos6)";
-    maintainers = (old.meta.maintainers or []) ++ (with lib.maintainers.bsc; [ rarias ]);
   };
 })

pkgs/nix-wrap/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , bashInteractive
 , busybox
 , nix
@@ -87,14 +86,5 @@ stdenv.mkDerivation rec {
     mkdir -p $out/share
     cp ${nix_conf} $out/share/nix.conf
   '';
-
-  meta = {
-    homepage = null;
-    description = "nix bubblewrap wrapper";
-    maintainers = [ ];
-    broken = true;
-    platforms = lib.platforms.linux;
-    license = lib.licenses.mit;
-  };
 }
 

pkgs/nixgen/default.nix

@@ -1,23 +0,0 @@
-{
-  stdenv
-, lib
-}:
-
-stdenv.mkDerivation {
-  pname = "nixgen";
-  version = "0.0.1";
-  src = ./nixgen;
-  dontUnpack = true;
-  strictDeps = true;
-  phases = [ "installPhase" ];
-  installPhase = ''
-    mkdir -p $out/bin
-    cp -a $src $out/bin/nixgen
-  '';
-  meta = {
-    description = "Quickly generate flake.nix from command line";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.gpl3Plus;
-  };
-}

pkgs/nixgen/nixgen

@@ -1,97 +0,0 @@
-#!/bin/sh
-#
-# Copyright (c) 2025, Barcelona Supercomputing Center (BSC)
-# SPDX-License-Identifier: GPL-3.0+
-# Author: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
-
-function usage() {
-  echo "USAGE: nixgen [-f] [package [...]] [-b package [...]]" >&2
-  echo "  Generates a flake.nix file with the given packages." >&2
-  echo "  After flake.nix is created, use 'nix develop' to enter the shell." >&2
-  echo "OPTIONS" >&2
-  echo "  -f               Overwrite existing flake.nix (default: no)." >&2
-  echo "  packages...      Add these packages to the shell." >&2
-  echo "  -b packages...   Add the dependencies needed to build these packages." >&2
-  echo "EXAMPLE" >&2
-  echo "  $ nixgen ovni bigotes -b nosv tampi" >&2
-  echo "  Adds the packages ovni and bigotes as well as all required dependencies" >&2
-  echo "  to build nosv and tampi." >&2
-  echo "AUTHOR" >&2
-  echo "  Rodrigo Arias Mallo <rodrigo.arias@bsc.es>" >&2
-  exit 1
-}
-
-mode=package
-packages=
-inputsFrom=
-force=
-
-if [[ $# -eq 0 ]]; then
-  usage
-fi
-
-while [[ $# -gt 0 ]]; do
-    case $1 in -b)
-      mode=build
-      shift
-      ;;
-    -f)
-      force=1
-      shift
-      ;;
-    -h)
-      usage
-      ;;
-    -*|--*)
-      echo "error: unknown option $1" >&2
-      exit 1
-      ;;
-    *)
-      if [ "$mode" == "package" ]; then
-        packages+="${packages:+ }$1"
-      else
-        inputsFrom+="${inputsFrom:+ }$1"
-      fi
-      shift
-      ;;
-  esac
-done
-
-if [ ! "$force" -a -e flake.nix ]; then
-  echo "error: flake.nix exists, force overwrite with -f" >&2
-  exit 1
-fi
-
-cat > flake.nix <<EOF
-{
-  inputs.jungle.url = "git+https://jungle.bsc.es/git/rarias/jungle";
-  outputs = { self, jungle }:
-  let
-    nixpkgs = jungle.inputs.nixpkgs;
-    customOverlay = (final: prev: {
-      # Example overlay, for now empty
-    });
-    pkgs = import nixpkgs {
-      system = "x86_64-linux";
-      overlays = [
-        # Apply jungle overlay to get our BSC custom packages
-        jungle.outputs.bscOverlay
-        # And on top apply our local changes to customize for cluster
-        customOverlay
-      ];
-    };
-  in {
-    devShells.x86_64-linux.default = pkgs.mkShell {
-      pname = "devshell";
-      # Include these packages in the shell
-      packages = with pkgs; [
-        $packages
-      ];
-      # The dependencies needed to build these packages will be also included
-      inputsFrom = with pkgs; [
-        $inputsFrom
-      ];
-    };
-  };
-}
-EOF

pkgs/nixtools/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , glibc
 }:
 
@@ -16,12 +15,4 @@ stdenv.mkDerivation rec {
   makeFlags = [ "DESTDIR=$(out)" ];
   preBuild = "env";
   dontPatchShebangs = true;
-  strictDeps = true;
-
-  meta = {
-    homepage = "https://gitlab.pm.bsc.es/rarias/nixtools";
-    description = "nix bubblewrap wrapper";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-  };
 }

pkgs/nodes/default.nix

@@ -3,6 +3,7 @@
 , lib
 , fetchFromGitHub
 , pkg-config
+, perl
 , numactl
 , hwloc
 , boost
@@ -10,23 +11,22 @@
 , ovni
 , nosv
 , clangOmpss2
-, which
 , useGit ? false
 , gitUrl ? "ssh://git@gitlab-internal.bsc.es/nos-v/nodes.git"
 , gitBranch ? "master"
-, gitCommit ? "511489e71504a44381e0930562e7ac80ac69a848" # version-1.4
+, gitCommit ? "6002ec9ae6eb876d962cc34366952a3b26599ba6"
 }:
 
 with lib;
 
 let
   release = rec {
-    version = "1.4";
+    version = "1.3";
     src = fetchFromGitHub {
       owner = "bsc-pm";
       repo = "nodes";
       rev = "version-${version}";
-      hash = "sha256-+lR/R0l3fGZO3XG7whMorFW2y2YZ0ZFnLeOHyQYrAsQ=";
+      hash = "sha256-cFb9pxcjtkMmH0CsGgUO9LTdXDNh7MCqicgGWawLrsU=";
     };
   };
 
