Merge all branches

flake.nix

@@ -3,16 +3,34 @@
 
   outputs = { self, nixpkgs, ...}:
   let
+    system = "x86_64-linux";
     pkgs = import nixpkgs {
+      inherit system;
       # For now we only support x86
-      system = "x86_64-linux";
       overlays = [ self.overlays.default ];
     };
   in
     {
       bscOverlay = import ./overlay.nix;
       overlays.default = self.bscOverlay;
-      legacyPackages.x86_64-linux = pkgs;
+ 
+      # full nixpkgs with our overlay applied
+      legacyPackages.${system} = pkgs;
+ 
+      # packages added by our overlay
+      packages.${system} =
+        let
+          inherit (builtins) attrNames removeAttrs;
+          inherit (nixpkgs.lib) flip filterAttrs getAttrs pipe isDerivation;
+        in
+          # extract the names of the packages from the overlay, then get the
+          # actual packages from the full package set with the overlay applied
+          pipe (self.overlays.default null { inherit (nixpkgs) lib; } ) [
+            attrNames
+            (flip getAttrs pkgs)
+            (flip removeAttrs [ "bsc" ])
+            (filterAttrs (_: isDerivation))
+          ];
 
       # propagate nixpkgs lib, so we can do bscpkgs.lib
       inherit (nixpkgs) lib;

overlay.nix

@@ -1,15 +1,22 @@
 final: /* Future last stage */
 prev:  /* Previous stage */
 
-with final.lib;
-
 let
-  callPackage = final.callPackage;
+  inherit (prev.lib) collect isDerivation mapAttrs;
+
+  inherit (final) callPackage;
 
   mkDeps = name: pkgs: final.runCommand name { }
     "printf '%s\n' ${toString (collect (x: x ? outPath) pkgs)} > $out";
 
-  bscPkgs = {
+  mkStrict = drv: if (isDerivation drv && drv ? overrideAttrs && !(drv ? strictDeps))
+    then drv.overrideAttrs { strictDeps = true; }
+    else drv;
+
+  bscPkgs = mapAttrs (_: mkStrict) {
+    aoccUnwrapped = callPackage ./pkgs/aocc/unwrapped.nix { };
+    aocc = callPackage ./pkgs/aocc/default.nix { };
+    stdenvAocc = final.overrideCC final.stdenv final.aocc;
     bench6 = callPackage ./pkgs/bench6/default.nix { };
     bigotes = callPackage ./pkgs/bigotes/default.nix { };
     clangOmpss2 = callPackage ./pkgs/llvm-ompss2/default.nix { };
@@ -17,6 +24,7 @@ let
     clangOmpss2Nodes = callPackage ./pkgs/llvm-ompss2/default.nix { ompss2rt = final.nodes; openmp = final.openmp; };
     clangOmpss2NodesOmpv = callPackage ./pkgs/llvm-ompss2/default.nix { ompss2rt = final.nodes; openmp = final.openmpv; };
     clangOmpss2Unwrapped = callPackage ./pkgs/llvm-ompss2/clang.nix { };
+    clsparse = callPackage ./pkgs/clsparse/package.nix { };
     #extrae = callPackage ./pkgs/extrae/default.nix { }; # Broken and outdated
     gpi-2 = callPackage ./pkgs/gpi-2/default.nix { };
     intel-apt = callPackage ./pkgs/intel-oneapi/packages.nix { };
@@ -51,6 +59,7 @@ let
     stdenvClangOmpss2NodesOmpv = final.stdenv.override { cc = final.clangOmpss2NodesOmpv; allowedRequisites = null; };
     tagaspi = callPackage ./pkgs/tagaspi/default.nix { };
     tampi = callPackage ./pkgs/tampi/default.nix { };
+    taopencl = callPackage ./pkgs/taopencl/default.nix { };
     tasycl = callPackage ./pkgs/tasycl/default.nix { };
     tasycl-acpp = callPackage ./pkgs/tasycl/default.nix { useIntel = false; };
     wxparaver = callPackage ./pkgs/paraver/default.nix { };

