forked from rarias/jungle
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llvm-intel
...
remove-inp
| Author | SHA1 | Date | |
|---|---|---|---|
|
08c6af06ef
|
@@ -1,30 +0,0 @@
|
||||
# Maintainers
|
||||
|
||||
## Role of a maintainer
|
||||
The responsibilities of maintainers are quite lax, and similar in spirit to
|
||||
[nixpkgs' maintainers][1]:
|
||||
|
||||
The main responsibility of a maintainer is to keep the packages they
|
||||
maintain in a functioning state, and keep up with updates. In order to do
|
||||
that, they are empowered to make decisions over the packages they maintain.
|
||||
|
||||
That being said, the maintainer is not alone in proposing changes to the
|
||||
packages. Anybody (both bots and humans) can send PRs to bump or tweak the
|
||||
package.
|
||||
|
||||
In practice, this means that when updating or proposing changes to a package,
|
||||
we will notify maintainers by mentioning them in Gitea so they can test changes
|
||||
and give feedback.
|
||||
|
||||
Since we do bi-yearly release cycles, there is no expectation from maintainers
|
||||
to update packages at each upstream release. Nevertheless, on each release cycle
|
||||
we may request help from maintainers when updating or testing their packages.
|
||||
|
||||
## Becoming a maintainer
|
||||
|
||||
|
||||
You'll have to add yourself in the `maintainers.nix` list; your username should
|
||||
match your `bsc.es` email. Then you can add yourself to the `meta.maintainers`
|
||||
of any package you are interested in maintaining.
|
||||
|
||||
[1]: [https://github.com/NixOS/nixpkgs/tree/nixos-25.05/maintainers]
|
||||
49
flake.lock
generated
49
flake.lock
generated
@@ -1,25 +1,64 @@
|
||||
{
|
||||
"nodes": {
|
||||
"agenix": {
|
||||
"inputs": {
|
||||
"darwin": [],
|
||||
"home-manager": [],
|
||||
"nixpkgs": [
|
||||
"nixpkgs"
|
||||
],
|
||||
"systems": [
|
||||
"systems"
|
||||
]
|
||||
},
|
||||
"locked": {
|
||||
"lastModified": 1750173260,
|
||||
"narHash": "sha256-9P1FziAwl5+3edkfFcr5HeGtQUtrSdk/MksX39GieoA=",
|
||||
"owner": "ryantm",
|
||||
"repo": "agenix",
|
||||
"rev": "531beac616433bac6f9e2a19feb8e99a22a66baf",
|
||||
"type": "github"
|
||||
},
|
||||
"original": {
|
||||
"owner": "ryantm",
|
||||
"repo": "agenix",
|
||||
"type": "github"
|
||||
}
|
||||
},
|
||||
"nixpkgs": {
|
||||
"locked": {
|
||||
"lastModified": 1767634882,
|
||||
"narHash": "sha256-2GffSfQxe3sedHzK+sTKlYo/NTIAGzbFCIsNMUPAAnk=",
|
||||
"lastModified": 1752436162,
|
||||
"narHash": "sha256-Kt1UIPi7kZqkSc5HVj6UY5YLHHEzPBkgpNUByuyxtlw=",
|
||||
"owner": "NixOS",
|
||||
"repo": "nixpkgs",
|
||||
"rev": "3c9db02515ef1d9b6b709fc60ba9a540957f661c",
|
||||
"rev": "dfcd5b901dbab46c9c6e80b265648481aafb01f8",
|
||||
"type": "github"
|
||||
},
|
||||
"original": {
|
||||
"owner": "NixOS",
|
||||
"ref": "nixos-25.11",
|
||||
"ref": "nixos-25.05",
|
||||
"repo": "nixpkgs",
|
||||
"type": "github"
|
||||
}
|
||||
},
|
||||
"root": {
|
||||
"inputs": {
|
||||
"nixpkgs": "nixpkgs"
|
||||
"agenix": "agenix",
|
||||
"nixpkgs": "nixpkgs",
|
||||
"systems": "systems"
|
||||
}
|
||||
},
|
||||
"systems": {
|
||||
"flake": false,
|
||||
"locked": {
|
||||
"path": "./pkgs/systems.nix",
|
||||
"type": "path"
|
||||
},
|
||||
"original": {
|
||||
"path": "./pkgs/systems.nix",
|
||||
"type": "path"
|
||||
},
|
||||
"parent": []
|
||||
}
|
||||
},
|
||||
"root": "root",
|
||||
|
||||
21
flake.nix
21
flake.nix
@@ -1,13 +1,22 @@
|
||||
{
|
||||
inputs = {
|
||||
nixpkgs.url = "github:NixOS/nixpkgs/nixos-25.11";
|
||||
nixpkgs.url = "github:NixOS/nixpkgs/nixos-25.05";
|
||||
|
||||
systems.url = "path:./pkgs/systems.nix";
|
||||
systems.flake = false;
|
||||
|
||||
agenix.url = "github:ryantm/agenix";
|
||||
agenix.inputs.nixpkgs.follows = "nixpkgs";
|
||||
agenix.inputs.systems.follows = "systems";
|
||||
agenix.inputs.darwin.follows = "";
|
||||
agenix.inputs.home-manager.follows = "";
|
||||
};
|
||||
|
||||
outputs = { self, nixpkgs, ... }:
|
||||
outputs = { self, nixpkgs, agenix, ... }:
|
||||
let
|
||||
mkConf = name: nixpkgs.lib.nixosSystem {
|
||||
system = "x86_64-linux";
|
||||
specialArgs = { inherit nixpkgs; theFlake = self; };
|
||||
specialArgs = { inherit nixpkgs agenix; theFlake = self; };
|
||||
modules = [ "${self.outPath}/m/${name}/configuration.nix" ];
|
||||
};
|
||||
# For now we only support x86
|
||||
@@ -43,10 +52,6 @@ in
|
||||
hydraJobs = self.legacyPackages.${system}.bsc.hydraJobs;
|
||||
|
||||
# propagate nixpkgs lib, so we can do bscpkgs.lib
|
||||
lib = nixpkgs.lib // {
|
||||
maintainers = nixpkgs.lib.maintainers // {
|
||||
bsc = import ./pkgs/maintainers.nix;
|
||||
};
|
||||
};
|
||||
inherit (nixpkgs) lib;
|
||||
};
|
||||
}
|
||||
|
||||
3
keys.nix
3
keys.nix
@@ -22,9 +22,8 @@ rec {
|
||||
storage = [ bay lake2 ];
|
||||
monitor = [ hut ];
|
||||
login = [ apex ];
|
||||
services = [ tent ];
|
||||
|
||||
system = storage ++ monitor ++ login ++ services;
|
||||
system = storage ++ monitor ++ login;
|
||||
safe = system ++ compute;
|
||||
all = safe ++ playground;
|
||||
};
|
||||
|
||||
@@ -57,18 +57,6 @@
|
||||
};
|
||||
};
|
||||
|
||||
services.fail2ban = {
|
||||
enable = true;
|
||||
maxretry = 5;
|
||||
bantime-increment = {
|
||||
enable = true; # Double ban time on each attack
|
||||
maxtime = "7d"; # Ban up to a week
|
||||
};
|
||||
};
|
||||
|
||||
# Disable SSH login with password, allow only keypair
|
||||
services.openssh.settings.PasswordAuthentication = false;
|
||||
|
||||
networking.firewall = {
|
||||
extraCommands = ''
|
||||
# Blackhole BSC vulnerability scanner (OpenVAS) as it is spamming our
|
||||
|
||||
@@ -7,7 +7,7 @@
|
||||
mountdPort = 4002;
|
||||
statdPort = 4000;
|
||||
exports = ''
|
||||
/home 10.0.40.0/21(rw,async,no_subtree_check,no_root_squash)
|
||||
/home 10.0.40.0/24(rw,async,no_subtree_check,no_root_squash)
|
||||
/home 10.106.0.0/24(rw,async,no_subtree_check,no_root_squash)
|
||||
'';
|
||||
};
|
||||
@@ -15,19 +15,19 @@
|
||||
# Check with `rpcinfo -p`
|
||||
extraCommands = ''
|
||||
# Accept NFS traffic from compute nodes but not from the outside
|
||||
iptables -A nixos-fw -p tcp -s 10.0.40.0/21 --dport 111 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p tcp -s 10.0.40.0/21 --dport 2049 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p tcp -s 10.0.40.0/21 --dport 4000 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p tcp -s 10.0.40.0/21 --dport 4001 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p tcp -s 10.0.40.0/21 --dport 4002 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p tcp -s 10.0.40.0/21 --dport 20048 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 --dport 111 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 --dport 2049 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 --dport 4000 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 --dport 4001 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 --dport 4002 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 --dport 20048 -j nixos-fw-accept
|
||||
# Same but UDP
|
||||
iptables -A nixos-fw -p udp -s 10.0.40.0/21 --dport 111 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p udp -s 10.0.40.0/21 --dport 2049 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p udp -s 10.0.40.0/21 --dport 4000 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p udp -s 10.0.40.0/21 --dport 4001 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p udp -s 10.0.40.0/21 --dport 4002 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p udp -s 10.0.40.0/21 --dport 20048 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p udp -s 10.0.40.0/24 --dport 111 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p udp -s 10.0.40.0/24 --dport 2049 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p udp -s 10.0.40.0/24 --dport 4000 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p udp -s 10.0.40.0/24 --dport 4001 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p udp -s 10.0.40.0/24 --dport 4002 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p udp -s 10.0.40.0/24 --dport 20048 -j nixos-fw-accept
|
||||
|
||||
# Accept NFS traffic from wg0
|
||||
iptables -A nixos-fw -p tcp -i wg0 -s 10.106.0.0/24 --dport 111 -j nixos-fw-accept
|
||||
|
||||
@@ -24,7 +24,7 @@
|
||||
address = "10.0.40.40";
|
||||
prefixLength = 24;
|
||||
} ];
|
||||
interfaces.ibs785.ipv4.addresses = [ {
|
||||
interfaces.ibp5s0.ipv4.addresses = [ {
|
||||
address = "10.0.42.40";
|
||||
prefixLength = 24;
|
||||
} ];
|
||||
@@ -35,7 +35,7 @@
|
||||
# Accept monitoring requests from hut
|
||||
iptables -A nixos-fw -p tcp -s hut -m multiport --dport 9283,9002 -j nixos-fw-accept
|
||||
# Accept all Ceph traffic from the local network
|
||||
iptables -A nixos-fw -p tcp -s 10.0.40.0/21 -m multiport --dport 3300,6789,6800:7568 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 -m multiport --dport 3300,6789,6800:7568 -j nixos-fw-accept
|
||||
'';
|
||||
};
|
||||
};
|
||||
|
||||
@@ -1,8 +1,9 @@
|
||||
{ pkgs, ... }:
|
||||
{ agenix, ... }:
|
||||
|
||||
{
|
||||
imports = [ ../../module/agenix.nix ];
|
||||
imports = [ agenix.nixosModules.default ];
|
||||
|
||||
# Add agenix to system packages
|
||||
environment.systemPackages = [ pkgs.agenix ];
|
||||
environment.systemPackages = [
|
||||
agenix.packages.x86_64-linux.default
|
||||
];
|
||||
}
|
||||
|
||||
@@ -1,36 +1,11 @@
|
||||
{ pkgs, ... }:
|
||||
{ pkgs, config, ... }:
|
||||
|
||||
{
|
||||
environment.systemPackages = with pkgs; [
|
||||
cmake
|
||||
ethtool
|
||||
file
|
||||
freeipmi
|
||||
git
|
||||
gnumake
|
||||
home-manager
|
||||
htop
|
||||
ipmitool
|
||||
ldns
|
||||
lm_sensors
|
||||
ncdu
|
||||
nix-diff
|
||||
nix-index
|
||||
nix-output-monitor
|
||||
nixfmt-tree
|
||||
nixos-option
|
||||
pciutils
|
||||
perf
|
||||
pv
|
||||
ripgrep
|
||||
tcpdump
|
||||
tmux
|
||||
tree
|
||||
vim
|
||||
wget
|
||||
|
||||
# From jungle overlay
|
||||
nixgen
|
||||
vim wget git htop tmux pciutils tcpdump ripgrep nix-index nixos-option
|
||||
nix-diff ipmitool freeipmi ethtool lm_sensors cmake gnumake file tree
|
||||
ncdu config.boot.kernelPackages.perf ldns pv
|
||||
# From bsckgs overlay
|
||||
osumb
|
||||
];
|
||||
|
||||
|
||||
@@ -139,7 +139,6 @@
|
||||
openssh.authorizedKeys.keys = [
|
||||
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIKGt0ESYxekBiHJQowmKpfdouw0hVm3N7tUMtAaeLejK vincent@varch"
|
||||
];
|
||||
shell = pkgs.zsh;
|
||||
};
|
||||
|
||||
pmartin1 = {
|
||||
@@ -181,45 +180,6 @@
|
||||
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIFmMqKqPg4uocNOr3O41kLbZMOMJn3m2ZdN1JvTR96z3 bsccns@arnau-bsc"
|
||||
];
|
||||
};
|
||||
|
||||
aaguirre = {
|
||||
uid = 9655;
|
||||
isNormalUser = true;
|
||||
home = "/home/Computational/aaguirre";
|
||||
description = "Alejandro Aguirre";
|
||||
group = "Computational";
|
||||
hosts = [ "apex" "hut" ];
|
||||
hashedPassword = "$6$TXRXQT6jjBvxkxU6$E.sh5KspAm1qeG5Ct7OPHpo8REmbGDwjFGvqeGgTVz3GASGOAnPL7UMZsMAsAKBoahOw.v8LNno6XGrTEPzZH1";
|
||||
openssh.authorizedKeys.keys = [
|
||||
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIOlRX7ZCnqtUJYCxKgWmgSrFCYuA2LHY96rVwqxXPl86 aaguirre@BSC-8488184117"
|
||||
];
|
||||
};
|
||||
|
||||
emonteir = {
|
||||
uid = 9656;
|
||||
isNormalUser = true;
|
||||
home = "/home/Computational/emonteir";
|
||||
description = "Erwin Royson Monteiro";
|
||||
group = "Computational";
|
||||
hosts = [ "apex" "fox" ];
|
||||
hashedPassword = "$6$0mU88zd3ZuK5NiJQ$DFWL5RMLH6esQM5UyhBCiiNryw4lDDmvJp7Usz3tmevnsiSJr6u0RsUKAnR/K8GRBFrV1.GocrgNjKjik5GY//";
|
||||
openssh.authorizedKeys.keys = [
|
||||
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIOKZKot/Y3F5Wq9pQIXlCbyvQuVVeWMCsAC96Nd+LTcG erwin@Oreo"
|
||||
];
|
||||
};
|
||||
|
||||
ssanzmar = {
|
||||
uid = 9657;
|
||||
isNormalUser = true;
|
||||
home = "/home/Computational/ssanzmar";
|
||||
description = "Sergio Sanz Martínez";
|
||||
group = "Computational";
|
||||
hosts = [ "apex" "fox" ];
|
||||
hashedPassword = "$6$HUjNDJeJMmNQ6M64$laXSOZcXg6o4v2r8Jm8Xj9kmqw7veCY32po3TVDPRR4WlyxvOeqwoKr4NjlUlPPpKN55Oot3ZYHi.9iNXsH5E1";
|
||||
openssh.authorizedKeys.keys = [
|
||||
"ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIIELrsRRHXryrdA2ZBx5XmdGxL4DC5bmJydhBeTWQ0SQ sergio.sanz.martinez@estudiantat.upc.edu"
|
||||
];
|
||||
};
|
||||
};
|
||||
|
||||
groups = {
|
||||
|
||||
@@ -5,5 +5,5 @@
|
||||
boot.kernelModules = [ "ipmi_watchdog" ];
|
||||
|
||||
# Enable systemd watchdog with 30 s interval
|
||||
systemd.settings.Manager.RuntimeWatchdogSec = 30;
|
||||
systemd.watchdog.runtimeTime = "30s";
|
||||
}
|
||||
|
||||
@@ -1,6 +1,11 @@
|
||||
{ pkgs, lib, ... }:
|
||||
{ config, pkgs, lib, ... }:
|
||||
|
||||
{
|
||||
# add the perf tool
|
||||
environment.systemPackages = with pkgs; [
|
||||
config.boot.kernelPackages.perf
|
||||
];
|
||||
|
||||
# allow non-root users to read tracing data from the kernel
|
||||
boot.kernel.sysctl."kernel.perf_event_paranoid" = -2;
|
||||
boot.kernel.sysctl."kernel.kptr_restrict" = 0;
|
||||
|
||||
@@ -93,4 +93,20 @@
|
||||
wantedBy = [ "multi-user.target" ];
|
||||
serviceConfig.ExecStart = script;
|
||||
};
|
||||
|
||||
# Only allow SSH connections from users who have a SLURM allocation
|
||||
# See: https://slurm.schedmd.com/pam_slurm_adopt.html
|
||||
security.pam.services.sshd.rules.account.slurm = {
|
||||
control = "required";
|
||||
enable = true;
|
||||
modulePath = "${pkgs.slurm}/lib/security/pam_slurm_adopt.so";
|
||||
args = [ "log_level=debug5" ];
|
||||
order = 999999; # Make it last one
|
||||
};
|
||||
|
||||
# Disable systemd session (pam_systemd.so) as it will conflict with the
|
||||
# pam_slurm_adopt.so module. What happens is that the shell is first adopted
|
||||
# into the slurmstepd task and then into the systemd session, which is not
|
||||
# what we want, otherwise it will linger even if all jobs are gone.
|
||||
security.pam.services.sshd.startSession = lib.mkForce false;
|
||||
}
|
||||
|
||||
@@ -17,7 +17,6 @@
|
||||
./postgresql.nix
|
||||
./nginx.nix
|
||||
./p.nix
|
||||
./ompss2-timer.nix
|
||||
#./pxe.nix
|
||||
];
|
||||
|
||||
@@ -45,7 +44,7 @@
|
||||
address = "10.0.40.7";
|
||||
prefixLength = 24;
|
||||
} ];
|
||||
interfaces.ibs785.ipv4.addresses = [ {
|
||||
interfaces.ibp5s0.ipv4.addresses = [ {
|
||||
address = "10.0.42.7";
|
||||
prefixLength = 24;
|
||||
} ];
|
||||
|
||||
@@ -29,9 +29,6 @@
|
||||
};
|
||||
};
|
||||
|
||||
# Allow gitea user to send mail
|
||||
users.users.gitea.extraGroups = [ "mail-robot" ];
|
||||
|
||||
services.gitea-actions-runner.instances = {
|
||||
runrun = {
|
||||
enable = true;
|
||||
|
||||
@@ -1,11 +1,8 @@
|
||||
{ config, lib, ... }:
|
||||
{
|
||||
# Robot user that can see the password to send mail from jungle-robot
|
||||
users.groups.mail-robot = {};
|
||||
|
||||
age.secrets.jungleRobotPassword = {
|
||||
file = ../../secrets/jungle-robot-password.age;
|
||||
group = "mail-robot";
|
||||
group = "gitea";
|
||||
mode = "440";
|
||||
};
|
||||
|
||||
|
||||
@@ -4,8 +4,8 @@ let
|
||||
name = "jungle-web";
|
||||
src = pkgs.fetchgit {
|
||||
url = "https://jungle.bsc.es/git/rarias/jungle-website.git";
|
||||
rev = "5f18335d14126d2fef134c0cd441771436f7dfa1";
|
||||
hash = "sha256-s9VBF91sQ7hg9+lrwNFPYgoXTTyXaQcAulCiGJgWERo=";
|
||||
rev = "739bf0175a7f05380fe7ad7023ff1d60db1710e1";
|
||||
hash = "sha256-ea5DzhYTzZ9TmqD+x95rdNdLbxPnBluqlYH2NmBYmc4=";
|
||||
};
|
||||
buildInputs = [ pkgs.hugo ];
|
||||
buildPhase = ''
|
||||
|
||||
@@ -1,85 +0,0 @@
|
||||
{ config, pkgs, ... }:
|
||||
{
|
||||
systemd.timers = {
|
||||
"ompss2-closing" = {
|
||||
wantedBy = [ "timers.target" ];
|
||||
timerConfig = {
|
||||
Unit = "ompss2-closing.service";
|
||||
OnCalendar = [ "*-03-15 07:00:00" "*-09-15 07:00:00"];
|
||||
};
|
||||
};
|
||||
"ompss2-freeze" = {
|
||||
wantedBy = [ "timers.target" ];
|
||||
timerConfig = {
|
||||
Unit = "ompss2-freeze.service";
|
||||
OnCalendar = [ "*-04-15 07:00:00" "*-10-15 07:00:00" ];
|
||||
};
|
||||
};
|
||||
"ompss2-release" = {
|
||||
wantedBy = [ "timers.target" ];
|
||||
timerConfig = {
|
||||
Unit = "ompss2-release.service";
|
||||
OnCalendar = [ "*-05-15 07:00:00" "*-11-15 07:00:00" ];
|
||||
};
|
||||
};
|
||||
};
|
||||
|
||||
systemd.services =
|
||||
let
|
||||
closing = pkgs.writeText "closing.txt"
|
||||
''
|
||||
Subject: OmpSs-2 release enters closing period
|
||||
|
||||
Hi,
|
||||
|
||||
You have one month to merge the remaining features for the next OmpSs-2
|
||||
release. Please, identify what needs to be merged and discuss it in the next
|
||||
OmpSs-2 meeting.
|
||||
|
||||
Thanks!,
|
||||
Jungle robot
|
||||
'';
|
||||
freeze = pkgs.writeText "freeze.txt"
|
||||
''
|
||||
Subject: OmpSs-2 release enters freeze period
|
||||
|
||||
Hi,
|
||||
|
||||
The period to introduce new features or breaking changes is over, only bug
|
||||
fixes are allowed now. During this time, please prepare the release notes
|
||||
to be included in the next OmpSs-2 release.
|
||||
|
||||
Thanks!,
|
||||
Jungle robot
|
||||
'';
|
||||
release = pkgs.writeText "release.txt"
|
||||
''
|
||||
Subject: OmpSs-2 release now
|
||||
|
||||
Hi,
|
||||
|
||||
The period to introduce bug fixes is now over. Please, proceed to do the
|
||||
OmpSs-2 release.
|
||||
|
||||
Thanks!,
|
||||
Jungle robot
|
||||
'';
|
||||
mkServ = name: mail: {
|
||||
"ompss2-${name}" = {
|
||||
script = ''
|
||||
set -eu
|
||||
set -o pipefail
|
||||
cat ${mail} | ${config.security.wrapperDir}/sendmail star@bsc.es
|
||||
'';
|
||||
serviceConfig = {
|
||||
Type = "oneshot";
|
||||
DynamicUser = true;
|
||||
Group = "mail-robot";
|
||||
};
|
||||
};
|
||||
};
|
||||
in
|
||||
(mkServ "closing" closing) //
|
||||
(mkServ "freeze" freeze) //
|
||||
(mkServ "release" release);
|
||||
}
|
||||
@@ -46,7 +46,7 @@
|
||||
address = "10.0.40.42";
|
||||
prefixLength = 24;
|
||||
} ];
|
||||
interfaces.ibs785.ipv4.addresses = [ {
|
||||
interfaces.ibp5s0.ipv4.addresses = [ {
|
||||
address = "10.0.42.42";
|
||||
prefixLength = 24;
|
||||
} ];
|
||||
@@ -57,7 +57,7 @@
|
||||
# Accept monitoring requests from hut
|
||||
iptables -A nixos-fw -p tcp -s hut --dport 9002 -j nixos-fw-accept
|
||||
# Accept all Ceph traffic from the local network
|
||||
iptables -A nixos-fw -p tcp -s 10.0.40.0/21 -m multiport --dport 3300,6789,6800:7568 -j nixos-fw-accept
|
||||
iptables -A nixos-fw -p tcp -s 10.0.40.0/24 -m multiport --dport 3300,6789,6800:7568 -j nixos-fw-accept
|
||||
'';
|
||||
};
|
||||
};
|
||||
|
||||
@@ -1,357 +0,0 @@
|
||||
{
|
||||
config,
|
||||
options,
|
||||
lib,
|
||||
pkgs,
|
||||
...