@@ -48,7 +48,6 @@ in
     enableParallelBuilding = true;
     dontStrip = true;
     separateDebugInfo = true;
-    strictDeps = true;
 
     configureFlags = [
       "--with-nosv=${nosv}"
@@ -60,7 +59,6 @@ in
     doCheck = false;
     nativeCheckInputs = [
       clangOmpss2
-      which
     ];
 
     # The "bindnow" flags are incompatible with ifunc resolution mechanism. We
@@ -83,12 +81,4 @@ in
     passthru = {
       inherit nosv;
     };
-
-    meta = {
-      homepage = "https://gitlab.bsc.es/nos-v/nodes";
-      description = "Runtime library designed to work on top of the nOS-V runtime";
-      maintainers = with lib.maintainers.bsc; [ abonerib rarias ];
-      platforms = lib.platforms.linux;
-      license = lib.licenses.gpl3Plus;
-    };
   }

pkgs/nosv/default.nix

@@ -7,25 +7,25 @@
 , numactl
 , hwloc
 , papi
-, enablePapi ? true
+, enablePapi ? stdenv.hostPlatform == stdenv.buildPlatform # Disabled when cross-compiling
 , cacheline ? 64 # bits
 , ovni ? null
 , useGit ? false
 , gitUrl ? "git@gitlab-internal.bsc.es:nos-v/nos-v.git"
 , gitBranch ? "master"
-, gitCommit ? "1108e4786b58e0feb9a16fa093010b763eb2f8e8" # version 4.0.0
+, gitCommit ? "9f47063873c3aa9d6a47482a82c5000a8c813dd8"
 }:
 
 with lib;
 
 let
   release = rec {
-    version = "4.0.0";
+    version = "3.2.0";
     src = fetchFromGitHub {
       owner = "bsc-pm";
       repo = "nos-v";
       rev = "${version}";
-      hash = "sha256-llaq73bd/YxLVKNlMebnUHKa4z3sdcsuDUoVwUxNuw8=";
+      hash = "sha256-yaz92426EM8trdkBJlISmAoG9KJCDTvoAW/HKrasvOw=";
     };
   };
 
@@ -40,17 +40,16 @@ let
 
   source = if (useGit) then git else release;
 in
-  stdenv.mkDerivation {
+  stdenv.mkDerivation rec {
     pname = "nosv";
     inherit (source) src version;
     hardeningDisable = [ "all" ];
     dontStrip = true;
     separateDebugInfo = true;
-    strictDeps = true;
     configureFlags = [
       "--with-ovni=${ovni}"
       "CACHELINE_WIDTH=${toString cacheline}"
-    ] ++ lib.optionals enablePapi [ "--with-papi=${papi}" ];
+    ];
     nativeBuildInputs = [
       autoreconfHook
       pkg-config
@@ -60,13 +59,4 @@ in
       hwloc
       ovni
     ] ++ lib.optionals enablePapi [ papi ];
-    patches = [ ./fix-papi.patch ];
-
-    meta = {
-      homepage = "https://gitlab.bsc.es/nos-v/nos-v";
-      description = "Tasking library enables the co-execution of multiple applications with system-wide scheduling and a centralized management of resources";
-      maintainers = with lib.maintainers.bsc; [ abonerib rarias ];
-      platforms = lib.platforms.linux;
-      license = lib.licenses.gpl3Plus;
-    };
   }