pkgs/aocc/default.nix

@@ -0,0 +1,16 @@
+{ wrapCCWith
+, aoccUnwrapped
+}:
+
+let
+  cc = aoccUnwrapped;
+in wrapCCWith {
+  inherit cc;
+
+  extraBuildCommands = ''
+    echo "-isystem ${cc}/include" >> $out/nix-support/cc-cflags
+
+    wrap aocc   $wrapper $ccPath/clang
+    wrap aocc++ $wrapper $ccPath/clang++
+  '';
+}

pkgs/aocc/unwrapped.nix

@@ -0,0 +1,51 @@
+{ lib
+, fetchurl
+, stdenv
+, autoPatchelfHook
+, rocmPackages
+, zlib
+, libffi
+, elfutils
+}:
+
+let
+  # in newer nixpkgs the runtime is hsakmt
+  rocmRuntime =
+    if rocmPackages ? hsakmt then
+      rocmPackages.hsakmt
+    else
+      rocmPackages.rocm-runtime;
+in
+stdenv.mkDerivation {
+  pname = "aocc-compiler";
+  version = "5.0.0";
+
+  src = fetchurl {
+    url = "https://download.amd.com/developer/eula/aocc/aocc-5-0/aocc-compiler-5.0.0.tar";
+    sha256 = "sha256-lm+sLSx1np3m6WnBCtp6ezBsET9/HgfqN2gp7IY4Dao=";
+  };
+
+  nativeBuildInputs = [ autoPatchelfHook ];
+  buildInputs = [
+    elfutils
+    zlib
+    rocmRuntime
+    stdenv.cc.cc.lib
+  ];
+  phases = [ "unpackPhase" "installPhase" "fixupPhase" ];
+  dontStrip = true;
+
+  installPhase = ''
+    mkdir -p $out
+    cp -a . $out/
+
+    ln -s ${lib.getLib libffi}/lib/libffi.so $out/lib/libffi.so.6
+  '';
+
+  passthru = {
+    inherit rocmRuntime;
+    isClang = true; # Needed for wrapCCWith
+  };
+
+  meta.mainProgram = "clang";
+}

pkgs/bench6/default.nix

@@ -27,10 +27,13 @@ stdenv.mkDerivation rec {
     rev = gitCommit;
   };
 
-  buildInputs = [
-    bigotes
+  nativeBuildInputs = [
     cmake
     clangOmpss2
+  ];
+
+  buildInputs = [
+    bigotes
     openmp
     openmpv
     nanos6

pkgs/bigotes/default.nix

@@ -4,7 +4,7 @@
 , cmake
 }:
 
-stdenv.mkDerivation rec {
+stdenv.mkDerivation {
   pname = "bigotes";
   version = "9dce13";
   src = fetchFromGitHub {
@@ -13,5 +13,5 @@ stdenv.mkDerivation rec {
     rev = "9dce13446a8da30bea552d569d260d54e0188518";
     sha256 = "sha256-ktxM3pXiL8YXSK+/IKWYadijhYXqGoLY6adLk36iigE=";
   };
-  buildInputs = [ cmake ];
+  nativeBuildInputs = [ cmake ];
 }