|
||||
}:
|
||||
with lib;
|
||||
let
|
||||
cfg = config.age;
|
||||
|
||||
isDarwin = lib.attrsets.hasAttrByPath [ "environment" "darwinConfig" ] options;
|
||||
|
||||
ageBin = config.age.ageBin;
|
||||
|
||||
users = config.users.users;
|
||||
|
||||
sysusersEnabled =
|
||||
if isDarwin then
|
||||
false
|
||||
else
|
||||
options.systemd ? sysusers && (config.systemd.sysusers.enable || config.services.userborn.enable);
|
||||
|
||||
mountCommand =
|
||||
if isDarwin then
|
||||
''
|
||||
if ! diskutil info "${cfg.secretsMountPoint}" &> /dev/null; then
|
||||
num_sectors=1048576
|
||||
dev=$(hdiutil attach -nomount ram://"$num_sectors" | sed 's/[[:space:]]*$//')
|
||||
newfs_hfs -v agenix "$dev"
|
||||
mount -t hfs -o nobrowse,nodev,nosuid,-m=0751 "$dev" "${cfg.secretsMountPoint}"
|
||||
fi
|
||||
''
|
||||
else
|
||||
''
|
||||
grep -q "${cfg.secretsMountPoint} ramfs" /proc/mounts ||
|
||||
mount -t ramfs none "${cfg.secretsMountPoint}" -o nodev,nosuid,mode=0751
|
||||
'';
|
||||
newGeneration = ''
|
||||
_agenix_generation="$(basename "$(readlink ${cfg.secretsDir})" || echo 0)"
|
||||
(( ++_agenix_generation ))
|
||||
echo "[agenix] creating new generation in ${cfg.secretsMountPoint}/$_agenix_generation"
|
||||
mkdir -p "${cfg.secretsMountPoint}"
|
||||
chmod 0751 "${cfg.secretsMountPoint}"
|
||||
${mountCommand}
|
||||
mkdir -p "${cfg.secretsMountPoint}/$_agenix_generation"
|
||||
chmod 0751 "${cfg.secretsMountPoint}/$_agenix_generation"
|
||||
'';
|
||||
|
||||
chownGroup = if isDarwin then "admin" else "keys";
|
||||
# chown the secrets mountpoint and the current generation to the keys group
|
||||
# instead of leaving it root:root.
|
||||
chownMountPoint = ''
|
||||
chown :${chownGroup} "${cfg.secretsMountPoint}" "${cfg.secretsMountPoint}/$_agenix_generation"
|
||||
'';
|
||||
|
||||
setTruePath = secretType: ''
|
||||
${
|
||||
if secretType.symlink then
|
||||
''
|
||||
_truePath="${cfg.secretsMountPoint}/$_agenix_generation/${secretType.name}"
|
||||
''
|
||||
else
|
||||
''
|
||||
_truePath="${secretType.path}"
|
||||
''
|
||||
}
|
||||
'';
|
||||
|
||||
installSecret = secretType: ''
|
||||
${setTruePath secretType}
|
||||
echo "decrypting '${secretType.file}' to '$_truePath'..."
|
||||
TMP_FILE="$_truePath.tmp"
|
||||
|
||||
IDENTITIES=()
|
||||
for identity in ${toString cfg.identityPaths}; do
|
||||
test -r "$identity" || continue
|
||||
test -s "$identity" || continue
|
||||
IDENTITIES+=(-i)
|
||||
IDENTITIES+=("$identity")
|
||||
done
|
||||
|
||||
test "''${#IDENTITIES[@]}" -eq 0 && echo "[agenix] WARNING: no readable identities found!"
|
||||
|
||||
mkdir -p "$(dirname "$_truePath")"
|
||||
[ "${secretType.path}" != "${cfg.secretsDir}/${secretType.name}" ] && mkdir -p "$(dirname "${secretType.path}")"
|
||||
(
|
||||
umask u=r,g=,o=
|
||||
test -f "${secretType.file}" || echo '[agenix] WARNING: encrypted file ${secretType.file} does not exist!'
|
||||
test -d "$(dirname "$TMP_FILE")" || echo "[agenix] WARNING: $(dirname "$TMP_FILE") does not exist!"
|
||||
LANG=${
|
||||
config.i18n.defaultLocale or "C"
|
||||
} ${ageBin} --decrypt "''${IDENTITIES[@]}" -o "$TMP_FILE" "${secretType.file}"
|
||||
)
|
||||
chmod ${secretType.mode} "$TMP_FILE"
|
||||
mv -f "$TMP_FILE" "$_truePath"
|
||||
|
||||
${optionalString secretType.symlink ''
|
||||
[ "${secretType.path}" != "${cfg.secretsDir}/${secretType.name}" ] && ln -sfT "${cfg.secretsDir}/${secretType.name}" "${secretType.path}"
|
||||
''}
|
||||
'';
|
||||
|
||||
testIdentities = map (path: ''
|
||||
test -f ${path} || echo '[agenix] WARNING: config.age.identityPaths entry ${path} not present!'
|
||||
'') cfg.identityPaths;
|
||||
|
||||
cleanupAndLink = ''
|
||||
_agenix_generation="$(basename "$(readlink ${cfg.secretsDir})" || echo 0)"
|
||||
(( ++_agenix_generation ))
|
||||
echo "[agenix] symlinking new secrets to ${cfg.secretsDir} (generation $_agenix_generation)..."
|
||||
ln -sfT "${cfg.secretsMountPoint}/$_agenix_generation" ${cfg.secretsDir}
|
||||
|
||||
(( _agenix_generation > 1 )) && {
|
||||
echo "[agenix] removing old secrets (generation $(( _agenix_generation - 1 )))..."
|
||||
rm -rf "${cfg.secretsMountPoint}/$(( _agenix_generation - 1 ))"
|
||||
}
|
||||
'';
|
||||
|
||||
installSecrets = builtins.concatStringsSep "\n" (
|
||||
[ "echo '[agenix] decrypting secrets...'" ]
|
||||
++ testIdentities
|
||||
++ (map installSecret (builtins.attrValues cfg.secrets))
|
||||
++ [ cleanupAndLink ]
|
||||
);
|
||||
|
||||
chownSecret = secretType: ''
|
||||
${setTruePath secretType}
|
||||
chown ${secretType.owner}:${secretType.group} "$_truePath"
|
||||
'';
|
||||
|
||||
chownSecrets = builtins.concatStringsSep "\n" (
|
||||
[ "echo '[agenix] chowning...'" ]
|
||||
++ [ chownMountPoint ]
|
||||
++ (map chownSecret (builtins.attrValues cfg.secrets))
|
||||
);
|
||||
|
||||
secretType = types.submodule (
|
||||
{ config, ... }:
|
||||
{
|
||||
options = {
|
||||
name = mkOption {
|
||||
type = types.str;
|
||||
default = config._module.args.name;
|
||||
defaultText = literalExpression "config._module.args.name";
|
||||
description = ''
|
||||
Name of the file used in {option}`age.secretsDir`
|
||||
'';
|
||||
};
|
||||
file = mkOption {
|
||||
type = types.path;
|
||||
description = ''
|
||||
Age file the secret is loaded from.
|
||||
'';
|
||||
};
|
||||
path = mkOption {
|
||||
type = types.str;
|
||||
default = "${cfg.secretsDir}/${config.name}";
|
||||
defaultText = literalExpression ''
|
||||
"''${cfg.secretsDir}/''${config.name}"
|
||||
'';
|
||||
description = ''
|
||||
Path where the decrypted secret is installed.
|
||||
'';
|
||||
};
|
||||
mode = mkOption {
|
||||
type = types.str;
|
||||
default = "0400";
|
||||
description = ''
|
||||
Permissions mode of the decrypted secret in a format understood by chmod.
|
||||
'';
|
||||
};
|
||||
owner = mkOption {
|
||||
type = types.str;
|
||||
default = "0";
|
||||
description = ''
|
||||
User of the decrypted secret.
|
||||
'';
|
||||
};
|
||||
group = mkOption {
|
||||
type = types.str;
|
||||
default = users.${config.owner}.group or "0";
|
||||
defaultText = literalExpression ''
|
||||
users.''${config.owner}.group or "0"
|
||||
'';
|
||||
description = ''
|
||||
Group of the decrypted secret.
|
||||
'';
|
||||
};
|
||||
symlink = mkEnableOption "symlinking secrets to their destination" // {
|
||||
default = true;
|
||||
};
|
||||
};
|
||||
}
|
||||
);
|
||||
in
|
||||
{
|
||||
imports = [
|
||||
(mkRenamedOptionModule [ "age" "sshKeyPaths" ] [ "age" "identityPaths" ])
|
||||
];
|
||||
|
||||
options.age = {
|
||||
ageBin = mkOption {
|
||||
type = types.str;
|
||||
default = "${pkgs.age}/bin/age";
|
||||
defaultText = literalExpression ''
|
||||
"''${pkgs.age}/bin/age"
|
||||
'';
|
||||
description = ''
|
||||
The age executable to use.
|
||||
'';
|
||||
};
|
||||
secrets = mkOption {
|
||||
type = types.attrsOf secretType;
|
||||
default = { };
|
||||
description = ''
|
||||
Attrset of secrets.
|
||||
'';
|
||||
};
|
||||
secretsDir = mkOption {
|
||||
type = types.path;
|
||||
default = "/run/agenix";
|
||||
description = ''
|
||||
Folder where secrets are symlinked to
|
||||
'';
|
||||
};
|
||||
secretsMountPoint = mkOption {
|
||||
type =
|
||||
types.addCheck types.str (
|
||||
s:
|
||||
(builtins.match "[ \t\n]*" s) == null # non-empty
|
||||
&& (builtins.match ".+/" s) == null
|
||||
) # without trailing slash
|
||||
// {
|
||||
description = "${types.str.description} (with check: non-empty without trailing slash)";
|
||||
};
|
||||
default = "/run/agenix.d";
|
||||
description = ''
|
||||
Where secrets are created before they are symlinked to {option}`age.secretsDir`
|
||||
'';
|
||||
};
|
||||
identityPaths = mkOption {
|
||||
type = types.listOf types.path;
|
||||
default =
|
||||
if isDarwin then
|
||||
[
|
||||
"/etc/ssh/ssh_host_ed25519_key"
|
||||
"/etc/ssh/ssh_host_rsa_key"
|
||||
]
|
||||
else if (config.services.openssh.enable or false) then
|
||||
map (e: e.path) (
|
||||
lib.filter (e: e.type == "rsa" || e.type == "ed25519") config.services.openssh.hostKeys
|
||||
)
|
||||
else
|
||||
[ ];
|
||||
defaultText = literalExpression ''
|
||||
if isDarwin
|
||||
then [
|
||||
"/etc/ssh/ssh_host_ed25519_key"
|
||||
"/etc/ssh/ssh_host_rsa_key"
|
||||
]
|
||||
else if (config.services.openssh.enable or false)
|
||||
then map (e: e.path) (lib.filter (e: e.type == "rsa" || e.type == "ed25519") config.services.openssh.hostKeys)
|
||||
else [];
|
||||
'';
|
||||
description = ''
|
||||
Path to SSH keys to be used as identities in age decryption.
|
||||
'';
|
||||
};
|
||||
};
|
||||
|
||||
config = mkIf (cfg.secrets != { }) (mkMerge [
|
||||
{
|
||||
assertions = [
|
||||
{
|
||||
assertion = cfg.identityPaths != [ ];
|
||||
message = "age.identityPaths must be set, for example by enabling openssh.";
|
||||
}
|
||||
];
|
||||
}
|
||||
(optionalAttrs (!isDarwin) {
|
||||
# When using sysusers we no longer be started as an activation script
|
||||
# because those are started in initrd while sysusers is started later.
|
||||
systemd.services.agenix-install-secrets = mkIf sysusersEnabled {
|
||||
wantedBy = [ "sysinit.target" ];
|
||||
after = [ "systemd-sysusers.service" ];
|
||||
unitConfig.DefaultDependencies = "no";
|
||||
|
||||
path = [ pkgs.mount ];
|
||||
serviceConfig = {
|
||||
Type = "oneshot";
|
||||
ExecStart = pkgs.writeShellScript "agenix-install" (concatLines [
|
||||
newGeneration
|
||||
installSecrets
|
||||
chownSecrets
|
||||
]);
|
||||
RemainAfterExit = true;
|
||||
};
|
||||
};
|
||||
|
||||
# Create a new directory full of secrets for symlinking (this helps
|
||||
# ensure removed secrets are actually removed, or at least become
|
||||
# invalid symlinks).
|
||||
system.activationScripts = mkIf (!sysusersEnabled) {
|
||||
agenixNewGeneration = {
|
||||
text = newGeneration;
|
||||
deps = [
|
||||
"specialfs"
|
||||
];
|
||||
};
|
||||
|
||||
agenixInstall = {
|
||||
text = installSecrets;
|
||||
deps = [
|
||||
"agenixNewGeneration"
|
||||
"specialfs"
|
||||
];
|
||||
};
|
||||
|
||||
# So user passwords can be encrypted.
|
||||
users.deps = [ "agenixInstall" ];
|
||||
|
||||
# Change ownership and group after users and groups are made.
|
||||
agenixChown = {
|
||||
text = chownSecrets;
|
||||
deps = [
|
||||
"users"
|
||||
"groups"
|
||||
];
|
||||
};
|
||||
|
||||
# So other activation scripts can depend on agenix being done.
|
||||
agenix = {
|
||||
text = "";
|
||||
deps = [ "agenixChown" ];
|
||||
};
|
||||
};
|
||||
})
|
||||
|
||||
(optionalAttrs isDarwin {
|
||||
launchd.daemons.activate-agenix = {
|
||||
script = ''
|
||||
set -e
|
||||
set -o pipefail
|
||||
export PATH="${pkgs.gnugrep}/bin:${pkgs.coreutils}/bin:@out@/sw/bin:/usr/bin:/bin:/usr/sbin:/sbin"
|
||||
${newGeneration}
|
||||
${installSecrets}
|
||||
${chownSecrets}
|
||||
exit 0
|
||||
'';
|
||||
serviceConfig = {
|
||||
RunAtLoad = true;
|
||||
KeepAlive.SuccessfulExit = false;
|
||||
};
|
||||
};
|
||||
})
|
||||
]);
|
||||
}
|
||||
@@ -1,10 +1,3 @@
|
||||
{
|
||||
services.nixseparatedebuginfod2 = {
|
||||
enable = true;
|
||||
substituters = [
|
||||
"local:"
|
||||
"https://cache.nixos.org"
|
||||
"http://hut/cache"
|
||||
];
|
||||
};
|
||||
services.nixseparatedebuginfod.enable = true;
|
||||
}
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ lib, pkgs, ... }:
|
||||
{ lib, ... }:
|
||||
|
||||
{
|
||||
imports = [
|
||||
@@ -21,20 +21,4 @@
|
||||
};
|
||||
|
||||
services.slurm.client.enable = true;
|
||||
|
||||
# Only allow SSH connections from users who have a SLURM allocation
|
||||
# See: https://slurm.schedmd.com/pam_slurm_adopt.html
|
||||
security.pam.services.sshd.rules.account.slurm = {
|
||||
control = "required";
|
||||
enable = true;
|
||||
modulePath = "${pkgs.slurm}/lib/security/pam_slurm_adopt.so";
|
||||
args = [ "log_level=debug5" ];
|
||||
order = 999999; # Make it last one
|
||||
};
|
||||
|
||||
# Disable systemd session (pam_systemd.so) as it will conflict with the
|
||||
# pam_slurm_adopt.so module. What happens is that the shell is first adopted
|
||||
# into the slurmstepd task and then into the systemd session, which is not
|
||||
# what we want, otherwise it will linger even if all jobs are gone.
|
||||
security.pam.services.sshd.startSession = lib.mkForce false;
|
||||
}
|
||||
|
||||
@@ -1,6 +1,31 @@
|
||||
{ config, pkgs, ... }:
|
||||
|
||||
{
|
||||
let
|
||||
suspendProgram = pkgs.writeShellScript "suspend.sh" ''
|
||||
exec 1>>/var/log/power_save.log 2>>/var/log/power_save.log
|
||||
set -x
|
||||
export "PATH=/run/current-system/sw/bin:$PATH"
|
||||
echo "$(date) Suspend invoked $0 $*" >> /var/log/power_save.log
|
||||
hosts=$(scontrol show hostnames $1)
|
||||
for host in $hosts; do
|
||||
echo Shutting down host: $host
|
||||
ipmitool -I lanplus -H ''${host}-ipmi -P "" -U "" chassis power off
|
||||
done
|
||||
'';
|
||||
|
||||
resumeProgram = pkgs.writeShellScript "resume.sh" ''
|
||||
exec 1>>/var/log/power_save.log 2>>/var/log/power_save.log
|
||||
set -x
|
||||
export "PATH=/run/current-system/sw/bin:$PATH"
|
||||
echo "$(date) Suspend invoked $0 $*" >> /var/log/power_save.log
|
||||
hosts=$(scontrol show hostnames $1)
|
||||
for host in $hosts; do
|
||||
echo Starting host: $host
|
||||
ipmitool -I lanplus -H ''${host}-ipmi -P "" -U "" chassis power on
|
||||
done
|
||||
'';
|
||||
|
||||
in {
|
||||
services.slurm = {
|
||||
controlMachine = "apex";
|
||||
clusterName = "jungle";
|
||||
@@ -34,6 +59,16 @@
|
||||
# the resources. Use the task/cgroup plugin to enable process containment.
|
||||
TaskPlugin=task/affinity,task/cgroup
|
||||
|
||||
# Power off unused nodes until they are requested
|
||||
SuspendProgram=${suspendProgram}
|
||||
SuspendTimeout=60
|
||||
ResumeProgram=${resumeProgram}
|
||||
ResumeTimeout=300
|
||||
SuspendExcNodes=fox
|
||||
|
||||
# Turn the nodes off after 1 hour of inactivity
|
||||
SuspendTime=3600
|
||||
|
||||
# Reduce port range so we can allow only this range in the firewall
|
||||
SrunPortRange=60000-61000
|
||||
|
||||
@@ -51,7 +86,9 @@
|
||||
# when a task runs (srun) so we can ssh early.
|
||||
PrologFlags=Alloc,Contain,X11
|
||||
|
||||
LaunchParameters=use_interactive_step
|
||||
# LaunchParameters=ulimit_pam_adopt will set RLIMIT_RSS in processes
|
||||
# adopted by the external step, similar to tasks running in regular steps
|
||||
# LaunchParameters=ulimit_pam_adopt
|
||||
SlurmdDebug=debug5
|
||||
#DebugFlags=Protocol,Cgroup
|
||||
'';
|
||||
|
||||
@@ -1,27 +0,0 @@
|
||||
{ lib, pkgs, ... }:
|
||||
|
||||
{
|
||||
# Allow user access to FTDI USB device
|
||||
services.udev.packages = lib.singleton (pkgs.writeTextFile {
|
||||
# Needs to be < 73
|
||||
name = "60-ftdi-tc1.rules";
|
||||
text = ''
|
||||
# Bus 003 Device 003: ID 0403:6011 Future Technology Devices International, Ltd FT4232H Quad HS USB-UART/FIFO IC
|
||||
# Use := to make sure it doesn't get changed later
|
||||
SUBSYSTEMS=="usb", ATTRS{idVendor}=="0403", ATTRS{idProduct}=="6011", MODE:="0666"
|
||||
'';
|
||||
destination = "/etc/udev/rules.d/60-ftdi-tc1.rules";
|
||||
});
|
||||
|
||||
# Allow access to USB for docker in GitLab runner
|
||||
services.gitlab-runner = {
|
||||
services.gitlab-bsc-docker = {
|
||||
registrationFlags = [
|
||||
# We need raw access to the USB port to reboot the board
|
||||
"--docker-devices /dev/bus/usb/003/003"
|
||||
# And TTY access for the serial port
|
||||
"--docker-devices /dev/ttyUSB2"
|
||||
];
|
||||
};
|
||||
};
|
||||
}
|
||||
@@ -20,7 +20,7 @@
|
||||
address = "10.0.40.1";
|
||||
prefixLength = 24;
|
||||
} ];
|
||||
interfaces.ibs785.ipv4.addresses = [ {
|
||||
interfaces.ibp5s0.ipv4.addresses = [ {
|
||||
address = "10.0.42.1";
|
||||
prefixLength = 24;
|
||||
} ];
|
||||
|
||||
@@ -21,7 +21,7 @@
|
||||
prefixLength = 24;
|
||||
} ];
|
||||
# Watch out! The OmniPath device is not in the same place here:
|
||||
interfaces.ibs801.ipv4.addresses = [ {
|
||||
interfaces.ibp129s0.ipv4.addresses = [ {
|
||||
address = "10.0.42.2";
|
||||
prefixLength = 24;
|
||||
} ];
|
||||
|
||||
@@ -16,8 +16,6 @@
|
||||
../module/p.nix
|
||||
../module/vpn-dac.nix
|
||||
../module/hut-substituter.nix
|
||||
../module/tc1-board.nix
|
||||
../module/ceph.nix
|
||||
];
|
||||
|
||||
# Select the this using the ID to avoid mismatches
|
||||
@@ -65,13 +63,6 @@
|
||||
fsType = "ext4";
|
||||
};
|
||||
|
||||
# Mount the NFS home
|
||||
fileSystems."/nfs/home" = {
|
||||
device = "10.106.0.30:/home";
|
||||
fsType = "nfs";
|
||||
options = [ "nfsvers=3" "rsize=1024" "wsize=1024" "cto" "nofail" ];
|
||||
};