pkgs/nosv/fix-papi.patch

@@ -1,136 +0,0 @@
-Commit ID: c09633f172ce4075e0a05a33f6dcbe8e03e1202a
-Change ID: onmwypnnrysktutwsvotqovzponvwrxs
-Bookmarks: fix/papi fix/papi@git fix/papi@origin
-Author   : Aleix Boné <aleix.boneribo@bsc.es> (2025-12-10 11:14:14)
-Committer: Aleix Boné <aleix.boneribo@bsc.es> (2025-12-12 12:56:48)
-
-    Improve PAPI m4 module for cross compilation
-
-diff --git a/m4/papi.m4 b/m4/papi.m4
-index de90584870..8398f856f5 100644
---- a/m4/papi.m4
-+++ b/m4/papi.m4
-@@ -1,6 +1,6 @@
- #	This file is part of Nanos6 and is licensed under the terms contained in the COPYING file.
- #
--#	Copyright (C) 2021-2022 Barcelona Supercomputing Center (BSC)
-+#	Copyright (C) 2021-2025 Barcelona Supercomputing Center (BSC)
- 
- AC_DEFUN([AC_CHECK_PAPI],
- 	[
-@@ -8,34 +8,38 @@
- 			[papi],
- 			[AS_HELP_STRING([--with-papi=prefix], [specify the installation prefix of PAPI])],
- 			[ ac_cv_use_papi_prefix=$withval ],
--			[ ac_cv_use_papi_prefix="" ]
-+			[ ac_cv_use_papi_prefix="check" ]
- 		)
- 
- 		if test x"${ac_cv_use_papi_prefix}" = x"no"; then
- 			AC_MSG_CHECKING([the PAPI installation prefix])
- 			AC_MSG_RESULT([${ac_cv_use_papi_prefix}])
- 			ac_use_papi=no
--		elif test x"${ac_cv_use_papi_prefix}" != x"" ; then
--			AC_MSG_CHECKING([the PAPI installation prefix])
--			AC_MSG_RESULT([${ac_cv_use_papi_prefix}])
--			papi_LIBS="-L${ac_cv_use_papi_prefix}/lib -lpapi -Wl,-rpath,${ac_cv_use_papi_prefix}/lib"
--			papi_CFLAGS="-I$ac_cv_use_papi_prefix/include"
--			ac_use_papi=yes
--		else
-+		elif test x"${ac_cv_use_papi_prefix}" = x""; then
-+			AC_MSG_RESULT([invalid prefix])
-+			AC_MSG_ERROR([papi prefix specified but empty])
-+		elif test x"${ac_cv_use_papi_prefix}" = x"yes" -o x"${ac_cv_use_papi_prefix}" = x"check"; then
- 			PKG_CHECK_MODULES(
- 				[papi],
--				[papi],
-+				[papi >= 5.6.0],
- 				[
- 					AC_MSG_CHECKING([the PAPI installation prefix])
- 					AC_MSG_RESULT([retrieved from pkg-config])
- 					papi_CFLAGS="${papi_CFLAGS}"
- 					ac_use_papi=yes
-+					ac_papi_version_correct=yes
- 				], [
- 					AC_MSG_CHECKING([the PAPI installation prefix])
- 					AC_MSG_RESULT([not available])
- 					ac_use_papi=no
- 				]
- 			)
-+		else
-+			AC_MSG_CHECKING([the PAPI installation prefix])
-+			AC_MSG_RESULT([${ac_cv_use_papi_prefix}])
-+			papi_LIBS="-L${ac_cv_use_papi_prefix}/lib -lpapi -Wl,-rpath,${ac_cv_use_papi_prefix}/lib"
-+			papi_CFLAGS="-I$ac_cv_use_papi_prefix/include"
-+			ac_use_papi=yes
- 		fi
- 
- 		if test x"${ac_use_papi}" = x"yes" ; then
-@@ -53,10 +57,10 @@
- 					ac_use_papi=yes
- 				],
- 				[
--					if test x"${ac_cv_use_papi_prefix}" != x"" ; then
--						AC_MSG_ERROR([PAPI cannot be found.])
-+					if test x"${ac_cv_use_papi_prefix}" = x"yes" ; then
-+						AC_MSG_ERROR([PAPI >= 5.6.0 cannot be found.])
- 					else
--						AC_MSG_WARN([PAPI cannot be found.])
-+						AC_MSG_WARN([PAPI >= 5.6.0 not available.])
- 					fi
- 					ac_use_papi=no
- 				]
-@@ -64,30 +68,38 @@
- 
- 			CFLAGS="${ac_save_CFLAGS}"
- 			LIBS="${ac_save_LIBS}"
-+		elif test x"${ac_cv_use_papi_prefix}" = x"yes" ; then
-+			AC_MSG_ERROR([PAPI >= 5.6.0 cannot be found.])
- 		fi
- 
--		if test x"${ac_use_papi}" = x"yes" ; then
--			if test x"${ac_cv_use_papi_prefix}" != x"" ; then
-+		if test x"${ac_use_papi}" = x"yes" -a x"${ac_papi_version_correct}" != x"yes" ; then
-+			if test x"${ac_cv_use_papi_prefix}" != x"yes" -a x"${ac_cv_use_papi_prefix}" != x"check" ; then
- 				papiBinary=${ac_cv_use_papi_prefix}/bin/papi_version
- 			else
- 				papiBinary=papi_version
- 			fi
--			papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
- 
--			AX_COMPARE_VERSION(
--				[[${papiVersion}]],
--				[[ge]],
--				[[5.6.0]],
--				[[ac_papi_version_correct=yes]],
--				[[ac_papi_version_correct=no]]
--			)
- 
--			if test x"${ac_papi_version_correct}" != x"yes" ; then
--				AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
--				ac_use_papi=no
-+			if test x"$cross_compiling" = x"yes" ; then
-+				AC_MSG_WARN([Cross-compiling detected, skipping PAPI version check])
- 			else
--				AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
--				AC_MSG_RESULT([${ac_papi_version_correct}])
-+				papiVersion=`$papiBinary | sed 's/[[^0-9.]]*\([[0-9.]]*\).*/\1/'`
-+
-+				AX_COMPARE_VERSION(
-+					[[${papiVersion}]],
-+					[[ge]],
-+					[[5.6.0]],
-+					[[ac_papi_version_correct=yes]],
-+					[[ac_papi_version_correct=no]]
-+				)
-+
-+				if test x"${ac_papi_version_correct}" != x"yes" ; then
-+					AC_MSG_ERROR([PAPI version must be >= 5.6.0.])
-+					ac_use_papi=no
-+				else
-+					AC_MSG_CHECKING([if the PAPI version >= 5.6.0.])
-+					AC_MSG_RESULT([${ac_papi_version_correct}])
-+				fi
- 			fi
- 		fi
- 

pkgs/onemath/default.nix

@@ -1,91 +0,0 @@
-{
-  lib,
-  fetchFromGitHub,
-  cmake,
-  withCFlags,
-  intelPackages,
-
-  mklSupport ? true,
-
-  config,
-
-  cudaSupport ? config.cudaSupport,
-  cudaPackages ? { },
-
-  rocmSupport ? config.rocmSupport,
-  hipTargets ? null, # only one target at a time supported
-  rocmPackages ? { },
-}:
-
-let
-  # rocmSupport is not enough, we need a specific target
-  enableHip = rocmSupport && hipTargets != null;
-
-  stdenv = withCFlags (lib.optionals cudaSupport [
-    "--cuda-path=${cudaPackages.cudatoolkit}"
-  ]) intelPackages.stdenv;
-in
-
-# at least one backend has to be enabled
-assert mklSupport || cudaSupport || enableHip;
-
-stdenv.mkDerivation rec {
-  pname = "oneMath";
-  version = "0.8";
-
-  src = fetchFromGitHub {
-    owner = "uxlfoundation";
-    repo = "oneMath";
-    rev = "v${version}";
-    sha256 = "sha256-xK8lKI3oqKlx3xtvdScpMq+HXAuoYCP0BZdkEqnJP5o=";
-  };
-
-  cmakeFlags = [
-    (lib.cmakeBool "ENABLE_MKLCPU_BACKEND" mklSupport)
-    (lib.cmakeBool "ENABLE_MKLGPU_BACKEND" mklSupport)
-
-    (lib.cmakeBool "ENABLE_CUBLAS_BACKEND" cudaSupport)
-    (lib.cmakeBool "ENABLE_CUFFT_BACKEND" cudaSupport)
-    (lib.cmakeBool "ENABLE_CURAND_BACKEND" cudaSupport)
-    (lib.cmakeBool "ENABLE_CUSOLVER_BACKEND" cudaSupport)
-    (lib.cmakeBool "ENABLE_CUSPARSE_BACKEND" cudaSupport)
-
-    (lib.cmakeBool "ENABLE_ROCBLAS_BACKEND" enableHip)
-    (lib.cmakeBool "ENABLE_ROCFFT_BACKEND" enableHip)
-    (lib.cmakeBool "ENABLE_ROCSOLVER_BACKEND" enableHip)
-    (lib.cmakeBool "ENABLE_ROCRAND_BACKEND" enableHip)
-    (lib.cmakeBool "ENABLE_ROCSPARSE_BACKEND" enableHip)
-
-    (lib.cmakeBool "BUILD_FUNCTIONAL_TESTS" false)
-    (lib.cmakeBool "BUILD_EXAMPLES" false)
-  ]
-  ++ lib.optionals enableHip [
-    (lib.cmakeFeature "HIP_TARGETS" hipTargets)
-  ];
-
-  nativeBuildInputs = [ cmake ];
-  buildInputs =
-    lib.optionals (mklSupport) [
-      intelPackages.mkl
-      intelPackages.tbb
-    ]
-    ++ lib.optionals (enableHip) [
-      rocmPackages.rocmPath
-      rocmPackages.rocblas
-      rocmPackages.rocfft
-      rocmPackages.rocsolver
-      rocmPackages.rocrand
-      rocmPackages.rocsparse
-    ]
-    ++ lib.optionals (cudaSupport) [
-      (lib.getDev cudaPackages.cuda_cudart)
-      cudaPackages.cudatoolkit
-
-      cudaPackages.libcublas
-      cudaPackages.libcurand
-      cudaPackages.libcufft
-      cudaPackages.libcusparse
-      cudaPackages.libcusolver
-    ];
-
-}