pkgs/clsparse/install_target.patch

@@ -0,0 +1,53 @@
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index 3d139ed..15ffc14 100644
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -176,32 +179,22 @@ if( BUILD_clSPARSE OR BUILD_SAMPLES )
+   if( BUILD_clSPARSE )
+     message( STATUS "Setting up clSPARSE external..." )
+ 
+-    if ( BUILD_SAMPLES )
+-      # If the user elects to build samples, then we must build and install clSPARSE
+-      # The install location is set as a subdirectory of the SuperBuild
+-      ExternalProject_Add(
+-        clSPARSE
+-        DEPENDS ${clSPARSE.Dependencies}
+-        SOURCE_DIR ${PROJECT_SOURCE_DIR}/src
+-        BINARY_DIR clSPARSE-build
+-        INSTALL_DIR clSPARSE-package
+-        CMAKE_ARGS ${clSPARSE.Cmake.Args} -DCMAKE_BUILD_TYPE=${CMAKE_BUILD_TYPE}
+-        -DBUILD_CLVERSION=${BUILD_CLVERSION} -DCMAKE_INSTALL_PREFIX=<INSTALL_DIR>
+-        -DUSE_SYSTEM_CL2HPP:BOOL=${USE_SYSTEM_CL2HPP}
+-      )
+-    else( )
+-      # If the user does not want to build samples, then build clSPARSE but don't automatically
+-      # install it
+-      ExternalProject_Add(
+-        clSPARSE
+-        DEPENDS ${clSPARSE.Dependencies}
+-        SOURCE_DIR ${PROJECT_SOURCE_DIR}/src
+-        BINARY_DIR clSPARSE-build
+-        CMAKE_ARGS ${clSPARSE.Cmake.Args} -DCMAKE_BUILD_TYPE=${CMAKE_BUILD_TYPE}
+-        -DBUILD_CLVERSION=${BUILD_CLVERSION} -DUSE_SYSTEM_CL2HPP:BOOL=${USE_SYSTEM_CL2HPP}
+-        INSTALL_COMMAND ""
+-      )
+-    endif( )
++    ExternalProject_Add(
++      clSPARSE
++      DEPENDS ${clSPARSE.Dependencies}
++      SOURCE_DIR ${PROJECT_SOURCE_DIR}/src
++      BINARY_DIR clSPARSE-build
++      INSTALL_DIR clSPARSE-package
++      CMAKE_ARGS ${clSPARSE.Cmake.Args} -DCMAKE_BUILD_TYPE=${CMAKE_BUILD_TYPE}
++      -DBUILD_CLVERSION=${BUILD_CLVERSION} -DCMAKE_INSTALL_PREFIX=<INSTALL_DIR>
++      -DUSE_SYSTEM_CL2HPP:BOOL=${USE_SYSTEM_CL2HPP}
++    )
++
++    install(
++      DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/clSPARSE-package/
++      DESTINATION ${CMAKE_INSTALL_PREFIX}
++      USE_SOURCE_PERMISSIONS
++    )
+ 
+   endif( )
+ 

pkgs/clsparse/package.nix

@@ -0,0 +1,70 @@
+{
+  lib,
+  stdenv,
+  fetchFromGitHub,
+  fetchpatch,
+  boost,
+  gtest,
+  ocl-icd,
+  opencl-headers,
+  opencl-clhpp,
+  cmake,
+}:
+
+stdenv.mkDerivation rec {
+  pname = "clsparse";
+  version = "0.10.2.0";
+
+  src = fetchFromGitHub {
+    owner = "clMathLibraries";
+    repo = "clSPARSE";
+    rev = "v${version}";
+    hash = "sha256-jIauCtUyPEIx7pFI3qH0WagV+t/fvro0OsGgONBJm0s=";
+  };
+
+  patches = [
+    ./pass_include_dir.patch
+    ./install_target.patch
+    (fetchpatch {
+      name = "remove-gettypecode.patch";
+      url = "https://patch-diff.githubusercontent.com/raw/clMathLibraries/clSPARSE/pull/210.patch";
+      hash = "sha256-9Q+tk7RMdWE4MCnbvWlsI0MIgBYKIWR2jIC1bICtIjU=";
+    })
+  ];
+
+  postInstallPhase = ''
+    mv $installDir/lib64 lib
+    ln -s lib/ lib64
+  '';
+
+  env.NIX_CFLAGS_COMPILE = "-std=c++17";
+
+  nativeBuildInputs = [
+    cmake
+  ];
+
+  buildInputs = [
+    boost
+    ocl-icd
+    opencl-headers
+    opencl-clhpp
+  ];
+
+  cmakeFlags = [
+    "-DBUILD_Boost=OFF"
+    "-DBUILD_gMock=OFF"
+    "-DBUILD_MTX=OFF"
+    "-DBUILD_SAMPLES=OFF"
+    "-DUSE_SYSTEM_CL2HPP=ON"
+    "-DGMOCK_ROOT=${gtest}"
+    "-DGTEST_INCLUDE_DIR=${gtest.src}/googletest/include"
+  ];
+
+  meta = {
+    description = "A software library containing Sparse functions written in OpenCL";
+    homepage = "https://github.com/clMathLibraries/clSPARSE";
+    license = lib.licenses.asl20;
+    maintainers = with lib.maintainers; [ leixb ];
+    platforms = lib.platforms.all;
+  };
+}