|
||||
|
||||
# Make a /vault/$USER directory for each user.
|
||||
systemd.services.create-vault-dirs = let
|
||||
# Take only normal users in tent
|
||||
|
||||
@@ -1,7 +1,4 @@
|
||||
{ config, lib, ... }:
|
||||
let
|
||||
cfg = config.services.gitea;
|
||||
in
|
||||
{
|
||||
services.gitea = {
|
||||
enable = true;
|
||||
@@ -29,54 +26,5 @@ in
|
||||
SENDMAIL_ARGS = "--";
|
||||
};
|
||||
};
|
||||
|
||||
dump = {
|
||||
enable = false; # Do not enable NixOS module, use our custom systemd script below
|
||||
backupDir = "/vault/backup/gitea";
|
||||
};
|
||||
};
|
||||
|
||||
systemd.services.gitea-backup = let
|
||||
exe = lib.getExe cfg.package;
|
||||
in {
|
||||
description = "Gitea daily backup";
|
||||
after = [ "gitea.service" ];
|
||||
path = [ cfg.package ];
|
||||
|
||||
environment = {
|
||||
USER = cfg.user;
|
||||
HOME = cfg.stateDir;
|
||||
GITEA_WORK_DIR = cfg.stateDir;
|
||||
GITEA_CUSTOM = cfg.customDir;
|
||||
};
|
||||
|
||||
serviceConfig = {
|
||||
Type = "oneshot";
|
||||
User = cfg.user;
|
||||
WorkingDirectory = cfg.dump.backupDir;
|
||||
};
|
||||
|
||||
script = ''
|
||||
name="gitea-dump-$(date +%a).${cfg.dump.type}"
|
||||
${exe} dump --type ${cfg.dump.type} --file - >"$name.tmp"
|
||||
mv "$name.tmp" "$name"
|
||||
cp "$name" "/ceph/backup/gitea/$name"
|
||||
'';
|
||||
};
|
||||
|
||||
# Create also the /ceph directories if needed
|
||||
systemd.tmpfiles.rules = [
|
||||
"d /ceph/backup/gitea/ 0750 ${cfg.user} ${cfg.group} - -"
|
||||
"z /ceph/backup/gitea/ 0750 ${cfg.user} ${cfg.group} - -"
|
||||
];
|
||||
|
||||
systemd.timers.gitea-backup = {
|
||||
description = "Update timer for gitea-backup";
|
||||
partOf = [ "gitea-backup.service" ];
|
||||
wantedBy = [ "timers.target" ];
|
||||
timerConfig.OnCalendar = cfg.dump.interval;
|
||||
};
|
||||
|
||||
# Allow gitea user to send mail
|
||||
users.users.gitea.extraGroups = [ "mail-robot" ];
|
||||
}
|
||||
|
||||
@@ -43,7 +43,6 @@
|
||||
registrationFlags = [
|
||||
# Increase build log length to 64 MiB
|
||||
"--output-limit 65536"
|
||||
"--docker-network-mode host"
|
||||
];
|
||||
preBuildScript = pkgs.writeScript "setup-container" ''
|
||||
mkdir -p -m 0755 /nix/var/log/nix/drvs
|
||||
|
||||
@@ -4,8 +4,8 @@ let
|
||||
name = "jungle-web";
|
||||
src = pkgs.fetchgit {
|
||||
url = "https://jungle.bsc.es/git/rarias/jungle-website.git";
|
||||
rev = "5f18335d14126d2fef134c0cd441771436f7dfa1";
|
||||
hash = "sha256-s9VBF91sQ7hg9+lrwNFPYgoXTTyXaQcAulCiGJgWERo=";
|
||||
rev = "739bf0175a7f05380fe7ad7023ff1d60db1710e1";
|
||||
hash = "sha256-ea5DzhYTzZ9TmqD+x95rdNdLbxPnBluqlYH2NmBYmc4=";
|
||||
};
|
||||
buildInputs = [ pkgs.hugo ];
|
||||
buildPhase = ''
|
||||
|
||||
@@ -25,7 +25,7 @@
|
||||
address = "10.0.40.6";
|
||||
prefixLength = 24;
|
||||
} ];
|
||||
interfaces.ibs785.ipv4.addresses = [ {
|
||||
interfaces.ibp5s0.ipv4.addresses = [ {
|
||||
address = "10.0.42.6";
|
||||
prefixLength = 24;
|
||||
} ];
|
||||
|
||||
64
overlay.nix
64
overlay.nix
@@ -7,7 +7,6 @@ let
|
||||
callPackage = final.callPackage;
|
||||
|
||||
bscPkgs = {
|
||||
agenix = prev.callPackage ./pkgs/agenix/default.nix { };
|
||||
amd-uprof = prev.callPackage ./pkgs/amd-uprof/default.nix { };
|
||||
bench6 = callPackage ./pkgs/bench6/default.nix { };
|
||||
bigotes = callPackage ./pkgs/bigotes/default.nix { };
|
||||
@@ -19,12 +18,7 @@ let
|
||||
cudainfo = prev.callPackage ./pkgs/cudainfo/default.nix { };
|
||||
#extrae = callPackage ./pkgs/extrae/default.nix { }; # Broken and outdated
|
||||
gpi-2 = callPackage ./pkgs/gpi-2/default.nix { };
|
||||
gromacs = callPackage ./pkgs/gromacs/default.nix { enableSYCL = true; };
|
||||
intel-apt = callPackage ./pkgs/intel-oneapi/packages.nix { };
|
||||
intelPackages_2023 = callPackage ./pkgs/intel-oneapi/2023.nix { };
|
||||
intelPackages_2024 = final.intel-apt.hpckit_2024;
|
||||
intelPackages_2025 = final.intel-apt.hpckit_2025;
|
||||
intelPackages = final.intelPackages_2025;
|
||||
jemallocNanos6 = callPackage ./pkgs/nanos6/jemalloc.nix { };
|
||||
# FIXME: Extend this to all linuxPackages variants. Open problem, see:
|
||||
# https://discourse.nixos.org/t/whats-the-right-way-to-make-a-custom-kernel-module-available/4636
|
||||
@@ -34,37 +28,28 @@ let
|
||||
linuxPackages_latest = prev.linuxPackages_latest.extend(_final: _prev: {
|
||||
amd-uprof-driver = _prev.callPackage ./pkgs/amd-uprof/driver.nix { };
|
||||
});
|
||||
llvm-intel-unwrapped = callPackage ./pkgs/llvm-intel/default.nix { };
|
||||
llvm-intel = callPackage ./pkgs/llvm-intel/wrapped.nix { };
|
||||
lmbench = callPackage ./pkgs/lmbench/default.nix { };
|
||||
# Broken and unmantained
|
||||
# mcxx = callPackage ./pkgs/mcxx/default.nix { };
|
||||
mcxx = callPackage ./pkgs/mcxx/default.nix { };
|
||||
meteocat-exporter = prev.callPackage ./pkgs/meteocat-exporter/default.nix { };
|
||||
mpi = final.mpich; # Set MPICH as default
|
||||
mpich = callPackage ./pkgs/mpich/default.nix { mpich = prev.mpich; };
|
||||
nanos6 = callPackage ./pkgs/nanos6/default.nix { };
|
||||
nanos6Debug = final.nanos6.override { enableDebug = true; };
|
||||
nixtools = callPackage ./pkgs/nixtools/default.nix { };
|
||||
nixgen = callPackage ./pkgs/nixgen/default.nix { };
|
||||
# Broken because of pkgsStatic.libcap
|
||||
# See: https://github.com/NixOS/nixpkgs/pull/268791
|
||||
#nix-wrap = callPackage ./pkgs/nix-wrap/default.nix { };
|
||||
nodes = callPackage ./pkgs/nodes/default.nix { };
|
||||
nosv = callPackage ./pkgs/nosv/default.nix { };
|
||||
oneMath = callPackage ./pkgs/onemath/default.nix { };
|
||||
openmp = callPackage ./pkgs/llvm-ompss2/openmp.nix { monorepoSrc = final.clangOmpss2Unwrapped.src; version = final.clangOmpss2Unwrapped.version; };
|
||||
openmpv = final.openmp.override { enableNosv = true; enableOvni = true; };
|
||||
osumb = callPackage ./pkgs/osu/default.nix { };
|
||||
ovni = callPackage ./pkgs/ovni/default.nix { };
|
||||
ovniGit = final.ovni.override { useGit = true; };
|
||||
paraverKernel = callPackage ./pkgs/paraver/kernel.nix { };
|
||||
pocl = callPackage ./pkgs/pocl/default.nix { };
|
||||
pocl-noicd = callPackage ./pkgs/pocl/default.nix { enableICD = false; };
|
||||
prometheus-slurm-exporter = prev.callPackage ./pkgs/slurm-exporter/default.nix { };
|
||||
#pscom = callPackage ./pkgs/parastation/pscom.nix { }; # Unmaintaned
|
||||
#psmpi = callPackage ./pkgs/parastation/psmpi.nix { }; # Unmaintaned
|
||||
rodinia = callPackage ./pkgs/rodinia/default.nix { };
|
||||
slurm = import ./pkgs/slurm/default.nix { slurm = prev.slurm; };
|
||||
sonar = callPackage ./pkgs/sonar/default.nix { };
|
||||
stdenvClangOmpss2 = final.stdenv.override { cc = final.clangOmpss2; allowedRequisites = null; };
|
||||
stdenvClangOmpss2Nanos6 = final.stdenv.override { cc = final.clangOmpss2Nanos6; allowedRequisites = null; };
|
||||
@@ -72,9 +57,6 @@ let
|
||||
stdenvClangOmpss2NodesOmpv = final.stdenv.override { cc = final.clangOmpss2NodesOmpv; allowedRequisites = null; };
|
||||
tagaspi = callPackage ./pkgs/tagaspi/default.nix { };
|
||||
tampi = callPackage ./pkgs/tampi/default.nix { };
|
||||
tasycl = callPackage ./pkgs/tasycl/default.nix { };
|
||||
tasycl-acpp = callPackage ./pkgs/tasycl/default.nix { useIntel = false; };
|
||||
unified-runtime = callPackage ./pkgs/unified-runtime/default.nix { };
|
||||
upc-qaire-exporter = prev.callPackage ./pkgs/upc-qaire-exporter/default.nix { };
|
||||
wxparaver = callPackage ./pkgs/paraver/default.nix { };
|
||||
};
|
||||
@@ -84,13 +66,6 @@ let
|
||||
#sigsegv = callPackage ./test/reproducers/sigsegv.nix { };
|
||||
hello-c = callPackage ./test/compilers/hello-c.nix { };
|
||||
hello-cpp = callPackage ./test/compilers/hello-cpp.nix { };
|
||||
hello-sycl = callPackage ./test/compilers/hello-sycl.nix { };
|
||||
hello-syclompss = callPackage ./test/compilers/icpx-ompss2.nix { };
|
||||
hello-sycl-pocl = (callPackage ./test/compilers/hello-sycl.nix { }).withPocl;
|
||||
hello-sycl-intel = (callPackage ./test/compilers/hello-sycl.nix { }).withIntel;
|
||||
hello-syclompss-pocl = (callPackage ./test/compilers/icpx-ompss2.nix { }).withPocl;
|
||||
hello-syclompss-intel = (callPackage ./test/compilers/icpx-ompss2.nix { }).withIntel;
|
||||
|
||||
lto = callPackage ./test/compilers/lto.nix { };
|
||||
asan = callPackage ./test/compilers/asan.nix { };
|
||||
intel2023-icx-c = hello-c.override { stdenv = final.intelPackages_2023.stdenv; };
|
||||
@@ -100,13 +75,6 @@ let
|
||||
intel2023-ifort = callPackage ./test/compilers/hello-f.nix {
|
||||
stdenv = final.intelPackages_2023.stdenv-ifort;
|
||||
};
|
||||
intel2024-icx-c = hello-c.override { stdenv = final.intelPackages_2024.stdenv; };
|
||||
intel2025-icx-c = hello-c.override { stdenv = final.intelPackages_2025.stdenv; };
|
||||
intel2024-icx-cpp = hello-cpp.override { stdenv = final.intelPackages_2024.stdenv; };
|
||||
intel2025-icx-cpp = hello-cpp.override { stdenv = final.intelPackages_2025.stdenv; };
|
||||
# intel2023-sycl = hello-sycl.override { intelPackages = final.intelPackages_2023; }; # broken
|
||||
intel2024-sycl = hello-sycl.override { intelPackages = final.intelPackages_2024; };
|
||||
intel2025-sycl = hello-sycl.override { intelPackages = final.intelPackages_2025; };
|
||||
clangOmpss2-lto = lto.override { stdenv = final.stdenvClangOmpss2Nanos6; };
|
||||
clangOmpss2-asan = asan.override { stdenv = final.stdenvClangOmpss2Nanos6; };
|
||||
clangOmpss2-task = callPackage ./test/compilers/ompss2.nix {
|
||||
@@ -124,31 +92,20 @@ let
|
||||
clangNosvOmpv-ld = callPackage ./test/compilers/clang-openmp-ld.nix {
|
||||
stdenv = final.stdenvClangOmpss2NodesOmpv;
|
||||
};
|
||||
|
||||
ocl-build = callPackage ./test/compilers/opencl.nix { };
|
||||
ocl-build-noicd = callPackage ./test/compilers/opencl.nix { ocl-icd = final.pocl-noicd; };
|
||||
|
||||
pocl = callPackage ./test/compilers/pocl.nix { };
|
||||
ocl-run-pocl = ocl-build.test-icd;
|
||||
ocl-run-pocl-noicd = ocl-build-noicd.test-noicd;
|
||||
|
||||
sycl-ls = callPackage ./test/compilers/sycl-ls.nix { };
|
||||
};
|
||||
|
||||
# For now, only build toplevel packages in CI/Hydra
|
||||
pkgsTopLevel = filterAttrs (_: isDerivation) bscPkgs;
|
||||
|
||||
# Native build in that platform doesn't imply cross build works
|
||||
canCrossCompile = platform: default: pkg:
|
||||
canCrossCompile = platform: pkg:
|
||||
(isDerivation pkg) &&
|
||||
# If meta.cross is undefined, use default
|
||||
(pkg.meta.cross or default) &&
|
||||
(meta.availableOn final.pkgsCross.${platform}.stdenv.hostPlatform pkg);
|
||||
# Must be defined explicitly
|
||||
(pkg.meta.cross or false) &&
|
||||
(meta.availableOn platform pkg);
|
||||
|
||||
# For now only RISC-V
|
||||
crossSet = genAttrs [ "riscv64" ] (platform:
|
||||
filterAttrs (_: canCrossCompile platform true)
|
||||
final.pkgsCross.${platform}.bsc.pkgsTopLevel);
|
||||
crossSet = { riscv64 = final.pkgsCross.riscv64.bsc.pkgsTopLevel; };
|
||||
|
||||
buildList = name: paths:
|
||||
final.runCommandLocal name { } ''
|
||||
@@ -168,17 +125,10 @@ let
|
||||
# For now only RISC-V
|
||||
crossList = buildList "ci-cross"
|
||||
(filter
|
||||
(canCrossCompile "riscv64" false) # opt-in (pkgs with: meta.cross = true)
|
||||
(canCrossCompile final.pkgsCross.riscv64.stdenv.hostPlatform)
|
||||
(builtins.attrValues crossSet.riscv64));
|
||||
|
||||
in bscPkgs // {
|
||||
|
||||
lib = prev.lib // {
|
||||
maintainers = prev.lib.maintainers // {
|
||||
bsc = import ./pkgs/maintainers.nix;
|
||||
};
|
||||
};
|
||||
|
||||
# Prevent accidental usage of bsc-ci attribute
|
||||
bsc-ci = throw "the bsc-ci attribute is deprecated, use bsc.ci";
|
||||
|
||||
|
||||
@@ -1,212 +0,0 @@
|
||||
#!/usr/bin/env bash
|
||||
set -Eeuo pipefail
|
||||
|
||||
PACKAGE="agenix"
|
||||
|
||||
function show_help () {
|
||||
echo "$PACKAGE - edit and rekey age secret files"
|
||||
echo " "
|
||||
echo "$PACKAGE -e FILE [-i PRIVATE_KEY]"
|
||||
echo "$PACKAGE -r [-i PRIVATE_KEY]"
|
||||
echo ' '
|
||||
echo 'options:'
|
||||
echo '-h, --help show help'
|
||||
# shellcheck disable=SC2016
|
||||
echo '-e, --edit FILE edits FILE using $EDITOR'
|
||||
echo '-r, --rekey re-encrypts all secrets with specified recipients'
|
||||
echo '-d, --decrypt FILE decrypts FILE to STDOUT'
|
||||
echo '-i, --identity identity to use when decrypting'
|
||||
echo '-v, --verbose verbose output'
|
||||
echo ' '
|
||||
echo 'FILE an age-encrypted file'
|
||||
echo ' '
|
||||
echo 'PRIVATE_KEY a path to a private SSH key used to decrypt file'
|
||||
echo ' '
|
||||
echo 'EDITOR environment variable of editor to use when editing FILE'
|
||||
echo ' '
|
||||
echo 'If STDIN is not interactive, EDITOR will be set to "cp /dev/stdin"'
|
||||
echo ' '
|
||||
echo 'RULES environment variable with path to Nix file specifying recipient public keys.'
|
||||
echo "Defaults to './secrets.nix'"
|
||||
echo ' '
|
||||
echo "agenix version: @version@"
|
||||
echo "age binary path: @ageBin@"
|
||||
echo "age version: $(@ageBin@ --version)"
|
||||
}
|
||||
|
||||
function warn() {
|
||||
printf '%s\n' "$*" >&2
|
||||
}
|
||||
|
||||
function err() {
|
||||
warn "$*"
|
||||
exit 1
|
||||
}
|
||||
|
||||
test $# -eq 0 && (show_help && exit 1)
|
||||
|
||||
REKEY=0
|
||||
DECRYPT_ONLY=0
|
||||
DEFAULT_DECRYPT=(--decrypt)
|
||||
|
||||
while test $# -gt 0; do
|
||||
case "$1" in
|
||||
-h|--help)
|
||||
show_help
|
||||
exit 0
|
||||
;;
|
||||
-e|--edit)
|
||||
shift
|
||||
if test $# -gt 0; then
|
||||
export FILE=$1
|
||||
else
|
||||
echo "no FILE specified"
|
||||
exit 1
|
||||
fi
|
||||
shift
|
||||
;;
|
||||
-i|--identity)
|
||||
shift
|
||||
if test $# -gt 0; then
|
||||
DEFAULT_DECRYPT+=(--identity "$1")
|
||||
else
|
||||
echo "no PRIVATE_KEY specified"
|
||||
exit 1
|
||||
fi
|
||||
shift
|
||||
;;
|
||||
-r|--rekey)
|
||||
shift
|
||||
REKEY=1
|
||||
;;
|
||||
-d|--decrypt)
|
||||
shift
|
||||
DECRYPT_ONLY=1
|
||||
if test $# -gt 0; then
|
||||
export FILE=$1
|
||||
else
|
||||
echo "no FILE specified"
|
||||
exit 1
|
||||
fi
|
||||
shift
|
||||
;;
|
||||
-v|--verbose)
|
||||
shift
|
||||
set -x
|
||||
;;
|
||||
*)
|
||||
show_help
|
||||
exit 1
|
||||
;;
|
||||
esac
|
||||
done
|
||||
|
||||
RULES=${RULES:-./secrets.nix}
|
||||
function cleanup {
|
||||
if [ -n "${CLEARTEXT_DIR+x}" ]
|
||||
then
|
||||
rm -rf -- "$CLEARTEXT_DIR"
|
||||
fi
|
||||
if [ -n "${REENCRYPTED_DIR+x}" ]
|
||||
then
|
||||
rm -rf -- "$REENCRYPTED_DIR"
|
||||
fi
|
||||
}
|
||||
trap "cleanup" 0 2 3 15
|
||||
|
||||
function keys {
|
||||
(@nixInstantiate@ --json --eval --strict -E "(let rules = import $RULES; in rules.\"$1\".publicKeys)" | @jqBin@ -r .[]) || exit 1
|
||||
}
|
||||
|
||||
function armor {
|
||||
(@nixInstantiate@ --json --eval --strict -E "(let rules = import $RULES; in (builtins.hasAttr \"armor\" rules.\"$1\" && rules.\"$1\".armor))") || exit 1
|
||||
}
|
||||
|
||||
function decrypt {
|
||||
FILE=$1
|
||||
KEYS=$2
|
||||
if [ -z "$KEYS" ]
|
||||
then
|
||||
err "There is no rule for $FILE in $RULES."
|
||||
fi
|
||||
|
||||
if [ -f "$FILE" ]
|
||||
then
|
||||
DECRYPT=("${DEFAULT_DECRYPT[@]}")
|
||||
if [[ "${DECRYPT[*]}" != *"--identity"* ]]; then
|
||||
if [ -f "$HOME/.ssh/id_rsa" ]; then
|
||||
DECRYPT+=(--identity "$HOME/.ssh/id_rsa")
|
||||
fi
|
||||
if [ -f "$HOME/.ssh/id_ed25519" ]; then
|
||||
DECRYPT+=(--identity "$HOME/.ssh/id_ed25519")
|
||||
fi
|
||||
fi
|
||||
if [[ "${DECRYPT[*]}" != *"--identity"* ]]; then
|
||||
err "No identity found to decrypt $FILE. Try adding an SSH key at $HOME/.ssh/id_rsa or $HOME/.ssh/id_ed25519 or using the --identity flag to specify a file."
|
||||
fi
|
||||
|
||||
@ageBin@ "${DECRYPT[@]}" -- "$FILE" || exit 1
|
||||
fi
|
||||
}
|
||||
|
||||
function edit {
|
||||
FILE=$1
|
||||
KEYS=$(keys "$FILE") || exit 1
|
||||
ARMOR=$(armor "$FILE") || exit 1
|
||||
|
||||
CLEARTEXT_DIR=$(@mktempBin@ -d)
|
||||
CLEARTEXT_FILE="$CLEARTEXT_DIR/$(basename -- "$FILE")"
|
||||
DEFAULT_DECRYPT+=(-o "$CLEARTEXT_FILE")
|
||||
|
||||
decrypt "$FILE" "$KEYS" || exit 1
|
||||
|
||||
[ ! -f "$CLEARTEXT_FILE" ] || cp -- "$CLEARTEXT_FILE" "$CLEARTEXT_FILE.before"
|
||||
|
||||
[ -t 0 ] || EDITOR='cp -- /dev/stdin'
|
||||
|
||||
$EDITOR "$CLEARTEXT_FILE"
|
||||
|
||||
if [ ! -f "$CLEARTEXT_FILE" ]
|
||||
then
|
||||
warn "$FILE wasn't created."
|
||||
return
|
||||
fi
|
||||
[ -f "$FILE" ] && [ "$EDITOR" != ":" ] && @diffBin@ -q -- "$CLEARTEXT_FILE.before" "$CLEARTEXT_FILE" && warn "$FILE wasn't changed, skipping re-encryption." && return
|
||||
|
||||
ENCRYPT=()
|
||||
if [[ "$ARMOR" == "true" ]]; then
|
||||
ENCRYPT+=(--armor)
|
||||
fi
|
||||
while IFS= read -r key
|
||||
do
|
||||
if [ -n "$key" ]; then
|
||||
ENCRYPT+=(--recipient "$key")
|
||||
fi
|
||||
done <<< "$KEYS"
|
||||
|
||||
REENCRYPTED_DIR=$(@mktempBin@ -d)
|
||||
REENCRYPTED_FILE="$REENCRYPTED_DIR/$(basename -- "$FILE")"
|
||||
|
||||
ENCRYPT+=(-o "$REENCRYPTED_FILE")
|
||||
|
||||
@ageBin@ "${ENCRYPT[@]}" <"$CLEARTEXT_FILE" || exit 1
|
||||
|
||||
mkdir -p -- "$(dirname -- "$FILE")"
|
||||
|
||||
mv -f -- "$REENCRYPTED_FILE" "$FILE"
|
||||
}
|
||||
|
||||
function rekey {
|
||||
FILES=$( (@nixInstantiate@ --json --eval -E "(let rules = import $RULES; in builtins.attrNames rules)" | @jqBin@ -r .[]) || exit 1)
|
||||
|
||||
for FILE in $FILES
|
||||
do
|
||||
warn "rekeying $FILE..."
|
||||
EDITOR=: edit "$FILE"
|
||||
cleanup
|
||||
done
|
||||
}
|
||||
|
||||
[ $REKEY -eq 1 ] && rekey && exit 0
|
||||
[ $DECRYPT_ONLY -eq 1 ] && DEFAULT_DECRYPT+=("-o" "-") && decrypt "${FILE}" "$(keys "$FILE")" && exit 0
|
||||
edit "$FILE" && cleanup && exit 0
|
||||
@@ -1,66 +0,0 @@
|
||||
{
|
||||
lib,
|
||||
stdenv,
|
||||
age,
|
||||
jq,
|
||||
nix,
|
||||
mktemp,
|
||||
diffutils,
|
||||
replaceVars,
|
||||
ageBin ? "${age}/bin/age",
|
||||
shellcheck,
|
||||
}:
|
||||
let
|
||||
bin = "${placeholder "out"}/bin/agenix";
|
||||
in
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "agenix";
|
||||
version = "0.15.0";
|
||||
src = replaceVars ./agenix.sh {
|
||||
inherit ageBin version;
|
||||
jqBin = "${jq}/bin/jq";
|
||||
nixInstantiate = "${nix}/bin/nix-instantiate";
|
||||
mktempBin = "${mktemp}/bin/mktemp";
|
||||
diffBin = "${diffutils}/bin/diff";
|
||||
};
|
||||
dontUnpack = true;
|
||||
doInstallCheck = true;
|
||||
installCheckInputs = [ shellcheck ];
|
||||
postInstallCheck = ''
|
||||
shellcheck ${bin}
|
||||
${bin} -h | grep ${version}
|
||||
|
||||
test_tmp=$(mktemp -d 2>/dev/null || mktemp -d -t 'mytmpdir')
|
||||
export HOME="$test_tmp/home"
|
||||
export NIX_STORE_DIR="$test_tmp/nix/store"
|
||||
export NIX_STATE_DIR="$test_tmp/nix/var"
|
||||
mkdir -p "$HOME" "$NIX_STORE_DIR" "$NIX_STATE_DIR"
|
||||
function cleanup {
|
||||
rm -rf "$test_tmp"
|
||||
}
|
||||
trap "cleanup" 0 2 3 15
|
||||
|
||||
mkdir -p $HOME/.ssh
|
||||
cp -r "${./example}" $HOME/secrets
|
||||
chmod -R u+rw $HOME/secrets
|
||||
(
|
||||
umask u=rw,g=r,o=r
|
||||
cp ${./example_keys/user1.pub} $HOME/.ssh/id_ed25519.pub
|
||||
chown $UID $HOME/.ssh/id_ed25519.pub
|
||||
)
|
||||
(
|
||||
umask u=rw,g=,o=
|
||||
cp ${./example_keys/user1} $HOME/.ssh/id_ed25519
|
||||
chown $UID $HOME/.ssh/id_ed25519
|
||||
)
|
||||
|
||||
cd $HOME/secrets
|
||||
test $(${bin} -d secret1.age) = "hello"
|
||||
'';
|
||||
|
||||
installPhase = ''
|
||||
install -D $src ${bin}
|
||||
'';
|
||||
|
||||
meta.description = "age-encrypted secrets for NixOS";
|
||||
}
|
||||
@@ -1,7 +0,0 @@
|
||||
age-encryption.org/v1
|
||||
-> ssh-ed25519 V3XmEA zirqdzZZ1E+sedBn7fbEHq4ntLEkokZ4GctarBBOHXY
|
||||
Rvs5YHaAUeCZyNwPedubPcHClWYIuXXWA5zadXPWY6w
|
||||
-> ssh-ed25519 KLPP8w BVp4rDkOYSQyn8oVeHFeinSqW+pdVtxBF9+5VM1yORY
|
||||
bMwppAi8Nhz0328taU4AzUkTVyWtSLvFZG6c5W/Fs78
|
||||
--- xCbqLhXAcOziO2wmbjTiSQfZvt5Rlsc4SCvF+iEzpQA
|
||||
<EFBFBD>KB<EFBFBD><EFBFBD>/<2F>Z<><5A>r<EFBFBD>%<01><>4<EFBFBD><34><EFBFBD>Mq5<71><35>_<EFBFBD><5F>ݒ<><DD92><EFBFBD><EFBFBD><EFBFBD>11ܨqM;& <20><>Lr<4C><72><EFBFBD>f<EFBFBD><66><EFBFBD>]>N
|
||||
@@ -1,7 +0,0 @@
|
||||
-----BEGIN AGE ENCRYPTED FILE-----
|
||||
YWdlLWVuY3J5cHRpb24ub3JnL3YxCi0+IHNzaC1lZDI1NTE5IFYzWG1FQSBpZkZW
|
||||
aFpLNnJxc0VUMHRmZ2dZS0pjMGVENnR3OHd5K0RiT1RjRUhibFZBCnN5UG5vUjA3
|
||||
SXpsNGtiVUw4T0tIVFo5Wkk5QS9NQlBndzVvektiQ0ozc0kKLS0tIGxyY1Q4dEZ1
|
||||
VGZEanJyTFNta2JNRmpZb2FnK2JyS1hSVml1UGdMNWZKQXMKYla+wTXcRedyZoEb
|
||||
LVWaSx49WoUTU0KBPJg9RArxaeC23GoCDzR/aM/1DvYU
|
||||
-----END AGE ENCRYPTED FILE-----
|
||||
@@ -1,9 +0,0 @@
|
||||
age-encryption.org/v1
|
||||
-> ssh-ed25519 KLPP8w s1DYZRlZuSsyhmZCF1lFB+E9vB8bZ/+ZhBRlx8nprwE
|
||||
nmYVCsVBrX2CFXXPU+D+bbkkIe/foofp+xoUrg9DHZw
|
||||
-> ssh-ed25519 V3XmEA Pwv3oCwcY0DX8rY48UNfsj9RumWsn4dbgorYHCwObgI
|
||||
FKxRYkL3JHtJxUwymWDF0rAtJ33BivDI6IfPsfumM90
|
||||
-> V'v(/u$-grease em/Vgf 2qDuk
|
||||
7I3iiQLPGi1COML9u/JeYkr7EqbSLoU
|
||||
--- 57WJRigUGtmcObrssS3s4PvmR8wgh1AOC/ijJn1s3xI
|
||||
<EFBFBD>'K<>ƷY&<26>7G<37>O<EFBFBD><4F>Fj<13>k<EFBFBD>X<EFBFBD><58>BnuJ<75><4A>:9<>(<><7F><EFBFBD>X<EFBFBD>#<23>A<EFBFBD><41><EFBFBD><EFBFBD>ڧj<DAA7>,<02>_<17><><EFBFBD>?<3F>Z<EFBFBD><17>v<EFBFBD><76>V<EFBFBD>96]oks~%<25>c <04>e^C<>%JQ5<51><H<>z}<7D>C<EFBFBD>,<2C>p<EFBFBD><70>*!W<><57><EFBFBD>A<EFBFBD><41><EFBFBD>҅dC<15>K)<10><>-<2D>y
|
||||
Binary file not shown.