pkgs/osu/default.nix

@@ -24,7 +24,6 @@ stdenv.mkDerivation rec {
 
   doCheck = true;
   enableParallelBuilding = true;
-  strictDeps = true;
   nativeBuildInputs = [ mpiAll ];
   buildInputs = [ mpiAll ];
   hardeningDisable = [ "all" ];
@@ -33,11 +32,6 @@ stdenv.mkDerivation rec {
       "CXX=mpicxx"
   ];
 
-  env = {
-    MPICH_CC="${stdenv.cc}/bin/${stdenv.cc.targetPrefix}cc";
-    MPICH_CXX="${stdenv.cc}/bin/${stdenv.cc.targetPrefix}c++";
-  };
-
   postInstall = ''
     mkdir -p $out/bin
     for f in $(find $out -executable -type f); do
@@ -50,6 +44,5 @@ stdenv.mkDerivation rec {
     homepage = "http://mvapich.cse.ohio-state.edu/benchmarks/";
     maintainers = [ ];
     platforms = lib.platforms.all;
-    cross = true;
   };
 }

pkgs/ovni/default.nix

@@ -7,7 +7,7 @@
 , useGit ? false
 , gitBranch ? "master"
 , gitUrl ? "ssh://git@bscpm04.bsc.es/rarias/ovni.git"
-, gitCommit ? "06432668f346c8bdc1006fabc23e94ccb81b0d8b" # version 1.13.0
+, gitCommit ? "e4f62382076f0cf0b1d08175cf57cc0bc51abc61"
 , enableDebug ? false
 # Only enable MPI if the build is native (fails on cross-compilation)
 , useMpi ? (stdenv.buildPlatform.canExecute stdenv.hostPlatform)
@@ -15,13 +15,13 @@
 
 let
   release = rec {
-    version = "1.13.0";
+    version = "1.12.0";
     src = fetchFromGitHub {
       owner = "bsc-pm";
       repo = "ovni";
       rev = "${version}";
-      hash = "sha256-0l2ryIyWNiZqeYdVlnj/WnQGS3xFCY4ICG8JedX424w=";
+      hash = "sha256-H04JvsVKrdqr3ON7JhU0g17jjlg/jzQ7eTfx9vUNd3E=";
-    } // { shortRev = "0643266"; };
+    } // { shortRev = "a73afcf"; };
   };
 
   git = rec {
@@ -40,7 +40,6 @@ in
     inherit (source) src version;
     dontStrip = true;
     separateDebugInfo = true;
-    strictDeps = true;
     postPatch = ''
       patchShebangs --build test/
     '';
@@ -56,13 +55,7 @@ in
     doCheck = true;
     checkTarget = "test";
     hardeningDisable = [ "all" ];
-
     meta = {
-      homepage = "https://ovni.readthedocs.io";
-      description = "Obtuse but Versatile Nanoscale Instrumentation";
-      maintainers = with lib.maintainers.bsc; [ rarias ];
-      platforms = lib.platforms.linux;
-      license = lib.licenses.gpl3Plus;
       cross = true;
     };
   }

pkgs/papi/default.nix

@@ -1,22 +0,0 @@
-{
-  stdenv,
-  papi,
-}:
-
-if stdenv.hostPlatform == stdenv.buildPlatform then
-  papi
-else
-  papi.overrideAttrs (old: {
-    configureFlags = (old.configureFlags or [ ]) ++ [
-      "--enable-perf_event_uncore=no"
-      "--with-sysdetect=no"
-      "--with-ffsll"
-      "--with-tls=__thread"
-      "--with-virtualtimer=clock_thread_cputime_id"
-      "--with-walltimer=clock_realtime"
-      "--with-perf-events"
-      "--with-CPU=${stdenv.hostPlatform.uname.processor}"
-      "--with-arch=${stdenv.hostPlatform.uname.processor}"
-    ];
-    patches = (old.patches or [ ]) ++ [ ./fix-ar-cross.patch ];
-  })