pkgs/clsparse/pass_include_dir.patch

@@ -0,0 +1,14 @@
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index 3d139ed..b7ea2d3 100644
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -132,6 +132,9 @@ else( )
+       set( GMOCK_ROOT "$ENV{GMOCK_ROOT}" )
+     endif( )
+     list( APPEND clSPARSE.Cmake.Args -DGTEST_ROOT=${GMOCK_ROOT} )
++    if( DEFINED GTEST_INCLUDE_DIR )
++      list( APPEND clSPARSE.Cmake.Args -DGTEST_INCLUDE_DIR=${GTEST_INCLUDE_DIR} )
++    endif( )
+   endif( )
+ endif( )
+ 

pkgs/intel-oneapi/2023.nix

@@ -96,14 +96,17 @@ let
       "intel-oneapi-mpi-${version}"
     ];
 
-    buildInputs = [
+    nativeBuildInputs = [
+      autoPatchelfHook
       rsync
+    ];
+
+    buildInputs = [
       libfabric
       zlib
       stdenv.cc.cc.lib
     ];
 
-    nativeBuildInputs = [ autoPatchelfHook ];
     phases = [ "installPhase" "fixupPhase" ];
     dontStrip = true;
     installPhase = ''
@@ -142,7 +145,6 @@ let
 
     buildInputs = [
       intel-mpi
-      rsync
       libffi_3_3
       libelf
       libxml2
@@ -150,7 +152,10 @@ let
       stdenv.cc.cc.lib
     ];
 
-    nativeBuildInputs = [ autoPatchelfHook ];
+    nativeBuildInputs = [
+      autoPatchelfHook
+      rsync
+    ];
     phases = [ "installPhase" "fixupPhase" ];
     dontStrip = true;
 
@@ -180,7 +185,6 @@ let
     buildInputs = [
       intel-mpi
       intel-tbb
-      rsync
       libffi_3_3
       libelf
       libxml2
@@ -189,7 +193,10 @@ let
       stdenv.cc.cc.lib
     ];
 
-    nativeBuildInputs = [ autoPatchelfHook ];
+    nativeBuildInputs = [
+      autoPatchelfHook
+      rsync
+    ];
     phases = [ "installPhase" "fixupPhase" ];
     dontStrip = true;
 
@@ -242,7 +249,6 @@ let
     buildInputs = [
       intel-mpi
       intel-compiler-shared
-      rsync
       libffi_3_3
       libelf
       libxml2
@@ -250,7 +256,10 @@ let
       stdenv.cc.cc.lib
     ];
 
-    nativeBuildInputs = [ autoPatchelfHook ];
+    nativeBuildInputs = [
+      autoPatchelfHook
+      rsync
+    ];
 
     phases = [ "installPhase" "fixupPhase" ];
 
@@ -325,7 +334,6 @@ let
 
     buildInputs = [
       intel-compiler-shared
-      rsync
       libffi_3_3
       libelf
       libxml2
@@ -333,7 +341,10 @@ let
       stdenv.cc.cc.lib
     ];
 
-    nativeBuildInputs = [ autoPatchelfHook ];
+    nativeBuildInputs = [
+      autoPatchelfHook
+      rsync
+    ];
     autoPatchelfIgnoreMissingDeps = [ "libtbb.so.12" "libtbbmalloc.so.2" "libze_loader.so.1" ];
 
     phases = [ "installPhase" "fixupPhase" ];

pkgs/llvm-ompss2/clang.nix

@@ -43,32 +43,36 @@ let
 
   source = if (useGit) then git else release;
 
-in stdenv.mkDerivation rec {
+in stdenv.mkDerivation {
   pname = "clang-ompss2";
   inherit (source) src version;
 
   enableParallelBuilding = true;
-  isClang = true;
 
   passthru = {
     CC = "clang";
     CXX = "clang++";
+
+    isClang = true;
+    isClangWithOmpss = true;
+
+    inherit gcc zlib;
   };
 
-  isClangWithOmpss = true;
-
-  nativeBuildInputs = [ zlib ];
-
-  buildInputs = [
-    which
+  nativeBuildInputs = [
     bash
+    cmake
+    elfutils
+    llvmPackages_latest.lld
+    pkg-config
     python3
     perl
-    cmake
-    llvmPackages_latest.lld
-    elfutils
+    which
+    zlib
+  ];
+
+  buildInputs = [
     libffi
-    pkg-config
     zlib
     gcc.cc.lib # Required for libstdc++.so.6
   ];

pkgs/llvm-ompss2/default.nix

@@ -11,9 +11,9 @@
 , ompss2rt ? null
 }:
 
