forked from rarias/jungle
MEGA MERGE
This commit is contained in:
parent
d7cd3cf077
85ba591ea7
39b65d8f96
129dfb1998
afdda0fb29
8aa336f990
1ed213243d
e1f8612979
2ace509cbe
9a7387289e
commit
b3c1e95ccb
@ -6,4 +6,10 @@
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"/sys/devices/system/cpu"
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"/sys/devices/system/cpu"
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"/sys/devices/system/node"
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"/sys/devices/system/node"
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];
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];
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# similar to cudaSupport, this can be used to activate certain features
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# conditionally.
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nixpkgs.overlays = [
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(final: prev: { sysDevicesSupport = true; })
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];
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}
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}
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43
overlay.nix
43
overlay.nix
@ -1,12 +1,18 @@
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final: /* Future last stage */
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final: /* Future last stage */
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prev: /* Previous stage */
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prev: /* Previous stage */
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with final.lib;
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let
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let
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inherit (prev) lib;
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inherit (lib) collect filterAttrs isDerivation mapAttrs;
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callPackage = final.callPackage;
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callPackage = final.callPackage;
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bscPkgs = {
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mkStrict = drv: if (isDerivation drv && drv ? overrideAttrs && !(drv ? strictDeps))
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then drv.overrideAttrs { strictDeps = true; }
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else drv;
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bscPkgs = mapAttrs (_: mkStrict) {
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# override stdenv to add a sentinel to know if a derivation comes
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# override stdenv to add a sentinel to know if a derivation comes
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# from unfree sources.
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# from unfree sources.
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@ -36,6 +42,9 @@ let
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agenix = prev.callPackage ./pkgs/agenix/default.nix { };
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agenix = prev.callPackage ./pkgs/agenix/default.nix { };
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amd-uprof = prev.callPackage ./pkgs/amd-uprof/default.nix { };
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amd-uprof = prev.callPackage ./pkgs/amd-uprof/default.nix { };
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aoccUnwrapped = callPackage ./pkgs/aocc/unwrapped.nix { };
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aocc = callPackage ./pkgs/aocc/default.nix { };
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stdenvAocc = final.overrideCC final.stdenv final.aocc;
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bench6 = callPackage ./pkgs/bench6/default.nix { };
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bench6 = callPackage ./pkgs/bench6/default.nix { };
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bigotes = callPackage ./pkgs/bigotes/default.nix { };
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bigotes = callPackage ./pkgs/bigotes/default.nix { };
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clangOmpss2 = callPackage ./pkgs/llvm-ompss2/default.nix { };
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clangOmpss2 = callPackage ./pkgs/llvm-ompss2/default.nix { };
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@ -44,9 +53,14 @@ let
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clangOmpss2NodesOmpv = callPackage ./pkgs/llvm-ompss2/default.nix { ompss2rt = final.nodes; openmp = final.openmpv; };
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clangOmpss2NodesOmpv = callPackage ./pkgs/llvm-ompss2/default.nix { ompss2rt = final.nodes; openmp = final.openmpv; };
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clangOmpss2Unwrapped = callPackage ./pkgs/llvm-ompss2/clang.nix { };
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clangOmpss2Unwrapped = callPackage ./pkgs/llvm-ompss2/clang.nix { };
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cudainfo = prev.callPackage ./pkgs/cudainfo/default.nix { };
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cudainfo = prev.callPackage ./pkgs/cudainfo/default.nix { };
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clsparse = callPackage ./pkgs/clsparse/package.nix { };
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#extrae = callPackage ./pkgs/extrae/default.nix { }; # Broken and outdated
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#extrae = callPackage ./pkgs/extrae/default.nix { }; # Broken and outdated
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gpi-2 = callPackage ./pkgs/gpi-2/default.nix { };
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gpi-2 = callPackage ./pkgs/gpi-2/default.nix { };
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intel-apt = callPackage ./pkgs/intel-oneapi/packages.nix { };
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intelPackages_2023 = callPackage ./pkgs/intel-oneapi/2023.nix { };
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intelPackages_2023 = callPackage ./pkgs/intel-oneapi/2023.nix { };
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intelPackages_2024 = final.intel-apt.hpckit_2024;
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intelPackages_2025 = final.intel-apt.hpckit_2025;
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intelPackages = final.intelPackages_2025;
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jemallocNanos6 = callPackage ./pkgs/nanos6/jemalloc.nix { };
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jemallocNanos6 = callPackage ./pkgs/nanos6/jemalloc.nix { };
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# FIXME: Extend this to all linuxPackages variants. Open problem, see:
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# FIXME: Extend this to all linuxPackages variants. Open problem, see:
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# https://discourse.nixos.org/t/whats-the-right-way-to-make-a-custom-kernel-module-available/4636
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# https://discourse.nixos.org/t/whats-the-right-way-to-make-a-custom-kernel-module-available/4636
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@ -69,12 +83,14 @@ let
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#nix-wrap = callPackage ./pkgs/nix-wrap/default.nix { };
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#nix-wrap = callPackage ./pkgs/nix-wrap/default.nix { };
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nodes = callPackage ./pkgs/nodes/default.nix { };
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nodes = callPackage ./pkgs/nodes/default.nix { };
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nosv = callPackage ./pkgs/nosv/default.nix { };
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nosv = callPackage ./pkgs/nosv/default.nix { };
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oneMath = callPackage ./pkgs/onemath/default.nix { };
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openmp = callPackage ./pkgs/llvm-ompss2/openmp.nix { monorepoSrc = final.clangOmpss2Unwrapped.src; version = final.clangOmpss2Unwrapped.version; };
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openmp = callPackage ./pkgs/llvm-ompss2/openmp.nix { monorepoSrc = final.clangOmpss2Unwrapped.src; version = final.clangOmpss2Unwrapped.version; };
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openmpv = final.openmp.override { enableNosv = true; enableOvni = true; };
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openmpv = final.openmp.override { enableNosv = true; enableOvni = true; };
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osumb = callPackage ./pkgs/osu/default.nix { };
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osumb = callPackage ./pkgs/osu/default.nix { };
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ovni = callPackage ./pkgs/ovni/default.nix { };
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ovni = callPackage ./pkgs/ovni/default.nix { };
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ovniGit = final.ovni.override { useGit = true; };
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ovniGit = final.ovni.override { useGit = true; };
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paraverKernel = callPackage ./pkgs/paraver/kernel.nix { };
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paraverKernel = callPackage ./pkgs/paraver/kernel.nix { };
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pocl = callPackage ./pkgs/pocl/default.nix { };
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prometheus-slurm-exporter = prev.callPackage ./pkgs/slurm-exporter/default.nix { };
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prometheus-slurm-exporter = prev.callPackage ./pkgs/slurm-exporter/default.nix { };
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#pscom = callPackage ./pkgs/parastation/pscom.nix { }; # Unmaintaned
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#pscom = callPackage ./pkgs/parastation/pscom.nix { }; # Unmaintaned
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#psmpi = callPackage ./pkgs/parastation/psmpi.nix { }; # Unmaintaned
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#psmpi = callPackage ./pkgs/parastation/psmpi.nix { }; # Unmaintaned
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@ -84,10 +100,16 @@ let
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stdenvClangOmpss2Nanos6 = final.stdenv.override { cc = final.clangOmpss2Nanos6; allowedRequisites = null; };
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stdenvClangOmpss2Nanos6 = final.stdenv.override { cc = final.clangOmpss2Nanos6; allowedRequisites = null; };
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stdenvClangOmpss2Nodes = final.stdenv.override { cc = final.clangOmpss2Nodes; allowedRequisites = null; };
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stdenvClangOmpss2Nodes = final.stdenv.override { cc = final.clangOmpss2Nodes; allowedRequisites = null; };
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stdenvClangOmpss2NodesOmpv = final.stdenv.override { cc = final.clangOmpss2NodesOmpv; allowedRequisites = null; };
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stdenvClangOmpss2NodesOmpv = final.stdenv.override { cc = final.clangOmpss2NodesOmpv; allowedRequisites = null; };
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tacuda = callPackage ./pkgs/tacuda/default.nix { };
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tagaspi = callPackage ./pkgs/tagaspi/default.nix { };
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tagaspi = callPackage ./pkgs/tagaspi/default.nix { };
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tampi = callPackage ./pkgs/tampi/default.nix { };
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tampi = callPackage ./pkgs/tampi/default.nix { };
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tasycl = callPackage ./pkgs/tasycl/default.nix { };
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tasycl-acpp = callPackage ./pkgs/tasycl/default.nix { useIntel = false; };
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upc-qaire-exporter = prev.callPackage ./pkgs/upc-qaire-exporter/default.nix { };
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upc-qaire-exporter = prev.callPackage ./pkgs/upc-qaire-exporter/default.nix { };
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taopencl = callPackage ./pkgs/taopencl/default.nix { };
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wxparaver = callPackage ./pkgs/paraver/default.nix { };
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wxparaver = callPackage ./pkgs/paraver/default.nix { };
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gromacs = callPackage ./pkgs/gromacs/default.nix { enableSYCL = true; };
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};
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};
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tests = rec {
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tests = rec {
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@ -95,6 +117,8 @@ let
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#sigsegv = callPackage ./test/reproducers/sigsegv.nix { };
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#sigsegv = callPackage ./test/reproducers/sigsegv.nix { };
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hello-c = callPackage ./test/compilers/hello-c.nix { };
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hello-c = callPackage ./test/compilers/hello-c.nix { };
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hello-cpp = callPackage ./test/compilers/hello-cpp.nix { };
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hello-cpp = callPackage ./test/compilers/hello-cpp.nix { };
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hello-sycl = callPackage ./test/compilers/hello-sycl.nix { };
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hello-syclompss = callPackage ./test/compilers/icpx-ompss2.nix { };
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lto = callPackage ./test/compilers/lto.nix { };
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lto = callPackage ./test/compilers/lto.nix { };
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asan = callPackage ./test/compilers/asan.nix { };
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asan = callPackage ./test/compilers/asan.nix { };
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intel2023-icx-c = hello-c.override { stdenv = final.intelPackages_2023.stdenv; };
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intel2023-icx-c = hello-c.override { stdenv = final.intelPackages_2023.stdenv; };
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@ -104,6 +128,13 @@ let
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intel2023-ifort = callPackage ./test/compilers/hello-f.nix {
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intel2023-ifort = callPackage ./test/compilers/hello-f.nix {
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stdenv = final.intelPackages_2023.stdenv-ifort;
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stdenv = final.intelPackages_2023.stdenv-ifort;
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};
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};
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intel2024-icx-c = hello-c.override { stdenv = final.intelPackages_2024.stdenv; };
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intel2025-icx-c = hello-c.override { stdenv = final.intelPackages_2025.stdenv; };
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intel2024-icx-cpp = hello-cpp.override { stdenv = final.intelPackages_2024.stdenv; };