@@ -1,5 +0,0 @@
|
||||
age-encryption.org/v1
|
||||
-> ssh-ed25519 V3XmEA OB4+1FbPhQ3r6iGksM7peWX5it8NClpXIq/o5nnP7GA
|
||||
FmHVUj+A5i5+bDFgySQskmlvynnosJiWUTJmBRiNA9I
|
||||
--- tP+3mFVtd7ogVu1Lkboh55zoi5a77Ht08Uc/QuIviv4
|
||||
<EFBFBD><EFBFBD>X<EFBFBD>{<7B><>O<EFBFBD><4F><1F><04>tMXx<58>vӪ(<28>I<EFBFBD>myP<79><50><EFBFBD><EFBFBD>+3<>S3i
|
||||
@@ -1,23 +0,0 @@
|
||||
let
|
||||
user1 = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIL0idNvgGiucWgup/mP78zyC23uFjYq0evcWdjGQUaBH";
|
||||
system1 = "ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIPJDyIr/FSz1cJdcoW69R+NrWzwGK/+3gJpqD1t8L2zE";
|
||||
in
|
||||
{
|
||||
"secret1.age".publicKeys = [
|
||||
user1
|
||||
system1
|
||||
];
|
||||
"secret2.age".publicKeys = [ user1 ];
|
||||
"passwordfile-user1.age".publicKeys = [
|
||||
user1
|
||||
system1
|
||||
];
|
||||
"-leading-hyphen-filename.age".publicKeys = [
|
||||
user1
|
||||
system1
|
||||
];
|
||||
"armored-secret.age" = {
|
||||
publicKeys = [ user1 ];
|
||||
armor = true;
|
||||
};
|
||||
}
|
||||
@@ -1,7 +0,0 @@
|
||||
-----BEGIN OPENSSH PRIVATE KEY-----
|
||||
b3BlbnNzaC1rZXktdjEAAAAABG5vbmUAAAAEbm9uZQAAAAAAAAABAAAAMwAAAAtzc2gtZW
|
||||
QyNTUxOQAAACDyQ8iK/xUs9XCXXKFuvUfja1s8Biv/t4Caag9bfC9sxAAAAJA3yvCWN8rw
|
||||
lgAAAAtzc2gtZWQyNTUxOQAAACDyQ8iK/xUs9XCXXKFuvUfja1s8Biv/t4Caag9bfC9sxA
|
||||
AAAEA+J2V6AG1NriAIvnNKRauIEh1JE9HSdhvKJ68a5Fm0w/JDyIr/FSz1cJdcoW69R+Nr
|
||||
WzwGK/+3gJpqD1t8L2zEAAAADHJ5YW50bUBob21lMQE=
|
||||
-----END OPENSSH PRIVATE KEY-----
|
||||
@@ -1 +0,0 @@
|
||||
ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIPJDyIr/FSz1cJdcoW69R+NrWzwGK/+3gJpqD1t8L2zE
|
||||
@@ -1,7 +0,0 @@
|
||||
-----BEGIN OPENSSH PRIVATE KEY-----
|
||||
b3BlbnNzaC1rZXktdjEAAAAABG5vbmUAAAAEbm9uZQAAAAAAAAABAAAAMwAAAAtzc2gtZW
|
||||
QyNTUxOQAAACC9InTb4BornFoLqf5j+/M8gtt7hY2KtHr3FnYxkFGgRwAAAJC2JJ8htiSf
|
||||
IQAAAAtzc2gtZWQyNTUxOQAAACC9InTb4BornFoLqf5j+/M8gtt7hY2KtHr3FnYxkFGgRw
|
||||
AAAEDxt5gC/s53IxiKAjfZJVCCcFIsdeERdIgbYhLO719+Kb0idNvgGiucWgup/mP78zyC
|
||||
23uFjYq0evcWdjGQUaBHAAAADHJ5YW50bUBob21lMQE=
|
||||
-----END OPENSSH PRIVATE KEY-----
|
||||
@@ -1 +0,0 @@
|
||||
ssh-ed25519 AAAAC3NzaC1lZDI1NTE5AAAAIL0idNvgGiucWgup/mP78zyC23uFjYq0evcWdjGQUaBH
|
||||
@@ -1,23 +0,0 @@
|
||||
#!/bin/sh
|
||||
|
||||
set -e
|
||||
|
||||
# All operations are done relative to root
|
||||
GITROOT=$(git rev-parse --show-toplevel)
|
||||
cd "$GITROOT"
|
||||
|
||||
REVISION=${1:-main}
|
||||
|
||||
TMPCLONE=$(mktemp -d)
|
||||
trap "rm -rf ${TMPCLONE}" EXIT
|
||||
|
||||
git clone https://github.com/ryantm/agenix.git --revision="$REVISION" "$TMPCLONE" --depth=1
|
||||
|
||||
cp "${TMPCLONE}/pkgs/agenix.sh" pkgs/agenix/agenix.sh
|
||||
cp "${TMPCLONE}/pkgs/agenix.nix" pkgs/agenix/default.nix
|
||||
sed -i 's#../example#./example#' pkgs/agenix/default.nix
|
||||
|
||||
cp "${TMPCLONE}/example/"* pkgs/agenix/example/
|
||||
cp "${TMPCLONE}/example_keys/"* pkgs/agenix/example_keys/
|
||||
|
||||
cp "${TMPCLONE}/modules/age.nix" m/module/agenix.nix
|
||||
@@ -86,13 +86,4 @@ in
|
||||
patchelf --add-needed libnuma.so $out/bin/AMDuProfPcm
|
||||
set +x
|
||||
'';
|
||||
|
||||
meta = {
|
||||
description = "Performance analysis tool-suite for x86 based applications";
|
||||
homepage = "https://www.amd.com/es/developer/uprof.html";
|
||||
platforms = [ "x86_64-linux" ];
|
||||
license = lib.licenses.unfree;
|
||||
maintainers = with lib.maintainers.bsc; [ rarias varcila ];
|
||||
};
|
||||
|
||||
}
|
||||
|
||||
@@ -19,7 +19,7 @@ in stdenv.mkDerivation {
|
||||
'';
|
||||
hardeningDisable = [ "pic" "format" ];
|
||||
nativeBuildInputs = kernel.moduleBuildDependencies;
|
||||
patches = [ ./makefile.patch ./hrtimer.patch ./remove-wr-rdmsrq.patch ];
|
||||
patches = [ ./makefile.patch ./hrtimer.patch ];
|
||||
makeFlags = [
|
||||
"KERNEL_VERSION=${kernel.modDirVersion}"
|
||||
"KERNEL_DIR=${kernel.dev}/lib/modules/${kernel.modDirVersion}/build"
|
||||
@@ -29,7 +29,5 @@ in stdenv.mkDerivation {
|
||||
description = "AMD Power Profiler Driver";
|
||||
homepage = "https://www.amd.com/es/developer/uprof.html";
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.unfree;
|
||||
maintainers = with lib.maintainers.bsc; [ rarias varcila ];
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,20 +0,0 @@
|
||||
diff --git a/inc/PwrProfAsm.h b/inc/PwrProfAsm.h
|
||||
index d77770a..c93a0e9 100644
|
||||
--- a/inc/PwrProfAsm.h
|
||||
+++ b/inc/PwrProfAsm.h
|
||||
@@ -347,6 +347,7 @@
|
||||
|
||||
#endif
|
||||
|
||||
+/*
|
||||
#define rdmsrq(msr,val1,val2,val3,val4) ({ \
|
||||
__asm__ __volatile__( \
|
||||
"rdmsr\n" \
|
||||
@@ -362,6 +363,7 @@
|
||||
:"c"(msr), "a"(val1), "d"(val2), "S"(val3), "D"(val4) \
|
||||
); \
|
||||
})
|
||||
+*/
|
||||
|
||||
#define rdmsrpw(msr,val1,val2,val3,val4) ({ \
|
||||
__asm__ __volatile__( \
|
||||
@@ -1,6 +1,5 @@
|
||||
{
|
||||
stdenv
|
||||
, lib
|
||||
, bigotes
|
||||
, cmake
|
||||
, clangOmpss2
|
||||
@@ -59,12 +58,4 @@ stdenv.mkDerivation rec {
|
||||
];
|
||||
hardeningDisable = [ "all" ];
|
||||
dontStrip = true;
|
||||
|
||||
meta = {
|
||||
homepage = "https://gitlab.pm.bsc.es/rarias/bench6";
|
||||
description = "Set of micro-benchmarks for OmpSs-2 and several mini-apps";
|
||||
maintainers = with lib.maintainers.bsc; [ rarias ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.gpl3Plus;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,6 +1,5 @@
|
||||
{
|
||||
stdenv
|
||||
, lib
|
||||
, fetchFromGitHub
|
||||
, cmake
|
||||
}:
|
||||
@@ -15,12 +14,4 @@ stdenv.mkDerivation {
|
||||
sha256 = "sha256-ktxM3pXiL8YXSK+/IKWYadijhYXqGoLY6adLk36iigE=";
|
||||
};
|
||||
nativeBuildInputs = [ cmake ];
|
||||
|
||||
meta = {
|
||||
homepage = "https://github.com/rodarima/bigotes";
|
||||
description = "Versatile benchmark tool";
|
||||
maintainers = with lib.maintainers.bsc; [ rarias ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.gpl3Plus;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,6 +1,5 @@
|
||||
{
|
||||
stdenv
|
||||
, lib
|
||||
, cudatoolkit
|
||||
, cudaPackages
|
||||
, autoAddDriverRunpath
|
||||
@@ -12,7 +11,7 @@ stdenv.mkDerivation (finalAttrs: {
|
||||
src = ./.;
|
||||
buildInputs = [
|
||||
cudatoolkit # Required for nvcc
|
||||
(lib.getOutput "static" cudaPackages.cuda_cudart) # Required for -lcudart_static
|
||||
cudaPackages.cuda_cudart.static # Required for -lcudart_static
|
||||
autoAddDriverRunpath
|
||||
];
|
||||
installPhase = ''
|
||||
@@ -41,9 +40,4 @@ stdenv.mkDerivation (finalAttrs: {
|
||||
'';
|
||||
installPhase = "touch $out";
|
||||
};
|
||||
|
||||
meta = {
|
||||
platforms = [ "x86_64-linux" ];
|
||||
maintainers = with lib.maintainers.bsc; [ rarias ];
|
||||
};
|
||||
})
|
||||
|
||||
@@ -111,13 +111,4 @@ stdenv.mkDerivation rec {
|
||||
# then [ "--enable-openmp" ]
|
||||
# else []
|
||||
# );
|
||||
|
||||
meta = {
|
||||
homepage = "https://github.com/bsc-performance-tools/extrae";
|
||||
description = "Instrumentation framework to generate execution traces of the most used parallel runtimes";
|
||||
maintainers = [ ];
|
||||
broken = true;
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.lgpl21Plus;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,6 +1,5 @@
|
||||
{
|
||||
stdenv
|
||||
, lib
|
||||
, fetchurl
|
||||
, symlinkJoin
|
||||
, slurm
|
||||
@@ -9,6 +8,7 @@
|
||||
, automake
|
||||
, libtool
|
||||
, mpi
|
||||
, rsync
|
||||
, gfortran
|
||||
}:
|
||||
|
||||
@@ -43,33 +43,13 @@ stdenv.mkDerivation rec {
|
||||
|
||||
configureFlags = [
|
||||
"--with-infiniband=${rdma-core-all}"
|
||||
"--with-mpi=yes" # fixes mpi detection when cross-compiling
|
||||
"--with-mpi=${mpiAll}"
|
||||
"--with-slurm"
|
||||
"CFLAGS=-fPIC"
|
||||
"CXXFLAGS=-fPIC"
|
||||
];
|
||||
|
||||
nativeBuildInputs = [
|
||||
autoconf
|
||||
automake
|
||||
gfortran
|
||||
libtool
|
||||
];
|
||||
|
||||
buildInputs = [
|
||||
slurm
|
||||
mpiAll
|
||||
rdma-core-all
|
||||
];
|
||||
buildInputs = [ slurm mpiAll rdma-core-all autoconf automake libtool rsync gfortran ];
|
||||
|
||||
hardeningDisable = [ "all" ];
|
||||
|
||||
meta = {
|
||||
homepage = "https://pm.bsc.es/gitlab/interoperability/extern/GPI-2";
|
||||
description = "GPI-2 extended for supporting Task-Aware GASPI (TAGASPI) library";
|
||||
maintainers = with lib.maintainers.bsc; [ rarias ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.gpl3Plus;
|
||||
cross = false; # infiniband detection does not work
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,190 +0,0 @@
|
||||
{
|
||||
lib,
|
||||
stdenv,
|
||||
fetchurl,
|
||||
cmake,
|
||||
hwloc,
|
||||
fftw,
|
||||
perl,
|
||||
blas,
|
||||
lapack,
|
||||
llvmPackages,
|
||||
intelPackages ? null,
|
||||
mpi,
|
||||
cudaPackages,
|
||||
plumed,
|
||||
singlePrec ? true,
|
||||
config,
|
||||
enableSYCL ? false,
|
||||
enableCuda ? config.cudaSupport,
|
||||
enableMpi ? false,
|
||||
enablePlumed ? false,
|
||||
cpuAcceleration ? null,
|
||||
}:
|
||||
|
||||
# CUDA is only implemented for single precission
|
||||
assert enableCuda -> singlePrec;
|
||||
|
||||
assert !(enableSYCL && enableCuda);
|
||||
|
||||
assert enableSYCL -> intelPackages != null;
|
||||
|
||||
let
|
||||
inherit (cudaPackages.flags) cmakeCudaArchitecturesString;
|
||||
|
||||
# Select reasonable defaults for all major platforms
|
||||
# The possible values are defined in CMakeLists.txt:
|
||||
# AUTO None SSE2 SSE4.1 AVX_128_FMA AVX_256 AVX2_256
|
||||
# AVX2_128 AVX_512 AVX_512_KNL MIC ARM_NEON ARM_NEON_ASIMD
|
||||
SIMD =
|
||||
x:
|
||||
if (cpuAcceleration != null) then
|
||||
x
|
||||
else if stdenv.hostPlatform.system == "i686-linux" then
|
||||
"SSE2"
|
||||
else if stdenv.hostPlatform.system == "x86_64-linux" then
|
||||
"SSE4.1"
|
||||
else if stdenv.hostPlatform.system == "x86_64-darwin" then
|
||||
"SSE4.1"
|
||||
else if stdenv.hostPlatform.system == "aarch64-linux" then
|
||||
"ARM_NEON_ASIMD"
|
||||
else
|
||||
"None";
|
||||
|
||||
source =
|
||||
if enablePlumed then
|
||||
{
|
||||
version = "2024.2";
|
||||
hash = "sha256-gCp+M18uiVdw9XsVnk7DaOuw/yzm2sz3BsboAlw2hSs=";
|
||||
}
|
||||
else
|
||||
{
|
||||
version = "2025.3";
|
||||
hash = "sha256-i9/KAmjz8Qp8o8BuWbYvc+oCQgxnIRwP85EvMteDPGU=";
|
||||
};
|
||||
|
||||
stdenv' = if enableSYCL then intelPackages.stdenv else stdenv;
|
||||
|
||||
in
|
||||
stdenv'.mkDerivation rec {
|
||||
pname = "gromacs";
|
||||
version = source.version;
|
||||
|
||||
src = fetchurl {
|
||||
url = "ftp://ftp.gromacs.org/pub/gromacs/gromacs-${version}.tar.gz";
|
||||
inherit (source) hash;
|
||||
};
|
||||
|
||||
patches = [ (if enablePlumed then ./pkgconfig-2024.patch else ./pkgconfig-2025.patch) ];
|
||||
|
||||
postPatch = lib.optionalString enablePlumed ''
|
||||
plumed patch -p -e gromacs-${source.version}
|
||||
'';
|
||||
|
||||
outputs = [
|
||||
"out"
|
||||
"dev"
|
||||
"man"
|
||||
];
|
||||
|
||||
nativeBuildInputs = [
|
||||
cmake
|
||||
]
|
||||
++ lib.optional enablePlumed plumed
|
||||
++ lib.optionals enableCuda [ cudaPackages.cuda_nvcc ];
|
||||
|
||||
env.MKLROOT = intelPackages.mkl;
|
||||
|
||||
buildInputs = [
|
||||
fftw
|
||||
perl
|
||||
hwloc
|
||||
blas
|
||||
lapack
|
||||
]
|
||||
++ lib.optional enableMpi mpi
|
||||
++ lib.optionals enableCuda [
|
||||
cudaPackages.cuda_cccl
|
||||
cudaPackages.cuda_cudart
|
||||
cudaPackages.libcufft
|
||||
cudaPackages.cuda_profiler_api
|
||||
]
|
||||
++ lib.optional stdenv.hostPlatform.isDarwin llvmPackages.openmp;
|
||||
|
||||
propagatedBuildInputs = lib.optional enableMpi mpi;
|
||||
propagatedUserEnvPkgs = lib.optional enableMpi mpi;
|
||||
|
||||
cmakeFlags = [
|
||||
(lib.cmakeBool "GMX_HWLOC" true)
|
||||
"-DGMX_SIMD:STRING=${SIMD cpuAcceleration}"
|
||||
"-DGMX_OPENMP:BOOL=TRUE"
|
||||
"-DBUILD_SHARED_LIBS=ON"
|
||||
]
|
||||
++ (
|
||||
if singlePrec then
|
||||
[
|
||||
"-DGMX_DOUBLE=OFF"
|
||||
]
|
||||
else
|
||||
[
|
||||
"-DGMX_DOUBLE=ON"
|
||||
"-DGMX_DEFAULT_SUFFIX=OFF"
|
||||
]
|
||||
)
|
||||
++ (
|
||||
if enableMpi then
|
||||
[
|
||||
"-DGMX_MPI:BOOL=TRUE"
|
||||
"-DGMX_THREAD_MPI:BOOL=FALSE"
|
||||
]
|
||||
else
|
||||
[
|
||||
"-DGMX_MPI:BOOL=FALSE"
|
||||
]
|
||||
)
|
||||
++ (lib.optionals enableSYCL [
|
||||
"-DGMX_GPU=SYCL"
|
||||
"-DGMX_OPENMP=OFF" # TODO: enable OpenMP with SYCL?
|
||||
])
|
||||
++ lib.optionals enableCuda [
|
||||
"-DGMX_GPU=CUDA"
|
||||
(lib.cmakeFeature "CMAKE_CUDA_ARCHITECTURES" cmakeCudaArchitecturesString)
|
||||
|
||||
# Gromacs seems to ignore and override the normal variables, so we add this ad hoc:
|
||||
(lib.cmakeFeature "GMX_CUDA_TARGET_COMPUTE" cmakeCudaArchitecturesString)
|
||||
];
|
||||
|
||||
postInstall = ''
|
||||
moveToOutput share/cmake $dev
|
||||
'';
|
||||
|
||||
meta = with lib; {
|
||||
homepage = "https://www.gromacs.org";
|
||||
license = licenses.lgpl21Plus;
|
||||
description = "Molecular dynamics software package";
|
||||
longDescription = ''
|
||||
GROMACS is a versatile package to perform molecular dynamics,
|
||||
i.e. simulate the Newtonian equations of motion for systems
|
||||
with hundreds to millions of particles.
|
||||
|
||||
It is primarily designed for biochemical molecules like
|
||||
proteins, lipids and nucleic acids that have a lot of
|
||||
complicated bonded interactions, but since GROMACS is
|
||||
extremely fast at calculating the nonbonded interactions (that
|
||||
usually dominate simulations) many groups are also using it
|
||||
for research on non-biological systems, e.g. polymers.
|
||||
|
||||
GROMACS supports all the usual algorithms you expect from a
|
||||
modern molecular dynamics implementation, (check the online
|
||||
reference or manual for details), but there are also quite a
|
||||
few features that make it stand out from the competition.
|
||||
|
||||
See: https://www.gromacs.org/about.html for details.