-with lib;
-
 let
+  inherit (lib) assertMsg optional optionalString;
+
   usingNodesAndOmpv = (openmp.pname == "openmp-v" && ompss2rt.pname == "nodes");
   sameNosv = openmp.nosv == ompss2rt.nosv;
 in
@@ -38,7 +38,8 @@ let
   targetConfig = stdenv.targetPlatform.config;
   inherit gcc;
   cc = clangOmpss2Unwrapped;
-  gccVersion = with versions; let v = gcc.version; in concatStringsSep "." [(major v) (minor v) (patch v)];
+
+  gccVersion = with lib.versions; let v = gcc.version; in concatStringsSep "." [(major v) (minor v) (patch v)];
 
   extraBuildCommands = ''
     echo "-target ${targetConfig}" >> $out/nix-support/cc-cflags

pkgs/mcxx/default.nix

@@ -32,19 +32,22 @@ stdenv.mkDerivation rec {
 
   enableParallelBuilding = true;
 
-  buildInputs = [
+  nativeBuildInputs = [
     autoreconfHook
-    nanos6
-    gperf
+    bison
+    flex
     python3
     gfortran
     pkg-config
-    sqlite.dev
-    bison
-    flex
+    gperf
     gcc
   ];
 
+  buildInputs = [
+    nanos6
+    sqlite.dev
+  ];
+
   patches = [ ./intel.patch ];
 
   preConfigure = ''

pkgs/nanos6/default.nix

@@ -88,11 +88,19 @@ in
     dontStrip = enableDebug;
     separateDebugInfo = true;
 
-    buildInputs = [
+    nativeBuildInputs = [
       autoconf
       automake
       libtool
       pkg-config
+
+      # TODO: papi_version is needed for configure:
+      # ./configure: line 27378: papi_version: command not found
+      # This probably breaks cross-compilation
+      papi
+    ];
+
+    buildInputs = [
       boost
       numactl
       hwloc
@@ -104,7 +112,7 @@ in
     postInstall = ''
       mkdir -p $out/nix-support
       echo "export NANOS6_HOME=$out" >> $out/nix-support/setup-hook
-    ''; 
+    '';
 
     meta = with lib; {
       homepage = "https://github.com/bsc-pm/nanos6";

pkgs/osu/default.nix

@@ -24,9 +24,10 @@ stdenv.mkDerivation rec {
 
   doCheck = true;
   enableParallelBuilding = true;
+  nativeBuildInputs = [ mpiAll ];
   buildInputs = [ mpiAll ];
   hardeningDisable = [ "all" ];
-  configureFlags = [ 
+  configureFlags = [
       "CC=mpicc"
       "CXX=mpicxx"
   ];
@@ -40,7 +41,7 @@ stdenv.mkDerivation rec {
 
   meta = {
     description = "OSU Micro-Benchmarks";
-    homepage = http://mvapich.cse.ohio-state.edu/benchmarks/;
+    homepage = "http://mvapich.cse.ohio-state.edu/benchmarks/";
     maintainers = [ ];
     platforms = lib.platforms.all;
   };

pkgs/ovni/default.nix

@@ -13,8 +13,6 @@
 , useMpi ? (stdenv.buildPlatform.canExecute stdenv.hostPlatform)
 }:
 
-with lib;
-
 let
   release = rec {
     version = "1.12.0";
@@ -45,7 +43,7 @@ in
     postPatch = ''
       patchShebangs --build test/
     '';
-    nativeBuildInputs = [ cmake ];
+    nativeBuildInputs = [ cmake ] ++ lib.optionals (useMpi) [ mpi ];
     buildInputs = lib.optionals (useMpi) [ mpi ];
     cmakeBuildType = if (enableDebug) then "Debug" else "Release";
     cmakeFlags = [