pkgs/papi/fix-ar-cross.patch

@@ -1,19 +0,0 @@
-diff --git a/sde_lib/Makefile b/sde_lib/Makefile
-index 8518f92..90a9953 100644
---- a/sde_lib/Makefile
-+++ b/sde_lib/Makefile
-@@ -1,4 +1,5 @@
- CC ?= gcc
-+AR ?= ar
- SDE_INC = -I. -I..
- SDE_LD = -ldl -pthread
- CFLAGS += -Wextra -Wall -O2
-@@ -18,7 +19,7 @@ dynamic: $(DOBJS)
- 	rm -f *_d.o
- 
- static: $(SOBJS)
--	ar rs libsde.a $(SOBJS)
-+	$(AR) rs libsde.a $(SOBJS)
- 	rm -f *_s.o
- 
- clean:

pkgs/paraver/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , fetchFromGitHub
 , autoreconfHook
 , boost
@@ -12,7 +11,7 @@
 , paraverKernel
 , openssl
 , glibcLocales
-, wrapGAppsHook3
+, wrapGAppsHook
 }:
 
 let
@@ -47,7 +46,6 @@ stdenv.mkDerivation rec {
 
   dontStrip = true;
   enableParallelBuilding = true;
-  strictDeps = true;
 
   preConfigure = ''
     export CFLAGS="-O3"
@@ -65,7 +63,7 @@ stdenv.mkDerivation rec {
     autoconf
     automake
     autoreconfHook
-    wrapGAppsHook3
+    wrapGAppsHook
   ];
 
   buildInputs = [
@@ -90,18 +88,4 @@ stdenv.mkDerivation rec {
     mkdir -p $out/share/man
     mv $out/share/doc/wxparaver_help_contents/man $out/share/man/man1
   '';
-
-  meta = {
-    homepage = "https://tools.bsc.es/paraver";
-    downloadPage = "https://github.com/bsc-performance-tools/wxparaver";
-    description = "Performance analyzer based on event traces";
-    longDescription = ''
-      Trace-based visualization and analysis tool designed to study quantitative
-      detailed metrics and obtain qualitative knowledge of the performance of
-      applications, libraries, processors and whole architectures
-    '';
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.lgpl21Plus;
-  };
 }

pkgs/paraver/kernel.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , fetchFromGitHub
 , autoreconfHook
 , boost
@@ -34,7 +33,6 @@ stdenv.mkDerivation rec {
   enableParallelBuilding = true;
 
   dontStrip = true;
-  strictDeps = true;
 
   preConfigure = ''
     export CFLAGS="-O3 -DPARALLEL_ENABLED"
@@ -59,13 +57,4 @@ stdenv.mkDerivation rec {
     xml2
     zlib
   ];
-
-  meta = {
-    homepage = "https://tools.bsc.es/paraver";
-    downloadPage = "https://github.com/bsc-performance-tools/paraver-kernel";
-    description = "Kernel library used by wxparaver";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.lgpl21Plus;
-  };
 }

pkgs/pertalde/default.nix

@@ -1,47 +0,0 @@
-{
-  lib,
-  python3,
-  fetchPypi,
-  cargo,
-  rustPlatform,
-  rustc,
-}:
-
-let
-  pname = "pertalde";
-  version = "0.1.4";
-
-  src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-KdS5yNYR+8z81hMBTl9oNiLi17cVLyoZBNNR88T/gOY=";
-  };
-in
-python3.pkgs.buildPythonApplication {
-  inherit pname version src;
-  pyproject = true;
-  strictDeps = true;
-
-  cargoDeps = rustPlatform.fetchCargoVendor {
-    inherit src;
-    name = "${pname}-${version}";
-    hash = "sha256-dQ8EKlYZq+Urtb+0zxRi/Vh/ormIGCNKHy/9entyb7g=";
-  };
-
-  # error[E0554]: `#![feature]` may not be used on the stable release channel
-  env.RUSTC_BOOTSTRAP = true;
-
-  build-system = [
-    cargo
-    rustPlatform.cargoSetupHook
-    rustPlatform.maturinBuildHook
-    rustc
-  ];
-
-  meta = {
-    description = "Some command-line utilities on paraver traces";
-    homepage = "https://pypi.org/project/pertalde/";
-    license = lib.licenses.gpl3Only;
-    maintainers = with lib.maintainers.bsc; [ abonerib ];
-    mainProgram = "ptd";
-  };
-}

pkgs/pocl/0001-cmake-do-not-use-suffix.patch

@@ -1,26 +0,0 @@
-From ccf301659caac9b5e973ba1f2d32352acf617a98 Mon Sep 17 00:00:00 2001
-From: =?UTF-8?q?Aleix=20Bon=C3=A9?= <aleix.boneribo@bsc.es>
-Date: Tue, 2 Jul 2024 16:45:05 +0200
-Subject: [PATCH] cmake: do not use suffix
-
----
- cmake/LLVM.cmake                              |  3 ++
- 1 files changed, 3 insertions(+)
-
-diff --git a/cmake/LLVM.cmake b/cmake/LLVM.cmake
-index f4dbda065..e29144dce 100644
---- a/cmake/LLVM.cmake
-+++ b/cmake/LLVM.cmake
-@@ -65,6 +65,9 @@ else()
-     message(WARNING "Cannot determine llvm binary suffix from ${LLVM_CONFIG}")
-   endif()
-   message(STATUS "LLVM binaries suffix : ${LLVM_BINARY_SUFFIX}")
-+
-+  # We don't want suffixes in nix
-+  set(LLVM_BINARY_SUFFIX "")
- endif()
- 
- get_filename_component(LLVM_CONFIG_LOCATION "${LLVM_CONFIG}" DIRECTORY)
--- 
-2.45.1
-