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intel2025-icx-cpp = hello-cpp.override { stdenv = final.intelPackages_2025.stdenv; };
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# intel2023-sycl = hello-sycl.override { intelPackages = final.intelPackages_2023; }; # broken
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intel2024-sycl = hello-sycl.override { intelPackages = final.intelPackages_2024; };
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intel2025-sycl = hello-sycl.override { intelPackages = final.intelPackages_2025; };
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clangOmpss2-lto = lto.override { stdenv = final.stdenvClangOmpss2Nanos6; };
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clangOmpss2-lto = lto.override { stdenv = final.stdenvClangOmpss2Nanos6; };
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clangOmpss2-asan = asan.override { stdenv = final.stdenvClangOmpss2Nanos6; };
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clangOmpss2-asan = asan.override { stdenv = final.stdenvClangOmpss2Nanos6; };
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clangOmpss2-task = callPackage ./test/compilers/ompss2.nix {
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clangOmpss2-task = callPackage ./test/compilers/ompss2.nix {
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@ -121,6 +152,8 @@ let
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clangNosvOmpv-ld = callPackage ./test/compilers/clang-openmp-ld.nix {
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clangNosvOmpv-ld = callPackage ./test/compilers/clang-openmp-ld.nix {
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stdenv = final.stdenvClangOmpss2NodesOmpv;
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stdenv = final.stdenvClangOmpss2NodesOmpv;
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};
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};
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pocl = callPackage ./test/compilers/pocl.nix { };
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};
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};
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# For now, only build toplevel packages in CI/Hydra
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# For now, only build toplevel packages in CI/Hydra
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@ -131,7 +164,7 @@ let
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(isDerivation pkg) &&
|
(isDerivation pkg) &&
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# Must be defined explicitly
|
# Must be defined explicitly
|
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(pkg.meta.cross or false) &&
|
(pkg.meta.cross or false) &&
|
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(meta.availableOn platform pkg);
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(lib.meta.availableOn platform pkg);
|
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|
|
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# For now only RISC-V
|
# For now only RISC-V
|
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crossSet = { riscv64 = final.pkgsCross.riscv64.bsc.pkgsTopLevel; };
|
crossSet = { riscv64 = final.pkgsCross.riscv64.bsc.pkgsTopLevel; };
|
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@ -153,7 +186,7 @@ let
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allList = buildList' "ci-all" [ pkgsList testsList ];
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allList = buildList' "ci-all" [ pkgsList testsList ];
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# For now only RISC-V
|
# For now only RISC-V
|
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crossList = buildList "ci-cross"
|
crossList = buildList "ci-cross"
|
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(filter
|
(lib.filter
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(canCrossCompile final.pkgsCross.riscv64.stdenv.hostPlatform)
|
(canCrossCompile final.pkgsCross.riscv64.stdenv.hostPlatform)
|
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(builtins.attrValues crossSet.riscv64));
|
(builtins.attrValues crossSet.riscv64));
|
||||||
|
|
||||||
|
|||||||
16
pkgs/aocc/default.nix
Normal file
16
pkgs/aocc/default.nix
Normal file
@ -0,0 +1,16 @@
|
|||||||
|
{ wrapCCWith
|
||||||
|
, aoccUnwrapped
|
||||||
|
}:
|
||||||
|
|
||||||
|
let
|
||||||
|
cc = aoccUnwrapped;
|
||||||
|
in wrapCCWith {
|
||||||
|
inherit cc;
|
||||||
|
|
||||||
|
extraBuildCommands = ''
|
||||||
|
echo "-isystem ${cc}/include" >> $out/nix-support/cc-cflags
|
||||||
|
|
||||||
|
wrap aocc $wrapper $ccPath/clang
|
||||||
|
wrap aocc++ $wrapper $ccPath/clang++
|
||||||
|
'';
|
||||||
|
}
|
||||||
51
pkgs/aocc/unwrapped.nix
Normal file
51
pkgs/aocc/unwrapped.nix
Normal file
@ -0,0 +1,51 @@
|
|||||||
|
{ lib
|
||||||
|
, fetchurl
|
||||||
|
, stdenv
|
||||||
|
, autoPatchelfHook
|
||||||
|
, rocmPackages
|
||||||
|
, zlib
|
||||||
|
, libffi
|
||||||
|
, elfutils
|
||||||
|
}:
|
||||||
|
|
||||||
|
let
|
||||||
|
# in newer nixpkgs the runtime is hsakmt
|
||||||
|
rocmRuntime =
|
||||||
|
if rocmPackages ? hsakmt then
|
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|
rocmPackages.hsakmt
|
||||||
|
else
|
||||||
|
rocmPackages.rocm-runtime;
|
||||||
|
in
|
||||||
|
stdenv.mkDerivation {
|
||||||
|
pname = "aocc-compiler";
|
||||||
|
version = "5.0.0";
|
||||||
|
|
||||||
|
src = fetchurl {
|
||||||
|
url = "https://download.amd.com/developer/eula/aocc/aocc-5-0/aocc-compiler-5.0.0.tar";
|
||||||
|
sha256 = "sha256-lm+sLSx1np3m6WnBCtp6ezBsET9/HgfqN2gp7IY4Dao=";
|
||||||
|
};
|
||||||
|
|
||||||
|
nativeBuildInputs = [ autoPatchelfHook ];
|
||||||
|
buildInputs = [
|
||||||
|
elfutils
|
||||||
|
zlib
|
||||||
|
rocmRuntime
|
||||||
|
stdenv.cc.cc.lib
|
||||||
|
];
|
||||||
|
phases = [ "unpackPhase" "installPhase" "fixupPhase" ];
|
||||||
|
dontStrip = true;
|
||||||
|
|
||||||
|
installPhase = ''
|
||||||
|
mkdir -p $out
|
||||||
|
cp -a . $out/
|
||||||
|
|
||||||
|
ln -s ${lib.getLib libffi}/lib/libffi.so $out/lib/libffi.so.6
|
||||||
|
'';
|
||||||
|
|
||||||
|
passthru = {
|
||||||
|
inherit rocmRuntime;
|
||||||
|
isClang = true; # Needed for wrapCCWith
|
||||||
|
};
|
||||||
|
|
||||||
|
meta.mainProgram = "clang";
|
||||||
|
}
|
||||||
53
pkgs/clsparse/install_target.patch
Normal file
53
pkgs/clsparse/install_target.patch
Normal file
@ -0,0 +1,53 @@
|
|||||||
|
diff --git a/CMakeLists.txt b/CMakeLists.txt
|
||||||
|
index 3d139ed..15ffc14 100644
|
||||||
|
--- a/CMakeLists.txt
|
||||||
|
+++ b/CMakeLists.txt
|
||||||
|
@@ -176,32 +179,22 @@ if( BUILD_clSPARSE OR BUILD_SAMPLES )
|
||||||
|
if( BUILD_clSPARSE )
|
||||||
|
message( STATUS "Setting up clSPARSE external..." )
|
||||||
|
|
||||||
|
- if ( BUILD_SAMPLES )
|
||||||
|
- # If the user elects to build samples, then we must build and install clSPARSE
|
||||||
|
- # The install location is set as a subdirectory of the SuperBuild
|
||||||
|
- ExternalProject_Add(
|
||||||
|
- clSPARSE
|
||||||
|
- DEPENDS ${clSPARSE.Dependencies}
|
||||||
|
- SOURCE_DIR ${PROJECT_SOURCE_DIR}/src
|
||||||
|
- BINARY_DIR clSPARSE-build
|
||||||
|
- INSTALL_DIR clSPARSE-package
|
||||||
|
- CMAKE_ARGS ${clSPARSE.Cmake.Args} -DCMAKE_BUILD_TYPE=${CMAKE_BUILD_TYPE}
|
||||||
|
- -DBUILD_CLVERSION=${BUILD_CLVERSION} -DCMAKE_INSTALL_PREFIX=<INSTALL_DIR>
|
||||||
|
- -DUSE_SYSTEM_CL2HPP:BOOL=${USE_SYSTEM_CL2HPP}
|
||||||
|
- )
|
||||||
|
- else( )
|
||||||
|
- # If the user does not want to build samples, then build clSPARSE but don't automatically
|
||||||
|
- # install it
|
||||||
|
- ExternalProject_Add(
|
||||||
|
- clSPARSE
|
||||||
|
- DEPENDS ${clSPARSE.Dependencies}
|
||||||
|
- SOURCE_DIR ${PROJECT_SOURCE_DIR}/src
|
||||||
|
- BINARY_DIR clSPARSE-build
|
||||||
|
- CMAKE_ARGS ${clSPARSE.Cmake.Args} -DCMAKE_BUILD_TYPE=${CMAKE_BUILD_TYPE}
|
||||||
|
- -DBUILD_CLVERSION=${BUILD_CLVERSION} -DUSE_SYSTEM_CL2HPP:BOOL=${USE_SYSTEM_CL2HPP}
|
||||||
|
- INSTALL_COMMAND ""
|
||||||
|
- )
|
||||||
|
- endif( )
|
||||||
|
+ ExternalProject_Add(
|
||||||
|
+ clSPARSE
|
||||||
|
+ DEPENDS ${clSPARSE.Dependencies}
|
||||||
|
+ SOURCE_DIR ${PROJECT_SOURCE_DIR}/src
|
||||||
|
+ BINARY_DIR clSPARSE-build
|
||||||
|
+ INSTALL_DIR clSPARSE-package
|
||||||
|
+ CMAKE_ARGS ${clSPARSE.Cmake.Args} -DCMAKE_BUILD_TYPE=${CMAKE_BUILD_TYPE}
|
||||||
|
+ -DBUILD_CLVERSION=${BUILD_CLVERSION} -DCMAKE_INSTALL_PREFIX=<INSTALL_DIR>
|
||||||
|
+ -DUSE_SYSTEM_CL2HPP:BOOL=${USE_SYSTEM_CL2HPP}
|
||||||
|
+ )
|
||||||
|
+
|
||||||
|
+ install(
|
||||||
|
+ DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/clSPARSE-package/
|
||||||
|
+ DESTINATION ${CMAKE_INSTALL_PREFIX}
|
||||||
|
+ USE_SOURCE_PERMISSIONS
|
||||||
|
+ )
|
||||||
|
|
||||||
|
endif( )
|
||||||
|
|
||||||
70
pkgs/clsparse/package.nix
Normal file
70
pkgs/clsparse/package.nix
Normal file
@ -0,0 +1,70 @@
|
|||||||
|
{
|
||||||
|
lib,
|
||||||
|
stdenv,
|
||||||
|
fetchFromGitHub,
|
||||||
|
fetchpatch,
|
||||||
|
boost,
|
||||||
|
gtest,
|
||||||
|
ocl-icd,
|
||||||
|
opencl-headers,
|
||||||
|
opencl-clhpp,
|
||||||
|
cmake,
|
||||||
|
}:
|
||||||
|
|
||||||
|
stdenv.mkDerivation rec {
|
||||||
|
pname = "clsparse";
|
||||||
|
version = "0.10.2.0";
|
||||||
|
|
||||||
|
src = fetchFromGitHub {
|
||||||
|
owner = "clMathLibraries";
|
||||||
|
repo = "clSPARSE";
|
||||||
|
rev = "v${version}";
|
||||||
|
hash = "sha256-jIauCtUyPEIx7pFI3qH0WagV+t/fvro0OsGgONBJm0s=";
|
||||||
|
};
|
||||||
|
|
||||||
|
patches = [
|
||||||
|
./pass_include_dir.patch
|
||||||
|
./install_target.patch
|
||||||
|
(fetchpatch {
|
||||||
|
name = "remove-gettypecode.patch";
|
||||||
|
url = "https://patch-diff.githubusercontent.com/raw/clMathLibraries/clSPARSE/pull/210.patch";
|
||||||
|
hash = "sha256-9Q+tk7RMdWE4MCnbvWlsI0MIgBYKIWR2jIC1bICtIjU=";
|
||||||
|
})
|
||||||
|
];
|
||||||
|
|
||||||
|
postInstallPhase = ''
|
||||||
|
mv $installDir/lib64 lib
|
||||||
|
ln -s lib/ lib64
|
||||||
|
'';
|
||||||
|
|
||||||
|
env.NIX_CFLAGS_COMPILE = "-std=c++17";
|
||||||
|
|
||||||
|
nativeBuildInputs = [
|
||||||
|
cmake
|
||||||
|
];
|
||||||
|
|
||||||
|
buildInputs = [
|
||||||
|
boost
|
||||||
|
ocl-icd
|
||||||
|
opencl-headers
|
||||||
|
opencl-clhpp
|
||||||
|
];
|
||||||
|
|
||||||
|
cmakeFlags = [
|
||||||
|
"-DBUILD_Boost=OFF"
|
||||||
|
"-DBUILD_gMock=OFF"
|
||||||
|
"-DBUILD_MTX=OFF"
|
||||||
|
"-DBUILD_SAMPLES=OFF"
|
||||||
|
"-DUSE_SYSTEM_CL2HPP=ON"
|
||||||
|
"-DGMOCK_ROOT=${gtest}"
|
||||||
|
"-DGTEST_INCLUDE_DIR=${gtest.src}/googletest/include"
|
||||||
|
];
|
||||||
|
|
||||||
|
meta = {
|
||||||
|
description = "A software library containing Sparse functions written in OpenCL";
|
||||||
|
homepage = "https://github.com/clMathLibraries/clSPARSE";
|
||||||
|
license = lib.licenses.asl20;
|
||||||
|
maintainers = with lib.maintainers; [ leixb ];
|
||||||
|
platforms = lib.platforms.all;
|
||||||
|
};
|
||||||
|
}
|
||||||
14
pkgs/clsparse/pass_include_dir.patch
Normal file
14
pkgs/clsparse/pass_include_dir.patch
Normal file
@ -0,0 +1,14 @@
|
|||||||
|
diff --git a/CMakeLists.txt b/CMakeLists.txt
|
||||||
|
index 3d139ed..b7ea2d3 100644
|
||||||
|
--- a/CMakeLists.txt
|
||||||
|
+++ b/CMakeLists.txt
|
||||||
|
@@ -132,6 +132,9 @@ else( )
|
||||||
|
set( GMOCK_ROOT "$ENV{GMOCK_ROOT}" )
|
||||||
|
endif( )
|
||||||
|
list( APPEND clSPARSE.Cmake.Args -DGTEST_ROOT=${GMOCK_ROOT} )
|
||||||
|
+ if( DEFINED GTEST_INCLUDE_DIR )
|
||||||
|
+ list( APPEND clSPARSE.Cmake.Args -DGTEST_INCLUDE_DIR=${GTEST_INCLUDE_DIR} )
|
||||||
|
+ endif( )
|
||||||
|
endif( )
|
||||||
|
endif( )
|
||||||
|
|
||||||
191
pkgs/gromacs/default.nix
Normal file
191
pkgs/gromacs/default.nix
Normal file
@ -0,0 +1,191 @@
|
|||||||
|
{
|
||||||
|
lib,
|
||||||
|
stdenv,
|
||||||
|
fetchurl,
|
||||||
|
cmake,
|
||||||
|
hwloc,
|
||||||
|
fftw,
|
||||||
|
perl,
|
||||||
|
blas,
|
||||||
|
lapack,
|
||||||
|
llvmPackages,
|
||||||
|
intelPackages ? null,
|
||||||
|
mpi,
|
||||||
|
cudaPackages,
|
||||||
|
plumed,
|
||||||
|
singlePrec ? true,
|
||||||
|
config,
|
||||||
|
enableSYCL ? false,
|
||||||
|
enableCuda ? config.cudaSupport,
|
||||||
|
enableMpi ? false,
|
||||||
|
enablePlumed ? false,
|
||||||
|
cpuAcceleration ? null,
|
||||||
|
}:
|
||||||
|
|
||||||
|
# CUDA is only implemented for single precission
|
||||||
|
assert enableCuda -> singlePrec;
|
||||||
|
|
||||||
|
assert !(enableSYCL && enableCuda);
|
||||||
|
|
||||||
|
assert enableSYCL -> intelPackages != null;
|
||||||
|
|
||||||
|
let
|
||||||
|
inherit (cudaPackages.flags) cmakeCudaArchitecturesString;
|
||||||
|
|
||||||
|
# Select reasonable defaults for all major platforms
|
||||||
|
# The possible values are defined in CMakeLists.txt:
|
||||||
|
# AUTO None SSE2 SSE4.1 AVX_128_FMA AVX_256 AVX2_256
|
||||||
|
# AVX2_128 AVX_512 AVX_512_KNL MIC ARM_NEON ARM_NEON_ASIMD
|
||||||
|
SIMD =
|
||||||
|
x:
|
||||||
|
if (cpuAcceleration != null) then
|
||||||
|
x
|
||||||
|
else if stdenv.hostPlatform.system == "i686-linux" then
|
||||||
|
"SSE2"
|
||||||
|
else if stdenv.hostPlatform.system == "x86_64-linux" then
|
||||||
|
"SSE4.1"
|
||||||
|
else if stdenv.hostPlatform.system == "x86_64-darwin" then
|
||||||
|
"SSE4.1"
|
||||||
|
else if stdenv.hostPlatform.system == "aarch64-linux" then
|
||||||
|
"ARM_NEON_ASIMD"
|
||||||
|
else
|
||||||
|
"None";
|
||||||
|
|
||||||
|
source =
|
||||||
|
if enablePlumed then
|
||||||
|
{
|
||||||
|
version = "2024.2";
|
||||||
|
hash = "sha256-gCp+M18uiVdw9XsVnk7DaOuw/yzm2sz3BsboAlw2hSs=";
|
||||||
|
}
|
||||||
|
else
|
||||||
|
{
|
||||||
|
version = "2025.3";
|
||||||
|
hash = "sha256-i9/KAmjz8Qp8o8BuWbYvc+oCQgxnIRwP85EvMteDPGU=";
|
||||||
|
};
|
||||||
|
|
||||||
|
stdenv' =
|
||||||
|
if enableSYCL then intelPackages.stdenv else stdenv;
|
||||||
|
|
||||||
|
in
|
||||||
|
stdenv'.mkDerivation rec {
|
||||||
|
pname = "gromacs";
|
||||||
|
version = source.version;
|
||||||
|
|
||||||
|
src = fetchurl {
|
||||||
|
url = "ftp://ftp.gromacs.org/pub/gromacs/gromacs-${version}.tar.gz";
|
||||||
|
inherit (source) hash;
|
||||||
|
};
|
||||||
|
|
||||||
|
patches = [ (if enablePlumed then ./pkgconfig-2024.patch else ./pkgconfig-2025.patch) ];
|
||||||
|
|
||||||
|
postPatch = lib.optionalString enablePlumed ''
|
||||||
|
plumed patch -p -e gromacs-${source.version}
|
||||||
|
'';
|
||||||
|
|
||||||
|
outputs = [
|
||||||
|
"out"
|
||||||
|
"dev"
|
||||||
|
"man"
|
||||||
|
];
|
||||||
|
|
||||||
|
nativeBuildInputs = [
|
||||||
|
cmake
|
||||||
|
]
|
||||||
|
++ lib.optional enablePlumed plumed
|
||||||
|
++ lib.optionals enableCuda [ cudaPackages.cuda_nvcc ];
|
||||||
|
|
||||||
|
env.MKLROOT = intelPackages.mkl;
|
||||||
|
|
||||||
|
buildInputs = [
|
||||||
|
fftw
|
||||||
|
perl
|
||||||
|
hwloc
|
||||||
|
blas
|
||||||
|
lapack
|
||||||
|
]
|
||||||
|
++ lib.optional enableMpi mpi
|
||||||
|
++ lib.optionals enableCuda [
|
||||||
|
cudaPackages.cuda_cccl
|
||||||
|
cudaPackages.cuda_cudart
|
||||||
|
cudaPackages.libcufft
|
||||||
|
cudaPackages.cuda_profiler_api
|
||||||
|
]
|
||||||
|
++ lib.optional stdenv.hostPlatform.isDarwin llvmPackages.openmp;
|
||||||
|
|
||||||
|
propagatedBuildInputs = lib.optional enableMpi mpi;
|
||||||
|
propagatedUserEnvPkgs = lib.optional enableMpi mpi;
|
||||||
|
|
||||||
|
cmakeFlags = [
|
||||||
|
(lib.cmakeBool "GMX_HWLOC" true)
|
||||||
|
"-DGMX_SIMD:STRING=${SIMD cpuAcceleration}"
|
||||||
|
"-DGMX_OPENMP:BOOL=TRUE"
|
||||||
|
"-DBUILD_SHARED_LIBS=ON"
|
||||||
|
]
|
||||||
|
++ (
|
||||||
|
if singlePrec then
|
||||||
|
[
|
||||||
|
"-DGMX_DOUBLE=OFF"
|
||||||
|
]
|
||||||
|
else
|
||||||
|
[
|
||||||
|
"-DGMX_DOUBLE=ON"
|
||||||
|
"-DGMX_DEFAULT_SUFFIX=OFF"
|
||||||
|
]
|
||||||
|
)
|
||||||
|
++ (
|
||||||
|
if enableMpi then
|
||||||
|
[
|
||||||
|
"-DGMX_MPI:BOOL=TRUE"
|
||||||
|
"-DGMX_THREAD_MPI:BOOL=FALSE"
|
||||||
|
]
|
||||||
|
else
|
||||||
|
[
|
||||||
|
"-DGMX_MPI:BOOL=FALSE"
|
||||||
|
]
|
||||||
|
)
|
||||||
|
++ (lib.optionals enableSYCL [
|
||||||
|
"-DGMX_GPU=SYCL"
|
||||||
|
"-DGMX_OPENMP=OFF" # TODO: enable OpenMP with SYCL?
