Move apps to garlic

bsc/apps/cpic/default.nix

@@ -1,41 +0,0 @@
-{
-  stdenv
-, libconfig
-, nanos6
-, mpi
-, uthash
-, fftw
-, tampi
-, hdf5
-}:
-
-stdenv.mkDerivation rec {
-  name = "cpic";
-
-  # Use my current cpic version, so I can test changes without commits
-  #src = /home/Computational/rarias/cpic;
-
-  src = builtins.fetchGit {
-    url = "https://github.com/rodarima/cpic";
-#    rev = "73bd70448587f0925b89e24c8f17e412ea3958e6";
-    ref = "simd";
-  };
-
-  enableParallelBuilding = true;
-  dontStrip = true;
-
-  buildInputs = [
-    libconfig
-    nanos6
-    mpi
-    uthash
-    fftw
-    tampi
-    hdf5
-  ];
-
-  installPhase = ''
-    mkdir -p $out/bin
-    cp cpic $out/bin/cpic
-  '';
-}

bsc/apps/creams/default.nix

@@ -1,38 +0,0 @@
-{
-  stdenv
-, nanos6
-, mpi
-, tampi
-, mcxx
-, icc
-}:
-
-stdenv.mkDerivation rec {
-  name = "creams";
-
-  src = builtins.fetchGit {
-    url = "ssh://git@bscpm02.bsc.es/pmartin1/creams-simplified.git";
-    ref = "MPI+OmpSs-2+TAMPI";
-  };
-
-  buildInputs = [
-    nanos6
-    mpi
-    icc
-    tampi
-    mcxx
-  ];
-
-  hardeningDisable = [ "all" ];
-
-  configurePhase = ''
-    export TAMPI_HOME=${tampi}
-    . etc/bashrc
-  '';
-
-  installPhase = ''
-    mkdir -p $out/bin
-    cp -a build/* $out/bin
-  '';
-
-}

bsc/apps/fwi/default.nix

@@ -1,52 +0,0 @@
-{
-  stdenv
-, nanos6
-, mpi
-, tampi
-, mcxx
-, icc
-}:
-
-stdenv.mkDerivation rec {
-  name = "nbody";
-  variant = "4_MPI_ompss";
-
-  src = builtins.fetchGit {
-    url = "https://gitlab.com/srodrb/BSC-FWI.git";
-    ref = "ompss-mpi-nocache";
-  };
-
-  postUnpack = "sourceRoot=$sourceRoot/${variant}";
-
-  enableParallelBuilding = true;
-
-  buildInputs = [
-    nanos6
-    mpi
-    icc
-    tampi
-    mcxx
-  ];
-
-  # FIXME: This is an ugly hack.
-  # When using _GNU_SOURCE or any other definition used in features.h, we need
-  # to define them before mcc includes nanos6.h from the command line. So the
-  # only chance is by setting it at the command line with -D. Using the DEFINES
-  # below, reaches the command line of the preprocessing stage with gcc.
-  preBuild = ''
-    export DEFINES=-D_GNU_SOURCE
-  '';
-
-  makeFlags = [
-    "NZF=108"
-    "NXF=108"
-    "NYF=208"
-    "PRECISION=float"
-  ];
-
-  installPhase = ''
-    mkdir -p $out/bin
-    cp fwi.* $out/bin
-    cp ModelGenerator $out/bin
-  '';
-}

bsc/apps/heat/default.nix

@@ -1,32 +0,0 @@
-{
-  stdenv
-, nanos6
-, mpi
-, tampi
-, mcxx
-, icc
-}:
-
-stdenv.mkDerivation rec {
-  name = "heat";
-
-  src = builtins.fetchGit {
-    url = "ssh://git@bscpm02.bsc.es/benchmarks/ompss-2/heat-conflict-kevin.git";
-    #rev = "25fde23e5ad5f5e2e58418ed269bc2b44642aa17";
-    ref = "master";
-  };
-
-  buildInputs = [
-    nanos6
-    mpi
-    icc
-    tampi
-    mcxx
-  ];
-
-  installPhase = ''
-    mkdir -p $out/bin
-    cp heat_* $out/bin/
-  '';
-
-}