pkgs/pocl/0001-cmake-native-build-tools.patch

@@ -1,33 +0,0 @@
-From f24b456c50f587b05cc8f2699c94d8cdefc5b13e Mon Sep 17 00:00:00 2001
-From: =?UTF-8?q?Aleix=20Bon=C3=A9?= <aleix.boneribo@bsc.es>
-Date: Tue, 2 Jul 2024 17:11:11 +0200
-Subject: [PATCH] cmake: native build tools
-
----
- cmake/LLVM.cmake                    |   7 +-
- 1 files changed, 6 insertions(+), 1 deletion(-)
-
-diff --git a/cmake/LLVM.cmake b/cmake/LLVM.cmake
-index e29144dce..b9f14ce6a 100644
---- a/cmake/LLVM.cmake
-+++ b/cmake/LLVM.cmake
-@@ -269,10 +269,15 @@ endforeach()
- 
- ####################################################################
- 
-+if(DEFINED LLVM_NATIVE_TOOL_DIR)
-+  set(TOOL_DIR "${LLVM_NATIVE_TOOL_DIR}")
-+  message(STATUS "TOOL_DIR=${TOOL_DIR}")
-+endif()
-+
- macro(find_program_or_die OUTPUT_VAR PROG_NAME DOCSTRING)
-   find_program(${OUTPUT_VAR}
-     NAMES "${PROG_NAME}${LLVM_BINARY_SUFFIX}${CMAKE_EXECUTABLE_SUFFIX}"
--    HINTS "${LLVM_BINDIR}" "${LLVM_CONFIG_LOCATION}"
-+    HINTS "${TOOL_DIR}" "${LLVM_BINDIR}" "${LLVM_CONFIG_LOCATION}"
-     DOC "${DOCSTRING}"
-     NO_CMAKE_PATH
-     NO_CMAKE_ENVIRONMENT_PATH
--- 
-2.45.1
-

pkgs/pocl/0001-cmake-use-clang-from-cmake-variable.patch

@@ -1,48 +0,0 @@
-From 4688b5ce895761c884ae15fc0234ed8d623b988b Mon Sep 17 00:00:00 2001
-From: =?UTF-8?q?Aleix=20Bon=C3=A9?= <aleix.boneribo@bsc.es>
-Date: Tue, 2 Jul 2024 15:41:47 +0200
-Subject: [PATCH] cmake: use clang from cmake variable
-
----
- cmake/LLVM.cmake | 22 ++++++++++++++++++++--
- 1 file changed, 20 insertions(+), 2 deletions(-)
-
-diff --git a/cmake/LLVM.cmake b/cmake/LLVM.cmake
-index 71b786dc7..f4dbda065 100644
---- a/cmake/LLVM.cmake
-+++ b/cmake/LLVM.cmake
-@@ -281,11 +281,29 @@ macro(find_program_or_die OUTPUT_VAR PROG_NAME DOCSTRING)
-   endif()
- endmacro()
- 
--find_program_or_die( CLANG "clang" "clang binary")
-+# -DCMAKE_C_COMPILER=riscv64-unknown-linux-gnu-clang -DCMAKE_CXX_COMPILER=riscv64-unknown-linux-gnu-clang++
-+
-+# if(DEFINED CLANG_EXECUTABLE)
-+if(DEFINED CMAKE_C_COMPILER)
-+  # set(CLANG "${CLANG_EXECUTABLE}")
-+  set(CLANG "${CMAKE_C_COMPILER}")
-+  message(STATUS "Using CLANG_EXECUTABLE: ${CLANG}")
-+else()
-+  find_program_or_die( CLANG "clang" "clang binary")
-+endif()
- execute_process(COMMAND "${CLANG}" "--version" OUTPUT_VARIABLE LLVM_CLANG_VERSION RESULT_VARIABLE CLANG_RES)
-+
- # TODO this should be optional
--find_program_or_die( CLANGXX "clang++" "clang++ binary")
-+# if(DEFINED CLANGXX_EXECUTABLE)
-+if(DEFINED CMAKE_CXX_COMPILER)
-+  # set(CLANGXX "${CLANGXX_EXECUTABLE}")
-+  set(CLANGXX "${CMAKE_CXX_COMPILER}")
-+  message(STATUS "Using CLANGXX_EXECUTABLE: ${CLANGXX}")
-+else()
-+  find_program_or_die( CLANGXX "clang++" "clang++ binary")
-+endif()
- execute_process(COMMAND "${CLANGXX}" "--version" OUTPUT_VARIABLE LLVM_CLANGXX_VERSION RESULT_VARIABLE CLANGXX_RES)
-+
- if(CLANGXX_RES OR CLANG_RES)
-   message(FATAL_ERROR "Failed running clang/clang++ --version")
- endif()
--- 
-2.45.1
-