|
||||||
|
])
|
||||||
|
++ lib.optionals enableCuda [
|
||||||
|
"-DGMX_GPU=CUDA"
|
||||||
|
(lib.cmakeFeature "CMAKE_CUDA_ARCHITECTURES" cmakeCudaArchitecturesString)
|
||||||
|
|
||||||
|
# Gromacs seems to ignore and override the normal variables, so we add this ad hoc:
|
||||||
|
(lib.cmakeFeature "GMX_CUDA_TARGET_COMPUTE" cmakeCudaArchitecturesString)
|
||||||
|
];
|
||||||
|
|
||||||
|
postInstall = ''
|
||||||
|
moveToOutput share/cmake $dev
|
||||||
|
'';
|
||||||
|
|
||||||
|
meta = with lib; {
|
||||||
|
homepage = "https://www.gromacs.org";
|
||||||
|
license = licenses.lgpl21Plus;
|
||||||
|
description = "Molecular dynamics software package";
|
||||||
|
longDescription = ''
|
||||||
|
GROMACS is a versatile package to perform molecular dynamics,
|
||||||
|
i.e. simulate the Newtonian equations of motion for systems
|
||||||
|
with hundreds to millions of particles.
|
||||||
|
|
||||||
|
It is primarily designed for biochemical molecules like
|
||||||
|
proteins, lipids and nucleic acids that have a lot of
|
||||||
|
complicated bonded interactions, but since GROMACS is
|
||||||
|
extremely fast at calculating the nonbonded interactions (that
|
||||||
|
usually dominate simulations) many groups are also using it
|
||||||
|
for research on non-biological systems, e.g. polymers.
|
||||||
|
|
||||||
|
GROMACS supports all the usual algorithms you expect from a
|
||||||
|
modern molecular dynamics implementation, (check the online
|
||||||
|
reference or manual for details), but there are also quite a
|
||||||
|
few features that make it stand out from the competition.
|
||||||
|
|
||||||
|
See: https://www.gromacs.org/about.html for details.
|
||||||
|
'';
|
||||||
|
platforms = platforms.unix;
|
||||||
|
maintainers = with maintainers; [
|
||||||
|
sheepforce
|
||||||
|
markuskowa
|
||||||
|
];
|
||||||
|
};
|
||||||
|
}
|
||||||
24
pkgs/gromacs/pkgconfig-2024.patch
Normal file
24
pkgs/gromacs/pkgconfig-2024.patch
Normal file
@ -0,0 +1,24 @@
|
|||||||
|
diff --git a/src/external/muparser/muparser.pc.in b/src/external/muparser/muparser.pc.in
|
||||||
|
index 646787cb53..9b97ad57f7 100644
|
||||||
|
--- a/src/external/muparser/muparser.pc.in
|
||||||
|
+++ b/src/external/muparser/muparser.pc.in
|
||||||
|
@@ -1,7 +1,5 @@
|
||||||
|
-prefix=@CMAKE_INSTALL_PREFIX@
|
||||||
|
-exec_prefix=${prefix}
|
||||||
|
-libdir=${prefix}/@CMAKE_INSTALL_LIBDIR@
|
||||||
|
-includedir=${prefix}/@CMAKE_INSTALL_INCLUDEDIR@
|
||||||
|
+libdir=@CMAKE_INSTALL_FULL_LIBDIR@
|
||||||
|
+includedir=@CMAKE_INSTALL_FULL_INCLUDEDIR@
|
||||||
|
|
||||||
|
Name: @PACKAGE_NAME@
|
||||||
|
Description: Mathematical expressions parser library
|
||||||
|
diff --git a/src/gromacs/libgromacs.pc.cmakein b/src/gromacs/libgromacs.pc.cmakein
|
||||||
|
index ec1ed6684e..ca1105474a 100644
|
||||||
|
--- a/src/gromacs/libgromacs.pc.cmakein
|
||||||
|
+++ b/src/gromacs/libgromacs.pc.cmakein
|
||||||
|
@@ -1,4 +1,4 @@
|
||||||
|
-libdir=@CMAKE_INSTALL_PREFIX@/@CMAKE_INSTALL_LIBDIR@
|
||||||
|
+libdir=@CMAKE_INSTALL_FULL_LIBDIR@
|
||||||
|
|
||||||
|
Name: libgromacs@GMX_LIBS_SUFFIX@
|
||||||
|
Description: Gromacs library
|
||||||
36
pkgs/gromacs/pkgconfig-2025.patch
Normal file
36
pkgs/gromacs/pkgconfig-2025.patch
Normal file
@ -0,0 +1,36 @@
|
|||||||
|
diff --git a/src/external/muparser/muparser.pc.in b/src/external/muparser/muparser.pc.in
|
||||||
|
index 646787cb53..d26e84de8f 100644
|
||||||
|
--- a/src/external/muparser/muparser.pc.in
|
||||||
|
+++ b/src/external/muparser/muparser.pc.in
|
||||||
|
@@ -1,11 +1,9 @@
|
||||||
|
-prefix=@CMAKE_INSTALL_PREFIX@
|
||||||
|
-exec_prefix=${prefix}
|
||||||
|
-libdir=${prefix}/@CMAKE_INSTALL_LIBDIR@
|
||||||
|
-includedir=${prefix}/@CMAKE_INSTALL_INCLUDEDIR@
|
||||||
|
-
|
||||||
|
-Name: @PACKAGE_NAME@
|
||||||
|
-Description: Mathematical expressions parser library
|
||||||
|
-Version: @MUPARSER_VERSION@
|
||||||
|
-Requires:
|
||||||
|
-Libs: -L${libdir} -lmuparser
|
||||||
|
-Cflags: -I${includedir} @PKG_CONFIG_FLAGS@
|
||||||
|
+libdir=@CMAKE_INSTALL_FULL_LIBDIR@
|
||||||
|
+includedir=@CMAKE_INSTALL_FULL_INCLUDEDIR@
|
||||||
|
+
|
||||||
|
+Name: @PACKAGE_NAME@
|
||||||
|
+Description: Mathematical expressions parser library
|
||||||
|
+Version: @MUPARSER_VERSION@
|
||||||
|
+Requires:
|
||||||
|
+Libs: -L${libdir} -lmuparser
|
||||||
|
+Cflags: -I${includedir} @PKG_CONFIG_FLAGS@
|
||||||
|
diff --git a/src/gromacs/libgromacs.pc.cmakein b/src/gromacs/libgromacs.pc.cmakein
|
||||||
|
index af9b5a6dc0..5f58d549bf 100644
|
||||||
|
--- a/src/gromacs/libgromacs.pc.cmakein
|
||||||
|
+++ b/src/gromacs/libgromacs.pc.cmakein
|
||||||
|
@@ -1,5 +1,4 @@
|
||||||
|
-prefix=@CMAKE_INSTALL_PREFIX@
|
||||||
|
-libdir=${prefix}/@CMAKE_INSTALL_LIBDIR@
|
||||||
|
+libdir=@CMAKE_INSTALL_FULL_LIBDIR@
|
||||||
|
|
||||||
|
Name: libgromacs@GMX_LIBS_SUFFIX@
|
||||||
|
Description: Gromacs library
|
||||||
@ -42,49 +42,19 @@ let
|
|||||||
mpi = "2021.9.0";
|
mpi = "2021.9.0";
|
||||||
};
|
};
|
||||||
|
|
||||||
aptPackageIndex = stdenv.mkDerivation {
|
findMatch = name:
|
||||||
name = "intel-oneapi-packages";
|
|
||||||
srcs = [
|
|
||||||
# Run update.sh to update the package lists
|
|
||||||
./amd64-packages ./all-packages
|
|
||||||
];
|
|
||||||
phases = [ "installPhase" ];
|
|
||||||
installPhase = ''
|
|
||||||
runHook preInstall
|
|
||||||
|
|
||||||
awk -F': ' '\
|
|
||||||
BEGIN { print "[ {" } \
|
|
||||||
NR>1 && /^Package: / { print "} {"; } \
|
|
||||||
/: / { printf "%s = \"%s\";\n", $1, $2 } \
|
|
||||||
END { print "} ]" }' $srcs > $out
|
|
||||||
|
|
||||||
runHook postInstall
|
|
||||||
'';
|
|
||||||
};
|
|
||||||
|
|
||||||
aptPackages = import aptPackageIndex;
|
|
||||||
|
|
||||||
apthost = "https://apt.repos.intel.com/oneapi/";
|
|
||||||
|
|
||||||
getSum = pkgList: name:
|
|
||||||
let
|
let
|
||||||
matches = lib.filter (x: name == x.Package) pkgList;
|
aptPackages = builtins.fromJSON (builtins.readFile ./packages.json);
|
||||||
#n = lib.length matches;
|
matches = lib.filter (x: name == x.pname) aptPackages;
|
||||||
#match = builtins.trace (name + " -- ${builtins.toString n}") (lib.elemAt matches 0);
|
|
||||||
match = lib.elemAt matches 0;
|
|
||||||
in
|
|
||||||
match.SHA256;
|
|
||||||
|
|
||||||
getUrl = pkgList: name:
|
|
||||||
let
|
|
||||||
matches = lib.filter (x: name == x.Package) pkgList;
|
|
||||||
#match = assert lib.length matches == 1; lib.elemAt matches 0;
|
|
||||||
n = lib.length matches;
|
n = lib.length matches;
|
||||||
match =
|
match = builtins.traceVerbose (name + " -- ${builtins.toString n}") (builtins.head matches);
|
||||||
#builtins.trace (name + " -- n=${builtins.toString n}")
|
|
||||||
(lib.elemAt matches 0);
|
apthost = "https://apt.repos.intel.com/oneapi/";
|
||||||
in
|
in
|
||||||
apthost + match.Filename;
|
{
|
||||||
|
url = apthost + match.filename;
|
||||||
|
sha256 = match.sha256;
|
||||||
|
};
|
||||||
|
|
||||||
uncompressDebs = debs: name: stdenv.mkDerivation {
|
uncompressDebs = debs: name: stdenv.mkDerivation {
|
||||||
name = name;
|
name = name;
|
||||||
@ -108,10 +78,7 @@ let
|
|||||||
|
|
||||||
joinDebs = name: names:
|
joinDebs = name: names:
|
||||||
let
|
let
|
||||||
urls = builtins.map (x: getUrl aptPackages x) names;
|
debs = builtins.map (x: builtins.fetchurl (findMatch x)) names;
|
||||||
sums = builtins.map (x: getSum aptPackages x) names;
|
|
||||||
getsrc = url: sha256: builtins.fetchurl { inherit url sha256; };
|
|
||||||
debs = lib.zipListsWith getsrc urls sums;
|
|
||||||
in
|
in
|
||||||
uncompressDebs debs "${name}-source";
|
uncompressDebs debs "${name}-source";
|
||||||
|
|
||||||
@ -501,7 +468,7 @@ let
|
|||||||
'';
|
'';
|
||||||
};
|
};
|
||||||
|
|
||||||
ifort-wrapper = wrapIntel rec {
|
ifort-wrapper = wrapIntel {
|
||||||
cc = intel-compiler-fortran;
|
cc = intel-compiler-fortran;
|
||||||
mygcc = gcc;
|
mygcc = gcc;
|
||||||
extraBuild = ''
|
extraBuild = ''
|
||||||
|
|||||||
File diff suppressed because it is too large
Load Diff
File diff suppressed because it is too large
Load Diff
1
pkgs/intel-oneapi/packages.json
Normal file
1
pkgs/intel-oneapi/packages.json
Normal file
File diff suppressed because one or more lines are too long
205
pkgs/intel-oneapi/packages.nix
Normal file
205
pkgs/intel-oneapi/packages.nix
Normal file
@ -0,0 +1,205 @@
|
|||||||
|
{ lib
|
||||||
|
, stdenv
|
||||||
|
, callPackage
|
||||||
|
, dpkg
|
||||||
|
, fetchurl
|
||||||
|
, recurseIntoAttrs
|
||||||
|
|
||||||
|
, sqlite
|
||||||
|
, elfutils
|
||||||
|
}:
|
||||||
|
|
||||||
|
let
|
||||||
|
inherit (builtins)
|
||||||
|
elem attrNames attrValues concatMap filter fromJSON getAttr groupBy head isNull listToAttrs map mapAttrs readFile replaceStrings splitVersion ;
|
||||||
|
inherit (lib)
|
||||||
|
converge findFirst groupBy' hasPrefix optional pipe take toInt toList versionAtLeast versionOlder ;
|
||||||
|
|
||||||
|
aptData = fromJSON (readFile ./packages.json);