|
||||
'';
|
||||
platforms = platforms.unix;
|
||||
maintainers = with maintainers; [
|
||||
sheepforce
|
||||
markuskowa
|
||||
];
|
||||
};
|
||||
}
|
||||
@@ -1,24 +0,0 @@
|
||||
diff --git a/src/external/muparser/muparser.pc.in b/src/external/muparser/muparser.pc.in
|
||||
index 646787cb53..9b97ad57f7 100644
|
||||
--- a/src/external/muparser/muparser.pc.in
|
||||
+++ b/src/external/muparser/muparser.pc.in
|
||||
@@ -1,7 +1,5 @@
|
||||
-prefix=@CMAKE_INSTALL_PREFIX@
|
||||
-exec_prefix=${prefix}
|
||||
-libdir=${prefix}/@CMAKE_INSTALL_LIBDIR@
|
||||
-includedir=${prefix}/@CMAKE_INSTALL_INCLUDEDIR@
|
||||
+libdir=@CMAKE_INSTALL_FULL_LIBDIR@
|
||||
+includedir=@CMAKE_INSTALL_FULL_INCLUDEDIR@
|
||||
|
||||
Name: @PACKAGE_NAME@
|
||||
Description: Mathematical expressions parser library
|
||||
diff --git a/src/gromacs/libgromacs.pc.cmakein b/src/gromacs/libgromacs.pc.cmakein
|
||||
index ec1ed6684e..ca1105474a 100644
|
||||
--- a/src/gromacs/libgromacs.pc.cmakein
|
||||
+++ b/src/gromacs/libgromacs.pc.cmakein
|
||||
@@ -1,4 +1,4 @@
|
||||
-libdir=@CMAKE_INSTALL_PREFIX@/@CMAKE_INSTALL_LIBDIR@
|
||||
+libdir=@CMAKE_INSTALL_FULL_LIBDIR@
|
||||
|
||||
Name: libgromacs@GMX_LIBS_SUFFIX@
|
||||
Description: Gromacs library
|
||||
@@ -1,36 +0,0 @@
|
||||
diff --git a/src/external/muparser/muparser.pc.in b/src/external/muparser/muparser.pc.in
|
||||
index 646787cb53..d26e84de8f 100644
|
||||
--- a/src/external/muparser/muparser.pc.in
|
||||
+++ b/src/external/muparser/muparser.pc.in
|
||||
@@ -1,11 +1,9 @@
|
||||
-prefix=@CMAKE_INSTALL_PREFIX@
|
||||
-exec_prefix=${prefix}
|
||||
-libdir=${prefix}/@CMAKE_INSTALL_LIBDIR@
|
||||
-includedir=${prefix}/@CMAKE_INSTALL_INCLUDEDIR@
|
||||
-
|
||||
-Name: @PACKAGE_NAME@
|
||||
-Description: Mathematical expressions parser library
|
||||
-Version: @MUPARSER_VERSION@
|
||||
-Requires:
|
||||
-Libs: -L${libdir} -lmuparser
|
||||
-Cflags: -I${includedir} @PKG_CONFIG_FLAGS@
|
||||
+libdir=@CMAKE_INSTALL_FULL_LIBDIR@
|
||||
+includedir=@CMAKE_INSTALL_FULL_INCLUDEDIR@
|
||||
+
|
||||
+Name: @PACKAGE_NAME@
|
||||
+Description: Mathematical expressions parser library
|
||||
+Version: @MUPARSER_VERSION@
|
||||
+Requires:
|
||||
+Libs: -L${libdir} -lmuparser
|
||||
+Cflags: -I${includedir} @PKG_CONFIG_FLAGS@
|
||||
diff --git a/src/gromacs/libgromacs.pc.cmakein b/src/gromacs/libgromacs.pc.cmakein
|
||||
index af9b5a6dc0..5f58d549bf 100644
|
||||
--- a/src/gromacs/libgromacs.pc.cmakein
|
||||
+++ b/src/gromacs/libgromacs.pc.cmakein
|
||||
@@ -1,5 +1,4 @@
|
||||
-prefix=@CMAKE_INSTALL_PREFIX@
|
||||
-libdir=${prefix}/@CMAKE_INSTALL_LIBDIR@
|
||||
+libdir=@CMAKE_INSTALL_FULL_LIBDIR@
|
||||
|
||||
Name: libgromacs@GMX_LIBS_SUFFIX@
|
||||
Description: Gromacs library
|
||||
@@ -1,5 +1,4 @@
|
||||
{ stdenv
|
||||
, lib
|
||||
, fetchurl
|
||||
, rpmextract
|
||||
, autoPatchelfHook
|
||||
@@ -60,12 +59,4 @@ stdenv.mkDerivation rec {
|
||||
rm $out/lib/*.dbg
|
||||
popd
|
||||
'';
|
||||
|
||||
meta = {
|
||||
homepage = "https://www.intel.com/content/www/us/en/developer/tools/overview.html";
|
||||
description = "Intel compiler";
|
||||
maintainers = with lib.maintainers.bsc; [ rarias ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.unfree;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -145,12 +145,4 @@ in
|
||||
popd
|
||||
'';
|
||||
|
||||
meta = {
|
||||
homepage = "https://www.intel.com/content/www/us/en/developer/tools/overview.html";
|
||||
description = "Intel compiler";
|
||||
maintainers = with lib.maintainers.bsc; [ rarias ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.unfree;
|
||||
};
|
||||
|
||||
}
|
||||
|
||||
@@ -1,5 +1,4 @@
|
||||
{ stdenv
|
||||
, lib
|
||||
, rpmextract
|
||||
, gcc
|
||||
, zlib
|
||||
@@ -102,12 +101,4 @@ stdenv.mkDerivation rec {
|
||||
patchelf --set-rpath "$out/lib:${rdma-core}/lib:${libpsm2}/lib" $out/lib/libfabric.so
|
||||
echo "Patched RPATH in libfabric.so to: $(patchelf --print-rpath $out/lib/libfabric.so)"
|
||||
'';
|
||||
|
||||
meta = {
|
||||
homepage = "https://www.intel.com/content/www/us/en/developer/tools/overview.html";
|
||||
description = "Intel MPI";
|
||||
maintainers = with lib.maintainers.bsc; [ rarias ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.unfree;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -10,7 +10,7 @@
|
||||
, zlib
|
||||
, autoPatchelfHook
|
||||
, libfabric
|
||||
, gcc
|
||||
, gcc13
|
||||
, wrapCCWith
|
||||
}:
|
||||
|
||||
@@ -26,12 +26,7 @@
|
||||
|
||||
let
|
||||
|
||||
meta = {
|
||||
description = "Intel oneapi hpckit package component";
|
||||
homepage = "https://www.intel.com/content/www/us/en/developer/tools/oneapi/hpc-toolkit-download.html";
|
||||
license = lib.licenses.unfree;
|
||||
maintainers = with lib.maintainers.bsc; [ abonerib ];
|
||||
};
|
||||
gcc = gcc13;
|
||||
|
||||
v = {
|
||||
hpckit = "2023.1.0";
|
||||
@@ -40,19 +35,45 @@ let
|
||||
mpi = "2021.9.0";
|
||||
};
|
||||
|
||||
findMatch = name:
|
||||
let
|
||||
aptPackages = builtins.fromJSON (builtins.readFile ./packages.json);
|
||||
matches = lib.filter (x: name == x.pname) aptPackages;
|
||||
n = lib.length matches;
|
||||
match = builtins.traceVerbose (name + " -- ${builtins.toString n}") (builtins.head matches);
|
||||
aptPackageIndex = stdenv.mkDerivation {
|
||||
name = "intel-oneapi-packages";
|
||||
srcs = [
|
||||
# Run update.sh to update the package lists
|
||||
./amd64-packages ./all-packages
|
||||
];
|
||||
phases = [ "installPhase" ];
|
||||
installPhase = ''
|
||||
awk -F': ' '\
|
||||
BEGIN { print "[ {" } \
|
||||
NR>1 && /^Package: / { print "} {"; } \
|
||||
/: / { printf "%s = \"%s\";\n", $1, $2 } \
|
||||
END { print "} ]" }' $srcs > $out
|
||||
'';
|
||||
};
|
||||
|
||||
apthost = "https://apt.repos.intel.com/oneapi/";
|
||||
aptPackages = import aptPackageIndex;
|
||||
|
||||
apthost = "https://apt.repos.intel.com/oneapi/";
|
||||
|
||||
getSum = pkgList: name:
|
||||
let
|
||||
matches = lib.filter (x: name == x.Package) pkgList;
|
||||
#n = lib.length matches;
|
||||
#match = builtins.trace (name + " -- ${builtins.toString n}") (lib.elemAt matches 0);
|
||||
match = lib.elemAt matches 0;
|
||||
in
|
||||
{
|
||||
url = apthost + match.filename;
|
||||
sha256 = match.sha256;
|
||||
};
|
||||
match.SHA256;
|
||||
|
||||
getUrl = pkgList: name:
|
||||
let
|
||||
matches = lib.filter (x: name == x.Package) pkgList;
|
||||
#match = assert lib.length matches == 1; lib.elemAt matches 0;
|
||||
n = lib.length matches;
|
||||
match =
|
||||
#builtins.trace (name + " -- n=${builtins.toString n}")
|
||||
(lib.elemAt matches 0);
|
||||
in
|
||||
apthost + match.Filename;
|
||||
|
||||
uncompressDebs = debs: name: stdenv.mkDerivation {
|
||||
name = name;
|
||||
@@ -66,13 +87,14 @@ let
|
||||
dpkg -x $src $out
|
||||
done
|
||||
'';
|
||||
|
||||
inherit meta;
|
||||
};
|
||||
|
||||
joinDebs = name: names:
|
||||
let
|
||||
debs = builtins.map (x: builtins.fetchurl (findMatch x)) names;
|
||||
urls = builtins.map (x: getUrl aptPackages x) names;
|
||||
sums = builtins.map (x: getSum aptPackages x) names;
|
||||
getsrc = url: sha256: builtins.fetchurl { inherit url sha256; };
|
||||
debs = lib.zipListsWith getsrc urls sums;
|
||||
in
|
||||
uncompressDebs debs "${name}-source";
|
||||
|
||||
@@ -123,8 +145,6 @@ let
|
||||
sed -i "s:I_MPI_SUBSTITUTE_INSTALLDIR:$out:g" "$i"
|
||||
done
|
||||
'';
|
||||
|
||||
inherit meta;
|
||||
};
|
||||
|
||||
intel-tbb = stdenv.mkDerivation rec {
|
||||
@@ -163,8 +183,6 @@ let
|
||||
rsync -a lib/intel64/gcc4.8/ $out/lib/
|
||||
popd
|
||||
'';
|
||||
|
||||
inherit meta;
|
||||
};
|
||||
|
||||
intel-compiler-shared = stdenv.mkDerivation rec {
|
||||
@@ -222,8 +240,6 @@ let
|
||||
popd
|
||||
popd
|
||||
'';
|
||||
|
||||
inherit meta;
|
||||
};
|
||||
|
||||
|
||||
@@ -289,8 +305,6 @@ let
|
||||
ln -s $out/lib $out/lib_lin
|
||||
popd
|
||||
'';
|
||||
|
||||
inherit meta;
|
||||
};
|
||||
|
||||
intel-compiler = stdenv.mkDerivation rec {
|
||||
@@ -378,8 +392,6 @@ let
|
||||
rsync -a documentation/en/man/common/ $out/share/man/
|
||||
popd
|
||||
'';
|
||||
|
||||
inherit meta;
|
||||
};
|
||||
|
||||
wrapIntel = { cc, mygcc, extraBuild ? "", extraInstall ? "" }:
|
||||
@@ -441,7 +453,7 @@ let
|
||||
'';
|
||||
};
|
||||
|
||||
ifort-wrapper = wrapIntel {
|
||||
ifort-wrapper = wrapIntel rec {
|
||||
cc = intel-compiler-fortran;
|
||||
mygcc = gcc;
|
||||
extraBuild = ''
|
||||
|
||||
8769
pkgs/intel-oneapi/all-packages
Normal file
8769
pkgs/intel-oneapi/all-packages
Normal file
File diff suppressed because it is too large
Load Diff
34075
pkgs/intel-oneapi/amd64-packages
Normal file
34075
pkgs/intel-oneapi/amd64-packages
Normal file
File diff suppressed because it is too large
Load Diff
File diff suppressed because one or more lines are too long
@@ -1,297 +0,0 @@
|
||||
{
|
||||
lib,
|
||||
stdenv,
|
||||
callPackage,
|
||||
dpkg,
|
||||
fetchurl,
|
||||
|
||||
sqlite,
|
||||
elfutils,
|
||||
}:
|
||||
|
||||
let
|
||||
inherit (builtins)
|
||||
attrNames
|
||||
attrValues
|
||||
concatMap
|
||||
elem
|
||||
filter
|
||||
fromJSON
|
||||
getAttr
|
||||
groupBy
|
||||
head
|
||||
isNull
|
||||
listToAttrs
|
||||
map
|
||||
mapAttrs
|
||||
readFile
|
||||
replaceStrings
|
||||
splitVersion
|
||||
;
|
||||
inherit (lib)
|
||||
converge
|
||||
findFirst
|
||||
groupBy'
|
||||
hasPrefix
|
||||
optional
|
||||
pipe
|
||||
take
|
||||
toInt
|
||||
toList
|
||||
versionAtLeast
|
||||
versionOlder
|
||||
;
|
||||
|
||||
aptData = fromJSON (readFile ./packages.json);
|
||||
|
||||
# Compare versions in debian control file syntax
|
||||
# See: https://www.debian.org/doc/debian-policy/ch-relationships.html#syntax-of-relationship-fields
|
||||
#
|
||||
# NOTE: this is not a proper version comparison
|
||||
#
|
||||
# A proper version solver, should aggregate dependencies with the same name
|
||||
# and compute the constraint (e.g. a (>= 2) a (<< 5) -> 2 <= a << 5)
|
||||
#
|
||||
# But in the intel repo, there are no such "duplicated" dependencies to specify
|
||||
# upper limits, which leads to issues when intel-hpckit-2021 depends on things
|
||||
# like intel-basekit >= 2021.1.0-2403 and we end up installing the newest
|
||||
# basekit instead of the one from 2021.
|
||||
#
|
||||
# To mitigate this, >= is set to take the latest version with matching major
|
||||
# and minor (only revision and patch are allowed to change)
|
||||
compareVersions =
|
||||
got: kind: want:
|
||||
let
|
||||
g0 = take 2 (splitVersion got);
|
||||
w0 = take 2 (splitVersion want);
|
||||
in
|
||||
if isNull want then
|
||||
true
|
||||
else if kind == "=" then
|
||||
got == want
|
||||
else if kind == "<<" then
|
||||
versionOlder got want
|
||||
else if kind == "<=" then
|
||||
versionAtLeast want got
|
||||
else if kind == ">>" then
|
||||
versionOlder want got
|
||||
else if kind == ">=" then
|
||||
(g0 == w0) && versionAtLeast got want # always match major version
|
||||
else
|
||||
throw "unknown operation: ${kind}";
|
||||
|
||||
findMatching =
|
||||
{
|
||||
pname,
|
||||
kind,
|
||||
version,
|
||||
}:
|
||||
findFirst (x: pname == x.pname && compareVersions x.version kind version) null aptData;
|
||||
|
||||
isIntel = pkg: (hasPrefix "intel-" pkg.pname);
|
||||
|
||||
expandDeps =
|
||||
pkg: (map findMatching (filter isIntel pkg.dependencies)) ++ (optional (pkg.size != 0) pkg);
|
||||
|
||||
# get the oldest by major version. If they have the same major version, take
|
||||
# the newest. This prevents most issues with resolutions
|
||||
# versionOlder b a -> true if b is older than a (b `older` a)
|
||||
getNewerInMajor =
|
||||
a: b:
|
||||
let
|
||||
va = a.version;
|
||||
vb = b.version;
|
||||
va0 = head (splitVersion va);
|
||||
vb0 = head (splitVersion vb);
|
||||
in
|
||||
if isNull a then
|
||||
b
|
||||
else if va0 != vb0 then
|
||||
if va0 > vb0 then b else a
|
||||
else if versionOlder vb va then
|
||||
a
|
||||
else
|
||||
b;
|
||||
removeDups = l: attrValues (groupBy' getNewerInMajor null (getAttr "provides") l);
|
||||
|
||||
_resolveDeps = converge (l: removeDups (concatMap expandDeps l));
|
||||
resolveDeps =
|
||||
pkg:
|
||||
let
|
||||
deps = _resolveDeps (toList pkg);
|
||||
namedDeps = (map (x: "${x.pname}-${x.version}") deps);
|
||||
in
|
||||
builtins.traceVerbose (builtins.deepSeq namedDeps namedDeps) deps;
|
||||
|
||||
blacklist = [
|
||||
"intel-basekit-env"
|
||||
"intel-basekit-getting-started"
|
||||
"intel-hpckit-env"
|
||||
"intel-hpckit-getting-started"
|
||||
"intel-oneapi-advisor"
|
||||
"intel-oneapi-common-licensing"
|
||||
"intel-oneapi-common-oneapi-vars"
|
||||
"intel-oneapi-common-vars"
|
||||
"intel-oneapi-compiler-cpp-eclipse-cfg"
|
||||
"intel-oneapi-compiler-dpcpp-eclipse-cfg"
|
||||
"intel-oneapi-condaindex"
|
||||
"intel-oneapi-dev-utilities-eclipse-cfg"
|
||||
"intel-oneapi-dpcpp-ct-eclipse-cfg"
|
||||
"intel-oneapi-eclipse-ide"
|
||||
"intel-oneapi-hpc-toolkit-getting-started"
|
||||
"intel-oneapi-icc-eclipse-plugin-cpp"
|
||||
"intel-oneapi-vtune"
|
||||
"intel-oneapi-vtune-eclipse-plugin-vtune"
|
||||
];
|
||||
|
||||
isInBlacklist = pkg: elem pkg.provides blacklist;
|
||||
removeBlacklist = filter (e: !(isInBlacklist e));
|
||||
|
||||
dpkgExtractAll =
|
||||
pname: version:
|
||||
{ srcs, deps }:
|
||||
stdenv.mkDerivation {
|
||||
inherit pname version srcs;
|
||||
|
||||
nativeBuildInputs = [ dpkg ];
|
||||
phases = [ "installPhase" ];
|
||||
|
||||
passthru = { inherit deps; };
|
||||
|
||||
installPhase = ''
|
||||
mkdir -p $out
|
||||
for src in $srcs; do
|
||||
echo "Unpacking $src"
|
||||
dpkg -x $src $out
|
||||
done
|
||||
'';
|
||||
};
|
||||
|
||||
apthost = "https://apt.repos.intel.com/oneapi/";
|
||||
fetchDeb =
|
||||
p:
|
||||
fetchurl {
|
||||
url = apthost + p.filename;
|
||||
inherit (p) sha256;
|
||||
};
|
||||
|
||||
buildIntel =
|
||||
pkg:
|
||||
pipe pkg [
|
||||
resolveDeps
|
||||
removeBlacklist
|
||||
(l: {
|
||||
srcs = map fetchDeb l;
|
||||
deps = l;
|
||||
})
|
||||
(dpkgExtractAll "${pkg.provides}-extracted" pkg.version)
|
||||
];
|
||||
|
||||
findHpcKit =
|
||||
year:
|
||||
findMatching {
|
||||
pname = "intel-hpckit";
|
||||
kind = "<<";
|
||||
version = toString (year + 1);
|
||||
};
|
||||
years = map toInt (attrNames components);
|
||||
|
||||
patchIntel = callPackage ./patch_intel.nix { };
|
||||
|
||||
# Version information for each hpckit. This is used to normalize the paths
|
||||
# so that files are in $out/{bin,lib,include...} instead of all over the place
|
||||
# in $out/opt/intel/oneapi/*/*/{...}.
|
||||
#
|
||||
# The most important is the compiler component, which is used to build the
|
||||
# stdenv for the hpckit.
|
||||
#
|
||||
# NOTE: this have to be manually specified, so we can avoid IFD. To add a
|
||||
# new version, add a new field with an empty attrset, (e.g. "2026" = {}; ),
|
||||
# build hpckit_2026.unpatched and use the values from
|
||||
# result/opt/intel/oneapi/* to populate the attrset.
|
||||
#
|
||||
# WARN: if there are more than one version in the folders of the unpatched
|
||||
# components, our dependency resolution hacks have probably failed and the
|
||||
# package set may be broken.
|
||||
components = {
|
||||
"2025" = {
|
||||
ishmem = "1.4";
|
||||
pti = "0.13";
|
||||
tcm = "1.4";
|
||||
umf = "0.11";
|
||||
|
||||
ccl = "2021.16";
|
||||
compiler = "2025.2";
|
||||
dal = "2025.8";
|
||||
debugger = "2025.2";
|
||||
dev-utilities = "2025.2";
|
||||
dnnl = "2025.2";
|
||||
dpcpp-ct = "2025.2";
|
||||
dpl = "2022.9";
|
||||
ipp = "2022.2";
|
||||
ippcp = "2025.2";
|
||||
mkl = "2025.2";
|
||||
mpi = "2021.16";
|
||||
tbb = "2022.2";
|
||||
};
|
||||
"2024" = {
|
||||
tcm = "1.1";
|
||||
|
||||
ccl = "2021.13";
|
||||
compiler = "2024.2";
|
||||
dal = "2024.6";
|
||||
debugger = "2024.2";
|
||||
dev-utilities = "2024.2";
|
||||
diagnostics = "2024.2";
|
||||
dnnl = "2024.2";
|
||||
dpcpp-ct = "2024.2";
|
||||
dpl = "2022.6";
|
||||
ipp = "2021.12";
|
||||
ippcp = "2021.12";
|
||||
mkl = "2024.2";
|
||||
mpi = "2021.13";
|
||||
tbb = "2021.13";
|
||||
|
||||
extraPackages = [
|
||||
sqlite
|
||||
elfutils
|
||||
];
|
||||
};
|
||||
};
|
||||
|
||||
replaceDots = replaceStrings [ "." ] [ "_" ];
|
||||
|
||||
in
|
||||
lib.recurseIntoAttrs (
|
||||
listToAttrs (
|
||||
map (
|
||||
year:
|
||||
let
|
||||
year_str = toString year;
|
||||
in
|
||||
{
|
||||
name = "hpckit_${year_str}";
|
||||
value = patchIntel {
|
||||
unpatched = buildIntel (findHpcKit year);
|
||||
components = components.${year_str};
|
||||
};
|
||||
}
|
||||
) years
|
||||
)
|
||||
)
|
||||
// {
|
||||
apt = pipe aptData [
|
||||
(groupBy (p: replaceDots p.provides))
|
||||
(mapAttrs (
|
||||
_: l:
|
||||
listToAttrs (
|
||||
map (pkg: {
|
||||
name = replaceDots ("v" + pkg.version);
|
||||
value = pkg;
|
||||
}) l
|
||||
)
|
||||
))
|
||||
];
|
||||
|
||||
inherit resolveDeps patchIntel buildIntel;
|
||||
}
|
||||
@@ -1,201 +0,0 @@
|
||||
{
|
||||
stdenv,
|
||||
stdenvNoCC,
|
||||
lib,
|
||||
symlinkJoin,
|
||||
autoPatchelfHook,
|
||||
wrapCCWith,
|
||||
overrideCC,
|
||||
gcc,
|
||||
hwloc,
|
||||
libelf,
|
||||
libgcc,
|
||||
libffi_3_3,
|
||||
libpsm2,
|
||||
libuuid,
|
||||
libxml2,
|
||||
numactl,
|
||||
ocl-icd,
|
||||
openssl,
|
||||
python3,
|
||||
rdma-core,
|
||||
ucx,
|
||||
zlib,
|
||||
writeTextFile,
|
||||
}:
|
||||
|
||||
lib.makeOverridable (
|
||||
{
|
||||
unpatched,
|
||||
components ? { },
|
||||
extraPackages ? components.extraPackages or [ ],
|
||||
}:
|
||||
|
||||
let
|
||||
inherit (builtins)
|
||||
attrValues
|
||||
filter
|
||||
mapAttrs
|
||||
removeAttrs
|
||||
;
|
||||
|
||||
__components = removeAttrs components [ "extraPackages" ];
|
||||
_components = __components;
|
||||
# _components = lib.traceSeqN 2 {
|
||||
# inherit unpatched __components;
|
||||
# deps = builtins.map (x: "${x.pname}-${x.version}") unpatched.deps;
|
||||
# } __components;
|
||||
|
||||
wrapIntel =
|
||||
cc:
|
||||
let
|
||||
targetConfig = stdenv.targetPlatform.config;
|
||||
in
|
||||
(wrapCCWith {
|
||||
inherit cc;
|
||||
|
||||
nixSupport = {
|
||||
cc-ldflags = [
|
||||
"-L${gcc.cc}/lib/gcc/${targetConfig}/${gcc.version}"
|
||||
"-L${gcc.cc.lib}/lib"
|
||||
"-L${libgcc.out}/lib"
|
||||
"-L${cc}/lib"
|
||||
];
|
||||
cc-cflags = [
|
||||
"--gcc-toolchain=${gcc.cc}"
|
||||
"-isystem \"${cc.original}/lib/clang/*/include\""
|
||||
"-isystem ${cc}/include"
|
||||
"-isystem ${cc}/include/intel64"
|
||||
"-isystem ${gcc.cc}/lib/gcc/${targetConfig}/${gcc.version}/include"
|
||||
];
|
||||
libcxx-cxxflags = [
|
||||
# "--gcc-toolchain=${gcc.cc}"
|
||||
"-isystem ${gcc.cc}/include/c++/${gcc.version}"
|
||||
"-isystem ${gcc.cc}/include/c++/${gcc.version}/${targetConfig}"
|
||||
];
|
||||
};
|
||||
|
||||
extraBuildCommands = ''
|
||||
# FIXME: We should find a better way to modify the PATH instead of using
|
||||
# this ugly hack. See https://jungle.bsc.es/git/rarias/bscpkgs/issues/9
|
||||
echo 'path_backup="${gcc.cc}/bin:$path_backup"' >>$out/nix-support/cc-wrapper-hook
|
||||
|
||||
# Disable hardening by default
|
||||
echo "" > $out/nix-support/add-hardening.sh
|
||||
|
||||
wrap icx $wrapper $ccPath/icx
|
||||
wrap icpx $wrapper $ccPath/icpx
|
||||
wrap ifx $wrapper $ccPath/ifx
|
||||
|
||||
ln -s $out/bin/icpx $out/bin/c++
|
||||
ln -s $out/bin/icx $out/bin/cc
|
||||
|
||||
ln -s $ccPath/sycl-ls $out/bin/sycl-ls
|
||||
ln -s $ccPath/sycl-trace $out/bin/sycl-trace
|
||||
|
||||
sed -i 's/.*isCxx=0/isCxx=1/' $out/bin/icpx
|
||||
|
||||
# Use this to detect when a compiler subprocess is called
|
||||
# from icpx (--fsycl-host-compiler)
|
||||
echo 'export NIX_CC_WRAPPER_INTEL=1' >>$out/nix-support/cc-wrapper-hook
|
||||
|
||||
# oneMath looks for sycl libraries in bin/../lib
|
||||
ln -s ${cc}/lib $out/lib
|
||||
ln -s ${cc}/include $out/include
|
||||
'';
|
||||
}).overrideAttrs
|
||||
(old: {
|
||||
installPhase = old.installPhase + ''
|
||||
export named_cc="icx"
|
||||
export named_cxx="icpx"
|
||||
export named_fc="ifx"
|
||||
'';
|
||||
});
|
||||
|
||||
in
|
||||
stdenvNoCC.mkDerivation (finalAttrs: {
|
||||
pname = lib.removeSuffix "-extracted" unpatched.pname;
|
||||
inherit (unpatched) version;
|
||||
src = unpatched;
|
||||
|
||||
phases = [
|
||||
"installPhase"
|
||||
"fixupPhase"
|
||||
];
|
||||
buildInputs = [
|
||||
libffi_3_3
|
||||
libelf
|
||||
libxml2
|
||||
hwloc
|
||||
numactl
|
||||
libuuid
|
||||
libpsm2
|
||||
zlib
|
||||
ocl-icd
|
||||
rdma-core
|
||||
ucx
|
||||
openssl
|
||||
python3
|
||||
stdenv.cc.cc.lib
|
||||
]
|
||||
++ extraPackages;
|
||||
|
||||
autoPatchelfIgnoreMissingDeps = [
|
||||
"libhwloc.so.5"
|
||||
"libcuda.so.1"
|
||||
"libze_loader.so.1"
|
||||
];
|
||||
|
||||
# There are broken symlinks that go outside packages, ignore them
|
||||
dontCheckForBrokenSymlinks = true;
|
||||
|
||||
nativeBuildInputs = [ autoPatchelfHook ];
|
||||
installPhase = ''
|
||||
cp -r $src/opt/intel/oneapi/ $out
|
||||
'';
|
||||
|
||||
passthru =
|
||||
let
|
||||
pkgs = mapAttrs (
|
||||
folder: version:
|
||||
let
|
||||
original = "${finalAttrs.finalPackage}/${folder}/${version}";
|
||||
|
||||
etc-vendors = writeTextFile {
|
||||
name = "intel-ocl-icd";
|
||||
text = "${original}/lib/libintelocl.so";
|
||||
destination = "/etc/OpenCL/vendors/intel.icd";
|
||||
};
|
||||
in
|
||||
symlinkJoin {
|
||||
pname = "intel-${folder}";
|
||||
inherit version;
|
||||
paths = [ original ] ++ lib.optionals (folder == "compiler") [ etc-vendors ];
|
||||
passthru = { inherit original; };
|
||||
}
|
||||
) _components;
|
||||
in
|
||||
pkgs
|
||||
// {
|
||||
inherit unpatched;
|
||||
pkgs = lib.recurseIntoAttrs pkgs;
|
||||
components = _components;