bsc/apps/hpccg/default.nix

@@ -1,44 +0,0 @@
-{
-  stdenv
-, nanos6
-, mpi
-, mcxx
-, tampi
-, icc
-}:
-
-stdenv.mkDerivation rec {
-  name = "hpccg";
-
-  src = builtins.fetchGit {
-    url = "ssh://git@bscpm02.bsc.es/mmaronas/HPCCG.git";
-    ref = "mmaronas-development";
-  };
-
-  buildInputs = [
-    nanos6
-    mpi
-    icc
-    tampi
-    mcxx
-  ];
-
-  # The hpccg app fails to compile in parallel. Makefile must be fixed before.
-  enableParallelBuilding = false;
-
-  postPatch = ''
-    sed -i 's/mpic++/mpiicpc/g' Makefile
-    sed -i 's/g++/icpc/g' Makefile
-    mkdir obj
-  '';
-
-  makeFlags =  [
-    "USE_MPI=-DUSING_MPI"
-    "TAMPI_HOME=${tampi}"
-  ];
-
-  installPhase = ''
-    mkdir -p $out/bin
-    cp test_HPCCG* $out/bin
-  '';
-}

bsc/apps/hpcg/default.nix

@@ -1,46 +0,0 @@
-{
-  stdenv
-, nanos6
-, mpi
-, mcxx
-, tampi
-, icc
-}:
-
-stdenv.mkDerivation rec {
-  name = "hpcg";
-
-  src = builtins.fetchGit {
-    url = "ssh://git@bscpm02.bsc.es/rpenacob/hpcg.git";
-    ref = "symgs_coloring_more_than_one_block_per_task_halos_blocking_discreete";
-  };
-
-  prePatch = ''
-    #export NIX_DEBUG=6
-  '';
-
-  patches = [ ./tampi.patch ];
-
-  buildInputs = [
-    nanos6
-    mpi
-    icc
-    tampi
-    mcxx
-  ];
-
-  enableParallelBuilding = true;
-
-  configurePhase = ''
-    export TAMPI_HOME=${tampi}
-    mkdir build
-    cd build
-    ../configure MPI_ICPC_OSS
-  '';
-
-  installPhase = ''
-    mkdir -p $out/bin
-    cp bin/* $out/bin/
-  '';
-
-}

bsc/apps/hpcg/tampi.patch

@@ -1,13 +0,0 @@
---- a/setup/Make.MPI_ICPC_OSS	2020-07-13 16:02:33.272257865 +0200
-+++ b/setup/Make.MPI_ICPC_OSS	2020-07-13 16:04:34.344413390 +0200
-@@ -91,8 +91,8 @@
- # - HPCG includes / libraries / specifics -------------------------------
- # ----------------------------------------------------------------------
- #
--HPCG_INCLUDES = -I$(INCdir) -I$(INCdir)/$(arch) $(MPinc) -I{TAMPI_HOME}/include
--HPCG_LIBS     = ${TAMPI_HOME}/lib/libtampi.a
-+HPCG_INCLUDES = -I$(INCdir) -I$(INCdir)/$(arch) $(MPinc) -I$(TAMPI_HOME)/include
-+HPCG_LIBS     = -l:libtampi.a 
- #
- # - Compile time options -----------------------------------------------
- #

bsc/apps/lulesh/default.nix

@@ -1,31 +0,0 @@
-{
-  stdenv
-, mpi
-, mcxx
-, icc
-}:
-
-stdenv.mkDerivation rec {
-  name = "lulesh";
-
-  src = builtins.fetchGit {
-    url = "ssh://git@bscpm02.bsc.es/mmaronas/lulesh.git";
-    ref = "master";
-  };
-
-  dontConfigure = true;
-
-  buildInputs = [
-    mpi
-    icc
-    mcxx
-  ];
-
-  enableParallelBuilding = true;
-
-  installPhase = ''
-    mkdir -p $out/bin
-    find . -name 'lulesh*' -type f -executable -exec cp \{\} $out/bin/ \;
-  '';
-
-}