|
||||||
|
|
||||||
|
# Compare versions in debian control file syntax
|
||||||
|
# See: https://www.debian.org/doc/debian-policy/ch-relationships.html#syntax-of-relationship-fields
|
||||||
|
#
|
||||||
|
# NOTE: this is not a proper version comparison
|
||||||
|
#
|
||||||
|
# A proper version solver, should aggregate dependencies with the same name
|
||||||
|
# and compute the constraint (e.g. a (>= 2) a (<< 5) -> 2 <= a << 5)
|
||||||
|
#
|
||||||
|
# But in the intel repo, there are no such "duplicated" dependencies to specify
|
||||||
|
# upper limits, which leads to issues when intel-hpckit-2021 depends on things
|
||||||
|
# like intel-basekit >= 2021.1.0-2403 and we end up installing the newest
|
||||||
|
# basekit instead of the one from 2021.
|
||||||
|
#
|
||||||
|
# To mitigate this, >= is set to take the latest version with matching major
|
||||||
|
# and minor (only revision and patch are allowed to change)
|
||||||
|
compareVersions = got: kind: want:
|
||||||
|
let
|
||||||
|
g0 = take 2 (splitVersion got);
|
||||||
|
w0 = take 2 (splitVersion want);
|
||||||
|
in if isNull want then true
|
||||||
|
else if kind == "=" then got == want
|
||||||
|
else if kind == "<<" then versionOlder got want
|
||||||
|
else if kind == "<=" then versionAtLeast want got
|
||||||
|
else if kind == ">>" then versionOlder want got
|
||||||
|
else if kind == ">=" then (g0 == w0) && versionAtLeast got want # always match major version
|
||||||
|
else throw "unknown operation: ${kind}";
|
||||||
|
|
||||||
|
findMatching = { pname, kind, version }:
|
||||||
|
findFirst (x: pname == x.pname && compareVersions x.version kind version) null aptData;
|
||||||
|
|
||||||
|
isIntel = pkg: (hasPrefix "intel-" pkg.pname);
|
||||||
|
|
||||||
|
expandDeps = pkg: (map findMatching (filter isIntel pkg.dependencies)) ++ (optional (pkg.size != 0) pkg);
|
||||||
|
|
||||||
|
# get the oldest by major version. If they have the same major version, take
|
||||||
|
# the newest. This prevents most issues with resolutions
|
||||||
|
# versionOlder b a -> true if b is older than a (b `older` a)
|
||||||
|
getNewerInMajor = a: b: let
|
||||||
|
va = a.version;
|
||||||
|
vb = b.version;
|
||||||
|
va0 = head (splitVersion va);
|
||||||
|
vb0 = head (splitVersion vb);
|
||||||
|
in
|
||||||
|
if isNull a then b
|
||||||
|
else if va0 != vb0 then
|
||||||
|
if va0 > vb0 then b else a
|
||||||
|
else if versionOlder vb va then a else b;
|
||||||
|
removeDups = l: attrValues (groupBy' getNewerInMajor null (getAttr "provides") l);
|
||||||
|
|
||||||
|
_resolveDeps = converge (l: removeDups (concatMap expandDeps l));
|
||||||
|
resolveDeps = pkg: let deps = _resolveDeps (toList pkg);
|
||||||
|
namedDeps = (map (x: "${x.pname}-${x.version}") deps);
|
||||||
|
in builtins.traceVerbose (builtins.deepSeq namedDeps namedDeps) deps;
|
||||||
|
|
||||||
|
blacklist = [
|
||||||
|
"intel-basekit-env"
|
||||||
|
"intel-basekit-getting-started"
|
||||||
|
"intel-hpckit-env"
|
||||||
|
"intel-hpckit-getting-started"
|
||||||
|
"intel-oneapi-advisor"
|
||||||
|
"intel-oneapi-common-licensing"
|
||||||
|
"intel-oneapi-common-oneapi-vars"
|
||||||
|
"intel-oneapi-common-vars"
|
||||||
|
"intel-oneapi-compiler-cpp-eclipse-cfg"
|
||||||
|
"intel-oneapi-compiler-dpcpp-eclipse-cfg"
|
||||||
|
"intel-oneapi-condaindex"
|
||||||
|
"intel-oneapi-dev-utilities-eclipse-cfg"
|
||||||
|
"intel-oneapi-dpcpp-ct-eclipse-cfg"
|
||||||
|
"intel-oneapi-eclipse-ide"
|
||||||
|
"intel-oneapi-hpc-toolkit-getting-started"
|
||||||
|
"intel-oneapi-icc-eclipse-plugin-cpp"
|
||||||
|
"intel-oneapi-vtune"
|
||||||
|
"intel-oneapi-vtune-eclipse-plugin-vtune"
|
||||||
|
];
|
||||||
|
|
||||||
|
isInBlacklist = pkg: elem pkg.provides blacklist;
|
||||||
|
removeBlacklist = filter (e: !(isInBlacklist e));
|
||||||
|
|
||||||
|
dpkgExtractAll = pname: version: {srcs, deps}: stdenv.mkDerivation {
|
||||||
|
inherit pname version srcs;
|
||||||
|
|
||||||
|
nativeBuildInputs = [ dpkg ];
|
||||||
|
phases = [ "installPhase" ];
|
||||||
|
|
||||||
|
passthru = { inherit deps; };
|
||||||
|
|
||||||
|
installPhase = ''
|
||||||
|
mkdir -p $out
|
||||||
|
for src in $srcs; do
|
||||||
|
echo "Unpacking $src"
|
||||||
|
dpkg -x $src $out
|
||||||
|
done
|
||||||
|
'';
|
||||||
|
};
|
||||||
|
|
||||||
|
apthost = "https://apt.repos.intel.com/oneapi/";
|
||||||
|
fetchDeb = p: fetchurl { url = apthost + p.filename; inherit (p) sha256; };
|
||||||
|
|
||||||
|
buildIntel = pkg: pipe pkg [
|
||||||
|
resolveDeps
|
||||||
|
removeBlacklist
|
||||||
|
(l: {srcs = map fetchDeb l; deps = l; })
|
||||||
|
(dpkgExtractAll "${pkg.provides}-extracted" pkg.version)
|
||||||
|
];
|
||||||
|
|
||||||
|
findHpcKit = year: findMatching { pname = "intel-hpckit"; kind = "<<"; version = toString (year+1); };
|
||||||
|
years = map toInt (attrNames components);
|
||||||
|
|
||||||
|
patchIntel = callPackage ./patch_intel.nix { };
|
||||||
|
|
||||||
|
# Version information for each hpckit. This is used to normalize the paths
|
||||||
|
# so that files are in $out/{bin,lib,include...} instead of all over the place
|
||||||
|
# in $out/opt/intel/oneapi/*/*/{...}.
|
||||||
|
#
|
||||||
|
# The most important is the compiler component, which is used to build the
|
||||||
|
# stdenv for the hpckit.
|
||||||
|
#
|
||||||
|
# NOTE: this have to be manually specified, so we can avoid IFD. To add a
|
||||||
|
# new version, add a new field with an empty attrset, (e.g. "2026" = {}; ),
|
||||||
|
# build hpckit_2026.unpatched and use the values from
|
||||||
|
# result/opt/intel/oneapi/* to populate the attrset.
|
||||||
|
#
|
||||||
|
# WARN: if there are more than one version in the folders of the unpatched
|
||||||
|
# components, our dependency resolution hacks have probably failed and the
|
||||||
|
# package set may be broken.
|
||||||
|
components = {
|
||||||
|
"2025" = {
|
||||||
|
ishmem = "1.4";
|
||||||
|
pti = "0.13";
|
||||||
|
tcm = "1.4";
|
||||||
|
umf = "0.11";
|
||||||
|
|
||||||
|
ccl = "2021.16";
|
||||||
|
compiler = "2025.2";
|
||||||
|
dal = "2025.8";
|
||||||
|
debugger = "2025.2";
|
||||||
|
dev-utilities = "2025.2";
|
||||||
|
dnnl = "2025.2";
|
||||||
|
dpcpp-ct = "2025.2";
|
||||||
|
dpl = "2022.9";
|
||||||
|
ipp = "2022.2";
|
||||||
|
ippcp = "2025.2";
|
||||||
|
mkl = "2025.2";
|
||||||
|
mpi = "2021.16";
|
||||||
|
tbb = "2022.2";
|
||||||
|
};
|
||||||
|
"2024" = {
|
||||||
|
tcm = "1.1";
|
||||||
|
|
||||||
|
ccl = "2021.13";
|
||||||
|
compiler = "2024.2";
|
||||||
|
dal = "2024.6";
|
||||||
|
debugger = "2024.2";
|
||||||
|
dev-utilities = "2024.2";
|
||||||
|
diagnostics = "2024.2";
|
||||||
|
dnnl = "2024.2";
|
||||||
|
dpcpp-ct = "2024.2";
|
||||||
|
dpl = "2022.6";
|
||||||
|
ipp = "2021.12";
|
||||||
|
ippcp = "2021.12";
|
||||||
|
mkl = "2024.2";
|
||||||
|
mpi = "2021.13";
|
||||||
|
tbb = "2021.13";
|
||||||
|
|
||||||
|
extraPackages = [
|
||||||
|
sqlite
|
||||||
|
elfutils
|
||||||
|
];
|
||||||
|
};
|
||||||
|
};
|
||||||
|
|
||||||
|
replaceDots = replaceStrings ["."] ["_"];
|
||||||
|
|
||||||
|
in recurseIntoAttrs (listToAttrs (map (year: let
|
||||||
|
year_str = toString year;
|
||||||
|
in {
|
||||||
|
name = "hpckit_${year_str}";
|
||||||
|
value = patchIntel {unpatched = buildIntel (findHpcKit year); components = components.${year_str}; };
|
||||||
|
}) years)) // {
|
||||||
|
apt = pipe aptData [
|
||||||
|
(groupBy (p: replaceDots p.provides))
|
||||||
|
(mapAttrs (_: l: listToAttrs (map (pkg: { name = replaceDots ("v" + pkg.version); value = pkg; }) l)))
|
||||||
|
] ;
|
||||||
|
|
||||||
|
inherit resolveDeps patchIntel buildIntel;
|
||||||
|
}
|
||||||
179
pkgs/intel-oneapi/patch_intel.nix
Normal file
179
pkgs/intel-oneapi/patch_intel.nix
Normal file
@ -0,0 +1,179 @@
|
|||||||
|
{ stdenvNoCC
|
||||||
|
, lib
|
||||||
|
, symlinkJoin
|
||||||
|
, autoPatchelfHook
|
||||||
|
, wrapCCWith
|
||||||
|
, overrideCC
|
||||||
|
, gcc13
|
||||||
|
, gcc13Stdenv
|
||||||
|
, hwloc
|
||||||
|
, libelf
|
||||||
|
, libffi_3_3
|
||||||
|
, libpsm2
|
||||||
|
, libuuid
|
||||||
|
, libxml2
|
||||||
|
, numactl
|
||||||
|
, ocl-icd
|
||||||
|
, openssl
|
||||||
|
, python3
|
||||||
|
, rdma-core
|
||||||
|
, ucx
|
||||||
|
, zlib
|
||||||
|
, makeOverridable
|
||||||
|
, recurseIntoAttrs
|
||||||
|
}:
|
||||||
|
|
||||||
|
makeOverridable (
|
||||||
|
{
|
||||||
|
unpatched,
|
||||||
|
components ? { },
|
||||||
|
extraPackages ? components.extraPackages or []
|
||||||
|
}:
|
||||||
|
|
||||||
|
let
|
||||||
|
inherit (builtins) attrValues filter mapAttrs removeAttrs;
|
||||||
|
|
||||||
|
gcc = gcc13;
|
||||||
|
stdenv = gcc13Stdenv;
|
||||||
|
|
||||||
|
__components = removeAttrs components ["extraPackages"];
|
||||||
|
_components = __components;
|
||||||
|
# _components = lib.traceSeqN 2 {
|
||||||
|
# inherit unpatched __components;
|
||||||
|
# deps = builtins.map (x: "${x.pname}-${x.version}") unpatched.deps;
|
||||||
|
# } __components;
|
||||||
|
|
||||||
|
wrapIntel = { cc, extraBuildCommands ? "", extraInstall ? "", ... }@args:
|
||||||
|
let
|
||||||
|
targetConfig = stdenv.targetPlatform.config;
|
||||||
|
in (wrapCCWith {
|
||||||
|
inherit cc;
|
||||||
|
extraBuildCommands = ''
|
||||||
|
echo "-L${gcc.cc}/lib/gcc/${targetConfig}/${gcc.version}" >> $out/nix-support/cc-ldflags
|
||||||
|
echo "-L${gcc.cc.lib}/lib" >> $out/nix-support/cc-ldflags
|
||||||
|
echo "-L${cc}/lib" >> $out/nix-support/cc-ldflags
|
||||||
|
|
||||||
|
# echo "--gcc-toolchain=${gcc.cc}" >> $out/nix-support/libcxx-cxxflags
|
||||||
|
echo "--gcc-toolchain=${gcc.cc}" >> $out/nix-support/cc-cflags
|
||||||
|
|
||||||
|
# For some reason, If we don't resolve the realpath things go wrong
|
||||||
|
for stddef in ${cc}/lib/clang/*/include/stddef.h ; do
|
||||||
|
dir=$(dirname $(realpath "$stddef"))
|
||||||
|
echo "-isystem $dir" >> $out/nix-support/cc-cflags
|
||||||
|
done
|
||||||
|
|
||||||
|
echo "-isystem ${cc}/include" >> $out/nix-support/cc-cflags
|
||||||
|
echo "-isystem ${cc}/include/intel64" >> $out/nix-support/cc-cflags
|
||||||
|
|
||||||
|
for dir in ${gcc.cc}/lib/gcc/${targetConfig}/*/include; do
|
||||||
|
echo "-isystem $dir" >> $out/nix-support/cc-cflags
|
||||||
|
done
|
||||||
|
|
||||||
|
for dir in ${gcc.cc}/include/c++/*; do
|
||||||
|
echo "-isystem $dir" >> $out/nix-support/libcxx-cxxflags
|
||||||
|
done
|
||||||
|
for dir in ${gcc.cc}/include/c++/*/${targetConfig}; do
|
||||||
|
echo "-isystem $dir" >> $out/nix-support/libcxx-cxxflags
|
||||||
|
done
|
||||||
|
|
||||||
|
# FIXME: We should find a better way to modify the PATH instead of using
|
||||||
|
# this ugly hack. See https://jungle.bsc.es/git/rarias/bscpkgs/issues/9
|
||||||
|
echo 'path_backup="${gcc.cc}/bin:$path_backup"' >> $out/nix-support/cc-wrapper-hook
|
||||||
|
|
||||||
|
# Disable hardening by default
|
||||||
|
echo "" > $out/nix-support/add-hardening.sh
|
||||||
|
'' + extraBuildCommands;
|
||||||
|
} // (removeAttrs args ["cc" "extraBuildCommands" "extraInstall"])
|
||||||
|
).overrideAttrs (old: {
|
||||||
|
installPhase = old.installPhase + extraInstall;
|
||||||
|
});
|
||||||
|
|
||||||
|
in
|
||||||
|
stdenvNoCC.mkDerivation (finalAttrs: {
|
||||||
|
pname = lib.removeSuffix "-extracted" unpatched.pname;
|
||||||
|
inherit (unpatched) version;
|
||||||
|
src = unpatched;
|
||||||
|
|
||||||
|
phases = [ "installPhase" "fixupPhase" ];
|
||||||
|
buildInputs = [
|
||||||
|
libffi_3_3
|
||||||
|
libelf
|
||||||
|
libxml2
|
||||||
|
hwloc
|
||||||
|
numactl
|
||||||
|
libuuid
|
||||||
|
libpsm2
|
||||||
|
zlib
|
||||||
|
ocl-icd
|
||||||
|
rdma-core
|
||||||
|
ucx
|
||||||
|
openssl
|
||||||
|
python3
|
||||||
|
stdenv.cc.cc.lib
|
||||||
|
] ++ extraPackages;
|
||||||
|
|
||||||
|
autoPatchelfIgnoreMissingDeps = [ "libhwloc.so.5" "libcuda.so.1" "libze_loader.so.1" ];
|
||||||
|
|
||||||
|
# There are broken symlinks that go outside packages, ignore them
|
||||||
|
dontCheckForBrokenSymlinks = true;
|
||||||
|
|
||||||
|
nativeBuildInputs = [ autoPatchelfHook ];
|
||||||
|
installPhase = ''
|
||||||
|
cp -r $src/opt/intel/oneapi/ $out
|
||||||
|
'';
|
||||||
|
|
||||||
|
passthru = let
|
||||||
|
pkgs = mapAttrs
|
||||||
|
(folder: version: symlinkJoin {
|
||||||
|
pname = "intel-${folder}";
|
||||||
|
inherit version;
|
||||||
|
paths = ["${finalAttrs.finalPackage}/${folder}/${version}"];
|
||||||
|
})
|
||||||
|
_components;
|
||||||
|
in pkgs // {
|
||||||
|
inherit unpatched;
|
||||||
|
pkgs = recurseIntoAttrs pkgs;
|
||||||
|
components = _components;