|
||||
|
||||
# This contains all packages properly symlinked into toplevel directories
|
||||
# in $out.
|
||||
#
|
||||
# NOTE: there are clashes with packages that have symlinks outside their
|
||||
# scope (libtcm and env/vars.sh)
|
||||
all = symlinkJoin {
|
||||
pname = finalAttrs.finalPackage.pname + "-symlinked";
|
||||
inherit (finalAttrs.finalPackage) version;
|
||||
paths = filter lib.isDerivation (attrValues finalAttrs.finalPackage.pkgs);
|
||||
};
|
||||
|
||||
stdenv = overrideCC stdenv finalAttrs.finalPackage.cc;
|
||||
|
||||
cc = wrapIntel finalAttrs.finalPackage.pkgs.compiler;
|
||||
};
|
||||
|
||||
})
|
||||
)
|
||||
@@ -1,29 +0,0 @@
|
||||
#!/usr/bin/env -S jq -f
|
||||
|
||||
def extract_fields: {
|
||||
pname : .Package,
|
||||
version : .Version,
|
||||
provides : .Package | sub("[0-9.-]*$"; ""),
|
||||
filename : .Filename,
|
||||
size : ."Installed-Size" | tonumber,
|
||||
sha256 : .SHA256,
|
||||
dependencies : .Depends,
|
||||
} ;
|
||||
|
||||
# parses dependencies into a list of [{.pname, .kind, .version}]
|
||||
# some dependencies do not have a version specified, in which case, kind = version = null
|
||||
#
|
||||
# example dependencies:
|
||||
# intel-oneapi-common-vars (>= 2023.0.0-25325), intel-oneapi-common-licensing-2023.0.0
|
||||
|
||||
def split_dependencies : map(try(.dependencies |= split(",\\s?"; "")) // .dependencies |= []) ;
|
||||
|
||||
def match_version : capture("(?<pname>[a-zA-Z0-9_\\-.]*) *(\\((?<kind>[<>=]*) *(?<version>.*)\\))?"; "") ;
|
||||
|
||||
def parse_dependencies : map_values(.dependencies.[] |= match_version) ;
|
||||
|
||||
def sort_version_decreasing : sort_by(.version | split("[-.]"; "") | map(tonumber)) | reverse ;
|
||||
|
||||
map(extract_fields) | split_dependencies | parse_dependencies | sort_version_decreasing
|
||||
|
||||
# [.[] | select(.pname == "intel-hpckit") | .version]
|
||||
@@ -1,29 +0,0 @@
|
||||
#!/usr/bin/env -S awk -f
|
||||
|
||||
BEGIN {
|
||||
FS=": "
|
||||
|
||||
prev_empty=1
|
||||
t=" "
|
||||
|
||||
print "[ {"
|
||||
}
|
||||
|
||||
!NF { # empty line, update separator so next non empty line closes the dict
|
||||
prev_empty=1
|
||||
t="},\n{ "
|
||||
next # skip line (we won't match anything else)
|
||||
}
|
||||
|
||||
{
|
||||
printf t "\"%s\" : \"%s\"\n", $1, $2
|
||||
|
||||
if (prev_empty) {
|
||||
# we were the first after a group of empty lines, following ones have to
|
||||
# have a comma
|
||||
prev_empty=0
|
||||
t=", "
|
||||
}
|
||||
}
|
||||
|
||||
END { print "} ]" }
|
||||
@@ -1,11 +1,4 @@
|
||||
#!/bin/sh
|
||||
|
||||
out_64=$(mktemp intel-api.64.XXXXXX)
|
||||
out_all=$(mktemp intel-api.all.XXXXXX)
|
||||
trap 'rm -f "$out_64" "$out_all"' EXIT INT HUP
|
||||
|
||||
curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-amd64/Packages -o "$out_64"
|
||||
curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-all/Packages -o "$out_all"
|
||||
|
||||
# NOTE: we use `jq -r tostring` to minify the json (3.2Mb -> 2.3Mb)
|
||||
cat "$out_64" "$out_all" | ./toJson.awk | ./process.jq | jq -r tostring >packages.json
|
||||
curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-amd64/Packages -o amd64-packages
|
||||
curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-all/Packages -o all-packages
|
||||
|
||||
@@ -1,243 +0,0 @@
|
||||
{
|
||||
stdenv,
|
||||
lib,
|
||||
ninja,
|
||||
autoAddDriverRunpath,
|
||||
wrapCC,
|
||||
cmake,
|
||||
emhash,
|
||||
fetchFromGitHub,
|
||||
khronos-ocl-icd-loader,
|
||||
libbacktrace,
|
||||
opencl-headers,
|
||||
parallel-hashmap,
|
||||
perl,
|
||||
pkg-config,
|
||||
python3,
|
||||
spirv-headers,
|
||||
spirv-tools,
|
||||
symlinkJoin,
|
||||
zlib,
|
||||
|
||||
cudaPackages,
|
||||
enableCuda ? true,
|
||||
}:
|
||||
|
||||
let
|
||||
|
||||
llvmMajorVersion = "21";
|
||||
version = "6.2.1";
|
||||
src = fetchFromGitHub {
|
||||
owner = "intel";
|
||||
repo = "llvm";
|
||||
tag = "v${version}";
|
||||
sha256 = "sha256-j8+DmGKO0qDF5JjH+DlkLKs1kBz6dS7ukwySd/Crqv0=";
|
||||
};
|
||||
|
||||
pinned = {
|
||||
inherit parallel-hashmap;
|
||||
|
||||
vc-intrinsics.src = fetchFromGitHub {
|
||||
owner = "intel";
|
||||
repo = "vc-intrinsics";
|
||||
rev = "4e51b2467104a257c22788e343dafbdde72e28bb";
|
||||
sha256 = "sha256-AHXeKbih4bzmcuu+tx2TeS7Ixmk54uS1vKFVxI6ZP8g=";
|
||||
};
|
||||
|
||||
unified-memory-framework.src = fetchFromGitHub {
|
||||
owner = "oneapi-src";
|
||||
repo = "unified-memory-framework";
|
||||
tag = "v0.11.0";
|
||||
sha256 = "sha256-k8QdP2u1QOoeCZ6ps4sM8+1iZq/H3q0lqCfVk8mz9KI=";
|
||||
};
|
||||
|
||||
ocl-headers = opencl-headers.overrideAttrs {
|
||||
version = "2024.10.24";
|
||||
src = fetchFromGitHub {
|
||||
owner = "KhronosGroup";
|
||||
repo = "OpenCL-Headers";
|
||||
tag = "v2024.10.24";
|
||||
sha256 = "sha256-KDlruE0IG8d+lAChxYyc6dg5XOvqCMrMyO69sdAzejA=";
|
||||
};
|
||||
};
|
||||
|
||||
ocl-icd = khronos-ocl-icd-loader;
|
||||
|
||||
spirv-headers = spirv-headers.overrideAttrs {
|
||||
version = "1.4.309.0";
|
||||
src = fetchFromGitHub {
|
||||
owner = "KhronosGroup";
|
||||
repo = "SPIRV-Headers";
|
||||
tag = "vulkan-sdk-1.4.309.0";
|
||||
sha256 = "sha256-Q1i6i5XimULuGufP6mimwDW674anAETUiIEvDQwvg5Y=";
|
||||
};
|
||||
};
|
||||
};
|
||||
|
||||
fetchcontent_cmakeFlags = lib.mapAttrsToList (
|
||||
name: value: (lib.cmakeFeature "FETCHCONTENT_SOURCE_DIR_${lib.toUpper name}" (toString value.src))
|
||||
) pinned;
|
||||
|
||||
# Hack to fix #include <emhash/...>
|
||||
emhash' = symlinkJoin {
|
||||
name = "emhash";
|
||||
paths = [ emhash ];
|
||||
postBuild = ''
|
||||
pushd $out/include
|
||||
ln -s . emhash
|
||||
popd
|
||||
'';
|
||||
};
|
||||
|
||||
in
|
||||
stdenv.mkDerivation {
|
||||
pname = "intel-llvm";
|
||||
inherit src version;
|
||||
|
||||
enableParallelBuilding = true;
|
||||
strictDeps = true;
|
||||
|
||||
nativeBuildInputs = [
|
||||
perl
|
||||
cmake
|
||||
ninja
|
||||
pkg-config
|
||||
python3
|
||||
spirv-tools
|
||||
autoAddDriverRunpath
|
||||
]
|
||||
++ lib.optionals enableCuda [
|
||||
cudaPackages.cuda_nvcc
|
||||
];
|
||||
|
||||
buildInputs = [
|
||||
emhash'
|
||||
libbacktrace
|
||||
zlib
|
||||
|
||||
pinned.ocl-icd
|
||||
pinned.ocl-headers
|
||||
pinned.spirv-headers
|
||||
]
|
||||
++ lib.optionals enableCuda [
|
||||
cudaPackages.cudatoolkit
|
||||
];
|
||||
|
||||
patches = [ ./fix-ur.patch ]; # Has been fixed in next release
|
||||
|
||||
preBuild = ''
|
||||
chmod -R u+w /build/source
|
||||
'';
|
||||
|
||||
cmakeDir = "../llvm";
|
||||
|
||||
cmakeFlags =
|
||||
let
|
||||
cmakeList = name: l: lib.cmakeOptionType "list" name (builtins.concatStringsSep ";" l);
|
||||
|
||||
LLVM_EXTERNAL_PROJECTS = [
|
||||
"sycl"
|
||||
"llvm-spirv"
|
||||
"opencl"
|
||||
"xpti"
|
||||
"xptifw"
|
||||
"compiler-rt"
|
||||
"sycl-jit"
|
||||
"libdevice"
|
||||
]
|
||||
++ lib.optionals enableCuda [
|
||||
"libclc"
|
||||
];
|
||||
in
|
||||
[
|
||||
(lib.cmakeBool "LLVM_ENABLE_ASSERTIONS" true)
|
||||
|
||||
(cmakeList "LLVM_TARGETS_TO_BUILD" (
|
||||
[
|
||||
"host"
|
||||
"SPIRV"
|
||||
]
|
||||
++ lib.optionals enableCuda [ "NVPTX" ]
|
||||
))
|
||||
(cmakeList "LLVM_EXTERNAL_PROJECTS" LLVM_EXTERNAL_PROJECTS)
|
||||
(cmakeList "LLVM_ENABLE_PROJECTS" ([ "clang" ] ++ LLVM_EXTERNAL_PROJECTS))
|
||||
|
||||
(lib.cmakeBool "UR_USE_EXTERNAL_UMF" false)
|
||||
(lib.cmakeOptionType "path" "UR_OPENCL_INCLUDE_DIR" (toString pinned.ocl-headers))
|
||||
(lib.cmakeOptionType "path" "UR_OPENCL_ICD_LOADER_LIBRARY" (toString pinned.ocl-icd))
|
||||
(lib.cmakeFeature "UR_OPENCL_ICD_LOADER_LIBRARY" (toString pinned.ocl-icd))
|
||||
|
||||
(lib.cmakeBool "BUILD_SHARED_LIBS" false)
|
||||
(lib.cmakeBool "LLVM_BUILD_TOOLS" true)
|
||||
(lib.cmakeBool "LLVM_ENABLE_ZSTD" true)
|
||||
(lib.cmakeBool "LLVM_USE_STATIC_ZSTD" true)
|
||||
(lib.cmakeBool "LLVM_ENABLE_DOXYGEN" false)
|
||||
(lib.cmakeBool "LLVM_ENABLE_LLD" false)
|
||||
(lib.cmakeBool "LLVM_ENABLE_SPHINX" false)
|
||||
(lib.cmakeBool "LLVM_SPIRV_ENABLE_LIBSPIRV_DIS" false)
|
||||
(lib.cmakeBool "SYCL_ENABLE_WERROR" false)
|
||||
(lib.cmakeBool "SYCL_INCLUDE_TESTS" false)
|
||||
(lib.cmakeBool "SYCL_ENABLE_EXTENSION_JIT" true)
|
||||
(lib.cmakeBool "SYCL_ENABLE_MAJOR_RELEASE_PREVIEW_LIB" false)
|
||||
(lib.cmakeBool "SYCL_ENABLE_XPTI_TRACING" true)
|
||||
(lib.cmakeBool "XPTI_ENABLE_WERROR" false)
|
||||
|
||||
(cmakeList "SYCL_ENABLE_BACKENDS" ([ "opencl" ] ++ lib.optionals enableCuda [ "cuda" ]))
|
||||
]
|
||||
++ fetchcontent_cmakeFlags
|
||||
++ lib.optionals enableCuda [
|
||||
(lib.cmakeOptionType "list" "LIBCLC_TARGETS_TO_BUILD" "nvptx64--nvidiacl")
|
||||
(lib.cmakeBool "LIBCLC_GENERATE_REMANGLED_VARIANTS" true)
|
||||
(lib.cmakeBool "LIBCLC_NATIVECPU_HOST_TARGET" false)
|
||||
];
|
||||
|
||||
hardeningDisable = lib.optionals enableCuda [ "zerocallusedregs" ]; # not supported for nvidia
|
||||
|
||||
postPatch =
|
||||
|
||||
let
|
||||
# See the postPatch phase for details on why this is used
|
||||
ccWrapperStub = wrapCC (
|
||||
stdenv.mkDerivation {
|
||||
name = "ccWrapperStub";
|
||||
dontUnpack = true;
|
||||
installPhase = ''
|
||||
mkdir -p $out/bin
|
||||
cat > $out/bin/clang-${llvmMajorVersion} <<'EOF'
|
||||
#!/bin/sh
|
||||
exec "$NIX_BUILD_TOP/source/build/bin/clang-${llvmMajorVersion}" "$@"
|
||||
EOF
|
||||
chmod +x $out/bin/clang-${llvmMajorVersion}
|
||||
cp $out/bin/clang-${llvmMajorVersion} $out/bin/clang
|
||||
cp $out/bin/clang-${llvmMajorVersion} $out/bin/clang++
|
||||
'';
|
||||
passthru.isClang = true;
|
||||
}
|
||||
);
|
||||
in
|
||||
''
|
||||
# Parts of libdevice are built using the freshly-built compiler.
|
||||
# As it tries to link to system libraries, we need to wrap it with the
|
||||
# usual nix cc-wrapper.
|
||||
# Since the compiler to be wrapped is not available at this point,
|
||||
# we use a stub that points to where it will be later on
|
||||
# in `$NIX_BUILD_TOP/source/build/bin/clang-${llvmMajorVersion}`
|
||||
substituteInPlace libdevice/cmake/modules/SYCLLibdevice.cmake \
|
||||
--replace-fail "\''${clang_exe}" "${ccWrapperStub}/bin/clang++"
|
||||
'';
|
||||
|
||||
passthru = {
|
||||
inherit llvmMajorVersion;
|
||||
};
|
||||
|
||||
meta = {
|
||||
homepage = "https://github.com/intel/llvm";
|
||||
description = "Intel staging area for llvm.org contribution";
|
||||
maintainers = with lib.maintainers.bsc; [ abonerib ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = [
|
||||
lib.licenses.asl20
|
||||
lib.licenses.llvm-exception
|
||||
];
|
||||
};
|
||||
}
|
||||
@@ -1,23 +0,0 @@
|
||||
diff --git a/unified-runtime/source/adapters/cuda/CMakeLists.txt b/unified-runtime/source/adapters/cuda/CMakeLists.txt
|
||||
index a8401c71a..2ab363926 100644
|
||||
--- a/unified-runtime/source/adapters/cuda/CMakeLists.txt
|
||||
+++ b/unified-runtime/source/adapters/cuda/CMakeLists.txt
|
||||
@@ -62,14 +62,14 @@ add_library(cudadrv SHARED IMPORTED GLOBAL)
|
||||
if (WIN32)
|
||||
set_target_properties(
|
||||
cudadrv PROPERTIES
|
||||
- IMPORTED_IMPLIB ${CUDA_cuda_driver_LIBRARY}
|
||||
- INTERFACE_INCLUDE_DIRECTORIES ${CUDAToolkit_INCLUDE_DIRS}
|
||||
+ IMPORTED_IMPLIB "${CUDA_cuda_driver_LIBRARY}"
|
||||
+ INTERFACE_INCLUDE_DIRECTORIES "${CUDAToolkit_INCLUDE_DIRS}"
|
||||
)
|
||||
else()
|
||||
set_target_properties(
|
||||
cudadrv PROPERTIES
|
||||
- IMPORTED_LOCATION ${CUDA_cuda_driver_LIBRARY}
|
||||
- INTERFACE_INCLUDE_DIRECTORIES ${CUDAToolkit_INCLUDE_DIRS}
|
||||
+ IMPORTED_LOCATION "${CUDA_cuda_driver_LIBRARY}"
|
||||
+ INTERFACE_INCLUDE_DIRECTORIES "${CUDAToolkit_INCLUDE_DIRS}"
|
||||
)
|
||||
endif()
|
||||
|
||||
@@ -1,60 +0,0 @@
|
||||
{
|
||||
stdenv,
|
||||
wrapCCWith,
|
||||
llvm-intel-unwrapped,
|
||||
gcc,
|
||||
libgcc,
|
||||
}:
|
||||
|
||||
let
|
||||
wrapIntel =
|
||||
cc:
|
||||
let
|
||||
targetConfig = stdenv.targetPlatform.config;
|
||||
in
|
||||
wrapCCWith {
|
||||
inherit cc;
|
||||
|
||||
nixSupport = {
|
||||
cc-ldflags = [
|
||||
"-L${gcc.cc}/lib/gcc/${targetConfig}/${gcc.version}"
|
||||
"-L${gcc.cc.lib}/lib"
|
||||
"-L${libgcc.out}/lib"
|
||||
"-L${cc}/lib"
|
||||
];
|
||||
cc-cflags = [
|
||||
"--gcc-toolchain=${gcc.cc}"
|
||||
"-isystem \"${cc}/lib/clang/${cc.llvmMajorVersion}/include\""
|
||||
"-isystem ${cc}/include"
|
||||
"-isystem ${cc}/include/intel64"
|
||||
"-isystem ${gcc.cc}/lib/gcc/${targetConfig}/${gcc.version}/include"
|
||||
];
|
||||
libcxx-cxxflags = [
|
||||
# "--gcc-toolchain=${gcc.cc}"
|
||||
"-isystem ${gcc.cc}/include/c++/${gcc.version}"
|
||||
"-isystem ${gcc.cc}/include/c++/${gcc.version}/${targetConfig}"
|
||||
];
|
||||
};
|
||||
|
||||
extraBuildCommands = ''
|
||||
# FIXME: We should find a better way to modify the PATH instead of using
|
||||
# this ugly hack. See https://jungle.bsc.es/git/rarias/bscpkgs/issues/9
|
||||
echo 'path_backup="${gcc.cc}/bin:$path_backup"' >>$out/nix-support/cc-wrapper-hook
|
||||
|
||||
# Disable hardening by default
|
||||
echo "" > $out/nix-support/add-hardening.sh
|
||||
|
||||
ln -s $ccPath/sycl-ls $out/bin/sycl-ls
|
||||
ln -s $ccPath/sycl-trace $out/bin/sycl-trace
|
||||
|
||||
# Use this to detect when a compiler subprocess is called
|
||||
# from icpx (--fsycl-host-compiler)
|
||||
echo 'export NIX_CC_WRAPPER_INTEL=1' >>$out/nix-support/cc-wrapper-hook
|
||||
|
||||
# oneMath looks for sycl libraries in bin/../lib
|
||||
ln -s ${cc}/lib $out/lib
|
||||
ln -s ${cc}/include $out/include
|
||||
'';
|
||||
};
|
||||
in
|
||||
wrapIntel llvm-intel-unwrapped
|
||||
@@ -16,19 +16,19 @@
|
||||
, useGit ? false
|
||||
, gitUrl ? "ssh://git@bscpm04.bsc.es/llvm-ompss/llvm-mono.git"
|
||||
, gitBranch ? "master"
|
||||
, gitCommit ? "872ba63f86edaefc9787984ef3fae9f2f94e0124" # github-release-2025.11
|
||||
, gitCommit ? "880e2341c56bad1dc14e8c369fb3356bec19018e"
|
||||
}:
|
||||
|
||||
let
|
||||
stdenv = llvmPackages_latest.stdenv;
|
||||
|
||||
release = rec {
|
||||
version = "2025.11";
|
||||
version = "2025.06";
|
||||
src = fetchFromGitHub {
|
||||
owner = "bsc-pm";
|
||||
repo = "llvm";
|
||||
rev = "refs/tags/github-release-${version}";
|
||||
hash = "sha256-UgwMTUkM9Z87dDH205swZFBeFhrcbLAxginViG40pBM=";
|
||||
hash = "sha256-ww9PpRmtz/M9IyLiZ8rAehx2UW4VpQt+svf4XfKBzKo=";
|
||||
};
|
||||
};
|
||||
|
||||
@@ -126,12 +126,4 @@ in stdenv.mkDerivation {
|
||||
# nanos6 installation, but this is would require a recompilation of clang each
|
||||
# time nanos6 is changed. Better to use the environment variable NANOS6_HOME,
|
||||
# and specify nanos6 at run time.
|
||||
|
||||
meta = {
|
||||
homepage = "https://gitlab.pm.bsc.es/llvm-ompss/llvm-mono";
|
||||
description = "C language family frontend for LLVM (for OmpSs-2)";
|
||||
maintainers = with lib.maintainers.bsc; [ rpenacob ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = [ lib.licenses.asl20 lib.licenses.llvm-exception ];
|
||||
};