pkgs/pocl/default.nix

@@ -1,255 +0,0 @@
-{
-  lib,
-  llvmPackages,
-  ninja,
-  cmake,
-  hwloc,
-  ocl-icd,
-  opencl-headers,
-  getconf,
-  pkg-config,
-  spirv-llvm-translator,
-  spirv-tools,
-  libxml2, # required for statically linked llvm
-  python3,
-  writableTmpDirAsHomeHook,
-  writeText,
-  runCommand,
-  opencl-cts,
-
-  fetchFromGitHub,
-
-  useGit ? false,
-  gitUrl ? "git@gitlab-internal.bsc.es:task-awareness/pocl/pocl.git",
-  gitBranch ? "new-device",
-  gitCommit ? "dd10c2221b31223cbb796182df6a07f11c7541f5",
-
-  staticLLVM ? true,
-  enableICD ? true,
-  enableSPIRV ? true,
-  enableHWLOC ? true,
-  enableRemoteServer ? false,
-  enableRemoteClient ? false,
-  enableDistroVariants ? false,
-
-  lttng-ust,
-  enableLTTNG ? false,
-
-  onetbb,
-  enableTBB ? false,
-
-  nosv ? null,
-  ovni ? null,
-  enableNOSV ? useGit,
-  enableOVNI ? useGit,
-
-  buildPackages,
-  targetPackages,
-  nix-update-script,
-}:
-
-assert (enableNOSV || enableOVNI) -> useGit;
-
-let
-
-  release = rec {
-    version = "7.1";
-    src = fetchFromGitHub {
-      owner = "pocl";
-      repo = "pocl";
-      tag = "v${version}";
-      hash = "sha256-bS6vTIjLO7YLs7qYLKW0cYYbEJ/hRS/+IjjAKbkj8ac=";
-    };
-  };
-
-  git = rec {
-    version = src.shortRev;
-    src = builtins.fetchGit {
-      url = gitUrl;
-      ref = gitBranch;
-      rev = gitCommit;
-    };
-  };
-
-  source = if (useGit) then git else release;
-
-  stdenv = llvmPackages.stdenv;
-
-  buildLlvmPackages = buildPackages.llvmPackages;
-
-  isCross = stdenv.hostPlatform != stdenv.buildPlatform;
-
-  featureList = lib.concatStringsSep "+" (
-    (lib.optionals enableICD [ "icd" ])
-    ++ (lib.optionals enableNOSV [ "nosv" ])
-    ++ (lib.optionals enableOVNI [ "ovni" ])
-    ++ (lib.optionals enableSPIRV [ "spirv" ])
-    ++ (lib.optionals enableTBB [ "tbb" ])
-    ++ (lib.optionals enableRemoteClient [ "server" ])
-    ++ (lib.optionals enableRemoteServer [ "client" ])
-  );
-in
-
-stdenv.mkDerivation (finalAttrs: {
-  pname = "pocl";
-  version = featureList + "-" + source.version;
-  inherit (source) src;
-
-  patches = lib.optionals useGit [
-    ./0001-cmake-use-clang-from-cmake-variable.patch
-    ./0001-cmake-do-not-use-suffix.patch
-    ./0001-cmake-native-build-tools.patch
-  ];
-
-  cmakeFlags = [
-    # TODO: all these are broken when cross compiling. Upstream has refactored
-    # all the cmake infra for cross compilation, but it's not in a release yet
-    (lib.cmakeOptionType "filepath" "WITH_LLVM_CONFIG" (
-      lib.getExe' buildLlvmPackages.llvm.dev "llvm-config"
-    ))
-    (lib.cmakeOptionType "filepath" "CLANG" (lib.getExe' buildLlvmPackages.clangUseLLVM "clang"))
-    (lib.cmakeOptionType "filepath" "CLANGXX" (lib.getExe' buildLlvmPackages.clangUseLLVM "clang++"))
-    (lib.cmakeOptionType "path" "CLANG_RESOURCE_DIR" "${llvmPackages.stdenv.cc}/resource-root")
-
-    (lib.cmakeBool "ENABLE_TESTS" finalAttrs.finalPackage.doCheck)
-
-    (lib.cmakeBool "ENABLE_RELOCATION" true)
-    (lib.cmakeBool "ENABLE_POCL_BUILDING" true)
-    (lib.cmakeBool "POCL_ICD_ABSOLUTE_PATH" true)
-
-    (lib.cmakeBool "ENABLE_TBB_DEVICE" enableTBB)
-    (lib.cmakeBool "ENABLE_ICD" enableICD)
-    (lib.cmakeBool "ENABLE_HWLOC" enableHWLOC)
-    (lib.cmakeBool "ENABLE_LTTNG" enableLTTNG)
-
-    (lib.cmakeBool "ENABLE_REMOTE_CLIENT" enableRemoteClient)
-    (lib.cmakeBool "ENABLE_REMOTE_SERVER" enableRemoteServer)
-
-    # avoid the runtime linker pulling in a different llvm e.g. from graphics drivers
-    (lib.cmakeBool "STATIC_LLVM" staticLLVM)
-  ]
-  ++ lib.optionals (enableNOSV || enableOVNI) [
-    (lib.cmakeBool "ENABLE_NOSV" enableNOSV)
-    (lib.cmakeBool "ENABLE_OVNI" enableOVNI)
-  ]
-  ++ lib.optionals (!isCross && enableDistroVariants) [
-    (lib.cmakeFeature "KERNELLIB_HOST_CPU_VARIANTS" "distro") # TODO: check if we can do it when cross compiling
-  ]
-  ++ lib.optionals isCross [
-    (lib.cmakeFeature "CMAKE_SYSTEM_NAME" "Linux")
-    (lib.cmakeFeature "CMAKE_FIND_ROOT_PATH_MODE_PROGRAM" "NEVER")
-    (lib.cmakeFeature "CMAKE_FIND_ROOT_PATH_MODE_LIBRARY" "ONLY")
-    (lib.cmakeFeature "CMAKE_FIND_ROOT_PATH_MODE_INCLUDE" "ONLY")
-    (lib.cmakeFeature "CMAKE_FIND_ROOT_PATH_MODE_PACKAGE" "ONLY")
-  ]
-  ++ lib.optionals stdenv.hostPlatform.isRiscV [
-    (lib.cmakeFeature "LLC_TRIPLE" "riscv64-unknown-linux-gnu")
-    (lib.cmakeFeature "LLC_HOST_CPU" "rv64g")
-    (lib.cmakeFeature "CLANG_MARCH_FLAG" "-march=")
-  ];
-
-  # Fixes error: ld: cannot find -lgcc / -lgcc_s when linking from libpocl on
-  # host
-  preConfigure = ''
-    cmakeFlagsArray+=(
-      -DEXTRA_HOST_LD_FLAGS="${lib.escapeShellArg (builtins.readFile "${targetPackages.stdenv.cc}/nix-support/cc-ldflags")}"
-      -DEXTRA_KERNEL_FLAGS="${lib.escapeShellArg (builtins.readFile "${targetPackages.stdenv.cc}/nix-support/cc-ldflags")}"
-    )
-  '';
-
-  nativeBuildInputs = [
-    cmake
-    getconf
-    ninja
-    pkg-config
-    python3
-  ];
-
-  buildInputs = [
-    opencl-headers
-    llvmPackages.libclang
-    llvmPackages.llvm
-  ]
-  ++ lib.optionals staticLLVM [ libxml2 ]
-  ++ lib.optionals enableNOSV [ nosv ]
-  ++ lib.optionals enableOVNI [ ovni ]
-  ++ lib.optionals enableHWLOC [ hwloc ]
-  ++ lib.optionals enableTBB [ onetbb ]
-  ++ lib.optionals enableICD [ ocl-icd ]
-  ++ lib.optionals enableLTTNG [ lttng-ust ]
-  ++ lib.optionals enableSPIRV [
-    (spirv-llvm-translator.override { inherit (llvmPackages) llvm; })
-    spirv-tools
-  ];
-
-  nativeInstallCheckInputs = [
-    writableTmpDirAsHomeHook # needed for POCL_CACHE_DIR
-  ];
-
-  doInstallCheck = true;
-
-  installCheckPhase = lib.optionalString enableICD ''
-    runHook preInstallCheck
-
-    export OCL_ICD_VENDORS=$out/etc/OpenCL/vendors
-    $out/bin/poclcc -o poclcc.cl.pocl $src/examples/poclcc/poclcc.cl
-
-    runHook postInstallCheck
-  '';
-
-  setupHook = lib.optionalDrvAttr enableICD (
-    writeText "setup-hook" ''
-      addToSearchPath OCL_ICD_VENDORS @out@/etc/OpenCL/vendors
-    ''
-  );
-
-  passthru =
-    let
-      self = finalAttrs.finalPackage;
-    in
-    {
-      updateScript = nix-update-script { };
-      git = self.override { useGit = true; };
-
-      withICD = enableICD;
-
-      test = {
-        # Run builtin tests (causes a rebuild)
-        self = self.overrideAttrs { doCheck = true; };
-
-        # Run basic test from Khronos OpenCL Conformance Test Suite
-        # WARN: despite its name, test_basic is very exhaustive, and can take more
-        # than 1 hour in a marenostrum5 node.
-        cts =
-          assert enableICD;
-          lib.genAttrs [ "api" "basic" "c11_atomics" "printf" "svm" ] (
-            name:
-            runCommand "pocl-cts-test_${name}" {
-              nativeBuildInputs = [ self ];
-              requiredSystemFeatures = [ "sys-devices" ];
-              env = {
-                POCL_DEBUG = "error,warn";
-                POCL_CACHE_DIR = "/build/pocl_cache";
-              };
-            } "${opencl-cts}/bin/Release/test_${name} | tee $out"
-          );
-      };
-    };
-
-  env.HWLOC_SYNTHETIC = lib.optionalDrvAttr enableHWLOC "node:1 core:1 pu:1";
-
-  propagatedBuildInputs = [ stdenv.cc.cc ];
-
-  meta = with lib; {
-    description = "A portable open source (MIT-licensed) implementation of the OpenCL standard";
-    homepage = "http://portablecl.org";
-    license = licenses.mit;
-    maintainers = with maintainers; [
-      leixb
-      jansol
-      xddxdd
-      bsc.maintainers.leixb
-    ];
-    platforms = platforms.linux ++ platforms.darwin;
-  };
-})