|
||||||
|
|
||||||
|
# This contains all packages properly symlinked into toplevel directories
|
||||||
|
# in $out.
|
||||||
|
#
|
||||||
|
# NOTE: there are clashes with packages that have symlinks outside their
|
||||||
|
# scope (libtcm and env/vars.sh)
|
||||||
|
all = symlinkJoin {
|
||||||
|
pname = finalAttrs.finalPackage + "-symlinked";
|
||||||
|
inherit (finalAttrs.finalPackage) version;
|
||||||
|
paths = filter lib.isDerivation (attrValues finalAttrs.finalPackage.pkgs);
|
||||||
|
};
|
||||||
|
|
||||||
|
stdenv = overrideCC stdenv finalAttrs.finalPackage.cc;
|
||||||
|
|
||||||
|
cc = wrapIntel {
|
||||||
|
cc = finalAttrs.finalPackage.pkgs.compiler;
|
||||||
|
extraBuildCommands = ''
|
||||||
|
wrap icx $wrapper $ccPath/icx
|
||||||
|
wrap icpx $wrapper $ccPath/icpx
|
||||||
|
wrap ifx $wrapper $ccPath/ifx
|
||||||
|
|
||||||
|
ln -s $out/bin/icpx $out/bin/c++
|
||||||
|
ln -s $out/bin/icx $out/bin/cc
|
||||||
|
|
||||||
|
# Use this to detect when a compiler subprocess is called
|
||||||
|
# from icpx (--fsycl-host-compiler)
|
||||||
|
echo 'export "NIX_CC_WRAPPER_INTEL=1"' >> $out/nix-support/cc-wrapper-hook
|
||||||
|
|
||||||
|
sed -i 's/.*isCxx=0/isCxx=1/' $out/bin/icpx
|
||||||
|
|
||||||
|
# oneMath looks for sycl libraries in bin/../lib
|
||||||
|
ln -s ${finalAttrs.finalPackage.pkgs.compiler}/lib $out/lib
|
||||||
|
ln -s ${finalAttrs.finalPackage.pkgs.compiler}/include $out/include
|
||||||
|
'';
|
||||||
|
extraInstall = ''
|
||||||
|
export named_cc="icx"
|
||||||
|
export named_cxx="icpx"
|
||||||
|
export named_fc="ifx"
|
||||||
|
'';
|
||||||
|
};
|
||||||
|
};
|
||||||
|
|
||||||
|
}))
|
||||||
29
pkgs/intel-oneapi/process.jq
Executable file
29
pkgs/intel-oneapi/process.jq
Executable file
@ -0,0 +1,29 @@
|
|||||||
|
#!/usr/bin/env -S jq -f
|
||||||
|
|
||||||
|
def extract_fields: {
|
||||||
|
pname : .Package,
|
||||||
|
version : .Version,
|
||||||
|
provides : .Package | sub("[0-9.-]*$"; ""),
|
||||||
|
filename : .Filename,
|
||||||
|
size : ."Installed-Size" | tonumber,
|
||||||
|
sha256 : .SHA256,
|
||||||
|
dependencies : .Depends,
|
||||||
|
} ;
|
||||||
|
|
||||||
|
# parses dependencies into a list of [{.pname, .kind, .version}]
|
||||||
|
# some dependencies do not have a version specified, in which case, kind = version = null
|
||||||
|
#
|
||||||
|
# example dependencies:
|
||||||
|
# intel-oneapi-common-vars (>= 2023.0.0-25325), intel-oneapi-common-licensing-2023.0.0
|
||||||
|
|
||||||
|
def split_dependencies : map(try(.dependencies |= split(",\\s?"; "")) // .dependencies |= []) ;
|
||||||
|
|
||||||
|
def match_version : capture("(?<pname>[a-zA-Z0-9_\\-.]*) *(\\((?<kind>[<>=]*) *(?<version>.*)\\))?"; "") ;
|
||||||
|
|
||||||
|
def parse_dependencies : map_values(.dependencies.[] |= match_version) ;
|
||||||
|
|
||||||
|
def sort_version_decreasing : sort_by(.version | split("[-.]"; "") | map(tonumber)) | reverse ;
|
||||||
|
|
||||||
|
map(extract_fields) | split_dependencies | parse_dependencies | sort_version_decreasing
|
||||||
|
|
||||||
|
# [.[] | select(.pname == "intel-hpckit") | .version]
|
||||||
29
pkgs/intel-oneapi/toJson.awk
Executable file
29
pkgs/intel-oneapi/toJson.awk
Executable file
@ -0,0 +1,29 @@
|
|||||||
|
#!/usr/bin/env -S awk -f
|
||||||
|
|
||||||
|
BEGIN {
|
||||||
|
FS=": "
|
||||||
|
|
||||||
|
prev_empty=1
|
||||||
|
t=" "
|
||||||
|
|
||||||
|
print "[ {"
|
||||||
|
}
|
||||||
|
|
||||||
|
!NF { # empty line, update separator so next non empty line closes the dict
|
||||||
|
prev_empty=1
|
||||||
|
t="},\n{ "
|
||||||
|
next # skip line (we won't match anything else)
|
||||||
|
}
|
||||||
|
|
||||||
|
{
|
||||||
|
printf t "\"%s\" : \"%s\"\n", $1, $2
|
||||||
|
|
||||||
|
if (prev_empty) {
|
||||||
|
# we were the first after a group of empty lines, following ones have to
|
||||||
|
# have a comma
|
||||||
|
prev_empty=0
|
||||||
|
t=", "
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
END { print "} ]" }
|
||||||
@ -1,4 +1,11 @@
|
|||||||
#!/bin/sh
|
#!/bin/sh
|
||||||
|
|
||||||
curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-amd64/Packages -o amd64-packages
|
out_64=$(mktemp intel-api.64.XXXXXX)
|
||||||
curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-all/Packages -o all-packages
|
out_all=$(mktemp intel-api.all.XXXXXX)
|
||||||
|
trap 'rm -f "$out_64" "$out_all"' EXIT INT HUP
|
||||||
|
|
||||||
|
curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-amd64/Packages -o "$out_64"
|
||||||
|
curl https://apt.repos.intel.com/oneapi/dists/all/main/binary-all/Packages -o "$out_all"
|
||||||
|
|
||||||
|
# NOTE: we use `jq -r tostring` to minify the json (3.2Mb -> 2.3Mb)
|
||||||
|
cat "$out_64" "$out_all" | ./toJson.awk | ./process.jq | jq -r tostring >packages.json
|
||||||
|
|||||||
@ -2,7 +2,9 @@
|
|||||||
stdenv
|
stdenv
|
||||||
, lib
|
, lib
|
||||||
, gcc
|
, gcc
|
||||||
|
, gcc13
|
||||||
, clangOmpss2Unwrapped
|
, clangOmpss2Unwrapped
|
||||||
|
, writeShellScript
|
||||||
, openmp ? null
|
, openmp ? null
|
||||||
, wrapCCWith
|
, wrapCCWith
|
||||||
, llvmPackages_latest
|
, llvmPackages_latest
|
||||||
@ -37,10 +39,7 @@ let
|
|||||||
inherit gcc;
|
inherit gcc;
|
||||||
cc = clangOmpss2Unwrapped;
|
cc = clangOmpss2Unwrapped;
|
||||||
gccVersion = with versions; let v = gcc.version; in concatStringsSep "." [(major v) (minor v) (patch v)];
|
gccVersion = with versions; let v = gcc.version; in concatStringsSep "." [(major v) (minor v) (patch v)];
|
||||||
in wrapCCWith {
|
|
||||||
inherit cc bintools;
|
|
||||||
# extraPackages adds packages to depsTargetTargetPropagated
|
|
||||||
extraPackages = optional (openmp != null) openmp;
|
|
||||||
extraBuildCommands = ''
|
extraBuildCommands = ''
|
||||||
echo "-target ${targetConfig}" >> $out/nix-support/cc-cflags
|
echo "-target ${targetConfig}" >> $out/nix-support/cc-cflags
|
||||||
echo "-B${gcc.cc}/lib/gcc/${targetConfig}/${gccVersion}" >> $out/nix-support/cc-cflags
|
echo "-B${gcc.cc}/lib/gcc/${targetConfig}/${gccVersion}" >> $out/nix-support/cc-cflags
|
||||||
@ -57,14 +56,52 @@ in wrapCCWith {
|
|||||||
echo "--gcc-toolchain=${gcc}" >> $out/nix-support/cc-cflags
|
echo "--gcc-toolchain=${gcc}" >> $out/nix-support/cc-cflags
|
||||||
|
|
||||||
wrap clang++ $wrapper $ccPath/clang++
|
wrap clang++ $wrapper $ccPath/clang++
|
||||||
|
|
||||||
'' + optionalString (openmp != null) ''
|
|
||||||
echo "export OPENMP_RUNTIME=${ompname}" >> $out/nix-support/cc-wrapper-hook
|
|
||||||
'' + optionalString (ompss2rt != null) ''
|
|
||||||
echo "export OMPSS2_RUNTIME=${rtname}" >> $out/nix-support/cc-wrapper-hook
|
|
||||||
echo "export ${homevar}=${ompss2rt}" >> $out/nix-support/cc-wrapper-hook
|
|
||||||
'' + optionalString (ompss2rt != null && ompss2rt.pname == "nodes") ''
|
|
||||||
echo "export NOSV_HOME=${ompss2rt.nosv}" >> $out/nix-support/cc-wrapper-hook
|
|
||||||
'';
|
'';
|
||||||
}
|
|
||||||
|
|
||||||
|
envExports = lib.optionalString (openmp != null) ''
|
||||||
|
echo "export OPENMP_RUNTIME=${ompname}" >> $out/nix-support/cc-wrapper-hook
|
||||||
|
'' + optionalString (ompss2rt != null) ''
|
||||||
|
echo "export OMPSS2_RUNTIME=${rtname}" >> $out/nix-support/cc-wrapper-hook
|
||||||
|
echo "export ${homevar}=${ompss2rt}" >> $out/nix-support/cc-wrapper-hook
|
||||||
|
'' + optionalString (ompss2rt != null && ompss2rt.pname == "nodes") ''
|
||||||
|
echo "export NOSV_HOME=${ompss2rt.nosv}" >> $out/nix-support/cc-wrapper-hook
|
||||||
|
'';
|
||||||
|
|
||||||
|
extraPackages = optional (openmp != null) openmp;
|
||||||
|
|
||||||
|
wrappedCC = wrapCCWith {
|
||||||
|
# extraPackages adds packages to depsTargetTargetPropagated
|
||||||
|
inherit cc bintools extraPackages;
|
||||||
|
extraBuildCommands = extraBuildCommands + envExports;
|
||||||
|
};
|
||||||
|
|
||||||
|
resetIntelCCFlags = let tconf = builtins.replaceStrings ["-"] ["_"] targetConfig;
|
||||||
|
in writeShellScript "remove-intel.sh" ''
|
||||||
|
if [ "''${NIX_CC_WRAPPER_INTEL:-0}" = 1 ]; then
|
||||||
|
unset NIX_CFLAGS_COMPILE_${tconf}
|
||||||
|
unset NIX_CC_WRAPPER_FLAGS_SET_${tconf}
|
||||||
|
|
||||||
|
if (( "''${NIX_DEBUG:-0}" >= 1 )); then
|
||||||
|
echo "ompss2: cleaned NIX_CFLAGS_COMPILE_${tconf} (invokation from intel compiler detected)"
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
'';
|
||||||
|
|
||||||
|
intelExtraBuildCommands = ''
|
||||||
|
sed -i 's|# Flirting.*|source ${resetIntelCCFlags}\n\n&|' $out/bin/clang
|
||||||
|
sed -i 's|# Flirting.*|source ${resetIntelCCFlags}\n\n&|' $out/bin/clang++
|
||||||
|
'';
|
||||||
|
|
||||||
|
wrappedCCIntel = wrapCCWith {
|
||||||
|
inherit bintools extraPackages;
|
||||||
|
cc = cc.override { gcc = gcc13; }; # Intel uses gcc13, so we have to match it
|
||||||
|
gccForLibs = gcc13;
|
||||||
|
# extraPackages adds packages to depsTargetTargetPropagated
|
||||||
|
extraBuildCommands = intelExtraBuildCommands + envExports;
|
||||||
|
};
|
||||||
|
|
||||||
|
in wrappedCC.overrideAttrs (oldAttrs: {
|
||||||
|
passthru = oldAttrs.passthru // {
|
||||||
|
forIcpx = wrappedCCIntel;
|
||||||
|
};
|
||||||
|
})
|
||||||
|
|||||||
84
pkgs/onemath/default.nix
Normal file
84
pkgs/onemath/default.nix
Normal file
@ -0,0 +1,84 @@
|
|||||||
|
{ lib
|
||||||
|
, fetchFromGitHub
|
||||||
|
, cmake
|
||||||
|
, withCFlags
|
||||||
|
, intelPackages
|
||||||
|
|
||||||
|
, mklSupport ? true
|
||||||
|
|
||||||
|
, config
|
||||||
|
|
||||||
|
, cudaSupport ? config.cudaSupport
|
||||||
|
, cudaPackages ? { }
|
||||||
|
|
||||||
|
, rocmSupport ? config.rocmSupport
|
||||||
|
, hipTargets ? null # only one target at a time supported
|
||||||
|
, rocmPackages ? { }
|
||||||
|
}:
|
||||||
|
|
||||||
|
let
|
||||||
|
# rocmSupport is not enough, we need a specific target
|
||||||
|
enableHip = rocmSupport && hipTargets != null;
|
||||||
|
|
||||||
|
stdenv = withCFlags (lib.optionals cudaSupport [ "--cuda-path=${cudaPackages.cudatoolkit}" ]) intelPackages.stdenv;
|
||||||
|
in
|
||||||
|
|
||||||
|
# at least one backend has to be enabled
|
||||||
|
assert mklSupport || cudaSupport || enableHip;
|
||||||
|
|
||||||
|
stdenv.mkDerivation rec {
|
||||||
|
pname = "oneMath";
|
||||||
|
version = "0.8";
|
||||||
|
|
||||||
|
src = fetchFromGitHub {