|
||||
}
|
||||
|
||||
@@ -3,7 +3,6 @@
|
||||
, lib
|
||||
, gcc
|
||||
, clangOmpss2Unwrapped
|
||||
, writeShellScript
|
||||
, openmp ? null
|
||||
, wrapCCWith
|
||||
, llvmPackages_latest
|
||||
@@ -28,17 +27,20 @@ let
|
||||
# We need to replace the lld linker from bintools with our linker just built,
|
||||
# otherwise we run into incompatibility issues when mixing compiler and linker
|
||||
# versions.
|
||||
bintools-unwrapped = llvmPackages_latest.bintools-unwrapped.override {
|
||||
bintools-unwrapped = llvmPackages_latest.tools.bintools-unwrapped.override {
|
||||
lld = clangOmpss2Unwrapped;
|
||||
};
|
||||
bintools = llvmPackages_latest.bintools.override {
|
||||
bintools = llvmPackages_latest.tools.bintools.override {
|
||||
bintools = bintools-unwrapped;
|
||||
};
|
||||
targetConfig = stdenv.targetPlatform.config;
|
||||
inherit gcc;
|
||||
cc = clangOmpss2Unwrapped;
|
||||
gccVersion = with versions; let v = gcc.version; in concatStringsSep "." [(major v) (minor v) (patch v)];
|
||||
|
||||
in wrapCCWith {
|
||||
inherit cc bintools;
|
||||
# extraPackages adds packages to depsTargetTargetPropagated
|
||||
extraPackages = optional (openmp != null) openmp;
|
||||
extraBuildCommands = ''
|
||||
echo "-target ${targetConfig}" >> $out/nix-support/cc-cflags
|
||||
echo "-B${gcc.cc}/lib/gcc/${targetConfig}/${gccVersion}" >> $out/nix-support/cc-cflags
|
||||
@@ -55,50 +57,14 @@ let
|
||||
echo "--gcc-toolchain=${gcc}" >> $out/nix-support/cc-cflags
|
||||
|
||||
wrap clang++ $wrapper $ccPath/clang++
|
||||
|
||||
'' + optionalString (openmp != null) ''
|
||||
echo "export OPENMP_RUNTIME=${ompname}" >> $out/nix-support/cc-wrapper-hook
|
||||
'' + optionalString (ompss2rt != null) ''
|
||||
echo "export OMPSS2_RUNTIME=${rtname}" >> $out/nix-support/cc-wrapper-hook
|
||||
echo "export ${homevar}=${ompss2rt}" >> $out/nix-support/cc-wrapper-hook
|
||||
'' + optionalString (ompss2rt != null && ompss2rt.pname == "nodes") ''
|
||||
echo "export NOSV_HOME=${ompss2rt.nosv}" >> $out/nix-support/cc-wrapper-hook
|
||||
'';
|
||||
}
|
||||
|
||||
envExports = lib.optionalString (openmp != null) ''
|
||||
echo "export OPENMP_RUNTIME=${ompname}" >> $out/nix-support/cc-wrapper-hook
|
||||
'' + optionalString (ompss2rt != null) ''
|
||||
echo "export OMPSS2_RUNTIME=${rtname}" >> $out/nix-support/cc-wrapper-hook
|
||||
echo "export ${homevar}=${ompss2rt}" >> $out/nix-support/cc-wrapper-hook
|
||||
'' + optionalString (ompss2rt != null && ompss2rt.pname == "nodes") ''
|
||||
echo "export NOSV_HOME=${ompss2rt.nosv}" >> $out/nix-support/cc-wrapper-hook
|
||||
'';
|
||||
|
||||
extraPackages = optional (openmp != null) openmp;
|
||||
|
||||
wrappedCC = wrapCCWith {
|
||||
# extraPackages adds packages to depsTargetTargetPropagated
|
||||
inherit cc bintools extraPackages;
|
||||
extraBuildCommands = extraBuildCommands + envExports;
|
||||
};
|
||||
|
||||
resetIntelCCFlags = let tconf = builtins.replaceStrings ["-"] ["_"] targetConfig;
|
||||
in writeShellScript "remove-intel.sh" ''
|
||||
if [ "''${NIX_CC_WRAPPER_INTEL:-0}" = 1 ]; then
|
||||
unset NIX_CFLAGS_COMPILE_${tconf}
|
||||
unset NIX_CC_WRAPPER_FLAGS_SET_${tconf}
|
||||
|
||||
if (( "''${NIX_DEBUG:-0}" >= 1 )); then
|
||||
echo "ompss2: cleaned NIX_CFLAGS_COMPILE_${tconf} (invokation from intel compiler detected)"
|
||||
fi
|
||||
fi
|
||||
'';
|
||||
|
||||
intelExtraBuildCommands = ''
|
||||
sed -i 's|# Flirting.*|source ${resetIntelCCFlags}\n\n&|' $out/bin/clang
|
||||
sed -i 's|# Flirting.*|source ${resetIntelCCFlags}\n\n&|' $out/bin/clang++
|
||||
'';
|
||||
|
||||
wrappedCCIntel = wrapCCWith {
|
||||
inherit cc bintools extraPackages;
|
||||
# extraPackages adds packages to depsTargetTargetPropagated
|
||||
extraBuildCommands = intelExtraBuildCommands + envExports;
|
||||
};
|
||||
|
||||
in wrappedCC.overrideAttrs (oldAttrs: {
|
||||
passthru = oldAttrs.passthru // {
|
||||
forIcpx = wrappedCCIntel;
|
||||
};
|
||||
})
|
||||
|
||||
@@ -74,13 +74,5 @@ stdenv.mkDerivation rec {
|
||||
passthru = {
|
||||
inherit nosv;
|
||||
};
|
||||
|
||||
meta = {
|
||||
homepage = "https://gitlab.pm.bsc.es/llvm-ompss/llvm-mono";
|
||||
description = "Support for the OpenMP language (with nOS-V)";
|
||||
maintainers = with lib.maintainers.bsc; [ rpenacob ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = [ lib.licenses.asl20 lib.licenses.llvm-exception ];
|
||||
};
|
||||
}
|
||||
|
||||
|
||||
@@ -42,9 +42,8 @@ stdenv.mkDerivation rec {
|
||||
|
||||
meta = {
|
||||
description = "lmbench";
|
||||
homepage = "https://github.com/intel/lmbench";
|
||||
maintainers = with lib.maintainers.bsc; [ rarias ];
|
||||
homepage = "http://www.bitmover.com/lmbench/";
|
||||
maintainers = [ ];
|
||||
platforms = lib.platforms.all;
|
||||
license = lib.licenses.gpl2Plus;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,7 +0,0 @@
|
||||
builtins.mapAttrs (name: value: { email = name + "@bsc.es"; } // value) {
|
||||
abonerib.name = "Aleix Boné";
|
||||
arocanon.name = "Aleix Roca";
|
||||
rarias.name = "Rodrigo Arias";
|
||||
rpenacob.name = "Raúl Peñacoba";
|
||||
varcila.name = "Vincent Arcila";
|
||||
}
|
||||
@@ -1,6 +1,5 @@
|
||||
{
|
||||
stdenv
|
||||
, lib
|
||||
, fetchFromGitHub
|
||||
, autoreconfHook
|
||||
, nanos6
|
||||
@@ -63,13 +62,4 @@ stdenv.mkDerivation rec {
|
||||
# Fails with "memory exhausted" with bison 3.7.1
|
||||
# "--enable-bison-regeneration"
|
||||
];
|
||||
|
||||
meta = {
|
||||
broken = true;
|
||||
homepage = "https://github.com/bsc-pm/mcxx";
|
||||
description = "C/C++/Fortran source-to-source compilation infrastructure aimed at fast prototyping";
|
||||
maintainers = with lib.maintainers.bsc; [ rpenacob ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.gpl3Plus;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,6 +1,5 @@
|
||||
{
|
||||
stdenv
|
||||
, lib
|
||||
, fetchFromGitHub
|
||||
, autoreconfHook
|
||||
, nanos6
|
||||
@@ -58,12 +57,4 @@ stdenv.mkDerivation rec {
|
||||
# Fails with "memory exhausted" with bison 3.7.1
|
||||
# "--enable-bison-regeneration"
|
||||
];
|
||||
|
||||
meta = {
|
||||
homepage = "https://github.com/bsc-pm/mcxx";
|
||||
description = "C/C++/Fortran source-to-source compilation infrastructure aimed at fast prototyping";
|
||||
maintainers = with lib.maintainers.bsc; [ rpenacob ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.gpl3Plus;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,5 +1,4 @@
|
||||
{ stdenv
|
||||
, lib
|
||||
, fetchgit
|
||||
, autoreconfHook
|
||||
, nanos6
|
||||
@@ -57,12 +56,4 @@ stdenv.mkDerivation rec {
|
||||
#preBuild = ''
|
||||
# make generate_builtins_ia32 GXX_X86_BUILTINS=${gcc}/bin/g++
|
||||
#'';
|
||||
#
|
||||
meta = {
|
||||
homepage = "https://github.com/bsc-pm/mcxx";
|
||||
description = "C/C++/Fortran source-to-source compilation infrastructure aimed at fast prototyping";
|
||||
maintainers = with lib.maintainers.bsc; [ rarias ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.gpl3Plus;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,11 +1,9 @@
|
||||
{ python3Packages, lib }:
|
||||
|
||||
python3Packages.buildPythonApplication {
|
||||
python3Packages.buildPythonApplication rec {
|
||||
pname = "meteocat-exporter";
|
||||
version = "1.0";
|
||||
|
||||
pyproject = true;
|
||||
|
||||
src = ./.;
|
||||
|
||||
doCheck = false;
|
||||
|
||||
@@ -6,13 +6,6 @@
|
||||
, pmix
|
||||
, gfortran
|
||||
, symlinkJoin
|
||||
# Disabled when cross-compiling
|
||||
# To fix cross compilation, we should fill the values in:
|
||||
# https://github.com/pmodels/mpich/blob/main/maint/fcrosscompile/cross_values.txt.in
|
||||
# For each arch
|
||||
, enableFortran ? stdenv.hostPlatform == stdenv.buildPlatform
|
||||
, perl
|
||||
, targetPackages
|
||||
}:
|
||||
|
||||
let
|
||||
@@ -22,13 +15,10 @@ let
|
||||
paths = [ pmix.dev pmix.out ];
|
||||
};
|
||||
in mpich.overrideAttrs (old: {
|
||||
buildInputs = old.buildInputs ++ [
|
||||
buildInput = old.buildInputs ++ [
|
||||
libfabric
|
||||
pmixAll
|
||||
];
|
||||
nativeBuildInputs = old.nativeBuildInputs ++ [
|
||||
perl
|
||||
];
|
||||
configureFlags = [
|
||||
"--enable-shared"
|
||||
"--enable-sharedlib"
|
||||
@@ -41,21 +31,6 @@ in mpich.overrideAttrs (old: {
|
||||
] ++ lib.optionals (lib.versionAtLeast gfortran.version "10") [
|
||||
"FFLAGS=-fallow-argument-mismatch" # https://github.com/pmodels/mpich/issues/4300
|
||||
"FCFLAGS=-fallow-argument-mismatch"
|
||||
] ++ lib.optionals (!enableFortran) [
|
||||
"--disable-fortran"
|
||||
];
|
||||
|
||||
preFixup = ''
|
||||
sed -i 's:^CC=.*:CC=${targetPackages.stdenv.cc}/bin/${targetPackages.stdenv.cc.targetPrefix}cc:' $out/bin/mpicc
|
||||
sed -i 's:^CXX=.*:CXX=${targetPackages.stdenv.cc}/bin/${targetPackages.stdenv.cc.targetPrefix}c++:' $out/bin/mpicxx
|
||||
'' + lib.optionalString enableFortran ''
|
||||
sed -i 's:^FC=.*:FC=${targetPackages.gfortran or gfortran}/bin/${targetPackages.gfortran.targetPrefix or gfortran.targetPrefix}gfortran:' $out/bin/mpifort
|
||||
'';
|
||||
|
||||
hardeningDisable = [ "all" ];
|
||||
|
||||
meta = old.meta // {
|
||||
maintainers = old.meta.maintainers ++ (with lib.maintainers.bsc; [ rarias ]);
|
||||
cross = true;
|
||||
};
|
||||
})
|
||||
|
||||
@@ -119,12 +119,11 @@ in
|
||||
echo "export NANOS6_HOME=$out" >> $out/nix-support/setup-hook
|
||||
'';
|
||||
|
||||
meta = {
|
||||
meta = with lib; {
|
||||
homepage = "https://github.com/bsc-pm/nanos6";
|
||||
description = "Nanos6 runtime for OmpSs-2" +
|
||||
optionalString (enableDebug) " (with debug symbols)";
|
||||
maintainers = with lib.maintainers.bsc; [ rarias ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.gpl3Plus;
|
||||
platforms = platforms.linux;
|
||||
license = licenses.gpl3;
|
||||
};
|
||||
})
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ jemalloc, lib }:
|
||||
{ jemalloc }:
|
||||
|
||||
jemalloc.overrideAttrs (old: {
|
||||
configureFlags = old.configureFlags ++ [
|
||||
@@ -8,6 +8,5 @@ jemalloc.overrideAttrs (old: {
|
||||
hardeningDisable = [ "all" ];
|
||||
meta = old.meta // {
|
||||
description = old.meta.description + " (for Nanos6)";
|
||||
maintainers = (old.meta.maintainers or []) ++ (with lib.maintainers.bsc; [ rarias ]);
|
||||
};
|
||||
})
|
||||
|
||||
@@ -1,6 +1,5 @@
|
||||
{
|
||||
stdenv
|
||||
, lib
|
||||
, bashInteractive
|
||||
, busybox
|
||||
, nix
|
||||
@@ -87,14 +86,5 @@ stdenv.mkDerivation rec {
|
||||
mkdir -p $out/share
|
||||
cp ${nix_conf} $out/share/nix.conf
|
||||
'';
|
||||
|
||||
meta = {
|
||||
homepage = null;
|
||||
description = "nix bubblewrap wrapper";
|
||||
maintainers = [ ];
|
||||
broken = true;
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.mit;
|
||||
};
|
||||
}
|
||||
|
||||
|
||||
@@ -1,22 +0,0 @@
|
||||
{
|
||||
stdenv
|
||||
, lib
|
||||
}:
|
||||
|
||||
stdenv.mkDerivation {
|
||||
pname = "nixgen";
|
||||
version = "0.0.1";
|
||||
src = ./nixgen;
|
||||
dontUnpack = true;
|
||||
phases = [ "installPhase" ];
|
||||
installPhase = ''
|
||||
mkdir -p $out/bin
|
||||
cp -a $src $out/bin/nixgen
|
||||
'';
|
||||
meta = {
|
||||
description = "Quickly generate flake.nix from command line";
|
||||
maintainers = with lib.maintainers.bsc; [ rarias ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.gpl3Plus;
|
||||
};
|
||||
}
|
||||
@@ -1,97 +0,0 @@
|
||||
#!/bin/sh
|
||||
#
|
||||
# Copyright (c) 2025, Barcelona Supercomputing Center (BSC)
|
||||
# SPDX-License-Identifier: GPL-3.0+
|
||||
# Author: Rodrigo Arias Mallo <rodrigo.arias@bsc.es>
|
||||
|
||||
function usage() {
|
||||
echo "USAGE: nixgen [-f] [package [...]] [-b package [...]]" >&2
|
||||
echo " Generates a flake.nix file with the given packages." >&2
|
||||
echo " After flake.nix is created, use 'nix develop' to enter the shell." >&2
|
||||
echo "OPTIONS" >&2
|
||||
echo " -f Overwrite existing flake.nix (default: no)." >&2
|
||||
echo " packages... Add these packages to the shell." >&2
|
||||
echo " -b packages... Add the dependencies needed to build these packages." >&2
|
||||
echo "EXAMPLE" >&2
|
||||
echo " $ nixgen ovni bigotes -b nosv tampi" >&2
|
||||
echo " Adds the packages ovni and bigotes as well as all required dependencies" >&2
|
||||
echo " to build nosv and tampi." >&2
|
||||
echo "AUTHOR" >&2
|
||||
echo " Rodrigo Arias Mallo <rodrigo.arias@bsc.es>" >&2
|
||||
exit 1
|
||||
}
|
||||
|
||||
mode=package
|
||||
packages=
|
||||
inputsFrom=
|
||||
force=
|
||||
|
||||
if [[ $# -eq 0 ]]; then
|
||||
usage
|
||||
fi
|
||||
|
||||
while [[ $# -gt 0 ]]; do
|
||||
case $1 in -b)
|
||||
mode=build
|
||||
shift
|
||||
;;
|
||||
-f)
|
||||
force=1
|
||||
shift
|
||||
;;
|
||||
-h)
|
||||
usage
|
||||
;;
|
||||
-*|--*)
|
||||
echo "error: unknown option $1" >&2
|
||||
exit 1
|
||||
;;
|
||||
*)
|
||||
if [ "$mode" == "package" ]; then
|
||||
packages+="${packages:+ }$1"
|
||||
else
|
||||
inputsFrom+="${inputsFrom:+ }$1"
|
||||
fi
|
||||
shift
|
||||
;;
|
||||
esac
|
||||
done
|
||||
|
||||
if [ ! "$force" -a -e flake.nix ]; then
|
||||
echo "error: flake.nix exists, force overwrite with -f" >&2
|
||||
exit 1
|
||||
fi
|
||||
|
||||
cat > flake.nix <<EOF
|
||||
{
|
||||
inputs.jungle.url = "git+https://jungle.bsc.es/git/rarias/jungle";
|
||||
outputs = { self, jungle }:
|
||||
let
|
||||
nixpkgs = jungle.inputs.nixpkgs;
|
||||
customOverlay = (final: prev: {
|
||||
# Example overlay, for now empty
|
||||
});
|
||||
pkgs = import nixpkgs {
|
||||
system = "x86_64-linux";
|
||||
overlays = [
|
||||
# Apply jungle overlay to get our BSC custom packages
|
||||
jungle.outputs.bscOverlay
|
||||
# And on top apply our local changes to customize for cluster
|
||||
customOverlay
|
||||
];
|
||||
};
|
||||
in {
|
||||
devShells.x86_64-linux.default = pkgs.mkShell {
|
||||
pname = "devshell";
|
||||
# Include these packages in the shell
|
||||
packages = with pkgs; [
|
||||
$packages
|
||||
];
|
||||
# The dependencies needed to build these packages will be also included
|
||||
inputsFrom = with pkgs; [
|
||||
$inputsFrom
|
||||
];
|
||||
};
|
||||
};
|
||||
}
|
||||
EOF
|
||||
@@ -1,6 +1,5 @@
|
||||
{
|
||||
stdenv
|
||||
, lib
|
||||
, glibc
|
||||
}:
|
||||
|
||||
@@ -16,11 +15,4 @@ stdenv.mkDerivation rec {
|
||||
makeFlags = [ "DESTDIR=$(out)" ];
|
||||
preBuild = "env";
|
||||
dontPatchShebangs = true;
|
||||
|
||||
meta = {
|
||||
homepage = "https://gitlab.pm.bsc.es/rarias/nixtools";
|
||||
description = "nix bubblewrap wrapper";
|
||||
maintainers = with lib.maintainers.bsc; [ rarias ];
|
||||
platforms = lib.platforms.linux;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -3,6 +3,7 @@
|
||||
, lib
|
||||
, fetchFromGitHub
|
||||
, pkg-config
|
||||
, perl
|
||||
, numactl
|
||||
, hwloc
|
||||
, boost
|
||||
@@ -10,23 +11,22 @@
|
||||
, ovni
|
||||
, nosv
|
||||
, clangOmpss2
|
||||
, which
|
||||
, useGit ? false
|
||||
, gitUrl ? "ssh://git@gitlab-internal.bsc.es/nos-v/nodes.git"
|
||||
, gitBranch ? "master"
|
||||
, gitCommit ? "511489e71504a44381e0930562e7ac80ac69a848" # version-1.4
|
||||
, gitCommit ? "6002ec9ae6eb876d962cc34366952a3b26599ba6"
|
||||
}:
|
||||
|
||||
with lib;
|
||||
|
||||
let
|
||||
release = rec {
|
||||
version = "1.4";
|
||||
version = "1.3";
|
||||
src = fetchFromGitHub {
|
||||
owner = "bsc-pm";
|
||||
repo = "nodes";
|
||||
rev = "version-${version}";
|
||||
hash = "sha256-+lR/R0l3fGZO3XG7whMorFW2y2YZ0ZFnLeOHyQYrAsQ=";
|
||||
hash = "sha256-cFb9pxcjtkMmH0CsGgUO9LTdXDNh7MCqicgGWawLrsU=";
|
||||
};
|
||||
};
|
||||
|
||||
@@ -59,7 +59,6 @@ in
|
||||
doCheck = false;
|
||||
nativeCheckInputs = [
|
||||
clangOmpss2
|
||||
which
|
||||
];
|
||||
|
||||
# The "bindnow" flags are incompatible with ifunc resolution mechanism. We
|
||||
@@ -82,12 +81,4 @@ in
|
||||
passthru = {
|
||||
inherit nosv;
|
||||
};
|
||||
|
||||
meta = {
|
||||
homepage = "https://gitlab.bsc.es/nos-v/nodes";
|
||||
description = "Runtime library designed to work on top of the nOS-V runtime";
|
||||
maintainers = with lib.maintainers.bsc; [ abonerib rarias ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.gpl3Plus;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -13,19 +13,19 @@
|
||||
, useGit ? false
|
||||
, gitUrl ? "git@gitlab-internal.bsc.es:nos-v/nos-v.git"
|
||||
, gitBranch ? "master"
|
||||
, gitCommit ? "1108e4786b58e0feb9a16fa093010b763eb2f8e8" # version 4.0.0
|
||||
, gitCommit ? "9f47063873c3aa9d6a47482a82c5000a8c813dd8"
|
||||
}:
|
||||
|
||||
with lib;
|
||||
|
||||
let
|
||||
release = rec {
|
||||
version = "4.0.0";
|
||||
version = "3.2.0";
|
||||
src = fetchFromGitHub {
|
||||
owner = "bsc-pm";
|
||||
repo = "nos-v";
|
||||
rev = "${version}";
|
||||
hash = "sha256-llaq73bd/YxLVKNlMebnUHKa4z3sdcsuDUoVwUxNuw8=";
|
||||
hash = "sha256-yaz92426EM8trdkBJlISmAoG9KJCDTvoAW/HKrasvOw=";
|
||||
};
|
||||
};
|
||||
|
||||
@@ -59,12 +59,4 @@ in
|
||||
hwloc
|
||||
ovni
|
||||
] ++ lib.optionals enablePapi [ papi ];
|
||||
|
||||
meta = {
|
||||
homepage = "https://gitlab.bsc.es/nos-v/nos-v";
|
||||
description = "Tasking library enables the co-execution of multiple applications with system-wide scheduling and a centralized management of resources";
|
||||
maintainers = with lib.maintainers.bsc; [ abonerib rarias ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.gpl3Plus;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,91 +0,0 @@
|
||||
{
|
||||
lib,
|
||||
fetchFromGitHub,
|
||||
cmake,
|
||||
withCFlags,
|
||||
intelPackages,
|
||||
|
||||
mklSupport ? true,
|
||||
|
||||
config,
|
||||
|
||||
cudaSupport ? config.cudaSupport,
|
||||
cudaPackages ? { },
|
||||
|
||||
rocmSupport ? config.rocmSupport,
|
||||
hipTargets ? null, # only one target at a time supported
|
||||
rocmPackages ? { },
|
||||
}:
|
||||
|
||||
let
|
||||
# rocmSupport is not enough, we need a specific target
|
||||
enableHip = rocmSupport && hipTargets != null;
|
||||
|
||||
stdenv = withCFlags (lib.optionals cudaSupport [
|
||||
"--cuda-path=${cudaPackages.cudatoolkit}"
|
||||
]) intelPackages.stdenv;
|
||||
in
|
||||
|
||||
# at least one backend has to be enabled
|
||||
assert mklSupport || cudaSupport || enableHip;
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "oneMath";
|
||||
version = "0.8";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "uxlfoundation";
|
||||
repo = "oneMath";
|
||||
rev = "v${version}";
|
||||
sha256 = "sha256-xK8lKI3oqKlx3xtvdScpMq+HXAuoYCP0BZdkEqnJP5o=";
|
||||
};
|
||||
|
||||
cmakeFlags = [
|
||||
(lib.cmakeBool "ENABLE_MKLCPU_BACKEND" mklSupport)
|
||||
(lib.cmakeBool "ENABLE_MKLGPU_BACKEND" mklSupport)
|
||||
|
||||
(lib.cmakeBool "ENABLE_CUBLAS_BACKEND" cudaSupport)
|
||||
(lib.cmakeBool "ENABLE_CUFFT_BACKEND" cudaSupport)
|
||||
(lib.cmakeBool "ENABLE_CURAND_BACKEND" cudaSupport)
|
||||
(lib.cmakeBool "ENABLE_CUSOLVER_BACKEND" cudaSupport)
|
||||
(lib.cmakeBool "ENABLE_CUSPARSE_BACKEND" cudaSupport)
|
||||
|
||||
(lib.cmakeBool "ENABLE_ROCBLAS_BACKEND" enableHip)
|
||||
(lib.cmakeBool "ENABLE_ROCFFT_BACKEND" enableHip)
|
||||
(lib.cmakeBool "ENABLE_ROCSOLVER_BACKEND" enableHip)