pkgs/rodinia/default.nix

@@ -1,58 +0,0 @@
-{
-  stdenv,
-  lib,
-  fetchurl,
-  ocl-icd,
-  opencl-headers,
-}:
-
-stdenv.mkDerivation {
-  pname = "rodinia-opencl";
-  version = "3.1";
-  src = fetchurl {
-    url = "http://www.cs.virginia.edu/~skadron/lava/Rodinia/Packages/rodinia_3.1.tar.bz2";
-    hash = "sha256-+uusfBHtj4/Pa/LX6FwwhvwtEfciBNbfwo3FsujyrP0=";
-  };
-
-  patches = [
-    ./rodinia-fixes.patch
-    ./rodinia-rm.patch
-  ];
-  buildInputs = [
-    opencl-headers
-    ocl-icd
-  ];
-  buildFlags = [
-    "OPENCL"
-    "--always-make"
-  ];
-
-  preBuild = ''
-    mkdir -p bin/linux/{cuda,omp,opencl}
-  '';
-
-  installPhase = ''
-    runHook preInstall
-
-    mkdir -p $out/share
-    cp -r bin data opencl $out
-    cp LICENSE README $out/share
-
-    runHook postInstall
-  '';
-
-  meta = {
-    homepage = "https://rodinia.cs.virginia.edu/";
-    description = "Test Suite of Compute-Intensive Applications with Accelerators";
-    maintainers = with lib.maintainers.bsc; [ abonerib ];
-    platforms = lib.platforms.linux;
-    license = {
-      deprecated = false;
-      free = false;
-      fullName = "Rodinia License";
-      redistributable = true;
-      shortName = "rodinia";
-      url = "https://www.cs.virginia.edu/~skadron/lava/rodinia/license.htm";
-    };
-  };
-}

pkgs/slurm-exporter/default.nix

@@ -13,7 +13,6 @@ buildGoModule rec {
 
   vendorHash = "sha256-A1dd9T9SIEHDCiVT2UwV6T02BSLh9ej6LC/2l54hgwI=";
   doCheck = false;
-  strictDeps = true;
 
   meta = with lib; {
     description = "Prometheus SLURM Exporter";

pkgs/sonar/default.nix

@@ -1,6 +1,5 @@
 {
   stdenv
-, lib
 , autoreconfHook
 , fetchFromGitHub
 , ovni
@@ -18,7 +17,6 @@ stdenv.mkDerivation rec {
   };
   hardeningDisable = [ "all" ];
   dontStrip = true;
-  strictDeps = true;
   configureFlags = [ "--with-ovni=${ovni}" ];
 
   nativeBuildInputs = [
@@ -29,13 +27,4 @@ stdenv.mkDerivation rec {
     ovni
     mpi
   ];
-
-  meta = {
-    homepage = "https://github.com/bsc-pm/sonar";
-    description = "Set of runtime libraries which instrument parallel programming models through the ovni instrumentation library";
-    maintainers = with lib.maintainers.bsc; [ rarias ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.mit;
-    cross = true;
-  };
 }

pkgs/systems.nix

@@ -0,0 +1,4 @@
+# See https://github.com/nix-systems/nix-systems
+[
+  "x86_64-linux"
+]