|
||||||
|
owner = "uxlfoundation";
|
||||||
|
repo = "oneMath";
|
||||||
|
rev = "v${version}";
|
||||||
|
sha256 = "sha256-xK8lKI3oqKlx3xtvdScpMq+HXAuoYCP0BZdkEqnJP5o=";
|
||||||
|
};
|
||||||
|
|
||||||
|
cmakeFlags = [
|
||||||
|
(lib.cmakeBool "ENABLE_MKLCPU_BACKEND" mklSupport)
|
||||||
|
(lib.cmakeBool "ENABLE_MKLGPU_BACKEND" mklSupport)
|
||||||
|
|
||||||
|
(lib.cmakeBool "ENABLE_CUBLAS_BACKEND" cudaSupport)
|
||||||
|
(lib.cmakeBool "ENABLE_CUFFT_BACKEND" cudaSupport)
|
||||||
|
(lib.cmakeBool "ENABLE_CURAND_BACKEND" cudaSupport)
|
||||||
|
(lib.cmakeBool "ENABLE_CUSOLVER_BACKEND" cudaSupport)
|
||||||
|
(lib.cmakeBool "ENABLE_CUSPARSE_BACKEND" cudaSupport)
|
||||||
|
|
||||||
|
(lib.cmakeBool "ENABLE_ROCBLAS_BACKEND" enableHip)
|
||||||
|
(lib.cmakeBool "ENABLE_ROCFFT_BACKEND" enableHip)
|
||||||
|
(lib.cmakeBool "ENABLE_ROCSOLVER_BACKEND" enableHip)
|
||||||
|
(lib.cmakeBool "ENABLE_ROCRAND_BACKEND" enableHip)
|
||||||
|
(lib.cmakeBool "ENABLE_ROCSPARSE_BACKEND" enableHip)
|
||||||
|
|
||||||
|
(lib.cmakeBool "BUILD_FUNCTIONAL_TESTS" false)
|
||||||
|
(lib.cmakeBool "BUILD_EXAMPLES" false)
|
||||||
|
] ++ lib.optionals enableHip [
|
||||||
|
(lib.cmakeFeature "HIP_TARGETS" hipTargets)
|
||||||
|
];
|
||||||
|
|
||||||
|
nativeBuildInputs = [ cmake ];
|
||||||
|
buildInputs = lib.optionals (mklSupport) [
|
||||||
|
intelPackages.mkl
|
||||||
|
intelPackages.tbb
|
||||||
|
] ++ lib.optionals (enableHip) [
|
||||||
|
rocmPackages.rocmPath
|
||||||
|
rocmPackages.rocblas
|
||||||
|
rocmPackages.rocfft
|
||||||
|
rocmPackages.rocsolver
|
||||||
|
rocmPackages.rocrand
|
||||||
|
rocmPackages.rocsparse
|
||||||
|
] ++ lib.optionals (cudaSupport) [
|
||||||
|
(lib.getDev cudaPackages.cuda_cudart)
|
||||||
|
cudaPackages.cudatoolkit
|
||||||
|
|
||||||
|
cudaPackages.libcublas
|
||||||
|
cudaPackages.libcurand
|
||||||
|
cudaPackages.libcufft
|
||||||
|
cudaPackages.libcusparse
|
||||||
|
cudaPackages.libcusolver
|
||||||
|
];
|
||||||
|
|
||||||
|
}
|
||||||
@ -1,5 +1,4 @@
|
|||||||
{
|
{ stdenv
|
||||||
stdenv
|
|
||||||
, lib
|
, lib
|
||||||
, fetchFromGitHub
|
, fetchFromGitHub
|
||||||
, autoreconfHook
|
, autoreconfHook
|
||||||
@ -13,14 +12,17 @@
|
|||||||
, openssl
|
, openssl
|
||||||
, glibcLocales
|
, glibcLocales
|
||||||
, wrapGAppsHook
|
, wrapGAppsHook
|
||||||
|
|
||||||
|
, enableDebug ? false
|
||||||
}:
|
}:
|
||||||
|
|
||||||
let
|
let
|
||||||
wx = wxGTK32;
|
wx = wxGTK32;
|
||||||
in
|
|
||||||
stdenv.mkDerivation rec {
|
|
||||||
pname = "wxparaver";
|
|
||||||
version = "4.12.0";
|
version = "4.12.0";
|
||||||
|
in
|
||||||
|
stdenv.mkDerivation {
|
||||||
|
pname = "wxparaver";
|
||||||
|
inherit version;
|
||||||
|
|
||||||
src = fetchFromGitHub {
|
src = fetchFromGitHub {
|
||||||
owner = "bsc-performance-tools";
|
owner = "bsc-performance-tools";
|
||||||
@ -37,21 +39,26 @@ stdenv.mkDerivation rec {
|
|||||||
./fix-boost-87.patch
|
./fix-boost-87.patch
|
||||||
];
|
];
|
||||||
|
|
||||||
hardeningDisable = [ "all" ];
|
|
||||||
|
|
||||||
# Fix the PARAVER_HOME variable
|
# Fix the PARAVER_HOME variable
|
||||||
postPatch = ''
|
postPatch = ''
|
||||||
sed -i 's@^PARAVER_HOME=.*$@PARAVER_HOME='$out'@g' docs/wxparaver
|
sed -i 's@^PARAVER_HOME=.*$@PARAVER_HOME='$out'@g' docs/wxparaver
|
||||||
sed -i '1aexport LOCALE_ARCHIVE="${glibcLocales}/lib/locale/locale-archive"' docs/wxparaver
|
sed -i '1aexport LOCALE_ARCHIVE="${glibcLocales}/lib/locale/locale-archive"' docs/wxparaver
|
||||||
'';
|
'';
|
||||||
|
|
||||||
dontStrip = true;
|
|
||||||
enableParallelBuilding = true;
|
enableParallelBuilding = true;
|
||||||
|
|
||||||
preConfigure = ''
|
hardeningDisable = [ "all" ];
|
||||||
export CFLAGS="-O3"
|
|
||||||
export CXXFLAGS="-O3"
|
dontStrip = true;
|
||||||
'';
|
|
||||||
|
env =
|
||||||
|
let
|
||||||
|
flags = if enableDebug then "-ggdb -Og" else "-O3";
|
||||||
|
in
|
||||||
|
{
|
||||||
|
CFLAGS = flags;
|
||||||
|
CXXFLAGS = flags;
|
||||||
|
};
|
||||||
|
|
||||||
configureFlags = [
|
configureFlags = [
|
||||||
"--with-boost=${boost}"
|
"--with-boost=${boost}"
|
||||||
@ -69,11 +76,11 @@ stdenv.mkDerivation rec {
|
|||||||
|
|
||||||
buildInputs = [
|
buildInputs = [
|
||||||
boost
|
boost
|
||||||
libxml2.dev
|
libxml2
|
||||||
xml2
|
xml2
|
||||||
wx
|
wx
|
||||||
paraverKernel
|
paraverKernel
|
||||||
openssl.dev
|
openssl
|
||||||
];
|
];
|
||||||
|
|
||||||
postInstall = ''
|
postInstall = ''
|
||||||
|
|||||||
@ -1,5 +1,4 @@
|
|||||||
{
|
{ stdenv
|
||||||
stdenv
|
|
||||||
, lib
|
, lib
|
||||||
, fetchFromGitHub
|
, fetchFromGitHub
|
||||||
, autoreconfHook
|
, autoreconfHook
|
||||||
@ -10,11 +9,16 @@
|
|||||||
, automake
|
, automake
|
||||||
, pkg-config
|
, pkg-config
|
||||||
, zlib
|
, zlib
|
||||||
|
|
||||||
|
, enableDebug ? false
|
||||||
}:
|
}:
|
||||||
|
|
||||||
stdenv.mkDerivation rec {
|
let
|
||||||
pname = "paraver-kernel";
|
|
||||||
version = "4.12.0";
|
version = "4.12.0";
|
||||||
|
in
|
||||||
|
stdenv.mkDerivation {
|
||||||
|
pname = "paraver-kernel";
|
||||||
|
inherit version;
|
||||||
|
|
||||||
src = fetchFromGitHub {
|
src = fetchFromGitHub {
|
||||||
owner = "bsc-performance-tools";
|
owner = "bsc-performance-tools";
|
||||||
@ -35,10 +39,14 @@ stdenv.mkDerivation rec {
|
|||||||
|
|
||||||
dontStrip = true;
|
dontStrip = true;
|
||||||
|
|
||||||
preConfigure = ''
|
env =
|
||||||
export CFLAGS="-O3 -DPARALLEL_ENABLED"
|
let
|
||||||
export CXXFLAGS="-O3 -DPARALLEL_ENABLED"
|
flags = "-DPARALLEL_ENABLED " + (if enableDebug then "-ggdb -Og" else "-O3");
|
||||||
'';
|
in
|
||||||
|
{
|
||||||
|
CFLAGS = flags;
|
||||||
|
CXXFLAGS = flags;
|
||||||
|
};
|
||||||
|
|
||||||
configureFlags = [
|
configureFlags = [
|
||||||
"--with-boost=${boost}"
|
"--with-boost=${boost}"
|
||||||
|
|||||||
26
pkgs/pocl/0001-cmake-do-not-use-suffix.patch
Normal file
26
pkgs/pocl/0001-cmake-do-not-use-suffix.patch
Normal file
@ -0,0 +1,26 @@
|
|||||||
|
From ccf301659caac9b5e973ba1f2d32352acf617a98 Mon Sep 17 00:00:00 2001
|
||||||
|
From: =?UTF-8?q?Aleix=20Bon=C3=A9?= <aleix.boneribo@bsc.es>
|
||||||
|
Date: Tue, 2 Jul 2024 16:45:05 +0200
|
||||||
|
Subject: [PATCH] cmake: do not use suffix
|
||||||
|
|
||||||
|
---
|
||||||
|
cmake/LLVM.cmake | 3 ++
|
||||||
|
1 files changed, 3 insertions(+)
|
||||||
|
|
||||||
|
diff --git a/cmake/LLVM.cmake b/cmake/LLVM.cmake
|
||||||
|
index f4dbda065..e29144dce 100644
|
||||||
|
--- a/cmake/LLVM.cmake
|
||||||
|
+++ b/cmake/LLVM.cmake
|
||||||
|
@@ -65,6 +65,9 @@ else()
|
||||||
|
message(WARNING "Cannot determine llvm binary suffix from ${LLVM_CONFIG}")
|
||||||
|
endif()
|
||||||
|
message(STATUS "LLVM binaries suffix : ${LLVM_BINARY_SUFFIX}")
|
||||||
|
+
|
||||||
|
+ # We don't want suffixes in nix
|
||||||
|
+ set(LLVM_BINARY_SUFFIX "")
|
||||||
|
endif()
|
||||||
|
|
||||||
|
get_filename_component(LLVM_CONFIG_LOCATION "${LLVM_CONFIG}" DIRECTORY)
|
||||||
|
--
|
||||||
|
2.45.1
|
||||||
|
|
||||||
33
pkgs/pocl/0001-cmake-native-build-tools.patch
Normal file
33
pkgs/pocl/0001-cmake-native-build-tools.patch
Normal file
@ -0,0 +1,33 @@
|
|||||||
|
From f24b456c50f587b05cc8f2699c94d8cdefc5b13e Mon Sep 17 00:00:00 2001
|
||||||
|
From: =?UTF-8?q?Aleix=20Bon=C3=A9?= <aleix.boneribo@bsc.es>
|
||||||
|
Date: Tue, 2 Jul 2024 17:11:11 +0200
|
||||||
|
Subject: [PATCH] cmake: native build tools
|
||||||
|
|
||||||
|
---
|
||||||
|
cmake/LLVM.cmake | 7 +-
|
||||||
|
1 files changed, 6 insertions(+), 1 deletion(-)
|
||||||
|
|
||||||
|
diff --git a/cmake/LLVM.cmake b/cmake/LLVM.cmake
|
||||||
|
index e29144dce..b9f14ce6a 100644
|
||||||
|
--- a/cmake/LLVM.cmake
|
||||||
|
+++ b/cmake/LLVM.cmake
|
||||||
|
@@ -269,10 +269,15 @@ endforeach()
|
||||||
|
|
||||||
|
####################################################################
|
||||||
|
|
||||||
|
+if(DEFINED LLVM_NATIVE_TOOL_DIR)
|
||||||
|
+ set(TOOL_DIR "${LLVM_NATIVE_TOOL_DIR}")
|
||||||
|
+ message(STATUS "TOOL_DIR=${TOOL_DIR}")
|
||||||
|
+endif()
|
||||||
|
+
|
||||||
|
macro(find_program_or_die OUTPUT_VAR PROG_NAME DOCSTRING)
|
||||||
|
find_program(${OUTPUT_VAR}
|
||||||
|
NAMES "${PROG_NAME}${LLVM_BINARY_SUFFIX}${CMAKE_EXECUTABLE_SUFFIX}"
|
||||||
|
- HINTS "${LLVM_BINDIR}" "${LLVM_CONFIG_LOCATION}"
|
||||||
|
+ HINTS "${TOOL_DIR}" "${LLVM_BINDIR}" "${LLVM_CONFIG_LOCATION}"
|
||||||
|
DOC "${DOCSTRING}"
|
||||||
|
NO_CMAKE_PATH
|
||||||
|
NO_CMAKE_ENVIRONMENT_PATH
|
||||||
|
--
|
||||||
|
2.45.1
|
||||||
|
|
||||||
48
pkgs/pocl/0001-cmake-use-clang-from-cmake-variable.patch
Normal file
48
pkgs/pocl/0001-cmake-use-clang-from-cmake-variable.patch
Normal file
@ -0,0 +1,48 @@
|
|||||||
|
From 4688b5ce895761c884ae15fc0234ed8d623b988b Mon Sep 17 00:00:00 2001
|
||||||
|
From: =?UTF-8?q?Aleix=20Bon=C3=A9?= <aleix.boneribo@bsc.es>
|
||||||
|
Date: Tue, 2 Jul 2024 15:41:47 +0200
|
||||||
|
Subject: [PATCH] cmake: use clang from cmake variable
|
||||||
|
|
||||||
|
---
|
||||||
|
cmake/LLVM.cmake | 22 ++++++++++++++++++++--
|
||||||
|
1 file changed, 20 insertions(+), 2 deletions(-)
|
||||||
|
|
||||||
|
diff --git a/cmake/LLVM.cmake b/cmake/LLVM.cmake
|
||||||
|
index 71b786dc7..f4dbda065 100644
|
||||||
|
--- a/cmake/LLVM.cmake
|
||||||
|
+++ b/cmake/LLVM.cmake
|
||||||
|
@@ -281,11 +281,29 @@ macro(find_program_or_die OUTPUT_VAR PROG_NAME DOCSTRING)
|
||||||
|
endif()
|
||||||
|
endmacro()
|
||||||
|
|
||||||
|
-find_program_or_die( CLANG "clang" "clang binary")
|
||||||
|
+# -DCMAKE_C_COMPILER=riscv64-unknown-linux-gnu-clang -DCMAKE_CXX_COMPILER=riscv64-unknown-linux-gnu-clang++
|
||||||
|
+
|
||||||
|
+# if(DEFINED CLANG_EXECUTABLE)
|
||||||
|
+if(DEFINED CMAKE_C_COMPILER)
|
||||||
|
+ # set(CLANG "${CLANG_EXECUTABLE}")
|
||||||
|
+ set(CLANG "${CMAKE_C_COMPILER}")
|
||||||
|
+ message(STATUS "Using CLANG_EXECUTABLE: ${CLANG}")
|
||||||
|
+else()
|
||||||
|
+ find_program_or_die( CLANG "clang" "clang binary")
|
||||||
|
+endif()
|
||||||
|
execute_process(COMMAND "${CLANG}" "--version" OUTPUT_VARIABLE LLVM_CLANG_VERSION RESULT_VARIABLE CLANG_RES)
|
||||||
|
+
|
||||||
|
# TODO this should be optional
|
||||||
|
-find_program_or_die( CLANGXX "clang++" "clang++ binary")
|
||||||
|
+# if(DEFINED CLANGXX_EXECUTABLE)
|
||||||
|
+if(DEFINED CMAKE_CXX_COMPILER)