|
||||
(lib.cmakeBool "ENABLE_ROCRAND_BACKEND" enableHip)
|
||||
(lib.cmakeBool "ENABLE_ROCSPARSE_BACKEND" enableHip)
|
||||
|
||||
(lib.cmakeBool "BUILD_FUNCTIONAL_TESTS" false)
|
||||
(lib.cmakeBool "BUILD_EXAMPLES" false)
|
||||
]
|
||||
++ lib.optionals enableHip [
|
||||
(lib.cmakeFeature "HIP_TARGETS" hipTargets)
|
||||
];
|
||||
|
||||
nativeBuildInputs = [ cmake ];
|
||||
buildInputs =
|
||||
lib.optionals (mklSupport) [
|
||||
intelPackages.mkl
|
||||
intelPackages.tbb
|
||||
]
|
||||
++ lib.optionals (enableHip) [
|
||||
rocmPackages.rocmPath
|
||||
rocmPackages.rocblas
|
||||
rocmPackages.rocfft
|
||||
rocmPackages.rocsolver
|
||||
rocmPackages.rocrand
|
||||
rocmPackages.rocsparse
|
||||
]
|
||||
++ lib.optionals (cudaSupport) [
|
||||
(lib.getDev cudaPackages.cuda_cudart)
|
||||
cudaPackages.cudatoolkit
|
||||
|
||||
cudaPackages.libcublas
|
||||
cudaPackages.libcurand
|
||||
cudaPackages.libcufft
|
||||
cudaPackages.libcusparse
|
||||
cudaPackages.libcusolver
|
||||
];
|
||||
|
||||
}
|
||||
@@ -32,11 +32,6 @@ stdenv.mkDerivation rec {
|
||||
"CXX=mpicxx"
|
||||
];
|
||||
|
||||
env = {
|
||||
MPICH_CC="${stdenv.cc}/bin/${stdenv.cc.targetPrefix}cc";
|
||||
MPICH_CXX="${stdenv.cc}/bin/${stdenv.cc.targetPrefix}c++";
|
||||
};
|
||||
|
||||
postInstall = ''
|
||||
mkdir -p $out/bin
|
||||
for f in $(find $out -executable -type f); do
|
||||
@@ -49,6 +44,5 @@ stdenv.mkDerivation rec {
|
||||
homepage = "http://mvapich.cse.ohio-state.edu/benchmarks/";
|
||||
maintainers = [ ];
|
||||
platforms = lib.platforms.all;
|
||||
cross = true;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -7,7 +7,7 @@
|
||||
, useGit ? false
|
||||
, gitBranch ? "master"
|
||||
, gitUrl ? "ssh://git@bscpm04.bsc.es/rarias/ovni.git"
|
||||
, gitCommit ? "06432668f346c8bdc1006fabc23e94ccb81b0d8b" # version 1.13.0
|
||||
, gitCommit ? "e4f62382076f0cf0b1d08175cf57cc0bc51abc61"
|
||||
, enableDebug ? false
|
||||
# Only enable MPI if the build is native (fails on cross-compilation)
|
||||
, useMpi ? (stdenv.buildPlatform.canExecute stdenv.hostPlatform)
|
||||
@@ -15,13 +15,13 @@
|
||||
|
||||
let
|
||||
release = rec {
|
||||
version = "1.13.0";
|
||||
version = "1.12.0";
|
||||
src = fetchFromGitHub {
|
||||
owner = "bsc-pm";
|
||||
repo = "ovni";
|
||||
rev = "${version}";
|
||||
hash = "sha256-0l2ryIyWNiZqeYdVlnj/WnQGS3xFCY4ICG8JedX424w=";
|
||||
} // { shortRev = "0643266"; };
|
||||
hash = "sha256-H04JvsVKrdqr3ON7JhU0g17jjlg/jzQ7eTfx9vUNd3E=";
|
||||
} // { shortRev = "a73afcf"; };
|
||||
};
|
||||
|
||||
git = rec {
|
||||
@@ -55,13 +55,7 @@ in
|
||||
doCheck = true;
|
||||
checkTarget = "test";
|
||||
hardeningDisable = [ "all" ];
|
||||
|
||||
meta = {
|
||||
homepage = "https://ovni.readthedocs.io";
|
||||
description = "Obtuse but Versatile Nanoscale Instrumentation";
|
||||
maintainers = with lib.maintainers.bsc; [ rarias ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.gpl3Plus;
|
||||
cross = true;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,6 +1,5 @@
|
||||
{
|
||||
stdenv
|
||||
, lib
|
||||
, fetchFromGitHub
|
||||
, autoreconfHook
|
||||
, boost
|
||||
@@ -12,7 +11,7 @@
|
||||
, paraverKernel
|
||||
, openssl
|
||||
, glibcLocales
|
||||
, wrapGAppsHook3
|
||||
, wrapGAppsHook
|
||||
}:
|
||||
|
||||
let
|
||||
@@ -64,7 +63,7 @@ stdenv.mkDerivation rec {
|
||||
autoconf
|
||||
automake
|
||||
autoreconfHook
|
||||
wrapGAppsHook3
|
||||
wrapGAppsHook
|
||||
];
|
||||
|
||||
buildInputs = [
|
||||
@@ -89,18 +88,4 @@ stdenv.mkDerivation rec {
|
||||
mkdir -p $out/share/man
|
||||
mv $out/share/doc/wxparaver_help_contents/man $out/share/man/man1
|
||||
'';
|
||||
|
||||
meta = {
|
||||
homepage = "https://tools.bsc.es/paraver";
|
||||
downloadPage = "https://github.com/bsc-performance-tools/wxparaver";
|
||||
description = "Performance analyzer based on event traces";
|
||||
longDescription = ''
|
||||
Trace-based visualization and analysis tool designed to study quantitative
|
||||
detailed metrics and obtain qualitative knowledge of the performance of
|
||||
applications, libraries, processors and whole architectures
|
||||
'';
|
||||
maintainers = with lib.maintainers.bsc; [ rarias ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.lgpl21Plus;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,6 +1,5 @@
|
||||
{
|
||||
stdenv
|
||||
, lib
|
||||
, fetchFromGitHub
|
||||
, autoreconfHook
|
||||
, boost
|
||||
@@ -58,13 +57,4 @@ stdenv.mkDerivation rec {
|
||||
xml2
|
||||
zlib
|
||||
];
|
||||
|
||||
meta = {
|
||||
homepage = "https://tools.bsc.es/paraver";
|
||||
downloadPage = "https://github.com/bsc-performance-tools/paraver-kernel";
|
||||
description = "Kernel library used by wxparaver";
|
||||
maintainers = with lib.maintainers.bsc; [ rarias ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = lib.licenses.lgpl21Plus;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,26 +0,0 @@
|
||||
From ccf301659caac9b5e973ba1f2d32352acf617a98 Mon Sep 17 00:00:00 2001
|
||||
From: =?UTF-8?q?Aleix=20Bon=C3=A9?= <aleix.boneribo@bsc.es>
|
||||
Date: Tue, 2 Jul 2024 16:45:05 +0200
|
||||
Subject: [PATCH] cmake: do not use suffix
|
||||
|
||||
---
|
||||
cmake/LLVM.cmake | 3 ++
|
||||
1 files changed, 3 insertions(+)
|
||||
|
||||
diff --git a/cmake/LLVM.cmake b/cmake/LLVM.cmake
|
||||
index f4dbda065..e29144dce 100644
|
||||
--- a/cmake/LLVM.cmake
|
||||
+++ b/cmake/LLVM.cmake
|
||||
@@ -65,6 +65,9 @@ else()
|
||||
message(WARNING "Cannot determine llvm binary suffix from ${LLVM_CONFIG}")
|
||||
endif()
|
||||
message(STATUS "LLVM binaries suffix : ${LLVM_BINARY_SUFFIX}")
|
||||
+
|
||||
+ # We don't want suffixes in nix
|
||||
+ set(LLVM_BINARY_SUFFIX "")
|
||||
endif()
|
||||
|
||||
get_filename_component(LLVM_CONFIG_LOCATION "${LLVM_CONFIG}" DIRECTORY)
|
||||
--
|
||||
2.45.1
|
||||
|
||||
@@ -1,33 +0,0 @@
|
||||
From f24b456c50f587b05cc8f2699c94d8cdefc5b13e Mon Sep 17 00:00:00 2001
|
||||
From: =?UTF-8?q?Aleix=20Bon=C3=A9?= <aleix.boneribo@bsc.es>
|
||||
Date: Tue, 2 Jul 2024 17:11:11 +0200
|
||||
Subject: [PATCH] cmake: native build tools
|
||||
|
||||
---
|
||||
cmake/LLVM.cmake | 7 +-
|
||||
1 files changed, 6 insertions(+), 1 deletion(-)
|
||||
|
||||
diff --git a/cmake/LLVM.cmake b/cmake/LLVM.cmake
|
||||
index e29144dce..b9f14ce6a 100644
|
||||
--- a/cmake/LLVM.cmake
|
||||
+++ b/cmake/LLVM.cmake
|
||||
@@ -269,10 +269,15 @@ endforeach()
|
||||
|
||||
####################################################################
|
||||
|
||||
+if(DEFINED LLVM_NATIVE_TOOL_DIR)
|
||||
+ set(TOOL_DIR "${LLVM_NATIVE_TOOL_DIR}")
|
||||
+ message(STATUS "TOOL_DIR=${TOOL_DIR}")
|
||||
+endif()
|
||||
+
|
||||
macro(find_program_or_die OUTPUT_VAR PROG_NAME DOCSTRING)
|
||||
find_program(${OUTPUT_VAR}
|
||||
NAMES "${PROG_NAME}${LLVM_BINARY_SUFFIX}${CMAKE_EXECUTABLE_SUFFIX}"
|
||||
- HINTS "${LLVM_BINDIR}" "${LLVM_CONFIG_LOCATION}"
|
||||
+ HINTS "${TOOL_DIR}" "${LLVM_BINDIR}" "${LLVM_CONFIG_LOCATION}"
|
||||
DOC "${DOCSTRING}"
|
||||
NO_CMAKE_PATH
|
||||
NO_CMAKE_ENVIRONMENT_PATH
|
||||
--
|
||||
2.45.1
|
||||
|
||||
@@ -1,48 +0,0 @@
|
||||
From 4688b5ce895761c884ae15fc0234ed8d623b988b Mon Sep 17 00:00:00 2001
|
||||
From: =?UTF-8?q?Aleix=20Bon=C3=A9?= <aleix.boneribo@bsc.es>
|
||||
Date: Tue, 2 Jul 2024 15:41:47 +0200
|
||||
Subject: [PATCH] cmake: use clang from cmake variable
|
||||
|
||||
---
|
||||
cmake/LLVM.cmake | 22 ++++++++++++++++++++--
|
||||
1 file changed, 20 insertions(+), 2 deletions(-)
|
||||
|
||||
diff --git a/cmake/LLVM.cmake b/cmake/LLVM.cmake
|
||||
index 71b786dc7..f4dbda065 100644
|
||||
--- a/cmake/LLVM.cmake
|
||||
+++ b/cmake/LLVM.cmake
|
||||
@@ -281,11 +281,29 @@ macro(find_program_or_die OUTPUT_VAR PROG_NAME DOCSTRING)
|
||||
endif()
|
||||
endmacro()
|
||||
|
||||
-find_program_or_die( CLANG "clang" "clang binary")
|
||||
+# -DCMAKE_C_COMPILER=riscv64-unknown-linux-gnu-clang -DCMAKE_CXX_COMPILER=riscv64-unknown-linux-gnu-clang++
|
||||
+
|
||||
+# if(DEFINED CLANG_EXECUTABLE)
|
||||
+if(DEFINED CMAKE_C_COMPILER)
|
||||
+ # set(CLANG "${CLANG_EXECUTABLE}")
|
||||
+ set(CLANG "${CMAKE_C_COMPILER}")
|
||||
+ message(STATUS "Using CLANG_EXECUTABLE: ${CLANG}")
|
||||
+else()
|
||||
+ find_program_or_die( CLANG "clang" "clang binary")
|
||||
+endif()
|
||||
execute_process(COMMAND "${CLANG}" "--version" OUTPUT_VARIABLE LLVM_CLANG_VERSION RESULT_VARIABLE CLANG_RES)
|
||||
+
|
||||
# TODO this should be optional
|
||||
-find_program_or_die( CLANGXX "clang++" "clang++ binary")
|
||||
+# if(DEFINED CLANGXX_EXECUTABLE)
|
||||
+if(DEFINED CMAKE_CXX_COMPILER)
|
||||
+ # set(CLANGXX "${CLANGXX_EXECUTABLE}")
|
||||
+ set(CLANGXX "${CMAKE_CXX_COMPILER}")
|
||||
+ message(STATUS "Using CLANGXX_EXECUTABLE: ${CLANGXX}")
|
||||
+else()
|
||||
+ find_program_or_die( CLANGXX "clang++" "clang++ binary")
|
||||
+endif()
|
||||
execute_process(COMMAND "${CLANGXX}" "--version" OUTPUT_VARIABLE LLVM_CLANGXX_VERSION RESULT_VARIABLE CLANGXX_RES)
|
||||
+
|
||||
if(CLANGXX_RES OR CLANG_RES)
|
||||
message(FATAL_ERROR "Failed running clang/clang++ --version")
|
||||
endif()
|
||||
--
|
||||
2.45.1
|
||||
|
||||
@@ -1,255 +0,0 @@
|
||||
{
|
||||
lib,
|
||||
llvmPackages,
|
||||
ninja,
|
||||
cmake,
|
||||
hwloc,
|
||||
ocl-icd,
|
||||
opencl-headers,
|
||||
getconf,
|
||||
pkg-config,
|
||||
spirv-llvm-translator,
|
||||
spirv-tools,
|
||||
libxml2, # required for statically linked llvm
|
||||
python3,
|
||||
writableTmpDirAsHomeHook,
|
||||
writeText,
|
||||
runCommand,
|
||||
opencl-cts,
|
||||
|
||||
fetchFromGitHub,
|
||||
|
||||
useGit ? false,
|
||||
gitUrl ? "git@gitlab-internal.bsc.es:task-awareness/pocl/pocl.git",
|
||||
gitBranch ? "feat/nosv",
|
||||
gitCommit ? "556542309fc3c5900cf05dae5b41d200cd3de6a0",
|
||||
|
||||
staticLLVM ? true,
|
||||
enableICD ? true,
|
||||
enableSPIRV ? true,
|
||||
enableHWLOC ? true,
|
||||
enableRemoteServer ? false,
|
||||
enableRemoteClient ? false,
|
||||
enableDistroVariants ? false,
|
||||
|
||||
lttng-ust,
|
||||
enableLTTNG ? false,
|
||||
|
||||
onetbb,
|
||||
enableTBB ? false,
|
||||
|
||||
nosv ? null,
|
||||
ovni ? null,
|
||||
enableNOSV ? useGit,
|
||||
enableOVNI ? useGit,
|
||||
|
||||
buildPackages,
|
||||
targetPackages,
|
||||
nix-update-script,
|
||||
}:
|
||||
|
||||
assert (enableNOSV || enableOVNI) -> useGit;
|
||||
|
||||
let
|
||||
|
||||
release = rec {
|
||||
version = "7.1";
|
||||
src = fetchFromGitHub {
|
||||
owner = "pocl";
|
||||
repo = "pocl";
|
||||
tag = "v${version}";
|
||||
hash = "sha256-bS6vTIjLO7YLs7qYLKW0cYYbEJ/hRS/+IjjAKbkj8ac=";
|
||||
};
|
||||
};
|
||||
|
||||
git = rec {
|
||||
version = src.shortRev;
|
||||
src = builtins.fetchGit {
|
||||
url = gitUrl;
|
||||
ref = gitBranch;
|
||||
rev = gitCommit;
|
||||
};
|
||||
};
|
||||
|
||||
source = if (useGit) then git else release;
|
||||
|
||||
stdenv = llvmPackages.stdenv;
|
||||
|
||||
buildLlvmPackages = buildPackages.llvmPackages;
|
||||
|
||||
isCross = stdenv.hostPlatform != stdenv.buildPlatform;
|
||||
|
||||
featureList = lib.concatStringsSep "+" (
|
||||
(lib.optionals enableICD [ "icd" ])
|
||||
++ (lib.optionals enableNOSV [ "nosv" ])
|
||||
++ (lib.optionals enableOVNI [ "ovni" ])
|
||||
++ (lib.optionals enableSPIRV [ "spirv" ])
|
||||
++ (lib.optionals enableTBB [ "tbb" ])
|
||||
++ (lib.optionals enableRemoteClient [ "server" ])
|
||||
++ (lib.optionals enableRemoteServer [ "client" ])
|
||||
);
|
||||
in
|
||||
|
||||
stdenv.mkDerivation (finalAttrs: {
|
||||
pname = "pocl";
|
||||
version = featureList + "-" + source.version;
|
||||
inherit (source) src;
|
||||
|
||||
patches = lib.optionals useGit [
|
||||
./0001-cmake-use-clang-from-cmake-variable.patch
|
||||
./0001-cmake-do-not-use-suffix.patch
|
||||
./0001-cmake-native-build-tools.patch
|
||||
];
|
||||
|
||||
cmakeFlags = [
|
||||
# TODO: all these are broken when cross compiling. Upstream has refactored
|
||||
# all the cmake infra for cross compilation, but it's not in a release yet
|
||||
(lib.cmakeOptionType "filepath" "WITH_LLVM_CONFIG" (
|
||||
lib.getExe' buildLlvmPackages.llvm.dev "llvm-config"
|
||||
))
|
||||
(lib.cmakeOptionType "filepath" "CLANG" (lib.getExe' buildLlvmPackages.clangUseLLVM "clang"))
|
||||
(lib.cmakeOptionType "filepath" "CLANGXX" (lib.getExe' buildLlvmPackages.clangUseLLVM "clang++"))
|
||||
(lib.cmakeOptionType "path" "CLANG_RESOURCE_DIR" "${llvmPackages.stdenv.cc}/resource-root")
|
||||
|
||||
(lib.cmakeBool "ENABLE_TESTS" finalAttrs.finalPackage.doCheck)
|
||||
|
||||
(lib.cmakeBool "ENABLE_RELOCATION" true)
|
||||
(lib.cmakeBool "ENABLE_POCL_BUILDING" true)
|
||||
(lib.cmakeBool "POCL_ICD_ABSOLUTE_PATH" true)
|
||||
|
||||
(lib.cmakeBool "ENABLE_TBB_DEVICE" enableTBB)
|
||||
(lib.cmakeBool "ENABLE_ICD" enableICD)
|
||||
(lib.cmakeBool "ENABLE_HWLOC" enableHWLOC)
|
||||
(lib.cmakeBool "ENABLE_LTTNG" enableLTTNG)
|
||||
|
||||
(lib.cmakeBool "ENABLE_REMOTE_CLIENT" enableRemoteClient)
|
||||
(lib.cmakeBool "ENABLE_REMOTE_SERVER" enableRemoteServer)
|
||||
|
||||
# avoid the runtime linker pulling in a different llvm e.g. from graphics drivers
|
||||
(lib.cmakeBool "STATIC_LLVM" staticLLVM)
|
||||
]
|
||||
++ lib.optionals (enableNOSV || enableOVNI) [
|
||||
(lib.cmakeBool "ENABLE_NOSV" enableNOSV)
|
||||
(lib.cmakeBool "ENABLE_OVNI" enableOVNI)
|
||||
]
|
||||
++ lib.optionals (!isCross && enableDistroVariants) [
|
||||
(lib.cmakeFeature "KERNELLIB_HOST_CPU_VARIANTS" "distro") # TODO: check if we can do it when cross compiling
|
||||
]
|
||||
++ lib.optionals isCross [
|
||||
(lib.cmakeFeature "CMAKE_SYSTEM_NAME" "Linux")
|
||||
(lib.cmakeFeature "CMAKE_FIND_ROOT_PATH_MODE_PROGRAM" "NEVER")
|
||||
(lib.cmakeFeature "CMAKE_FIND_ROOT_PATH_MODE_LIBRARY" "ONLY")
|
||||
(lib.cmakeFeature "CMAKE_FIND_ROOT_PATH_MODE_INCLUDE" "ONLY")
|
||||
(lib.cmakeFeature "CMAKE_FIND_ROOT_PATH_MODE_PACKAGE" "ONLY")
|
||||
]
|
||||
++ lib.optionals stdenv.hostPlatform.isRiscV [
|
||||
(lib.cmakeFeature "LLC_TRIPLE" "riscv64-unknown-linux-gnu")
|
||||
(lib.cmakeFeature "LLC_HOST_CPU" "rv64g")
|
||||
(lib.cmakeFeature "CLANG_MARCH_FLAG" "-march=")
|
||||
];
|
||||
|
||||
# Fixes error: ld: cannot find -lgcc / -lgcc_s when linking from libpocl on
|
||||
# host
|
||||
preConfigure = ''
|
||||
cmakeFlagsArray+=(
|
||||
-DEXTRA_HOST_LD_FLAGS="${lib.escapeShellArg (builtins.readFile "${targetPackages.stdenv.cc}/nix-support/cc-ldflags")}"
|
||||
-DEXTRA_KERNEL_FLAGS="${lib.escapeShellArg (builtins.readFile "${targetPackages.stdenv.cc}/nix-support/cc-ldflags")}"
|
||||
)
|
||||
'';
|
||||
|
||||
nativeBuildInputs = [
|
||||
cmake
|
||||
getconf
|
||||
ninja
|
||||
pkg-config
|
||||
python3
|
||||
];
|
||||
|
||||
buildInputs = [
|
||||
opencl-headers
|
||||
llvmPackages.libclang
|
||||
llvmPackages.llvm
|
||||
]
|
||||
++ lib.optionals staticLLVM [ libxml2 ]
|
||||
++ lib.optionals enableNOSV [ nosv ]
|
||||
++ lib.optionals enableOVNI [ ovni ]
|
||||
++ lib.optionals enableHWLOC [ hwloc ]
|
||||
++ lib.optionals enableTBB [ onetbb ]
|
||||
++ lib.optionals enableICD [ ocl-icd ]
|
||||
++ lib.optionals enableLTTNG [ lttng-ust ]
|
||||
++ lib.optionals enableSPIRV [
|
||||
(spirv-llvm-translator.override { inherit (llvmPackages) llvm; })
|
||||
spirv-tools
|
||||
];
|
||||
|
||||
nativeInstallCheckInputs = [
|
||||
writableTmpDirAsHomeHook # needed for POCL_CACHE_DIR
|
||||
];
|
||||
|
||||
doInstallCheck = true;
|
||||
|
||||
installCheckPhase = lib.optionalString enableICD ''
|
||||
runHook preInstallCheck
|
||||
|
||||
export OCL_ICD_VENDORS=$out/etc/OpenCL/vendors
|
||||
$out/bin/poclcc -o poclcc.cl.pocl $src/examples/poclcc/poclcc.cl
|
||||
|
||||
runHook postInstallCheck
|
||||
'';
|
||||
|
||||
setupHook = lib.optionalDrvAttr enableICD (
|
||||
writeText "setup-hook" ''
|
||||
addToSearchPath OCL_ICD_VENDORS @out@/etc/OpenCL/vendors
|
||||
''
|
||||
);
|
||||
|
||||
passthru =
|
||||
let
|
||||
self = finalAttrs.finalPackage;
|
||||
in
|
||||
{
|
||||
updateScript = nix-update-script { };
|
||||
git = self.override { useGit = true; };
|
||||
|
||||
withICD = enableICD;
|
||||
|
||||
test = {
|
||||
# Run builtin tests (causes a rebuild)
|
||||
self = self.overrideAttrs { doCheck = true; };
|
||||
|
||||
# Run basic test from Khronos OpenCL Conformance Test Suite
|
||||
# WARN: despite its name, test_basic is very exhaustive, and can take more
|
||||
# than 1 hour in a marenostrum5 node.
|
||||
cts =
|
||||
assert enableICD;
|
||||
lib.genAttrs [ "api" "basic" "c11_atomics" "printf" "svm" ] (
|
||||
name:
|
||||
runCommand "pocl-cts-test_${name}" {
|
||||
nativeBuildInputs = [ self ];
|
||||
requiredSystemFeatures = [ "sys-devices" ];
|
||||
env = {
|
||||
POCL_DEBUG = "error,warn";
|
||||
POCL_CACHE_DIR = "/build/pocl_cache";
|
||||
};
|
||||
} "${opencl-cts}/bin/Release/test_${name} | tee $out"
|
||||
);
|
||||
};
|
||||
};
|
||||
|
||||
env.HWLOC_SYNTHETIC = lib.optionalDrvAttr enableHWLOC "node:1 core:1 pu:1";
|
||||
|
||||
propagatedBuildInputs = [ stdenv.cc.cc ];
|
||||
|
||||
meta = with lib; {
|
||||
description = "A portable open source (MIT-licensed) implementation of the OpenCL standard";
|
||||
homepage = "http://portablecl.org";
|
||||
license = licenses.mit;
|
||||
maintainers = with maintainers; [
|
||||
leixb
|
||||
jansol
|
||||
xddxdd
|
||||
bsc.maintainers.abonerib
|
||||
];
|
||||
platforms = platforms.linux ++ platforms.darwin;
|
||||
};
|
||||
})
|
||||
@@ -1,58 +0,0 @@
|
||||
{
|
||||
stdenv,
|
||||
lib,
|
||||
fetchurl,
|
||||
ocl-icd,
|
||||
opencl-headers,
|
||||
}:
|
||||
|
||||
stdenv.mkDerivation {
|
||||
pname = "rodinia-opencl";
|
||||
version = "3.1";
|
||||
src = fetchurl {
|
||||
url = "http://www.cs.virginia.edu/~skadron/lava/Rodinia/Packages/rodinia_3.1.tar.bz2";
|
||||
hash = "sha256-+uusfBHtj4/Pa/LX6FwwhvwtEfciBNbfwo3FsujyrP0=";
|
||||
};
|
||||
|
||||
patches = [
|
||||
./rodinia-fixes.patch
|
||||
./rodinia-rm.patch
|
||||
];
|
||||
buildInputs = [
|
||||
opencl-headers
|
||||
ocl-icd
|
||||
];
|
||||
buildFlags = [
|
||||
"OPENCL"
|
||||
"--always-make"
|
||||
];
|
||||
|
||||
preBuild = ''
|
||||
mkdir -p bin/linux/{cuda,omp,opencl}
|
||||
'';
|
||||
|
||||
installPhase = ''
|
||||
runHook preInstall
|
||||
|
||||
mkdir -p $out/share
|
||||
cp -r bin data opencl $out
|
||||
cp LICENSE README $out/share
|
||||
|
||||
runHook postInstall
|
||||
'';
|
||||
|
||||
meta = {
|
||||
homepage = "https://rodinia.cs.virginia.edu/";
|
||||
description = "Test Suite of Compute-Intensive Applications with Accelerators";
|
||||
maintainers = with lib.maintainers.bsc; [ abonerib ];
|
||||
platforms = lib.platforms.linux;
|
||||
license = {
|
||||
deprecated = false;
|
||||
free = false;
|
||||
fullName = "Rodinia License";
|
||||
redistributable = true;
|
||||
shortName = "rodinia";
|
||||
url = "https://www.cs.virginia.edu/~skadron/lava/rodinia/license.htm";
|
||||
};
|
||||
};
|
||||
}
|
||||
File diff suppressed because it is too large
Load Diff
Some files were not shown because too many files have changed in this diff Show More
Reference in New Issue
Block a user