pkgs/paraver/default.nix

@@ -1,25 +1,28 @@
 {
-  stdenv
-, fetchFromGitHub
-, autoreconfHook
-, boost
-, libxml2
-, xml2
-, wxGTK32
-, autoconf
-, automake
-, paraverKernel
-, openssl
-, glibcLocales
-, wrapGAppsHook
+  stdenv,
+  fetchFromGitHub,
+  autoreconfHook,
+  boost,
+  libxml2,
+  xml2,
+  wxGTK32,
+  autoconf,
+  automake,
+  paraverKernel,
+  openssl,
+  glibcLocales,
+  wrapGAppsHook,
+
+  enableDebug ? false,
 }:
 
 let
   wx = wxGTK32;
-in
-stdenv.mkDerivation rec {
-  pname = "wxparaver";
   version = "4.12.0";
+in
+stdenv.mkDerivation {
+  pname = "wxparaver";
+  inherit version;
 
   src = fetchFromGitHub {
     owner = "bsc-performance-tools";
@@ -36,21 +39,26 @@ stdenv.mkDerivation rec {
     ./fix-boost-87.patch
   ];
 
-  hardeningDisable = [ "all" ];
-
   # Fix the PARAVER_HOME variable
   postPatch = ''
     sed -i 's@^PARAVER_HOME=.*$@PARAVER_HOME='$out'@g' docs/wxparaver
     sed -i '1aexport LOCALE_ARCHIVE="${glibcLocales}/lib/locale/locale-archive"' docs/wxparaver
   '';
 
-  dontStrip = true;
   enableParallelBuilding = true;
 
-  preConfigure = ''
-    export CFLAGS="-O3"
-    export CXXFLAGS="-O3"
-  '';
+  hardeningDisable = [ "all" ];
+
+  dontStrip = true;
+
+  env =
+    let
+      flags = if enableDebug then "-ggdb -Og" else "-O3";
+    in
+    {
+      CFLAGS = flags;
+      CXXFLAGS = flags;
+    };
 
   configureFlags = [
     "--with-boost=${boost}"
@@ -60,19 +68,19 @@ stdenv.mkDerivation rec {
   ];
 
   nativeBuildInputs = [
+    autoconf
+    automake
+    autoreconfHook
     wrapGAppsHook
   ];
 
   buildInputs = [
-    autoreconfHook
     boost
-    libxml2.dev
+    libxml2
     xml2
     wx
-    autoconf
-    automake
     paraverKernel
-    openssl.dev
+    openssl
   ];
 
   postInstall = ''

pkgs/paraver/kernel.nix

@@ -1,19 +1,24 @@
 {
-  stdenv
-, fetchFromGitHub
-, autoreconfHook
-, boost
-, libxml2
-, xml2
-, autoconf
-, automake
-, pkg-config
-, zlib
+  stdenv,
+  fetchFromGitHub,
+  autoreconfHook,
+  boost,
+  libxml2,
+  xml2,
+  autoconf,
+  automake,
+  pkg-config,
+  zlib,
+
+  enableDebug ? false,
 }:
 
-stdenv.mkDerivation rec {
-  pname = "paraver-kernel";
+let
   version = "4.12.0";
+in
+stdenv.mkDerivation {
+  pname = "paraver-kernel";
+  inherit version;
 
   src = fetchFromGitHub {
     owner = "bsc-performance-tools";
@@ -34,24 +39,31 @@ stdenv.mkDerivation rec {
 
   dontStrip = true;
 
-  preConfigure = ''
-    export CFLAGS="-O3 -DPARALLEL_ENABLED"
-    export CXXFLAGS="-O3 -DPARALLEL_ENABLED"
-  '';
+  env =
+    let
+      flags = "-DPARALLEL_ENABLED " + (if enableDebug then "-ggdb -Og" else "-O3");
+    in
+    {
+      CFLAGS = flags;
+      CXXFLAGS = flags;
+    };
 
   configureFlags = [
     "--with-boost=${boost}"
     "--enable-openmp"
   ];
 
-  buildInputs = [
+  nativeBuildInputs = [
     autoreconfHook
-    boost
-    libxml2.dev
-    xml2
     autoconf
     automake
     pkg-config
+  ];
+
+  buildInputs = [
+    boost
+    libxml2.dev
+    xml2
     zlib
   ];
 }

pkgs/paraver/release.nix

@@ -61,13 +61,16 @@ stdenv.mkDerivation rec {
     "--with-wx-config=${wx}/bin/wx-config"
   ];
 