|
||||||
|
+ # set(CLANGXX "${CLANGXX_EXECUTABLE}")
|
||||||
|
+ set(CLANGXX "${CMAKE_CXX_COMPILER}")
|
||||||
|
+ message(STATUS "Using CLANGXX_EXECUTABLE: ${CLANGXX}")
|
||||||
|
+else()
|
||||||
|
+ find_program_or_die( CLANGXX "clang++" "clang++ binary")
|
||||||
|
+endif()
|
||||||
|
execute_process(COMMAND "${CLANGXX}" "--version" OUTPUT_VARIABLE LLVM_CLANGXX_VERSION RESULT_VARIABLE CLANGXX_RES)
|
||||||
|
+
|
||||||
|
if(CLANGXX_RES OR CLANG_RES)
|
||||||
|
message(FATAL_ERROR "Failed running clang/clang++ --version")
|
||||||
|
endif()
|
||||||
|
--
|
||||||
|
2.45.1
|
||||||
|
|
||||||
226
pkgs/pocl/default.nix
Normal file
226
pkgs/pocl/default.nix
Normal file
@ -0,0 +1,226 @@
|
|||||||
|
{ lib
|
||||||
|
, llvmPackages
|
||||||
|
, ninja
|
||||||
|
, cmake
|
||||||
|
, hwloc
|
||||||
|
, ocl-icd
|
||||||
|
, opencl-headers
|
||||||
|
, getconf
|
||||||
|
, pkg-config
|
||||||
|
, spirv-llvm-translator
|
||||||
|
, spirv-tools
|
||||||
|
, libxml2 # required for statically linked llvm
|
||||||
|
, python3
|
||||||
|
, writableTmpDirAsHomeHook
|
||||||
|
|
||||||
|
, fetchFromGitHub
|
||||||
|
|
||||||
|
, useGit ? false
|
||||||
|
, gitUrl ? "git@gitlab-internal.bsc.es:task-awareness/pocl/pocl.git"
|
||||||
|
, gitBranch ? "new-device"
|
||||||
|
, gitCommit ? "dd10c2221b31223cbb796182df6a07f11c7541f5"
|
||||||
|
|
||||||
|
, staticLLVM ? true
|
||||||
|
, enableICD ? true
|
||||||
|
, enableSPIRV ? true
|
||||||
|
, enableHWLOC ? true
|
||||||
|
, enableRemoteServer ? false
|
||||||
|
, enableRemoteClient ? false
|
||||||
|
, enableDistroVariants ? false
|
||||||
|
|
||||||
|
, lttng-ust
|
||||||
|
, enableLTTNG ? false
|
||||||
|
|
||||||
|
, tbb
|
||||||
|
, enableTBB ? false
|
||||||
|
|
||||||
|
, nosv ? null
|
||||||
|
, ovni ? null
|
||||||
|
, enableNOSV ? useGit
|
||||||
|
, enableOVNI ? useGit
|
||||||
|
|
||||||
|
, buildPackages
|
||||||
|
, nix-update-script
|
||||||
|
}:
|
||||||
|
|
||||||
|
let
|
||||||
|
|
||||||
|
release = rec {
|
||||||
|
version = "7.1";
|
||||||
|
src = fetchFromGitHub {
|
||||||
|
owner = "pocl";
|
||||||
|
repo = "pocl";
|
||||||
|
tag = "v${version}";
|
||||||
|
hash = "sha256-bS6vTIjLO7YLs7qYLKW0cYYbEJ/hRS/+IjjAKbkj8ac=";
|
||||||
|
};
|
||||||
|
};
|
||||||
|
|
||||||
|
git = rec {
|
||||||
|
version = src.shortRev;
|
||||||
|
src = builtins.fetchGit {
|
||||||
|
url = gitUrl;
|
||||||
|
ref = gitBranch;
|
||||||
|
rev = gitCommit;
|
||||||
|
};
|
||||||
|
};
|
||||||
|
|
||||||
|
source = if (useGit) then git else release;
|
||||||
|
|
||||||
|
stdenv = llvmPackages.stdenv;
|
||||||
|
|
||||||
|
buildLlvmPackages = buildPackages.llvmPackages;
|
||||||
|
|
||||||
|
isCross = stdenv.hostPlatform != stdenv.buildPlatform;
|
||||||
|
|
||||||
|
featureList = lib.concatStringsSep "+" (
|
||||||
|
(lib.optionals enableICD ["icd"]) ++
|
||||||
|
(lib.optionals enableNOSV ["nosv"]) ++
|
||||||
|
(lib.optionals enableOVNI ["ovni"]) ++
|
||||||
|
(lib.optionals enableSPIRV ["spirv"]) ++
|
||||||
|
(lib.optionals enableTBB ["tbb"]) ++
|
||||||
|
(lib.optionals enableRemoteClient ["server"]) ++
|
||||||
|
(lib.optionals enableRemoteServer ["client"])
|
||||||
|
);
|
||||||
|
in
|
||||||
|
|
||||||
|
stdenv.mkDerivation (finalAttrs: {
|
||||||
|
pname = "pocl";
|
||||||
|
version = featureList + "-" + source.version;
|
||||||
|
inherit (source) src;
|
||||||
|
|
||||||
|
patches = lib.optionals useGit [
|
||||||
|
./0001-cmake-use-clang-from-cmake-variable.patch
|
||||||
|
./0001-cmake-do-not-use-suffix.patch
|
||||||
|
./0001-cmake-native-build-tools.patch
|
||||||
|
];
|
||||||
|
|
||||||
|
cmakeFlags = [
|
||||||
|
(lib.cmakeOptionType "filepath" "WITH_LLVM_CONFIG" (lib.getExe' buildLlvmPackages.llvm.dev "llvm-config"))
|
||||||
|
(lib.cmakeOptionType "filepath" "CLANG" (lib.getExe' buildLlvmPackages.clangUseLLVM "clang"))
|
||||||
|
(lib.cmakeOptionType "filepath" "CLANGXX" (lib.getExe' buildLlvmPackages.clangUseLLVM "clang++"))
|
||||||
|
(lib.cmakeOptionType "path" "CLANG_RESOURCE_DIR" "${llvmPackages.stdenv.cc}/resource-root")
|
||||||
|
|
||||||
|
(lib.cmakeBool "ENABLE_TESTS" finalAttrs.finalPackage.doCheck)
|
||||||
|
|
||||||
|
(lib.cmakeBool "ENABLE_RELOCATION" true)
|
||||||
|
(lib.cmakeBool "ENABLE_POCL_BUILDING" true)
|
||||||
|
(lib.cmakeBool "POCL_ICD_ABSOLUTE_PATH" true)
|
||||||
|
|
||||||
|
(lib.cmakeBool "ENABLE_TBB_DEVICE" enableTBB)
|
||||||
|
(lib.cmakeBool "ENABLE_ICD" enableICD)
|
||||||
|
(lib.cmakeBool "ENABLE_HWLOC" enableHWLOC)
|
||||||
|
(lib.cmakeBool "ENABLE_LTTNG" enableLTTNG)
|
||||||
|
|
||||||
|
(lib.cmakeBool "ENABLE_REMOTE_CLIENT" enableRemoteClient)
|
||||||
|
(lib.cmakeBool "ENABLE_REMOTE_SERVER" enableRemoteServer)
|
||||||
|
|
||||||
|
# avoid the runtime linker pulling in a different llvm e.g. from graphics drivers
|
||||||
|
(lib.cmakeBool "STATIC_LLVM" staticLLVM)
|
||||||
|
] ++ lib.optionals (enableNOSV || enableOVNI) [
|
||||||
|
(lib.cmakeBool "ENABLE_NOSV" enableNOSV)
|
||||||
|
(lib.cmakeBool "ENABLE_OVNI" enableOVNI)
|
||||||
|
] ++ lib.optionals (!isCross && enableDistroVariants) [
|
||||||
|
(lib.cmakeFeature "KERNELLIB_HOST_CPU_VARIANTS" "distro") # TODO: check if we can do it when cross compiling
|
||||||
|
] ++ lib.optionals isCross [
|
||||||
|
(lib.cmakeFeature "CMAKE_SYSTEM_NAME" "Linux")
|
||||||
|
(lib.cmakeFeature "CMAKE_FIND_ROOT_PATH_MODE_PROGRAM" "NEVER")
|
||||||
|
(lib.cmakeFeature "CMAKE_FIND_ROOT_PATH_MODE_LIBRARY" "ONLY")
|
||||||
|
(lib.cmakeFeature "CMAKE_FIND_ROOT_PATH_MODE_INCLUDE" "ONLY")
|
||||||
|
(lib.cmakeFeature "CMAKE_FIND_ROOT_PATH_MODE_PACKAGE" "ONLY")
|
||||||
|
] ++ lib.optionals stdenv.hostPlatform.isRiscV [
|
||||||
|
(lib.cmakeFeature "LLC_TRIPLE" "riscv64-unknown-linux-gnu")
|
||||||
|
(lib.cmakeFeature "LLC_HOST_CPU" "rv64g")
|
||||||
|
(lib.cmakeFeature "CLANG_MARCH_FLAG" "-march=")
|
||||||
|
];
|
||||||
|
|
||||||
|
# Fixes error: ld: cannot find -lgcc / -lgcc_s when linking from libpocl on
|
||||||
|
# host
|
||||||
|
preConfigure = ''
|
||||||
|
cmakeFlagsArray+=(
|
||||||
|
-DEXTRA_HOST_LD_FLAGS="${lib.escapeShellArg (builtins.readFile "${stdenv.cc}/nix-support/cc-ldflags")}"
|
||||||
|
-DEXTRA_KERNEL_FLAGS="${lib.escapeShellArg (builtins.readFile "${stdenv.cc}/nix-support/cc-ldflags")}"
|
||||||
|
)
|
||||||
|
'' + lib.optionalString stdenv.hostPlatform.isRiscV ''
|
||||||
|
cmakeFlagsArray+=(
|
||||||
|
-DEXTRA_HOST_LLC_FLAGS=${lib.escapeShellArg ([
|
||||||
|
"-march=rv64g"
|
||||||
|
"-mcpu=sifive-u74"
|
||||||
|
])}
|
||||||
|
-DEXTRA_HOST_CLANG_FLAGS=${lib.escapeShellArg ([
|
||||||
|
"-mabi=lp64d"
|
||||||
|
"-march=rv64g"
|
||||||
|
"-mcpu=sifive-u74"
|
||||||
|
"-mtune=sifive-7-series"
|
||||||
|
])}
|
||||||
|
)
|
||||||
|
'';
|
||||||
|
|
||||||
|
nativeBuildInputs = [
|
||||||
|
cmake
|
||||||
|
getconf
|
||||||
|
ninja
|
||||||
|
pkg-config
|
||||||
|
python3
|
||||||
|
];
|
||||||
|
|
||||||
|
buildInputs = [
|
||||||
|
opencl-headers
|
||||||
|
llvmPackages.libclang
|
||||||
|
llvmPackages.llvm
|
||||||
|
] ++ lib.optionals staticLLVM [ libxml2 ]
|
||||||
|
++ lib.optionals enableNOSV [ nosv ]
|
||||||
|
++ lib.optionals enableOVNI [ ovni ]
|
||||||
|
++ lib.optionals enableHWLOC [ hwloc ]
|
||||||
|
++ lib.optionals enableTBB [ tbb ]
|
||||||
|
++ lib.optionals enableICD [ ocl-icd ]
|
||||||
|
++ lib.optionals enableLTTNG [ lttng-ust ]
|
||||||
|
++ lib.optionals enableSPIRV [
|
||||||
|
(spirv-llvm-translator.override { inherit (llvmPackages) llvm; })
|
||||||
|
spirv-tools
|
||||||
|
];
|
||||||
|
|
||||||
|
nativeInstallCheckInputs = [
|
||||||
|
writableTmpDirAsHomeHook
|
||||||
|
];
|
||||||
|
|
||||||
|
doInstallCheck = true;
|
||||||
|
|
||||||
|
installCheckPhase = lib.optionalString enableICD ''
|
||||||
|
runHook preInstallCheck
|
||||||
|
|
||||||
|
export OCL_ICD_VENDORS=$out/etc/OpenCL/vendors
|
||||||
|
$out/bin/poclcc -o poclcc.cl.pocl $src/examples/poclcc/poclcc.cl
|
||||||
|
|
||||||
|
runHook postInstallCheck
|
||||||
|
'';
|
||||||
|
|
||||||
|
setupHook = ./setup-hook.sh;
|
||||||
|
|
||||||
|
passthru = {
|
||||||
|
updateScript = nix-update-script { };
|
||||||
|
git = finalAttrs.finalPackage.override { useGit = true; };
|
||||||
|
test = finalAttrs.finalPackage.overrideAttrs { doCheck = true; };
|
||||||
|
};
|
||||||
|
|
||||||
|
requiredSystemFeatures = lib.optionals (finalAttrs.finalPackage.doCheck && enableHWLOC) [ "sys-devices" ];
|
||||||
|
|
||||||
|
preCheck = ''
|
||||||
|
export POCL_DEBUG=error,warn
|
||||||
|
export NIX_DEBUG=1
|
||||||
|
'';
|
||||||
|
|
||||||
|
propagatedBuildInputs = [ stdenv.cc.cc ];
|
||||||
|
|
||||||
|
meta = with lib; {
|
||||||
|
description = "A portable open source (MIT-licensed) implementation of the OpenCL standard";
|
||||||
|
homepage = "http://portablecl.org";
|
||||||
|
license = licenses.mit;
|
||||||
|
maintainers = with maintainers; [
|
||||||
|
leixb
|
||||||
|
jansol
|
||||||
|
xddxdd
|
||||||
|
bsc.maintainers.leixb
|
||||||
|
];
|
||||||
|
platforms = platforms.linux ++ platforms.darwin;
|
||||||
|
};
|
||||||
|
})
|
||||||
6
pkgs/pocl/setup-hook.sh
Normal file
6
pkgs/pocl/setup-hook.sh
Normal file
@ -0,0 +1,6 @@
|
|||||||
|
preCheckHooks+=('setupPoclCheck')
|
||||||
|
preInstallCheckHooks+=('setupPoclCheck')
|
||||||
|
|
||||||
|
setupPoclCheck () {
|
||||||
|
export OCL_ICD_VENDORS="@out@/etc/OpenCL/vendors"
|
||||||
|
}
|
||||||
68
pkgs/tacuda/default.nix
Normal file
68
pkgs/tacuda/default.nix
Normal file
@ -0,0 +1,68 @@
|
|||||||
|
{ stdenv
|
||||||
|
, fetchFromGitHub
|
||||||
|
, automake
|
||||||
|
, autoconf
|
||||||
|
, libtool
|
||||||
|
, gnumake
|
||||||
|
, autoreconfHook
|
||||||
|
, boost
|
||||||
|
, cudaPackages
|
||||||
|
|
||||||
|
, useGit ? false
|
||||||
|
, gitUrl ? "git@gitlab-internal.bsc.es:task-awareness/tacuda/tacuda.git"
|
||||||
|
, gitBranch ? "main"
|
||||||
|
, gitCommit ? "35234f9445e6149a2bd38d119841e2485d6ee05e"
|
||||||
|
}:
|
||||||
|
|
||||||
|
let
|
||||||
|
|
||||||
|
release_ver = "2.1.0";
|
||||||
|
release = {
|
||||||
|
version = release_ver;
|
||||||
|
src = fetchFromGitHub {
|
||||||
|
owner = "bsc-pm";
|
||||||
|
repo = "tacuda";
|
||||||
|
rev = release_ver;
|
||||||
|
hash = "sha256-Cj3EiLVJSLvRv0ydeg7Vp4SpkniEqHkcWF+YOJQ8EcM=";
|
||||||
|
};
|
||||||
|
};
|
||||||
|
|
||||||
|
git = rec {
|
||||||
|
version = src.shortRev;
|
||||||
|
src = builtins.fetchGit {
|
||||||
|
url = gitUrl;
|
||||||
|
ref = gitBranch;
|
||||||
|
rev = gitCommit;
|
||||||
|
};
|
||||||
|
};
|
||||||
|
|
||||||
|
source = if (useGit) then git else release;
|
||||||
|
|
||||||
|
in
|
||||||
|
|
||||||
|
stdenv.mkDerivation {
|
||||||
|
pname = "tacuda";
|
||||||
|
inherit (source) src version;
|
||||||
|
|
||||||
|
enableParallelBuilding = true;
|
||||||
|
separateDebugInfo = true;
|
||||||
|
|
||||||
|
nativeBuildInputs = [
|
||||||
|
autoreconfHook
|
||||||
|
automake
|
||||||
|
autoconf
|
||||||
|
libtool
|
||||||
|
gnumake
|
||||||
|
];
|
||||||
|
|
||||||
|
patches = [ ./fix_config.patch ];
|
||||||
|
|
||||||
|
configureFlags = [ "--with-cuda-include=${cudaPackages.cudatoolkit}/include" ];
|
||||||
|
|
||||||
|
buildInputs = [
|
||||||
|
boost
|
||||||
|
cudaPackages.libcublas
|
||||||
|
cudaPackages.cuda_cudart
|
||||||
|
];
|
||||||
|
|
||||||
|
}
|
||||||
13
pkgs/tacuda/fix_config.patch
Normal file
13
pkgs/tacuda/fix_config.patch
Normal file
@ -0,0 +1,13 @@
|
|||||||
|
diff --git a/m4/cuda.m4 b/m4/cuda.m4
|
||||||
|
index 23f5c94..8f9b534 100644
|
||||||
|
--- a/m4/cuda.m4
|
||||||
|
+++ b/m4/cuda.m4
|
||||||
|
@@ -40,7 +40,7 @@ search_libs="cuda cublas cudart"
|
||||||
|
required_libs=""
|
||||||
|
|
||||||
|
m4_foreach([function],
|
||||||
|
- [cuInit,
|
||||||
|
+ [
|
||||||
|
cublasSgemm,
|
||||||
|
cudaStreamCreate,
|
||||||
|
cudaLaunchKernel,
|
||||||
46
pkgs/taopencl/default.nix
Normal file
46
pkgs/taopencl/default.nix
Normal file
@ -0,0 +1,46 @@
|
|||||||
|
{
|
||||||
|
stdenv
|
||||||
|
, automake
|
||||||
|
, autoconf
|
||||||
|
, libtool
|
||||||
|
, gnumake
|
||||||
|
, boost
|
||||||
|
, mpi
|
||||||
|
, gcc
|
||||||
|
, autoreconfHook
|
||||||
|
, ocl-icd
|
||||||
|
, opencl-headers
|
||||||
|
}:
|
||||||
|
|
||||||
|
stdenv.mkDerivation (finalAttrs: {
|
||||||
|
pname = "taopencl";
|
||||||
|
version = finalAttrs.src.shortRev;
|
||||||
|
|
||||||
|
src = builtins.fetchGit {
|
||||||
|
url = "git@gitlab-internal.bsc.es:task-awareness/taopencl/taopencl.git";
|
||||||
|
ref = "master";
|
||||||
|
rev = "c3b7b32ae8fa4af7ceff598532a881f8f1490aaf";
|
||||||
|
};
|
||||||
|
|
||||||
|
enableParallelBuilding = true;
|
||||||
|
separateDebugInfo = true;
|
||||||
|
|
||||||
|
configureFlags = [
|
||||||
|
"--with-opencl-lib=${ocl-icd}/lib"
|
||||||
|
"--with-opencl-include=${opencl-headers}/include"
|
||||||
|
];
|
||||||
|
|
||||||
|
buildInputs = [
|
||||||
|
autoreconfHook
|
||||||
|
automake
|
||||||
|
autoconf
|
||||||
|
libtool
|
||||||
|
gnumake
|
||||||
|
boost
|
||||||
|
mpi
|
||||||
|
gcc
|
||||||
|
];
|
||||||
|
|
||||||
|
dontDisableStatic = true;
|
||||||
|
hardeningDisable = [ "all" ];
|
||||||
|
})
|
||||||
87
pkgs/tasycl/default.nix
Normal file
87
pkgs/tasycl/default.nix
Normal file
@ -0,0 +1,87 @@
|
|||||||
|
{
|
||||||
|
lib,
|
||||||
|
stdenv,
|
||||||
|
autoconf,
|
||||||
|
automake,
|
||||||
|
autoreconfHook,
|
||||||
|
boost,
|
||||||
|
fetchFromGitHub,
|
||||||
|
gnumake,
|
||||||
|
libtool,
|
||||||
|
withCFlags,
|
||||||
|
|
||||||
|
useIntel ? true,
|
||||||
|
adaptivecpp ? null,
|
||||||
|
intelPackages ? null,
|
||||||
|
|
||||||
|
useGit ? false,
|
||||||
|
gitUrl ? "git@gitlab-internal.bsc.es:task-awareness/tasycl/tasycl.git",
|
||||||
|
gitBranch ? "main",
|
||||||
|
gitCommit ? "78f98dcf60a66e0eaa3b4ebcf55be076bec64825",
|
||||||
|
}:
|
||||||
|
|
||||||
|
assert !useIntel -> adaptivecpp != null;
|
||||||
|
assert useIntel -> intelPackages != null;
|
||||||
|
|
||||||
|
let
|
||||||
|
variant = if useIntel then "intel" else "acpp";
|
||||||
|
|
||||||
|
syclStdenv = withCFlags [ "-O3" ] (if useIntel then intelPackages.stdenv else stdenv);
|
||||||
|
|
||||||
|
release = rec {
|
||||||
|
version = "2.1.0";
|
||||||
|
src = fetchFromGitHub {
|
||||||
|
owner = "bsc-pm";
|
||||||
|
repo = "tasycl";
|
||||||
|
rev = version;
|
||||||
|
hash = "sha256-0kXnb0lHeQNHR27GTLbJ8xbiICLU8k2+FqEnnFSrzzo=";
|
||||||
|
};
|
||||||
|
};
|
||||||
|
|
||||||
|
git = rec {
|
||||||
|
version = src.shortRev;
|
||||||
|
src = builtins.fetchGit {
|
||||||
|
url = gitUrl;
|
||||||
|
ref = gitBranch;
|
||||||
|
rev = gitCommit;
|
||||||
|
};
|
||||||
|
};
|
||||||
|
|
||||||
|
source = if (useGit) then git else release;
|
||||||
|
|
||||||
|
in
|
||||||
|
|
||||||
|
syclStdenv.mkDerivation {
|
||||||
|
pname = "tasycl-${variant}";
|
||||||
|
inherit (source) src version;
|
||||||
|
|
||||||
|
enableParallelBuilding = true;
|
||||||
|
separateDebugInfo = true;
|
||||||
|
|
||||||
|
nativeBuildInputs = [
|
||||||
|
autoreconfHook
|
||||||
|
automake
|
||||||
|
autoconf
|
||||||
|
libtool
|
||||||
|
gnumake
|
||||||
|
];
|
||||||
|
|
||||||
|
buildInputs = [
|
||||||
|
boost
|
||||||
|
];
|
||||||
|
|
||||||
|
configureFlags = lib.optionals (!useIntel) [
|
||||||
|
"CXX=${lib.getExe adaptivecpp}"
|
||||||
|
];
|
||||||
|
|
||||||
|
# add symlinks so we can explicitly link with tasycl-intel / tasycl-acpp
|
||||||
|
postInstall = ''
|
||||||
|
pushd $out/lib
|
||||||
|
for i in libtasycl* ; do
|
||||||
|
ln -s "$i" "''\${i/tasycl/tasycl-${variant}}"
|
||||||
|
done
|
||||||
|
popd
|
||||||
|
'';
|
||||||
|
|
||||||
|
hardeningDisable = [ "all" ];
|
||||||
|
}
|
||||||
55
test/compilers/hello-sycl.nix
Normal file
55
test/compilers/hello-sycl.nix
Normal file
@ -0,0 +1,55 @@
|
|||||||
|
{ intelPackages, writeText, strace }:
|
||||||
|
|
||||||
|
let
|
||||||
|
stdenv = intelPackages.stdenv;
|
||||||
|
hello_sycl = writeText "hello.cpp" ''
|
||||||
|
#include <sycl/sycl.hpp>
|
||||||
|
|
||||||
|
class hello_world;
|
||||||
|
|
||||||
|
int main(int argc, char** argv) try {
|
||||||
|
auto device_selector = sycl::default_selector_v;
|
||||||
|
|
||||||
|
sycl::queue queue(device_selector);
|
||||||
|
|
||||||
|
std::cout << "Running on: "
|
||||||
|
<< queue.get_device().get_info<sycl::info::device::name>()
|
||||||
|
<< std::endl;
|
||||||
|
|
||||||
|
queue.submit([&] (sycl::handler& cgh) {
|
||||||
|
auto os = sycl::stream{128, 128, cgh};
|
||||||
|
cgh.single_task<hello_world>([=]() {
|
||||||
|
os << "Hello World! (on device)\n";
|
||||||
|
});
|
||||||
|
});
|
||||||
|
|
||||||
|
return 0;
|
||||||
|
} catch (sycl::exception &e) {
|
||||||
|
std::cout << "SYCL exception: " << e.what() << std::endl;
|
||||||
|
return 0; // we excpect to fail since no devices should be available;
|
||||||
|
}
|
||||||
|
'';
|
||||||
|
in
|
||||||
|
|
||||||
|
stdenv.mkDerivation {
|
||||||
|
version = "0.0.1";
|
||||||
|
name = "hello-sycl";
|
||||||
|
buildInputs = [ stdenv strace ];
|
||||||
|
src = hello_sycl;
|
||||||
|
dontUnpack = true;
|
||||||
|
dontConfigure = true;
|
||||||
|
NIX_DEBUG = 0;
|
||||||
|
buildPhase = ''
|
||||||
|
cp $src hello.cpp
|
||||||
|
set -x
|
||||||
|
echo CXX=$CXX
|
||||||
|
command -v $CXX
|
||||||
|
$CXX -fsycl hello.cpp -o hello
|
||||||
|
./hello
|
||||||
|
set +x
|
||||||
|
'';
|
||||||
|
|
||||||
|
installPhase = ''
|
||||||
|
touch $out
|
||||||
|
'';
|
||||||
|
}
|
||||||
74
test/compilers/icpx-ompss2.nix
Normal file
74
test/compilers/icpx-ompss2.nix
Normal file
@ -0,0 +1,74 @@
|
|||||||
|
{ writeText, intelPackages, nodes, nosv, clangOmpss2Nodes, strace }:
|
||||||
|
|
||||||
|
let
|
||||||
|
hello_cpp = writeText "hello.cpp" ''
|
||||||
|
#include <cstdio>
|
||||||
|
#include <sycl/sycl.hpp>
|
||||||
|
|
||||||
|
int main(int argc, char** argv) try {
|
||||||
|
sycl::queue queue;
|
||||||
|
|
||||||
|
std::cout << "Running on: "
|
||||||
|
<< queue.get_device().get_info<sycl::info::device::name>()
|
||||||
|
<< std::endl;
|
||||||
|
|
||||||
|
#pragma oss task
|
||||||
|
queue.submit([&] (sycl::handler& cgh) {
|
||||||
|
auto os = sycl::stream{128, 128, cgh};
|
||||||
|
cgh.single_task<class hello_world>([=]() {
|
||||||
|
os << "Hello World! (on device)\n";
|
||||||
|
});
|
||||||
|
}).wait();
|
||||||
|
|
||||||
|
return 0;
|
||||||
|
} catch (sycl::exception &e) {
|
||||||
|
std::cout << "SYCL exception: " << e.what() << std::endl;
|
||||||
|
return 0; // we expect to fail since no devices should be available;
|
||||||
|
}
|
||||||
|
|
||||||
|
'';
|
||||||
|
in
|
||||||
|
|
||||||
|
intelPackages.stdenv.mkDerivation {
|
||||||
|
version = "0.0.1";
|
||||||
|
name = "hello-syclompss";
|
||||||
|
|
||||||
|
src = hello_cpp;
|
||||||
|
|
||||||
|
nativeBuildInputs = [
|
||||||
|
strace
|
||||||
|
nodes
|
||||||
|
nosv
|
||||||
|
];
|
||||||
|
|
||||||
|
dontUnpack = true;
|
||||||
|
dontConfigure = true;
|
||||||
|
|
||||||
|
# NODES requires access to /sys/devices to request NUMA information
|
||||||
|
requiredSystemFeatures = [ "sys-devices" ];
|
||||||
|
|
||||||
|
env.NODES_HOME = nodes;
|
||||||
|
|
||||||
|
NIX_DEBUG = 1;
|
||||||
|
buildPhase = ''
|
||||||
|
cp $src hello.cpp
|
||||||
|
set -x
|
||||||
|
echo CXX=$CXX
|
||||||
|
echo NODES_HOME=$NODES_HOME
|
||||||
|
command -v $CXX
|
||||||
|
|
||||||
|
icpx -Wno-deprecated-declarations -fsycl \
|
||||||
|
-fsycl-host-compiler=${clangOmpss2Nodes.forIcpx}/bin/clang++ \
|
||||||
|
-fsycl-host-compiler-options='-Wno-deprecated-declarations -fompss-2=libnodes' \
|
||||||
|
-lnodes -lnosv \
|
||||||
|
$NODES_HOME/lib/nodes-main-wrapper.o \
|
||||||
|
hello.cpp -o hello
|
||||||
|
|
||||||
|
./hello
|
||||||
|
set +x
|
||||||
|
'';
|
||||||
|
|
||||||
|
installPhase = ''
|
||||||
|
touch $out
|
||||||
|
'';
|
||||||
|
}
|
||||||
26
test/compilers/pocl.nix
Normal file
26
test/compilers/pocl.nix
Normal file
@ -0,0 +1,26 @@
|
|||||||
|
{
|
||||||
|
runCommand,
|
||||||
|
pocl,
|
||||||
|
clinfo,
|
||||||
|
writableTmpDirAsHomeHook,
|
||||||
|
}:
|
||||||
|
|
||||||
|
runCommand "clinfo-pocl"
|
||||||
|
{
|
||||||
|
nativeBuildInputs = [
|
||||||
|
clinfo
|
||||||
|
writableTmpDirAsHomeHook
|
||||||
|
];
|
||||||
|
|
||||||
|
requiredSystemFeatures = [ "sys-devices" ];
|
||||||
|
|
||||||
|
env = {
|
||||||
|
POCL_DEBUG = "error,warn";
|
||||||
|
OCL_ICD_VENDORS = "${pocl}/etc/OpenCL/vendors";
|
||||||
|
};
|
||||||
|
}
|
||||||
|
''
|
||||||
|
set -x
|
||||||
|
clinfo | tee $out
|
||||||
|
set +x
|
||||||
|
''
|
||||||
Loading…
x
Reference in New Issue
Block a user