+  nativeBuildInputs = [
+    autoconf
+    automake
+  ];
+
   buildInputs = [
     boost
     xml2
     libxml2.dev
     wx
-    autoconf
-    automake
     openssl.dev
   ];
 

pkgs/sonar/default.nix

@@ -18,8 +18,12 @@ stdenv.mkDerivation rec {
   hardeningDisable = [ "all" ];
   dontStrip = true;
   configureFlags = [ "--with-ovni=${ovni}" ];
-  buildInputs = [
+
+  nativeBuildInputs = [
     autoreconfHook
+  ];
+
+  buildInputs = [
     ovni
     mpi
   ];

pkgs/tacuda/default.nix

@@ -0,0 +1,61 @@
+{ stdenv
+, lib
+, withCFlags
+, fetchFromGitHub
+, automake
+, autoconf
+, libtool
+, gnumake
+, autoreconfHook
+, boost
+
+, useGit ? false
+, gitUrl ? "git@gitlab-internal.bsc.es:task-awareness/tacuda/tacuda.git"
+, gitBranch ? "main"
+, gitCommit ? ""
+}:
+
+let
+  release = rec {
+    version = "2.1.0";
+    src = fetchFromGitHub {
+      owner = "bsc-pm";
+      repo = "tacuda";
+      rev = version;
+      hash = "";
+    };
+  };
+
+  git = rec {
+    version = src.shortRev;
+    src = builtins.fetchGit {
+      url = gitUrl;
+      ref = gitBranch;
+      rev = gitCommit;
+    };
+  };
+
+  source = if (useGit) then git else release;
+
+in
+
+stdenv.mkDerivation {
+  pname = "tacuda";
+  inherit (source) src version;
+
+  enableParallelBuilding = true;
+  separateDebugInfo = true;
+
+  nativeBuildInputs = [
+    autoreconfHook
+    automake
+    autoconf
+    libtool
+    gnumake
+  ];
+
+  buildInputs = [
+    boost
+  ];
+
+}

pkgs/tampi/default.nix

@@ -8,7 +8,6 @@
 , gnumake
 , boost
 , mpi
-, gcc
 , autoreconfHook
 , enableOvni ? true
 , ovni ? null
@@ -41,20 +40,23 @@ let
     };
   };
   source = if (useGit) then git else release;
-in stdenv.mkDerivation rec {
+in stdenv.mkDerivation {
   pname = "tampi";
   inherit (source) src version;
   enableParallelBuilding = true;
   separateDebugInfo = true;
-  buildInputs = [
-    autoreconfHook
-    automake
+
+  nativeBuildInputs = [
     autoconf
-    libtool
+    automake
+    autoreconfHook
     gnumake
+    libtool
+  ];
+
+  buildInputs = [
     boost
     mpi
-    gcc
   ] ++ optional (enableOvni) ovni;
   configureFlags = optional (enableOvni) "--with-ovni=${ovni}";
   dontDisableStatic = true;

pkgs/taopencl/default.nix

@@ -0,0 +1,46 @@
+{
+  stdenv
+, automake
+, autoconf
+, libtool
+, gnumake
+, boost
+, mpi
+, gcc
+, autoreconfHook
+, ocl-icd
+, opencl-headers
+}:
+
+stdenv.mkDerivation (finalAttrs: {
+  pname = "taopencl";
+  version = finalAttrs.src.shortRev;
+
+  src = builtins.fetchGit {
+    url = "git@gitlab-internal.bsc.es:task-awareness/taopencl/taopencl.git";
+    ref = "master";
+    rev = "c3b7b32ae8fa4af7ceff598532a881f8f1490aaf";
+  };
+
+  enableParallelBuilding = true;
+  separateDebugInfo = true;
+
+  configureFlags = [
+    "--with-opencl-lib=${ocl-icd}/lib"
+    "--with-opencl-include=${opencl-headers}/include"
+  ];
+
+  buildInputs = [
+    autoreconfHook
+    automake
+    autoconf
+    libtool
+    gnumake
+    boost
+    mpi
+    gcc
+  ];
+
+  dontDisableStatic = true;
+  hardeningDisable = [ "all" ];
+})